BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0755c Length=645 Score E Sequences producing significant alignments: (Bits) Value gi|289553012|ref|ZP_06442222.1| predicted protein [Mycobacterium... 1170 0.0 gi|15840169|ref|NP_335206.1| PPE family protein [Mycobacterium t... 1169 0.0 gi|57116777|ref|YP_177753.1| PPE family protein [Mycobacterium t... 1169 0.0 gi|31791942|ref|NP_854435.1| PPE family protein [Mycobacterium b... 1168 0.0 gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacteriu... 968 0.0 gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium... 954 0.0 gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacteri... 937 0.0 gi|289446319|ref|ZP_06436063.1| PPE family protein [Mycobacteriu... 914 0.0 gi|289749264|ref|ZP_06508642.1| PPE family protein [Mycobacteriu... 487 3e-135 gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacteriu... 462 9e-128 gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium t... 461 1e-127 gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tu... 460 3e-127 gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacteriu... 460 5e-127 gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacteriu... 459 5e-127 gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacteriu... 459 5e-127 gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacteriu... 459 6e-127 gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacteri... 458 1e-126 gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium ... 458 1e-126 gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium t... 457 2e-126 gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacteriu... 457 2e-126 gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacteriu... 457 2e-126 gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacteriu... 456 9e-126 gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacteri... 451 2e-124 gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium b... 446 7e-123 gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacteri... 434 3e-119 gi|240171042|ref|ZP_04749701.1| PPE family protein, PPE8 [Mycoba... 426 7e-117 gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacteri... 408 1e-111 gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium t... 407 2e-111 gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacteri... 406 7e-111 gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacteriu... 405 8e-111 gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacteriu... 405 1e-110 gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacteri... 396 7e-108 gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacteriu... 395 1e-107 gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium t... 394 3e-107 gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacteriu... 393 5e-107 gi|183984190|ref|YP_001852481.1| PPE family protein [Mycobacteri... 393 5e-107 gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacteriu... 391 3e-106 gi|148822348|ref|YP_001287102.1| PPE family protein [Mycobacteri... 389 1e-105 gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacteri... 388 2e-105 gi|340626147|ref|YP_004744599.1| PPE family protein [Mycobacteri... 387 3e-105 gi|31792329|ref|NP_854822.1| PPE family protein [Mycobacterium b... 387 3e-105 gi|289569131|ref|ZP_06449358.1| PPE family protein [Mycobacteriu... 387 4e-105 gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacteri... 382 9e-104 gi|240172871|ref|ZP_04751530.1| PPE family protein [Mycobacteriu... 381 2e-103 gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 381 2e-103 gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacteri... 377 4e-102 gi|15841868|ref|NP_336905.1| PPE family protein [Mycobacterium t... 370 3e-100 gi|253798566|ref|YP_003031567.1| PPE family protein [Mycobacteri... 368 2e-99 gi|254365133|ref|ZP_04981179.1| PPE family protein [Mycobacteriu... 367 3e-99 gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacteri... 367 4e-99 >gi|289553012|ref|ZP_06442222.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437644|gb|EFD20137.1| predicted protein [Mycobacterium tuberculosis KZN 605] Length=655 Score = 1170 bits (3027), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/645 (100%), Positives = 645/645 (100%), Gaps = 0/645 (0%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 11 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 70 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 71 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 130 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 131 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 190 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 191 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 250 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 251 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 310 Query 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS Sbjct 311 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 370 Query 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS Sbjct 371 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 430 Query 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG Sbjct 431 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 490 Query 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF Sbjct 491 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 550 Query 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG Sbjct 551 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 610 Query 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 611 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 655 >gi|15840169|ref|NP_335206.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253797700|ref|YP_003030701.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289744479|ref|ZP_06503857.1| predicted protein [Mycobacterium tuberculosis 02_1987] 34 more sequence titles Length=646 Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/645 (100%), Positives = 645/645 (100%), Gaps = 0/645 (0%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 2 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 61 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 62 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 121 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 122 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 181 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 182 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 241 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 242 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 301 Query 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS Sbjct 302 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 361 Query 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS Sbjct 362 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 421 Query 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG Sbjct 422 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 481 Query 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF Sbjct 482 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 541 Query 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG Sbjct 542 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 601 Query 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 602 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 646 >gi|57116777|ref|YP_177753.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148660531|ref|YP_001282054.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148821960|ref|YP_001286714.1| PPE family protein [Mycobacterium tuberculosis F11] 19 more sequence titles Length=645 Score = 1169 bits (3024), Expect = 0.0, Method: Compositional matrix adjust. Identities = 645/645 (100%), Positives = 645/645 (100%), Gaps = 0/645 (0%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 Query 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS Sbjct 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 Query 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS Sbjct 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 Query 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG Sbjct 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 Query 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF Sbjct 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 Query 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG Sbjct 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 Query 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 >gi|31791942|ref|NP_854435.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121636678|ref|YP_976901.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989150|ref|YP_002643837.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 10 more sequence titles Length=645 Score = 1168 bits (3021), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/645 (99%), Positives = 645/645 (100%), Gaps = 0/645 (0%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 Query 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS Sbjct 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 Query 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS Sbjct 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 Query 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG Sbjct 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 Query 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF Sbjct 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 Query 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 NNSG+GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG Sbjct 541 NNSGKGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTG 600 Query 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 601 FLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 >gi|289568706|ref|ZP_06448933.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542460|gb|EFD46108.1| PPE family protein [Mycobacterium tuberculosis T17] Length=656 Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust. Identities = 635/655 (97%), Positives = 638/655 (98%), Gaps = 10/655 (1%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 2 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 61 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 62 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 121 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 122 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 181 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 182 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 241 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 242 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 301 Query 301 GNVGIGNGGNGNFGG----------GNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGN 350 GNVGIGNGGNGNFGG GN G+ N+G GN G N GFGNSGSYNFGFGNTGN Sbjct 302 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGN 361 Query 351 NNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANS 410 NNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANS Sbjct 362 NNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANS 421 Query 411 GNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNS 470 GNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNS Sbjct 422 GNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNS 481 Query 471 GAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGF 530 GAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGF Sbjct 482 GAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGF 541 Query 531 GNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFS 590 GNAGSGNSGFNNSG+GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFS Sbjct 542 GNAGSGNSGFNNSGKGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFS 601 Query 591 GFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 GFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 602 GFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 656 >gi|289442157|ref|ZP_06431901.1| predicted protein [Mycobacterium tuberculosis T46] gi|289415076|gb|EFD12316.1| predicted protein [Mycobacterium tuberculosis T46] Length=649 Score = 954 bits (2465), Expect = 0.0, Method: Compositional matrix adjust. Identities = 628/649 (97%), Positives = 632/649 (98%), Gaps = 10/649 (1%) Query 7 LPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM 66 +PPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM Sbjct 1 MPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM 60 Query 67 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV 126 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV Sbjct 61 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV 120 Query 127 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNL 186 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNL Sbjct 121 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNL 180 Query 187 NVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGP 246 NVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGP Sbjct 181 NVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGP 240 Query 247 SSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIG 306 SSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIG Sbjct 241 SSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIG 300 Query 307 NGGNGNFGG----------GNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIG 356 NGGNGNFGG GN G+ N+G GN G N GFGNSGSYNFGFGNTGNNNIGIG Sbjct 301 NGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGNNNIGIG 360 Query 357 LTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTG 416 LTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTG Sbjct 361 LTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTG 420 Query 417 FGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSG 476 FGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSG Sbjct 421 FGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSG 480 Query 477 SFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSG 536 SFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSG Sbjct 481 SFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSG 540 Query 537 NSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGF 596 NSGFNNSG+GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGF Sbjct 541 NSGFNNSGKGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGF 600 Query 597 GNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 GNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 601 GNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 649 >gi|340625774|ref|YP_004744226.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340003964|emb|CCC43099.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=646 Score = 937 bits (2422), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/646 (92%), Positives = 610/646 (95%), Gaps = 1/646 (0%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MV FAWLPPETNSLRMYLGAGS+PLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 1 MVSFAWLPPETNSLRMYLGAGSQPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMA+ AGPYASWL AAGAQAELAA QARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 61 PASAAMASVAGPYASWLIAAGAQAELAAGQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAME+TYEQMWAQDVA MAGYHAASSA AAQL SWQ ALPNINLG+ Sbjct 121 LAVSNVFGQNAPAIAAMEATYEQMWAQDVAAMAGYHAASSAVAAQLTSWQQALPNINLGL 180 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGN GNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 181 GNIGNLNVGNGNTGDYNLGNGNFGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 N GIGPSSFNVGSGNIGNANVG GNSGDNN GFGN GN NIGIGNAGPN SPA PTPGN Sbjct 241 NAGIGPSSFNVGSGNIGNANVGSGNSGDNNVGFGNLGNGNIGIGNAGPNTGSPATPTPGN 300 Query 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGS 360 GNVG+GNGGNGNFGGGNTGNANIGLGNVG+GNVGFGNSGS+NFG GNTG NNIGIGLTGS Sbjct 301 GNVGVGNGGNGNFGGGNTGNANIGLGNVGNGNVGFGNSGSHNFGLGNTGTNNIGIGLTGS 360 Query 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS Sbjct 361 NQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNS 420 Query 421 GFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNG 480 G INTGFGNA +VNTGF NSG ANTGIGNAGD+NTGNFNGGIINTGSFNSGAFNSGSFNG Sbjct 421 GLINTGFGNASTVNTGFANSGGANTGIGNAGDYNTGNFNGGIINTGSFNSGAFNSGSFNG 480 Query 481 GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF 540 G+ANSGF NSGLTNTGFANSGNINTGGFNAGNLNTGFGNT DG GENSGFGN GSGNSGF Sbjct 481 GNANSGFFNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTADGPGENSGFGNTGSGNSGF 540 Query 541 NNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFS-GFMSGFGNT 599 NNSG+GNSGA N+G LQISGF NSGQSV+GYNNS ++ SGFGNKGTG F+ GF+SGFGNT Sbjct 541 NNSGKGNSGAYNLGTLQISGFGNSGQSVSGYNNSGNIISGFGNKGTGSFNLGFISGFGNT 600 Query 600 GFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 G LQSGFGNL+A+PD+NSA SGFGNSGKQDSGGFN+IDFVSGFFHR Sbjct 601 GELQSGFGNLDADPDSNSAASGFGNSGKQDSGGFNTIDFVSGFFHR 646 >gi|289446319|ref|ZP_06436063.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289419277|gb|EFD16478.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=640 Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust. Identities = 616/627 (99%), Positives = 618/627 (99%), Gaps = 0/627 (0%) Query 19 GAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAMANAAGPYASWLT 78 G G + GAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAMANAAGPYASWLT Sbjct 14 GCGVTATIGGGGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAMANAAGPYASWLT 73 Query 79 AAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNVFGQNAPAIAAME 138 AAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNVFGQNAPAIAAME Sbjct 74 AAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNVFGQNAPAIAAME 133 Query 139 STYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNLNVGNGNTGDYNL 198 STYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNLNVGNGNTGDYNL Sbjct 134 STYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNLNVGNGNTGDYNL 193 Query 199 GNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGN 258 GNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGN Sbjct 194 GNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGN 253 Query 259 ANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNT 318 ANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNT Sbjct 254 ANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNT 313 Query 319 GNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFG 378 GNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGF Sbjct 314 GNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFS 373 Query 379 NSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFG 438 NSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFG Sbjct 374 NSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFG 433 Query 439 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA 498 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA Sbjct 434 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA 493 Query 499 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQI 558 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSG+GNSGAQNVGNLQI Sbjct 494 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGKGNSGAQNVGNLQI 553 Query 559 SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSA 618 SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSA Sbjct 554 SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSA 613 Query 619 TSGFGNSGKQDSGGFNSIDFVSGFFHR 645 TSGFGNSGKQDSGGFNSIDFVSGFFHR Sbjct 614 TSGFGNSGKQDSGGFNSIDFVSGFFHR 640 >gi|289749264|ref|ZP_06508642.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289689851|gb|EFD57280.1| PPE family protein [Mycobacterium tuberculosis T92] Length=377 Score = 487 bits (1253), Expect = 3e-135, Method: Compositional matrix adjust. Identities = 355/375 (95%), Positives = 357/375 (96%), Gaps = 10/375 (2%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG Sbjct 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL Sbjct 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV Sbjct 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV 180 Query 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG Sbjct 181 GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNG 240 Query 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN Sbjct 241 NVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGN 300 Query 301 GNVGIGNGGNGNFGG----------GNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGN 350 GNVGIGNGGNGNFGG GN G+ N+G GN G N GFGNSGSYNFGFGNTGN Sbjct 301 GNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNFGFGNTGN 360 Query 351 NNIGIGLTGSNQIGF 365 NNIGIGLTGSNQIG Sbjct 361 NNIGIGLTGSNQIGL 375 Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust. Identities = 75/196 (39%), Positives = 87/196 (45%), Gaps = 55/196 (28%) Query 310 NGNFGGGNTGNANIGLGNVGD-----------------GNVGFGNSGSYNFGFGNTGNNN 352 N N G GN GN N+G GN GD G+ G S+N G GN GN N Sbjct 175 NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFN 234 Query 353 IGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIG-----FFNSGSGNFGVGNSGVTNTGV 407 +G G G+ IG N GSGNIG N G GN G F N G+ N G+GN+G + Sbjct 235 LGSG-NGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSP 293 Query 408 A--------------------------------NSGNINTGFGNSGFINTGFGNALSVNT 435 A N G+ N GFGNSG N GFGN+ S N Sbjct 294 AVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNSGSYNF 353 Query 436 GFGNSGQANTGIGNAG 451 GFGN+G N GIG G Sbjct 354 GFGNTGNNNIGIGLTG 369 Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust. Identities = 95/203 (47%), Positives = 111/203 (55%), Gaps = 11/203 (5%) Query 320 NANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGN 379 N N+G+GN+G+ NVG GN+G YN G GN GN N G G + N GSGNIG N Sbjct 175 NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFN 234 Query 380 SGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGN 439 G+GN GN G+G S N G N GN N G GNSG N GFGN + N G GN Sbjct 235 LGSGN--------GNVGIGPSSF-NVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGN 285 Query 440 SG--QANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGF 497 +G ++ + G+ N G NGG N G N+G N G N GD N GF NSG N GF Sbjct 286 AGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGF 345 Query 498 ANSGNINTGGFNAGNLNTGFGNT 520 NSG+ N G N GN N G G T Sbjct 346 GNSGSYNFGFGNTGNNNIGIGLT 368 Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust. Identities = 85/204 (42%), Positives = 112/204 (55%), Gaps = 33/204 (16%) Query 292 SPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL-----------------GNVGDGNVG 334 PA+P N N+G+GN GN N G GNTG+ N+G G + NVG Sbjct 170 QPALP---NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVG 226 Query 335 FGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGN 394 GN G++N G +GN N+GIG + N +G G N G+ N+G GNSG N GF N G+ N Sbjct 227 SGNIGNFNLG---SGNGNVGIGPSSFN-VGSG--NIGNANVGGGNSGDNNFGFGNFGNAN 280 Query 395 FGVGNSG--VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGD 452 G+GN+G +++ V GN N G GN G N G GN + N G GN G N G GN+G Sbjct 281 IGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGS 340 Query 453 F-----NTGNFNGGIINTGSFNSG 471 + N+G++N G NTG+ N G Sbjct 341 YNFGFGNSGSYNFGFGNTGNNNIG 364 >gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=681 Score = 462 bits (1189), Expect = 9e-128, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 432/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +LH+AA+SF +VTS+LA G+WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLHSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 243 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 291 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 292 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 339 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 340 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 399 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 400 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 459 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 460 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 519 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NS NINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 520 TGDFNSGNVNTGYFNSDNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 579 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 635 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 636 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 681 >gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C] 9 more sequence titles Length=760 Score = 461 bits (1187), Expect = 1e-127, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 432/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 82 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 141 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 142 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 201 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 202 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 261 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 262 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 321 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 322 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 370 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 371 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 418 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 419 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 478 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 479 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 538 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 539 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 598 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 599 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 658 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 659 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 714 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 715 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 760 >gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=679 Score = 460 bits (1184), Expect = 3e-127, Method: Compositional matrix adjust. Identities = 356/718 (50%), Positives = 432/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 M+ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 241 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 289 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 290 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 337 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 338 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 397 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 398 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 457 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 458 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 517 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 518 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 577 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 578 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 633 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 634 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 679 >gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=681 Score = 460 bits (1183), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 432/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 243 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 291 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 292 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 339 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 340 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 399 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 400 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 459 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 460 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 519 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 520 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 579 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 635 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 636 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 681 >gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010] Length=679 Score = 459 bits (1182), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 431/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 M+ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N SGN GN+G S+N+G GN+G+ N+G Sbjct 241 GN-------IGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 289 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 290 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 337 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 338 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 397 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 398 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 457 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 458 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 517 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 518 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 577 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 578 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 633 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 634 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 679 >gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=679 Score = 459 bits (1182), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 431/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 M+ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 1 MMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 61 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 121 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 180 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 181 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 240 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 241 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 289 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 290 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 337 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 338 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 397 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 398 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 457 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 458 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 517 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 518 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 577 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N ++G+ NSV +G N Sbjct 578 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVDDHLSGFRNSVPTITGTAN--- 633 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 634 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 679 >gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=687 Score = 459 bits (1181), Expect = 6e-127, Method: Compositional matrix adjust. Identities = 355/718 (50%), Positives = 432/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 9 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 68 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 69 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 128 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 129 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 188 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 189 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 248 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 249 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 297 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 298 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 345 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 346 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 405 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 406 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 465 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 466 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 525 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 526 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 585 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 586 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 641 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 642 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 687 >gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=678 Score = 458 bits (1179), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 354/715 (50%), Positives = 432/715 (61%), Gaps = 113/715 (15%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA++F +VTS+LA G+WQGPAS Sbjct 3 FSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAAAFSAVTSQLATGSWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM A YA WLT A AQAE AA QA+AA AFEEALA VHP V ANR R L Sbjct 63 AAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEEALAATVHPGAVSANRGRLRSLVA 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA----------- 172 SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 SNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGAV 182 Query 173 -------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 L + NLG+GN+G+ N+G+ NTG NLG+ N+G+ N G GN Sbjct 183 IIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNLGSANTGSVNLGSANIGDLNLGSGN- 241 Query 214 SAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVGGGN 265 I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G GN Sbjct 242 ------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLGSGN 291 Query 266 SGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 +GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N G Sbjct 292 TGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTNFGS 339 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI 385 GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG GNI Sbjct 340 GNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNI 399 Query 386 GFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFGNAL 431 GFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ N+ Sbjct 400 GFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSA 459 Query 432 SVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDANSGF 487 + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N+G Sbjct 460 TTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGD 519 Query 488 LNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAGSGN 537 NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG+ N Sbjct 520 FNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFN 579 Query 538 SGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLF 589 SGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 SGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN------ 632 Query 590 SGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 633 ---ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 678 >gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] 23 more sequence titles Length=678 Score = 458 bits (1178), Expect = 1e-126, Method: Compositional matrix adjust. Identities = 355/715 (50%), Positives = 430/715 (61%), Gaps = 113/715 (15%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQGPAS Sbjct 3 FSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R L Sbjct 63 AAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSLVA 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA----------- 172 SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 SNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGAV 182 Query 173 -------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G GN Sbjct 183 IIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSGN- 241 Query 214 SAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVGGGN 265 I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G GN Sbjct 242 ------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLGSGN 291 Query 266 SGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 +GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N G Sbjct 292 TGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTNFGS 339 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI 385 GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG GNI Sbjct 340 GNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNI 399 Query 386 GFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFGNAL 431 GFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ N+ Sbjct 400 GFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSA 459 Query 432 SVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDANSGF 487 + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N+G Sbjct 460 TTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGD 519 Query 488 LNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAGSGN 537 NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG+ N Sbjct 520 FNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFN 579 Query 538 SGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLF 589 SGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 SGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN------ 632 Query 590 SGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 633 ---ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 678 >gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21 gi|38684031|emb|CAE55401.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=678 Score = 457 bits (1176), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 354/715 (50%), Positives = 429/715 (60%), Gaps = 113/715 (15%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQGPAS Sbjct 3 FSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R L Sbjct 63 AAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSLVA 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA----------- 172 SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 SNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGAV 182 Query 173 -------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G GN Sbjct 183 IIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSGN- 241 Query 214 SAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVGGGN 265 I S+N+G GN G+ N SGN GN+G S+N+G GN+G+ N+G GN Sbjct 242 ------IGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLGSGN 291 Query 266 SGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 +GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N G Sbjct 292 TGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTNFGS 339 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI 385 GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG GNI Sbjct 340 GNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNI 399 Query 386 GFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFGNAL 431 GFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ N+ Sbjct 400 GFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSA 459 Query 432 SVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDANSGF 487 + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N+G Sbjct 460 TTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGD 519 Query 488 LNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAGSGN 537 NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG+ N Sbjct 520 FNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFN 579 Query 538 SGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLF 589 SGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 SGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN------ 632 Query 590 SGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 633 ---ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 678 >gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009] Length=681 Score = 457 bits (1176), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 354/718 (50%), Positives = 431/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G Sbjct 243 GN-------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 291 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 292 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 339 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 340 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 399 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 400 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 459 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 460 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 519 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 520 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 579 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N ++G+ NSV +G N Sbjct 580 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVDDHLSGFRNSVPTITGTAN--- 635 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 636 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 681 >gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=681 Score = 457 bits (1176), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 354/718 (50%), Positives = 431/718 (61%), Gaps = 113/718 (15%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQG Sbjct 3 VMNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQG 62 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PASAAM A YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R Sbjct 63 PASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRS 122 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------- 172 L SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 LVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPG 182 Query 173 ----------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G Sbjct 183 GAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGS 242 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVG 262 GN I S+N+G GN G+ N SGN GN+G S+N+G GN+G+ N+G Sbjct 243 GN-------IGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLG 291 Query 263 GGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNAN 322 GN+GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N Sbjct 292 SGNTGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTN 339 Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 G GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG Sbjct 340 FGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGN 399 Query 383 GNIGFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFG 428 GNIGFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ Sbjct 400 GNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWF 459 Query 429 NALSVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDAN 484 N+ + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N Sbjct 460 NSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMN 519 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAG 534 +G NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG Sbjct 520 TGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAG 579 Query 535 SGNSGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGT 586 + NSGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 TFNSGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN--- 635 Query 587 GLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 636 ------ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 681 >gi|240171043|ref|ZP_04749702.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=600 Score = 456 bits (1172), Expect = 9e-126, Method: Compositional matrix adjust. Identities = 360/649 (56%), Positives = 422/649 (66%), Gaps = 59/649 (9%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS R++ GAG+ P+L+AA AWD LA EL AAASSFGSVT+ELAG +W GPA+ Sbjct 3 FSMLPPELNSARIFAGAGTAPMLSAAAAWDRLANELSAAASSFGSVTAELAGQSWHGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA AA PY +WLT A A AA + R AA +E A A VHP +V ANR R L Sbjct 63 AAMAAAATPYTAWLTTAATAAAEAAGRGRIAAAGYEAARAATVHPMLVAANRSRLVSLVW 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 183 SNVFGQNAPAIAA+E+ YEQMWAQD A M+GYHA +SA AAQ LP INLG+GNI Sbjct 123 SNVFGQNAPAIAAIEACYEQMWAQDAAAMSGYHALASAVAAQ-------LPQINLGLGNI 175 Query 184 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGN-V 242 G+LN+G+GNTGD+NLG+GN+GN N G GN + N+GSGN GN NLGSGNGN + Sbjct 176 GSLNMGSGNTGDFNLGSGNIGNTNLGSGN-------FGNTNLGSGNFGNSNLGSGNGNFL 228 Query 243 GIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGN 302 ++FNVGSGN G+ NVG GNSG + + GNAN+G GN G N Sbjct 229 DAVQANFNVGSGNNGSYNVGFGNSGAGS----SAGNANVGNGNLGSQ------------N 272 Query 303 VGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQ 362 G GN G+ N G GN GN N G GN GD N G GNSG+ N GFGNTGN NIGIGLTG +Q Sbjct 273 FGNGNNGSQNVGSGNNGNVNTGYGNTGDRNWGLGNSGNNNIGFGNTGNGNIGIGLTGDDQ 332 Query 363 IGF---GGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGN 419 G G LNSGSGNIG NSGTGNIGFFNSGSGN G+ NSG++N G+ANSG ++TG N Sbjct 333 RGINLTGWLNSGSGNIGLFNSGTGNIGFFNSGSGNVGIANSGLSNYGIANSGQVDTGLWN 392 Query 420 SGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFN 479 SG NTG N+G G G NTG GN G NTG NGG N GSFNSG N+G FN Sbjct 393 SGDTNTGI-----ANSGSGAFGGVNTGFGNGGYHNTGFANGGSFNAGSFNSGNHNTGGFN 447 Query 480 GGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSG 539 G N+G+ NSG NTG ANSG INTG FNAG LNTG G++ D G +SGFGN+G+G+SG Sbjct 448 SGFINTGYFNSGPLNTGLANSGGINTGLFNAGELNTGLGSSADQPGPSSGFGNSGAGSSG 507 Query 540 FNNSGRGNSGAQNVGNLQI-SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGN 598 F N G +SG NV L + SGF N G G + TG F+ +GFG Sbjct 508 FFNDGVNSSGIGNVSGLGLDSGFWNRGG---------------GGRATGFFNA-GAGFGV 551 Query 599 TGFLQSGFGNLEA---NPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 TGF SG G L + N + + SG N+G SGGFN+ SGFF Sbjct 552 TGFFNSGSGALSSGFFNSGDTGSNSGLHNTGGNSSGGFNTGTGQSGFFR 600 >gi|183981319|ref|YP_001849610.1| PPE family protein [Mycobacterium marinum M] gi|183174645|gb|ACC39755.1| PPE family protein [Mycobacterium marinum M] Length=694 Score = 451 bits (1160), Expect = 2e-124, Method: Compositional matrix adjust. Identities = 350/704 (50%), Positives = 426/704 (61%), Gaps = 75/704 (10%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ +PPE NS+ M+ GAGS P+L AA W L+ EL +AA+ F S+TS L G WQG A+ Sbjct 3 FSVMPPEINSVLMFAGAGSEPMLLAARGWSELSAELQSAAAGFASLTSGLTGQFWQGAAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AM A YA+ L+A AQA + QA A F+ A A +VHP V ANR + L V Sbjct 63 QAMTGVAQAYAAHLSATAAQAGQVSAQANGVAAVFDAARAAIVHPLQVAANRTQLVSLVV 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA-------LPN- 175 SN+FGQNAPAIAA+E+ YE+MWAQDV+ M+GY+ A+SAA AQL W+ LP+ Sbjct 123 SNLFGQNAPAIAAVEANYEEMWAQDVSAMSGYYTAASAAVAQLTPWELTSEGIVIPLPDH 182 Query 176 ---INLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGN---------------GSAFH 217 +N GNIG+LN+G GN GD NLG+GN G N G GN G + Sbjct 183 IGVLNFTPGNIGSLNLGIGNVGDLNLGSGNTGAGNLGLGNFGELNLGSGNGNSGNGDSTT 242 Query 218 GQISSFNVGSGNIGNFNLGSGN-GNVGIG---PSSFNVGSGNIGNANVGGGNSGDNNFGF 273 ++SFN+GSGN+G+ NLGSGN G + +G N G GNIG+ N+G GN G +NFG Sbjct 243 PLLASFNLGSGNLGDANLGSGNLGMLNLGSGNKGDTNFGFGNIGDLNLGSGNIGSHNFGS 302 Query 274 GNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNV 333 GN G+AN+G GN GN N G+GN G+ N G GNTG+AN G GN+GD NV Sbjct 303 GNSGSANLGSGNT------------GNSNFGLGNTGSTNLGSGNTGSANFGSGNLGDANV 350 Query 334 GFGNSGSYNFGFGNTGNNNIGIGLTGSNQIG--FGGLNSGSGNIGFGNSGTGNIGFFNSG 391 G+GN GS+NFGFGN G+NNIGIGLTG NQIG FG LNSG GNIG NSG N+GFFNSG Sbjct 351 GWGNLGSHNFGFGNNGSNNIGIGLTGDNQIGINFGALNSGHGNIGLFNSGNDNVGFFNSG 410 Query 392 SGNFGVGNSGV--------------TNTGVANSGNINTGFGNSGFINTGFGNALSVNTGF 437 N G+ NSG+ N+GV +SG +NTG+GNSG NTG+ NA NTG Sbjct 411 DKNIGIANSGLGVGPLSTEFFTSGEFNSGVGSSGTLNTGWGNSGSTNTGYFNAGHTNTGL 470 Query 438 GNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGF 497 NSG +TG+ N+GD NTG FN G NTG FN+G N GSFNGG N+G NSG NTG+ Sbjct 471 FNSGDTSTGLFNSGDTNTGLFNSGDTNTGFFNAGTANFGSFNGGSTNTGDWNSGSINTGY 530 Query 498 ANSGNINTGGFNAGNLNTGFGNTTDGLGENSG--------FGNAGSGNSGFNNSGRGNSG 549 ANSG NTG NAGNLNTG + D NSG FG G SG N G GNSG Sbjct 531 ANSGGTNTGILNAGNLNTGAFSPFDQPVVNSGFSNDFDGPFGKGGVNQSGAFNQGVGNSG 590 Query 550 AQNVGNLQ-----ISGFANSGQSVTGYNNSVSVTSGFGNKG-TGLFSGFMSGFGN-TGFL 602 + N++ SGF N G +G+ N+ S +SGF N G G+ GFMSGF N +G Sbjct 591 FDSGDNIKGGTVSSSGFENHGNFGSGFLNAGSFSSGFRNTGPEGINPGFMSGFVNSSGTF 650 Query 603 QSGFGNLEANPDNNSAT--SGFGNSGKQDSGGFNSIDFVSGFFH 644 SGF N T SGFGN G Q SG FN+ + SG H Sbjct 651 ISGFFNAGTFTPGLLETFNSGFGNLGNQVSGLFNAQNVKSGPIH 694 >gi|31792734|ref|NP_855227.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|31618324|emb|CAD96242.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=678 Score = 446 bits (1146), Expect = 7e-123, Method: Compositional matrix adjust. Identities = 356/715 (50%), Positives = 431/715 (61%), Gaps = 113/715 (15%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS M+ GAG P+LAAA AW GLA +L +AA+SF +VTS+LA G+WQGPAS Sbjct 3 FSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATGSWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM AA YA WLT A AQAE AA QA+AA AFE ALA VHP V ANR R L Sbjct 63 AAMTGAAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRLRSLVA 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA----------- 172 SN+ GQNAPAIAA+E+ YEQMWA DVA M GYH +SA A L + P+ Sbjct 123 SNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTPSPSAAATPGGAV 182 Query 173 -------------------LPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 L + NLG+GN+G+ N G+ NTG NLGN N+G+ N G GN Sbjct 183 IIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGNANIGDLNLGSGN- 241 Query 214 SAFHGQISSFNVGSGNIGNFNLGSGN--------GNVGIGPSSFNVGSGNIGNANVGGGN 265 I S+N+G GN G+ N GSGN GN+G S+N+G GN+G+ N+G GN Sbjct 242 ------IGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIG----SYNLGGGNLGSYNLGSGN 291 Query 266 SGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 +GD NFG GN GN N+G GN GN N G GN GN NFG GNTG+ N G Sbjct 292 TGDTNFGGGNTGNLNVGGGNT------------GNSNFGFGNTGNVNFGNGNTGDTNFGS 339 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI 385 GN+G GN+GFGN GS+N GFGN+GNNNIG GLTG NQIGFG LNSGSGN+GFGNSG GNI Sbjct 340 GNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNI 399 Query 386 GFFNSGSGNFGVGNSG--------------VTNTGVANSGNINTGFGNSGFINTGFGNAL 431 GFFNSG+ N G+GNSG ++G NSG ++TG GNSG ++TG+ N+ Sbjct 400 GFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIGNSGQLSTGWFNSA 459 Query 432 SVNTGFGNSGQANTGIGNAGDFNTGNFN-GGIINTGS---FNSGAFNSGSFNGGDANSGF 487 + +TG+ NSG NTG N+G NTG N GG + TGS FNSG N+GSFN G N+G Sbjct 460 TTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGD 519 Query 488 LNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGE----------NSGFGNAGSGN 537 NSG NTG+ NSGNINTG FN+G+LNTG N+ + + NSG+ NAG+ N Sbjct 520 FNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFN 579 Query 538 SGFNNSGR--------GNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLF 589 SGF+N+ R GNSG NVGN +G N G ++G+ NSV +G N Sbjct 580 SGFDNNARDEHAEFVTGNSGLANVGNYN-AGIINVGDHLSGFRNSVPTITGTAN------ 632 Query 590 SGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +SGF N G SGF N S SGF N + SG N SG+ H Sbjct 633 ---ISGFVNAGTSISGFFNF------GSLMSGFANFDDEVSGYLNGDSRASGWIH 678 >gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacterium marinum M] gi|183178625|gb|ACC43735.1| PPE family protein [Mycobacterium marinum M] Length=729 Score = 434 bits (1116), Expect = 3e-119, Method: Compositional matrix adjust. Identities = 364/736 (50%), Positives = 425/736 (58%), Gaps = 104/736 (14%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F PPE S R+Y G GS + +AA AWDGLA EL AASSF SVT+ L GAWQG ++ Sbjct 3 FLVDPPELTSARIYSGPGSGQMFSAAEAWDGLAAELRLAASSFESVTANLVAGAWQGASA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AMA A P+ L QAE AA QAR A AFE A VHPA+V ANR + LA+ Sbjct 63 TAMAAVATPHVRLLQGLAGQAEQAAAQARVVASAFEAVRAATVHPALVAANRAQFVSLAL 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPN-------- 175 SN+FGQNAPAIAA+E+ YE+MWAQDV M GYH+ SSAAA QL + L Sbjct 123 SNIFGQNAPAIAAVETDYEEMWAQDVTAMVGYHSTSSAAAEQLTPFHRMLAGLSGRSVSS 182 Query 176 ----------------------INLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 +NLG+GN GNLN+G GN G+ NLG+GN G N G GN Sbjct 183 AVAGGRLGGFVIPGLSIGNRGLLNLGLGNTGNLNLGWGNAGNLNLGSGNTGGINLGSGNT 242 Query 214 SAFH---GQISSFNVGSGNIGNFNLGSGNG---NVGIG-PSSFNVGSGNIGNANVGGGNS 266 +F+ G N+GSGNIGN NLGSGN NVG G FN+GSGNIGN N+G GN Sbjct 243 GSFNPGWGNAGKLNLGSGNIGNMNLGSGNTGILNVGSGNIGDFNLGSGNIGNLNLGSGNI 302 Query 267 GDNNFGFGNFGNANIGIGNA-GPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 G NFG GN GN N+G GN G N S G N G GN GN N GGGN GN+N G Sbjct 303 GKGNFGIGNTGNFNLGGGNTGGHNFGS---GNTGGHNFGNGNSGNHNVGGGNYGNSNFGS 359 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI 385 GN+G GN GFGNSG+ N GFGN+GNNNIG GLTG QIG GGLNSGSGNIGFGNSG NI Sbjct 360 GNIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIGFGNSGNNNI 419 Query 386 GFFNSGSGNFGVGNSGVTNTGVANSG-------NINTGFGNSGFINTGF----GNALSVN 434 GFFNSG N G NSG N G NSG N++ G GNSG +NTG G++ + N Sbjct 420 GFFNSGDNNVGFLNSGSENKGFINSGLGTGRGPNLSAGIGNSGDLNTGLFNSGGSSATTN 479 Query 435 TGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSG---------------AF-----N 474 TG+ NSG NTGIGN+GD NTG FN G +NTG FNSG AF N Sbjct 480 TGWFNSGSHNTGIGNSGDTNTGFFNSGNLNTGLFNSGDVNTGLFNSGNNNFAAFNAGSTN 539 Query 475 SGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFN----------AGNLNTGFGNTTDGL 524 +GSFN G +N+ NSG +NTG+A SGN NTGGFN +G+LNTG G+ D Sbjct 540 TGSFNAGSSNTLAFNSGDSNTGYAGSGNYNTGGFNSGASNTGFFDSGDLNTGIGSPVDQN 599 Query 525 GENSGFGNAGSG----------NSGFNNSGRGNSGAQNVGN----LQISGFANSGQSVTG 570 NSGF N G+G NSGF N G NSGA + G+ SG N G + G Sbjct 600 VANSGFMNTGTGNSGIRGTGDYNSGFANRGTYNSGADSAGHEAGMTSNSGVLNIGSNNAG 659 Query 571 YNNSVSVTSGFGNK--GTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQ 628 + N + SGF N +G G SGF N G + SG + SGFG Sbjct 660 FLNYGNYNSGFRNTVYPSGTPVGNTSGFVNVGAVNSGL------FSTGTGDSGFGQLADY 713 Query 629 DSGGFNSIDFVSGFFH 644 SG N+ D++SG+FH Sbjct 714 SSGVLNAKDYISGYFH 729 >gi|240171042|ref|ZP_04749701.1| PPE family protein, PPE8 [Mycobacterium kansasii ATCC 12478] Length=609 Score = 426 bits (1095), Expect = 7e-117, Method: Compositional matrix adjust. Identities = 366/654 (56%), Positives = 423/654 (65%), Gaps = 60/654 (9%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS RM+ GAGS P L AA AW LA+EL AASSF S T+ LAG +W G A+ Sbjct 3 FSVLPPEVNSARMFAGAGSGPTLTAAAAWGRLADELATAASSFNSATATLAGQSWLGRAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AMA A PY SWLT A A A+ AA QAR A +E A A VHP +V NR + LA+ Sbjct 63 TAMAAGAAPYTSWLTLAAAHAQRAAEQAREAVAGYEAARAATVHPVLVATNRGQLVSLAL 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNI 183 SN+FGQN PAIAA E+ YEQMWAQDV M+GYHA SAAAAQLA ALP IN G+GN+ Sbjct 123 SNLFGQNTPAIAAAEANYEQMWAQDVTAMSGYHAQVSAAAAQLAH--QALPQINFGIGNL 180 Query 184 GNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVG 243 GNLN+GNGN G+ N G+GN GNAN G GN N+GSGN+GN NLGSGNG+V Sbjct 181 GNLNIGNGNIGNGNAGSGNTGNANGGSGN-------TGDGNLGSGNVGNTNLGSGNGSVL 233 Query 244 IG-PSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNG- 301 +G SSFNVG GN+G+ NVG GNAGP+ ++ Sbjct 234 LGIKSSFNVGGGNLGDFNVG--------------------FGNAGPSSTAGNGNVGNGNL 273 Query 302 ---NVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLT 358 N+G GN GN N G GN GNAN+G GN G+ N G GNSGS N GFGNTGN NIGIGLT Sbjct 274 GSHNLGSGNTGNDNVGSGNNGNANVGYGNTGEANWGLGNSGSNNVGFGNTGNGNIGIGLT 333 Query 359 GSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFG 418 GSNQIG GGLNSGSGNIGFGNSG+ N+GFFNSGSGNFG+GNSG T+TG+ANSG ++TG G Sbjct 334 GSNQIGIGGLNSGSGNIGFGNSGSNNVGFFNSGSGNFGIGNSGDTSTGLANSGLLDTGIG 393 Query 419 NSGFINTGFGNA-----LSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAF 473 NSGF NTG GN+ NTGFGN+G+ NTG NAGDFN G+FNGG +TGSFNSG Sbjct 394 NSGFRNTGIGNSGAGPLAGSNTGFGNTGEHNTGFANAGDFNAGSFNGGNHSTGSFNSGFL 453 Query 474 NSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNA 533 N+G F NSG NTG+AN+G NTG FN+G NTG G+T D NSGFGN+ Sbjct 454 NTGCF----------NSGNVNTGYANAGGQNTGLFNSGGYNTGVGSTVDQPVLNSGFGNS 503 Query 534 GSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFM 593 G GNSGF N+G +SG N +GF N G TG N SGFGN TGLF+ Sbjct 504 GIGNSGFFNTGADSSGIGNSPVTFNTGFFNWGDRNTGLWN-----SGFGN--TGLFNSGS 556 Query 594 SGFGNTGFLQSGFGNLEANPDNNSAT---SGFGNSGKQDSGGFNSIDFVSGFFH 644 +G N+G SG G + N+ A SG NSG SGGFNS SGFF Sbjct 557 AGV-NSGMFNSGSGGFNSGFFNSGAAGGNSGLNNSGGTSSGGFNSDPGTSGFFR 609 >gi|340628497|ref|YP_004746949.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340006687|emb|CCC45875.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=582 Score = 408 bits (1049), Expect = 1e-111, Method: Compositional matrix adjust. Identities = 345/640 (54%), Positives = 400/640 (63%), Gaps = 105/640 (16%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 +A LPPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS LA AWQGPA+ Sbjct 3 YAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSSLASQAWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA AA PYA WL+AA A+A AA QA+A A AFE A A VHP VV ANR L + Sbjct 63 AAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLVVAANRSAFAQLVM 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI-NLGVGN 182 SN FG NAP IAA+E YEQMWA DVA M GYH+ +SAAA QL +Q AL + NLG+GN Sbjct 123 SNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGN 182 Query 183 IGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGS----- 237 IGN N+G GNTGD N GNGN+GN N+GSGN G+ NLGS Sbjct 183 IGNANLGGGNTGDLNTGNGNIGNT-----------------NLGSGNRGDANLGSGNIGN 225 Query 238 ---------------GNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 GNG G+ P S NVG+GN+GN+N+G GN+G++N GFGN GN N+G Sbjct 226 SNVGGGNFGNGNFGSGNGRAGL-PGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVG 284 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GNAG +GN G GNTG++N G GN G GN+GFGN+G+ N Sbjct 285 TGNAG----------------------SGNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGN 322 Query 343 FGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 GF GLTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS Sbjct 323 IGF----------GLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSD 372 Query 403 TNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFN 454 N G+ NSG NTGFGNSG +NTG GNA VNTGFGN G N G GN+G N Sbjct 373 ANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLN 432 Query 455 TGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLN 514 G+FN G INTG+FNSG N+G FN G N+G+ NSGLT NTG FNAG+LN Sbjct 433 AGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT----------NTGAFNAGSLN 482 Query 515 TGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQN-----------VGNLQISGFAN 563 TGFG G G NSGFGNAG+ NSGF N+G G+SG QN VG + +GF N Sbjct 483 TGFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGN 542 Query 564 SGQSVTGYNNSVSVTSGFGNKGTGLFSGF-----MSGFGN 598 +G G NS + SGF N G GF SGFGN Sbjct 543 TGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 220/446 (50%), Positives = 253/446 (57%), Gaps = 95/446 (21%) Query 250 NVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGP-NMSS---------------- 292 N+G GNIGNAN+GGGN+GD N G GN GN N+G GN G N+ S Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFGNG 236 Query 293 --------PAVPT------------------PGNGNVGIGNGGNGNFGGGNTGNANIGLG 326 +P GN NVG GN GN N G GN G+ NIG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 327 NVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIG 386 N G N GFGN+G N GFGNTGN NIG GLTG+NQ+G GGLNSGSGNIG NSGT N+G Sbjct 297 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVG 356 Query 387 FFNSGSGNFGVGNSGVTNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFG 438 FFNSG+GN G+GNS N G+ NSG NTGFGNSG +NTG GNA VNTGFG Sbjct 357 FFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFG 416 Query 439 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA 498 N G N G GN+G N G+FN G INTG+FNSG N+G FN G N+G+ NSGLTNTG Sbjct 417 NGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTG-- 474 Query 499 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQI 558 FNAG+LNTGFG G G NSGFGNAG+ NSGF N+G G+SG Sbjct 475 --------AFNAGSLNTGFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGSSG--------- 517 Query 559 SGFANSGQSVTGYNNSV--SVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNN 616 F N G + +G N+V + +GFGN G G N+G L SGF N Sbjct 518 --FQNGGSNNSGLQNAVGTVIAAGFGNTGAQTV-----GIANSGVLNSGFFN-------- 562 Query 617 SATSGFGNSGKQDSGGFNSIDFVSGF 642 SG +SGGFNS + SGF Sbjct 563 --------SGVHNSGGFNSENQRSGF 580 Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust. Identities = 173/404 (43%), Positives = 213/404 (53%), Gaps = 77/404 (19%) Query 302 NVGIGNGGNGNFGGGNTG----------NANIGLGNVGDGNVG----------------- 334 N+GIGN GN N GGGNTG N N+G GN GD N+G Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFGNG 236 Query 335 ----------------------------FGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFG 366 GN+G+ N GFGNTGNNN+G G GS IG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 367 GLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGV--ANSGNINTGFGNSGFIN 424 N+GS N GFGN+G GNIGF N+G+GN G G +G G+ NSG+ N G NSG N Sbjct 297 --NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNN 354 Query 425 TGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDAN 484 GF N+ + N G GNS AN GIGN+G G F G NTG NSG+ N+G N G N Sbjct 355 VGFFNSGNGNLGIGNSSDANVGIGNSGA-TVGPFVAGH-NTGFGNSGSLNTGMGNAGGVN 412 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSG 544 +GF N G N GF NSG +N G FNAG++NTG N+ G N+G NAG N+G++NSG Sbjct 413 TGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQG---NTGDFNAGVRNTGWSNSG 469 Query 545 RGNSGAQNVGNLQISGFANSGQSV---TGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGF 601 N+GA N G+L +GF G +G+ N+ + SGF N G G SGF +G N Sbjct 470 LTNTGAFNAGSLN-TGFGAVGTGPGPNSGFGNAGTNNSGFFNTGVGS-SGFQNGGSNNSG 527 Query 602 LQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 LQ+ G + A +GFGN+G Q G NS SGFF+ Sbjct 528 LQNAVGTVIA--------AGFGNTGAQTVGIANSGVLNSGFFNS 563 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 104/294 (36%), Positives = 131/294 (45%), Gaps = 70/294 (23%) Query 402 VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN----------------- 444 + N G+ N GN N G GN+G +NTG GN + N G GN G AN Sbjct 175 LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNFG 234 Query 445 ---------------------------------TGIGNAGDFNTGNFNGGIINTGSFNSG 471 TG N G NTGN N G N GS N G Sbjct 235 NGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIG 294 Query 472 AFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFG 531 A N+GS +N GF N+G+ N GF N+GN N G GN G G G G N G Sbjct 295 AGNTGS-----SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSG-NIGLF 348 Query 532 NAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSG 591 N+G+ N GF NSG GN G N + + G NSG +V + +GFGN G+ Sbjct 349 NSGTNNVGFFNSGNGNLGIGNSSDANV-GIGNSGATVGPF--VAGHNTGFGNSGS----- 400 Query 592 FMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 +G GN G + +GFGN A GFGNSG+ ++G FN+ +G F+ Sbjct 401 LNTGMGNAGGVNTGFGNGGA------INLGFGNSGQLNAGSFNAGSINTGNFNS 448 >gi|15843145|ref|NP_338182.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31794709|ref|NP_857202.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57117121|ref|YP_177985.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 41 more sequence titles Length=582 Score = 407 bits (1047), Expect = 2e-111, Method: Compositional matrix adjust. Identities = 344/640 (54%), Positives = 400/640 (63%), Gaps = 105/640 (16%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 +A LPPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS+LA AWQGPA+ Sbjct 3 YAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA AA PYA WL+AA A+A AA QA+A A AFE A A VHP +V ANR L + Sbjct 63 AAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVM 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI-NLGVGN 182 SN FG NAP IAA+E YEQMWA DVA M GYH+ +SAAA QL +Q AL + NLG+GN Sbjct 123 SNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGN 182 Query 183 IGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGS----- 237 IGN N+G GNTGD N GNGN+GN N+GSGN G+ NLGS Sbjct 183 IGNANLGGGNTGDLNTGNGNIGNT-----------------NLGSGNRGDANLGSGNIGN 225 Query 238 ---------------GNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 GNG G+ P S NVG+GN+GN+N+G GN+G++N GFGN GN N+G Sbjct 226 SNVGGGNVGNGNFGSGNGRAGL-PGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVG 284 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GNAG GN G GNTG++N G GN G GN+GFGN+G+ N Sbjct 285 TGNAGS----------------------GNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGN 322 Query 343 FGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 GF GLTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS Sbjct 323 IGF----------GLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSD 372 Query 403 TNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFN 454 N G+ NSG NTGFGNSG +NTG GNA VNTGFGN G N G GN+G N Sbjct 373 ANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLN 432 Query 455 TGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLN 514 G+FN G INTG+FNSG N+G FN G N+G+ NSGLT NTG FNAG+LN Sbjct 433 AGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT----------NTGAFNAGSLN 482 Query 515 TGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQN-----------VGNLQISGFAN 563 TGFG G G NSGFGNAG+ NSGF N+G G+SG QN VG + +GF N Sbjct 483 TGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGN 542 Query 564 SGQSVTGYNNSVSVTSGFGNKGTGLFSGF-----MSGFGN 598 +G G NS + SGF N G GF SGFGN Sbjct 543 TGAQTVGIANSGVLNSGFFNSGVHNSGGFNSENQRSGFGN 582 Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 220/446 (50%), Positives = 253/446 (57%), Gaps = 95/446 (21%) Query 250 NVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGP-NMSS---------------- 292 N+G GNIGNAN+GGGN+GD N G GN GN N+G GN G N+ S Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 Query 293 --------PAVPT------------------PGNGNVGIGNGGNGNFGGGNTGNANIGLG 326 +P GN NVG GN GN N G GN G+ NIG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 327 NVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIG 386 N G N GFGN+G N GFGNTGN NIG GLTG+NQ+G GGLNSGSGNIG NSGT N+G Sbjct 297 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVG 356 Query 387 FFNSGSGNFGVGNSGVTNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFG 438 FFNSG+GN G+GNS N G+ NSG NTGFGNSG +NTG GNA VNTGFG Sbjct 357 FFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFG 416 Query 439 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA 498 N G N G GN+G N G+FN G INTG+FNSG N+G FN G N+G+ NSGLTNTG Sbjct 417 NGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTG-- 474 Query 499 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQI 558 FNAG+LNTGFG G G NSGFGNAG+ NSGF N+G G+SG Sbjct 475 --------AFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSG--------- 517 Query 559 SGFANSGQSVTGYNNSV--SVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNN 616 F N G + +G N+V + +GFGN G G N+G L SGF N Sbjct 518 --FQNGGSNNSGLQNAVGTVIAAGFGNTGAQTV-----GIANSGVLNSGFFN-------- 562 Query 617 SATSGFGNSGKQDSGGFNSIDFVSGF 642 SG +SGGFNS + SGF Sbjct 563 --------SGVHNSGGFNSENQRSGF 580 Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 173/404 (43%), Positives = 213/404 (53%), Gaps = 77/404 (19%) Query 302 NVGIGNGGNGNFGGGNTG----------NANIGLGNVGDGNVG----------------- 334 N+GIGN GN N GGGNTG N N+G GN GD N+G Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 Query 335 ----------------------------FGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFG 366 GN+G+ N GFGNTGNNN+G G GS IG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 367 GLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGV--ANSGNINTGFGNSGFIN 424 N+GS N GFGN+G GNIGF N+G+GN G G +G G+ NSG+ N G NSG N Sbjct 297 --NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNN 354 Query 425 TGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDAN 484 GF N+ + N G GNS AN GIGN+G G F G NTG NSG+ N+G N G N Sbjct 355 VGFFNSGNGNLGIGNSSDANVGIGNSGA-TVGPFVAGH-NTGFGNSGSLNTGMGNAGGVN 412 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSG 544 +GF N G N GF NSG +N G FNAG++NTG N+ G N+G NAG N+G++NSG Sbjct 413 TGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQG---NTGDFNAGVRNTGWSNSG 469 Query 545 RGNSGAQNVGNLQISGFANSGQSV---TGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGF 601 N+GA N G+L +GF G +G+ N+ + SGF N G G SGF +G N Sbjct 470 LTNTGAFNAGSLN-TGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGS-SGFQNGGSNNSG 527 Query 602 LQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 LQ+ G + A +GFGN+G Q G NS SGFF+ Sbjct 528 LQNAVGTVIA--------AGFGNTGAQTVGIANSGVLNSGFFNS 563 Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 104/294 (36%), Positives = 131/294 (45%), Gaps = 70/294 (23%) Query 402 VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN----------------- 444 + N G+ N GN N G GN+G +NTG GN + N G GN G AN Sbjct 175 LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVG 234 Query 445 ---------------------------------TGIGNAGDFNTGNFNGGIINTGSFNSG 471 TG N G NTGN N G N GS N G Sbjct 235 NGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIG 294 Query 472 AFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFG 531 A N+GS +N GF N+G+ N GF N+GN N G GN G G G G N G Sbjct 295 AGNTGS-----SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSG-NIGLF 348 Query 532 NAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSG 591 N+G+ N GF NSG GN G N + + G NSG +V + +GFGN G+ Sbjct 349 NSGTNNVGFFNSGNGNLGIGNSSDANV-GIGNSGATVGPF--VAGHNTGFGNSGS----- 400 Query 592 FMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 +G GN G + +GFGN A GFGNSG+ ++G FN+ +G F+ Sbjct 401 LNTGMGNAGGVNTGFGNGGA------INLGFGNSGQLNAGSFNAGSINTGNFNS 448 >gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacterium marinum M] gi|183174892|gb|ACC40002.1| PPE family protein [Mycobacterium marinum M] Length=679 Score = 406 bits (1043), Expect = 7e-111, Method: Compositional matrix adjust. Identities = 325/594 (55%), Positives = 377/594 (64%), Gaps = 73/594 (12%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NSLR++ G GS P+LAAA AWDGLA+EL AA++F SVTS L GG+WQGPA+ Sbjct 3 FSVLPPEINSLRIFAGTGSGPMLAAAAAWDGLADELSTAAAAFSSVTSGLTGGSWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA AA PYA WL A A+A + QA+ A AFE A VHP +V ANR + L Sbjct 63 AAMAAAAAPYAGWLGLAAARAGDVSAQAKVVAAAFEAVRAATVHPMLVAANRAQLVSLVR 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQ------PALPNI- 176 SN+ G NAPAIA E+ YE MWA DVA M GYH +SAAAAQLA WQ P LP Sbjct 123 SNLLGLNAPAIATTEAEYEAMWAADVAAMVGYHGGASAAAAQLAPWQQWLQSLPGLPGQL 182 Query 177 --------------NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISS 222 NLG+GN + NVG+G+ G NLG+GN GN N Sbjct 183 AGSATAAAAANGWPNLGIGNT-DSNVGSGDVGTQNLGSGNTGNTN--------------- 226 Query 223 FNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 +GSGN GN NLGSGN NVGSGN+GN+N G GN+G+ N G GN G+ N+G Sbjct 227 --LGSGNTGNGNLGSGN------RGDSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVG 278 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GNAG T GN N G GN G+GN G GN GN N G GN GD NVG N GS N Sbjct 279 FGNAGLG------GTAGNDNFGNGNLGSGNTGSGNIGNQNQGWGNQGDNNVGLANRGSDN 332 Query 343 FGFGNTGNN----------NIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGS 392 GFGNTGNN NIGIGLTG+NQ+GFGGLNSGSGN+GFGNSGTGN+GFFNSG Sbjct 333 MGFGNTGNNNVGFGNTGSGNIGIGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNSGV 392 Query 393 GNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNA-----LSVNTGFGNSGQANTGI 447 GN+G+GNSG +TG NSG I+TG GNSG +NTG GN+ N GFGNSG N G+ Sbjct 393 GNWGIGNSGAIDTGFGNSGFIDTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNFGV 452 Query 448 GNAGDFNTGNFNGGIINTGSFNS-----GAFNSGSFNGGDANSGFLNSGLTNTGFANSGN 502 GN+G FN G+FN N GSFNS G FN GSFN G N+G N+G NTGF N+G+ Sbjct 453 GNSGSFNAGSFNSSTSNLGSFNSGNFVLGGFNVGSFNSGAHNTGAFNAGGYNTGFWNAGD 512 Query 503 INTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRG--NSGAQNVG 554 INTG +N+G+LNTG G+ NSGF NAGS +SG N G G NSG NVG Sbjct 513 INTGMWNSGDLNTGLGSAITQTVANSGFFNAGSTSSGLFNVGSGGHNSGFVNVG 566 Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 142/329 (44%), Positives = 173/329 (53%), Gaps = 47/329 (14%) Query 322 NIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSG 381 N+G+GN D NVG G+ G+ N G GNTGN N+G G N+G+GN+G GN G Sbjct 197 NLGIGNT-DSNVGSGDVGTQNLGSGNTGNTNLGSG------------NTGNGNLGSGNRG 243 Query 382 TGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGF------INTGFGNALSVNT 435 N+G N G+ N+G GN+G N G N G+ N GFGN+G N G GN S NT Sbjct 244 DSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAGLGGTAGNDNFGNGNLGSGNT 303 Query 436 GFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNT 495 G GN G N G GN GD N G + N GS N GF N+G N Sbjct 304 GSGNIGNQNQGWGNQGDNNVG-----LANRGS---------------DNMGFGNTGNNNV 343 Query 496 GFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN 555 GF N+G+ N G GN GFG G G N GFGN+G+GN GF NSG GN G N G Sbjct 344 GFGNTGSGNIGIGLTGNNQMGFGGLNSGSG-NLGFGNSGTGNVGFFNSGVGNWGIGNSGA 402 Query 556 LQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDN 615 + +GF NSG TG NS ++ +G GN G SGF GFGN+G G GN + Sbjct 403 ID-TGFGNSGFIDTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNFGVGN------S 455 Query 616 NSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 S +G NS + G FNS +FV G F+ Sbjct 456 GSFNAGSFNSSTSNLGSFNSGNFVLGGFN 484 Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 133/297 (45%), Positives = 161/297 (55%), Gaps = 31/297 (10%) Query 352 NIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSG 411 N+GIG T SN +G G + G+ N+G GN+G N+G N+G+GN G GN G +N G N G Sbjct 197 NLGIGNTDSN-VGSGDV--GTQNLGSGNTGNTNLGSGNTGNGNLGSGNRGDSNVGSGNLG 253 Query 412 NINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSG 471 N N G GN+G N G GN N GFGN+G G AG+ N GN N G NTGS N G Sbjct 254 NSNWGSGNTGNYNQGSGNHGDNNVGFGNAGLG----GTAGNDNFGNGNLGSGNTGSGNIG 309 Query 472 AFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFG 531 N G N GD N G N G N GF N+GN N G N G+ N G G T + GFG Sbjct 310 NQNQGWGNQGDNNVGLANRGSDNMGFGNTGNNNVGFGNTGSGNIGIGLTGN---NQMGFG 366 Query 532 --NAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLF 589 N+GSGN GF NSG GN G F NSG G NS ++ +GFGN Sbjct 367 GLNSGSGNLGFGNSGTGNVG-----------FFNSGVGNWGIGNSGAIDTGFGN------ 409 Query 590 SGFM-SGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 SGF+ +G GN+G L +G GN N + GFGNSG + G NS F +G F+ Sbjct 410 SGFIDTGIGNSGALNTGIGNSGLNAGS-GFNVGFGNSGINNFGVGNSGSFNAGSFNS 465 Score = 37.7 bits (86), Expect = 6.2, Method: Compositional matrix adjust. Identities = 102/271 (38%), Positives = 128/271 (48%), Gaps = 60/271 (22%) Query 176 INLGVGNIGNLNVGNGNTG-----DYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNI 230 I+ G+GN G LN G GN+G +N+G GN G NFG GN +F+ SFN + N+ Sbjct 413 IDTGIGNSGALNTGIGNSGLNAGSGFNVGFGNSGINNFGVGNSGSFN--AGSFNSSTSNL 470 Query 231 GNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGP-- 288 G+FN +GN +G FNVGS N G N G N+G N GF N G+ N G+ N+G Sbjct 471 GSFN----SGNFVLG--GFNVGSFNSGAHNTGAFNAGGYNTGFWNAGDINTGMWNSGDLN 524 Query 289 -NMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDG--NVGFGNSGS--YNF 343 + S T N +G F N G+ + GL NVG G N GF N GS YN Sbjct 525 TGLGSAITQTVAN---------SGFF---NAGSTSSGLFNVGSGGHNSGFVNVGSGGYNS 572 Query 344 GFGN--TGNNNIGIGLTGSNQ-------------------IGFGGLNSG-------SGNI 375 GF N G +N G +G+ +G GG N+G N Sbjct 573 GFFNLGAGGSNAGFFNSGAGGGNTGLLNLGNGGNNTGFFNVGNGGYNTGFVNAGSDGSNA 632 Query 376 GFGNSGTGNIGFFNSGSGNFGVGNSGVTNTG 406 GF G N G N GS N GV NSG N+G Sbjct 633 GFFTLGGYNSGVLNIGSLNSGVLNSGTANSG 663 >gi|240170430|ref|ZP_04749089.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=652 Score = 405 bits (1042), Expect = 8e-111, Method: Compositional matrix adjust. Identities = 353/685 (52%), Positives = 410/685 (60%), Gaps = 80/685 (11%) Query 7 LPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPASAAM 66 +PPE NSLR++ GAGS P+L AA AWD LA EL +AA SFGSVT+ LAG AWQG AS AM Sbjct 1 MPPEINSLRIFAGAGSAPMLEAAVAWDSLAAELGSAAESFGSVTAGLAGQAWQGAASRAM 60 Query 67 ANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAVSNV 126 AA PY+ WL+ A A+A A+ QA+A A AFE A +VHP V ANR L +SNV Sbjct 61 VAAAAPYSGWLSTAAARAAAASAQAKAVASAFETARVAMVHPLAVAANRNAFVRLVLSNV 120 Query 127 FGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGV------ 180 FGQNAPAIA E+ YEQMWA DVA M GYH +SAAAA L SWQ L GV Sbjct 121 FGQNAPAIALAEAQYEQMWAADVAAMVGYHGGASAAAAHLQSWQRGLQQALSGVLGLPAS 180 Query 181 ----------------------------GNIGNLNVGNGNTGDYNLGNGNLGNANFGGGN 212 GN GNL +G GNTGD NLG+GN+GNAN G GN Sbjct 181 AAAAAAQNPAAGSAAAGAAAGAAAATPVGNNGNLQLGGGNTGDSNLGSGNIGNANLGSGN 240 Query 213 GSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFG 272 + N+G GNIGN NLGSGN + NVG+GN G+AN G GN G N G Sbjct 241 -------TGNANLGGGNIGNANLGSGN------KGNINVGNGNFGSANFGDGNIGIRNAG 287 Query 273 FGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGN 332 GN G AN+G GN G GN G GN G GN G+ N+G GN+G+ N Sbjct 288 AGNNGTANMGAGNFGTGNFGFGNIGNGNFGGGNIGPGNV--GDGNNGSTNLGSGNLGNFN 345 Query 333 VGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNI------- 385 +G GN GS N GFGN GNNN+G GLTG+NQ+G GGLNSG+ NIGFGNSG NI Sbjct 346 LGSGNLGSNNVGFGNHGNNNVGFGLTGNNQVGIGGLNSGNNNIGFGNSGDNNIGFFNSGN 405 Query 386 ---GFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQ 442 GFFNSG+GN G GNSG TN G N+G NTGFGN+GF NTGFGNA NTGFGN+G+ Sbjct 406 NNVGFFNSGNGNVGFGNSGATNGGFWNAGGGNTGFGNAGFTNTGFGNAGDTNTGFGNAGR 465 Query 443 ANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGN 502 N G GNAG N G N G +N G N+G N+G N G N+GF N+G+TNTG+ NSGN Sbjct 466 LNAGYGNAGILNAGYGNAGNVNAGFGNAGIQNTGWENSGTVNTGFGNAGMTNTGWGNSGN 525 Query 503 INTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRG--NSGAQNVGNLQI-S 559 INTG N+ NL+TG GN +G NSGFG+ G+ NSGF N+ G NSG N G + S Sbjct 526 INTGFLNSTNLSTGVGNLGS-VGPNSGFGHTGANNSGFFNTSTGGFNSGFFNAGVGGVNS 584 Query 560 GFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSAT 619 G NSG S G NN SGF N G GNTG +G N + P+ T Sbjct 585 GINNSGASNVGINN-----SGFANV----------GIGNTGARNAGIAN--SAPNIVIGT 627 Query 620 SGFGNSGKQDSGGFNSIDFVSGFFH 644 SG NS SGGFN+ +SGFFH Sbjct 628 SGVANSATLSSGGFNTGTSLSGFFH 652 >gi|289440962|ref|ZP_06430706.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289571774|ref|ZP_06452001.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289413881|gb|EFD11121.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289545528|gb|EFD49176.1| PPE family protein [Mycobacterium tuberculosis T17] Length=582 Score = 405 bits (1041), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 343/640 (54%), Positives = 399/640 (63%), Gaps = 105/640 (16%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 +A LPPE NSLRM+ GAGS P+LAAA AWDGLA EL +AASSFGSVTS+LA AWQGPA+ Sbjct 3 YAVLPPELNSLRMFTGAGSAPMLAAAVAWDGLAAELGSAASSFGSVTSDLASQAWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA AA PYA WL+AA A+A AA QA+A A AFE A A VHP +V ANR L + Sbjct 63 AAMAAAAAPYAGWLSAAAARAAGAAAQAKAVASAFEAARAATVHPLLVAANRNAFAQLVM 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI-NLGVGN 182 SN FG NAP IAA+E YEQMWA DVA M GYH+ +SAAA QL +Q AL + NLG+GN Sbjct 123 SNWFGLNAPLIAAVEGAYEQMWAADVAAMVGYHSGASAAAEQLVPFQQALQQLPNLGIGN 182 Query 183 IGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGS----- 237 IGN N+G GNTGD N GNGN+GN N+GSGN G+ NLGS Sbjct 183 IGNANLGGGNTGDLNTGNGNIGNT-----------------NLGSGNRGDANLGSGNIGN 225 Query 238 ---------------GNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 GNG G+ P S NVG+GN+GN+N+G GN+G++N GFGN GN N+G Sbjct 226 SNVGGGNVGNGNFGSGNGRAGL-PGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVG 284 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GNAG GN G GNTG++N G GN G GN+GFGN+G+ N Sbjct 285 TGNAGS----------------------GNIGAGNTGSSNWGFGNNGIGNIGFGNTGNGN 322 Query 343 FGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 GF GLTG+NQ+G GGLNSGSGNIG NSGT N+GFFNSG+GN G+GNS Sbjct 323 IGF----------GLTGNNQVGIGGLNSGSGNIGLFNSGTNNVGFFNSGNGNLGIGNSSD 372 Query 403 TNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFN 454 N G+ NSG NTGFGNSG +NTG GNA VNTGFGN G N G GN+G N Sbjct 373 ANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFGNGGAINLGFGNSGQLN 432 Query 455 TGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLN 514 G+FN G INTG+FNSG N+G FN G N+G+ NSGLT NTG FNAG+LN Sbjct 433 AGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLT----------NTGAFNAGSLN 482 Query 515 TGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQN-----------VGNLQISGFAN 563 TGFG G G NSGFGNAG+ NSGF N+G G+SG QN VG + +GF N Sbjct 483 TGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSGFQNGGSNNSGLQNAVGTVIAAGFGN 542 Query 564 SGQSVTGYNNSVSVTSGFGNKGTGLFSGF-----MSGFGN 598 +G G NS + SGF N GF SGFGN Sbjct 543 TGAQTVGIANSGVLNSGFFNSSVHNSGGFNSENQRSGFGN 582 Score = 244 bits (622), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 219/446 (50%), Positives = 252/446 (57%), Gaps = 95/446 (21%) Query 250 NVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGP-NMSS---------------- 292 N+G GNIGNAN+GGGN+GD N G GN GN N+G GN G N+ S Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 Query 293 --------PAVPT------------------PGNGNVGIGNGGNGNFGGGNTGNANIGLG 326 +P GN NVG GN GN N G GN G+ NIG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 327 NVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIG 386 N G N GFGN+G N GFGNTGN NIG GLTG+NQ+G GGLNSGSGNIG NSGT N+G Sbjct 297 NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNNVG 356 Query 387 FFNSGSGNFGVGNSGVTNTGVANSGNI--------NTGFGNSGFINTGFGNALSVNTGFG 438 FFNSG+GN G+GNS N G+ NSG NTGFGNSG +NTG GNA VNTGFG Sbjct 357 FFNSGNGNLGIGNSSDANVGIGNSGATVGPFVAGHNTGFGNSGSLNTGMGNAGGVNTGFG 416 Query 439 NSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFA 498 N G N G GN+G N G+FN G INTG+FNSG N+G FN G N+G+ NSGLTNTG Sbjct 417 NGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQGNTGDFNAGVRNTGWSNSGLTNTG-- 474 Query 499 NSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQI 558 FNAG+LNTGFG G G NSGFGNAG+ NSGF N+G G+SG Sbjct 475 --------AFNAGSLNTGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGSSG--------- 517 Query 559 SGFANSGQSVTGYNNSV--SVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNN 616 F N G + +G N+V + +GFGN G G N+G L SGF N Sbjct 518 --FQNGGSNNSGLQNAVGTVIAAGFGNTGAQTV-----GIANSGVLNSGFFN-------- 562 Query 617 SATSGFGNSGKQDSGGFNSIDFVSGF 642 S +SGGFNS + SGF Sbjct 563 --------SSVHNSGGFNSENQRSGF 580 Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 173/404 (43%), Positives = 213/404 (53%), Gaps = 77/404 (19%) Query 302 NVGIGNGGNGNFGGGNTG----------NANIGLGNVGDGNVG----------------- 334 N+GIGN GN N GGGNTG N N+G GN GD N+G Sbjct 177 NLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVGNG 236 Query 335 ----------------------------FGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFG 366 GN+G+ N GFGNTGNNN+G G GS IG G Sbjct 237 NFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIGAG 296 Query 367 GLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGV--ANSGNINTGFGNSGFIN 424 N+GS N GFGN+G GNIGF N+G+GN G G +G G+ NSG+ N G NSG N Sbjct 297 --NTGSSNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSGNIGLFNSGTNN 354 Query 425 TGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDAN 484 GF N+ + N G GNS AN GIGN+G G F G NTG NSG+ N+G N G N Sbjct 355 VGFFNSGNGNLGIGNSSDANVGIGNSGA-TVGPFVAGH-NTGFGNSGSLNTGMGNAGGVN 412 Query 485 SGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSG 544 +GF N G N GF NSG +N G FNAG++NTG N+ G N+G NAG N+G++NSG Sbjct 413 TGFGNGGAINLGFGNSGQLNAGSFNAGSINTGNFNSGQG---NTGDFNAGVRNTGWSNSG 469 Query 545 RGNSGAQNVGNLQISGFANSGQSV---TGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGF 601 N+GA N G+L +GF G +G+ N+ + SGF N G G SGF +G N Sbjct 470 LTNTGAFNAGSLN-TGFGAVGTGSGPNSGFGNAGTNNSGFFNTGVGS-SGFQNGGSNNSG 527 Query 602 LQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 LQ+ G + A +GFGN+G Q G NS SGFF+ Sbjct 528 LQNAVGTVIA--------AGFGNTGAQTVGIANSGVLNSGFFNS 563 Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 104/294 (36%), Positives = 131/294 (45%), Gaps = 70/294 (23%) Query 402 VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQAN----------------- 444 + N G+ N GN N G GN+G +NTG GN + N G GN G AN Sbjct 175 LPNLGIGNIGNANLGGGNTGDLNTGNGNIGNTNLGSGNRGDANLGSGNIGNSNVGGGNVG 234 Query 445 ---------------------------------TGIGNAGDFNTGNFNGGIINTGSFNSG 471 TG N G NTGN N G N GS N G Sbjct 235 NGNFGSGNGRAGLPGSGNVGNGNLGNSNLGSGNTGNSNVGFGNTGNNNVGTGNAGSGNIG 294 Query 472 AFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFG 531 A N+GS +N GF N+G+ N GF N+GN N G GN G G G G N G Sbjct 295 AGNTGS-----SNWGFGNNGIGNIGFGNTGNGNIGFGLTGNNQVGIGGLNSGSG-NIGLF 348 Query 532 NAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSG 591 N+G+ N GF NSG GN G N + + G NSG +V + +GFGN G+ Sbjct 349 NSGTNNVGFFNSGNGNLGIGNSSDANV-GIGNSGATVGPF--VAGHNTGFGNSGS----- 400 Query 592 FMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 +G GN G + +GFGN A GFGNSG+ ++G FN+ +G F+ Sbjct 401 LNTGMGNAGGVNTGFGNGGA------INLGFGNSGQLNAGSFNAGSINTGNFNS 448 >gi|183983645|ref|YP_001851936.1| PPE family protein [Mycobacterium marinum M] gi|183176971|gb|ACC42081.1| PPE family protein [Mycobacterium marinum M] Length=636 Score = 396 bits (1017), Expect = 7e-108, Method: Compositional matrix adjust. Identities = 347/693 (51%), Positives = 407/693 (59%), Gaps = 114/693 (16%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 FA LPPE NS+RM+ GAGS P+LAAA AWDGL+ EL AA SF SVTS LAG + Sbjct 3 FAVLPPEINSVRMFSGAGSEPMLAAAAAWDGLSAELGEAAESFASVTSGLAGAGQAWQGA 62 Query 64 AAMANAA--GPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 AA A A GPYASWL AA A+A A+ A+ A AFE A A +VHP V ANR L Sbjct 63 AASAMVAAAGPYASWLGAAAARAAGASASAKVVASAFEAARAAMVHPLAVAANRNGFVQL 122 Query 122 AVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQ----------- 170 +SN+FGQNAPAIAA E YEQMWA DVA MAGYH +SAAAAQL+SWQ Sbjct 123 VMSNLFGQNAPAIAAAEGVYEQMWAADVAAMAGYHGGASAAAAQLSSWQGMVSGVLSGVP 182 Query 171 -----------------------------------PA-LPNINLGVGNIGNLNVGNGNTG 194 PA L INLG GNIG+LN+G+GN G Sbjct 183 GVSGLVGGAAPAAAAVTTPLAGAAQAVASQAASVVPAPLQGINLGFGNIGSLNLGSGNIG 242 Query 195 DYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSG 254 D NLG+GN+GN NFG SGNIG NLG GN FN+GSG Sbjct 243 DGNLGSGNIGNINFG-----------------SGNIGGTNLGGGN------QGDFNLGSG 279 Query 255 NIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFG 314 NIGN N+G GN G N G GN G+ N G+GN G N N+G GN G+ NFG Sbjct 280 NIGNLNLGSGNFGSQNLGSGNIGSINFGVGNIG------------NTNIGSGNIGDTNFG 327 Query 315 GGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGN 374 GN G+ N G GN G N+GFGN GS NFGFGNTGNNNIG GLTG Q G GGLNSGSGN Sbjct 328 SGNIGSLNFGSGNSGSNNIGFGNFGSSNFGFGNTGNNNIGFGLTGDGQFGIGGLNSGSGN 387 Query 375 IGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVN 434 IG NSG NIGFFNSGSGN G GN+G N NTGFGN+G +NTGF N S+N Sbjct 388 IGLFNSGDNNIGFFNSGSGNLGFGNAG----------NSNTGFGNAGDVNTGFWNGGSIN 437 Query 435 TGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTN 494 TG G++G N G ++G++N G+FN G NT NSG N+G N G+ NSGF N+G N Sbjct 438 TGVGHAGATNFGFFDSGNYNAGSFNAGNSNTSFGNSGDVNTGFLNAGNINSGFGNAGNVN 497 Query 495 TGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGF---NNSGRGNSGAQ 551 TG+AN+G+INTGGFN G LNTGF + T G NSG+ N G+GNSGF + SG GNSG Q Sbjct 498 TGWANAGDINTGGFNGGVLNTGFFSATTHAGPNSGYFNVGTGNSGFGHNDPSGSGNSGLQ 557 Query 552 NVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEA 611 N G SG+ N+ + T NS ++ +G+GN G + + N GF+ +G Sbjct 558 NSG-FGNSGYVNTSTTSTFGGNSGALDTGYGNAGF-----YNAAVQNAGFVIAGV----- 606 Query 612 NPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 TSG +SG SG D +SGFF Sbjct 607 ------NTSGILSSGTGSSGLLVFGDGLSGFFK 633 >gi|240173028|ref|ZP_04751686.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=591 Score = 395 bits (1016), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 338/651 (52%), Positives = 392/651 (61%), Gaps = 75/651 (11%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F LPPE NS R+YLGAGS P+LAAA AWDGLA EL +AA SFGSVTS L G WQGPA+ Sbjct 6 FVILPPEINSARVYLGAGSGPMLAAAAAWDGLAGELGSAAGSFGSVTSGLTGAVWQGPAA 65 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AM AA PY WL+AA A A+ AA QAR A AFE A+A VHP V ANR + L V Sbjct 66 TAMVEAAAPYVGWLSAAAAHAQGAAGQARTAVSAFEAAVAATVHPVAVAANRNQLVSLVV 125 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQ-------PALPNI 176 SN+FGQNAPAIAA E+ YEQMWAQDVA M GYH ++A AQLA Q LP + Sbjct 126 SNLFGQNAPAIAAAETAYEQMWAQDVAAMVGYHGEAAAVVAQLAPMQSGLQQALQTLPGM 185 Query 177 --NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFN 234 NLGVGN G+ N+G GN GD NLG+GN G S NVGSGN GN N Sbjct 186 LANLGVGNAGSGNLGGGNHGDNNLGSGNNG-----------------SHNVGSGNAGNTN 228 Query 235 LGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPA 294 LG+GN GN+NVG GN GD NFG GN G N G GN G Sbjct 229 LGNGNS----------------GNSNVGNGNRGDQNFGSGNSGGTNTGNGNIGTGNVGSG 272 Query 295 VPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIG 354 GN G N GN G+ N+G GN G N+G N+G+++FGFGNTGNN+IG Sbjct 273 NLGNGNLGNGNLGNSNVG--SGNRGDNNMGFGNRGSSNIGVSNTGNHDFGFGNTGNNDIG 330 Query 355 IGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNIN 414 GLTG NQ+GFG LNSGSGNIGFGNSG+GN+GFFNSG+GN G+ NSG + G NSG+ N Sbjct 331 FGLTGDNQVGFGALNSGSGNIGFGNSGSGNVGFFNSGTGNVGLFNSGGHSFGAENSGSFN 390 Query 415 TGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFN 474 TG NSG NTGF VN GF + G AN G N G FN G+ N G N+G N+G++N Sbjct 391 TGLTNSGQGNTGF-----VNAGFNSLGLANAGANNMGVFNGGSQNFGFGNSGFQNTGSWN 445 Query 475 SGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLG-ENSGFGNA 533 +GS N GD N+G NTG+ANSG NTGGF++G+LNTGFG+ +G +NSGFG Sbjct 446 AGSINTGD-----FNAGSINTGWANSGASNTGGFDSGSLNTGFGSMLTPVGAKNSGFGTT 500 Query 534 GSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFM 593 G +SGF NSG SG QN G SGF NSG N+ F+ Sbjct 501 GLDSSGFFNSGGDTSGFQNTGLAFESGFHNSGNGNNAGINNTGS--------------FL 546 Query 594 SGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +G GNTGF G N +N SG GNSG DSG FN D SGFF+ Sbjct 547 AGIGNTGFDNIGIAN------SNVFNSGIGNSGNDDSGFFNKTDAQSGFFN 591 >gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13880753|gb|AAK45425.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=636 Score = 394 bits (1011), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 352/669 (53%), Positives = 410/669 (62%), Gaps = 76/669 (11%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQG Sbjct 18 VMSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQG 77 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PA+ AMA AA PYASWL+ A +A A QA+AAA +E A A V P +V ANR + Sbjct 78 PAATAMAAAAAPYASWLSTAATRALSAVAQAKAAAAVYEAARAATVDPLLVAANRHQLVS 137 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN 177 L +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 138 LVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPT 197 Query 178 ---------------LGVGNIGNLNVGN-GNTGDYNLGNGNLGNANFGGGNGSAFHGQIS 221 LG+GN G N+ + GN GDYNLGNGN GNAN G GN GQ Sbjct 198 APALASGPAALAIPALGIGNTGIGNIFSIGNIGDYNLGNGNTGNANLGSGN----TGQA- 252 Query 222 SFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANI 281 N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ N Sbjct 253 --NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNR 304 Query 282 GIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSY 341 G GN G N G N G+ N G N G+ N+G N+G+ N+G N G+ Sbjct 305 GSGNVGSF------------NFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNN 352 Query 342 NFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSG 401 N G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G NSG Sbjct 353 NLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSG 412 Query 402 VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGG 461 +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 413 DSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG---------- 462 Query 462 IINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTT 521 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG+ Sbjct 463 FENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPV 522 Query 522 DGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYNNSV 575 D NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 523 DQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV------- 575 Query 576 SVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNS 635 G N GT GF +G NTGF +G GN N + TSG NSG SGGFN+ Sbjct 576 ----GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGGFNA 626 Query 636 IDFVSGFFH 644 + SGFF Sbjct 627 GNDQSGFFD 635 >gi|240169655|ref|ZP_04748314.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=1081 Score = 393 bits (1010), Expect = 5e-107, Method: Compositional matrix adjust. Identities = 350/687 (51%), Positives = 398/687 (58%), Gaps = 95/687 (13%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NSLRM+ GAGS P+L AA AWDGL+ EL +AASSF SVT LAG AWQGPA+ Sbjct 3 FSVLPPEINSLRMFSGAGSAPMLQAATAWDGLSAELGSAASSFSSVTFGLAGQAWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AMA AA PYA WL A A+A AA QA A A F+ A +V P VV ANR L + Sbjct 63 QAMAAAAAPYAGWLNVAAARAAGAADQANAVASVFDAARTAMVRPVVVAANRNEFVQLVM 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPAL---------- 173 SN+FGQNAPAIAA E+ YE MWA VA MAGYH+ S A QLASW+ AL Sbjct 123 SNLFGQNAPAIAAAEAEYEGMWASAVATMAGYHSGVSVIAGQLASWRGALQGVAGQVGGA 182 Query 174 ------------------------------PNINLGVGNIGNLNVGNGNTGDYNLGNGNL 203 P IN G GN G NVG GN G+YNLG+GN Sbjct 183 VSASPIGAAAAAVGSTVAASPVAAAAASILPAINTGFGNTGAWNVGIGNIGNYNLGSGNH 242 Query 204 GNANFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGG 263 G+ NFG GN + N+GSGN+ N NLGSGN FN+G+GN G+ N+G Sbjct 243 GDLNFGSGN-------YGNANLGSGNVANGNLGSGN------RGFFNLGNGNFGSLNLGN 289 Query 264 GNSGDNNFGFGNFG----NANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTG 319 GN GD NFG GN G N N G GN G N N+G GN + NFG GN G Sbjct 290 GNRGDLNFGSGNTGPVDGNRNFGFGNWG------------NANLGSGNHSSNNFGFGNWG 337 Query 320 NANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGN 379 N+G GN G N+GFGN GS N GFGN GNNNIG GLTG NQ+G GGLNSG GNIGFGN Sbjct 338 PMNMGSGNHGSYNIGFGNFGSKNLGFGNHGNNNIGFGLTGDNQVGIGGLNSGIGNIGFGN 397 Query 380 SGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGN 439 SG NIG FNSG NFG NSG N G ANSGNINTGF N+G NTG GN +++ GFGN Sbjct 398 SGNNNIGLFNSGDNNFGFFNSGSGNFGFANSGNINTGFWNAGNWNTGAGNGGNLDFGFGN 457 Query 440 SGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFAN 499 G + G GN G N G FN G NTG FNSG G+F NSG NS NTGF N Sbjct 458 GGIKDVGFGNGGSDNMGFFNSGDFNTGDFNSGG---GTFGTSAGNSGSFNSSPNNTGFFN 514 Query 500 SGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN-LQI 558 SG NTG FNAG++NTGFG++ D G SGF N G+ SGFNN+G SG QN L + Sbjct 515 SGATNTGLFNAGSVNTGFGSSIDQPGSVSGFNNTGTDVSGFNNTGPATSGFQNTNTGLGL 574 Query 559 -SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNS 617 SG NSG G+ NS ++ SG+ NKGT F G SG Sbjct 575 NSGIGNSGDGDAGWFNSGTINSGWFNKGTNDF----------GLAHSG-----------E 613 Query 618 ATSGFGNSGKQDSGGFNSIDFVSGFFH 644 SG N+G SG FN+ D SGF H Sbjct 614 LVSGIANAGMFSSGFFNTGDNQSGFLH 640 Score = 280 bits (716), Expect = 6e-73, Method: Compositional matrix adjust. Identities = 248/501 (50%), Positives = 295/501 (59%), Gaps = 57/501 (11%) Query 147 QDVAVMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNA 206 Q + A + A L+ ++P IN G GN G+ N+G GN GD+N G+GN G+ Sbjct 635 QSGFLHAILPTVALPALPHLSVPAISIPGINTGFGNTGSWNLGMGNIGDFNPGSGNTGDF 694 Query 207 NFGGGNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNS 266 NFG GN FNVGSGN GN NLGSGN FN+GSGN+G AN G GN Sbjct 695 NFGSGN-------TGGFNVGSGNFGNANLGSGN------RGFFNLGSGNLGTANFGIGNF 741 Query 267 GDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLG 326 GD N GFGN N N+G GN G GNVG N G+ NFGGGN G++N+G G Sbjct 742 GDLNLGFGNLNNGNVGFGNFGA------------GNVGSANRGSFNFGGGNFGSSNVGSG 789 Query 327 NVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIG 386 N G N+GFGN G+ NFGFGN GNNNIG GLTG N IG GGLN+G+ NIGFGNSG NIG Sbjct 790 NHGSHNLGFGNLGNNNFGFGNHGNNNIGFGLTGDNMIGIGGLNAGANNIGFGNSGNNNIG 849 Query 387 FFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTG 446 FFNSG N G NSG N G ANSG+++TGF N+G NTGFGN N GFGN+G+ N G Sbjct 850 FFNSGDNNVGFFNSGNANYGFANSGSVDTGFWNTGSHNTGFGNGSDSNFGFGNAGRFNVG 909 Query 447 IGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTG 506 GN+G N G N G NTGSFN SF G N+G+ NSG NTG+ NSG++NTG Sbjct 910 AGNSGLDNMGFGNSGTRNTGSFN-------SFAGDGVNTGWFNSGNENTGWFNSGDLNTG 962 Query 507 GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQ 566 FNAG++NTGFG++ D G SGFGN G+ +SGF NSG Sbjct 963 LFNAGSVNTGFGSSIDQPGTVSGFGNTGT---------------------NMSGFYNSGT 1001 Query 567 SVTGYNNSV--SVTSGFGNKGTGLFSGFM-SGFGNTGFLQSGFGNLEANPDNNSATSGFG 623 +G+ NS + SG N G G +GF +G NTG SG N ++ S SG Sbjct 1002 DTSGFQNSTGGAYVSGVQNTGNGALAGFFNTGIANTGIANSGSDNAGV-GNSGSDNSGVQ 1060 Query 624 NSGKQDSGGFNSIDFVSGFFH 644 NSG SGGFN+ D SGFFH Sbjct 1061 NSGTFSSGGFNTGDSQSGFFH 1081 Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 226/568 (40%), Positives = 268/568 (48%), Gaps = 114/568 (20%) Query 170 QPALPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGN-GSAFHGQISS------ 222 Q + +N G+GNIG N GN N G +N G+ N G N G GN G A G I++ Sbjct 380 QVGIGGLNSGIGNIGFGNSGNNNIGLFNSGDNNFGFFNSGSGNFGFANSGNINTGFWNAG 439 Query 223 -FNVGSGNIGNFNLGSGNG---NVGIG------PSSFNVGSGNIGNANVGGG-------- 264 +N G+GN GN + G GNG +VG G FN G N G+ N GGG Sbjct 440 NWNTGAGNGGNLDFGFGNGGIKDVGFGNGGSDNMGFFNSGDFNTGDFNSGGGTFGTSAGN 499 Query 265 ----NSGDNNFGFGNFGNANIGIGNAGPNMSS--PAVPTPGNGNVGIGNGGNGNFGGGNT 318 NS NN GF N G N G+ NAG + ++ PG+ + G N G G NT Sbjct 500 SGSFNSSPNNTGFFNSGATNTGLFNAGSVNTGFGSSIDQPGSVS-GFNNTGTDVSGFNNT 558 Query 319 GNA-------------NIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGL-------- 357 G A N G+GN GDG+ G+ NSG+ N G+ N G N+ G+ Sbjct 559 GPATSGFQNTNTGLGLNSGIGNSGDGDAGWFNSGTINSGWFNKGTNDFGLAHSGELVSGI 618 Query 358 ------------TGSNQIGF-----------------------GGLNSGSGNIGFGNSGT 382 TG NQ GF G+N+G GN G N G Sbjct 619 ANAGMFSSGFFNTGDNQSGFLHAILPTVALPALPHLSVPAISIPGINTGFGNTGSWNLGM 678 Query 383 GNIGFFNSGSG-----NFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGF 437 GNIG FN GSG NFG GN+G N G N GN N G GN GF N G GN + N G Sbjct 679 GNIGDFNPGSGNTGDFNFGSGNTGGFNVGSGNFGNANLGSGNRGFFNLGSGNLGTANFGI 738 Query 438 GNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGF 497 GN G N G GN + N G N G N GS N G+FN G N G +N G N G N GF Sbjct 739 GNFGDLNLGFGNLNNGNVGFGNFGAGNVGSANRGSFNFGGGNFGSSNVGSGNHGSHNLGF 798 Query 498 ANSGNINTGGFNAGNLNTGFGNTTDGL---------GENSGFGNAGSGNSGFNNSGRGNS 548 N GN N G N GN N GFG T D + N GFGN+G+ N GF NSG N Sbjct 799 GNLGNNNFGFGNHGNNNIGFGLTGDNMIGIGGLNAGANNIGFGNSGNNNIGFFNSGDNNV 858 Query 549 GAQNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 608 G N GN GFANSG TG+ N+ S +GFGN F GFGN G G GN Sbjct 859 GFFNSGNANY-GFANSGSVDTGFWNTGSHNTGFGNGSDSNF-----GFGNAGRFNVGAGN 912 Query 609 LEANPDNNSATSGFGNSGKQDSGGFNSI 636 + DN GFGNSG +++G FNS Sbjct 913 --SGLDN----MGFGNSGTRNTGSFNSF 934 >gi|183984190|ref|YP_001852481.1| PPE family protein [Mycobacterium marinum M] gi|183177516|gb|ACC42626.1| PPE family protein [Mycobacterium marinum M] Length=728 Score = 393 bits (1010), Expect = 5e-107, Method: Compositional matrix adjust. Identities = 362/749 (49%), Positives = 435/749 (59%), Gaps = 131/749 (17%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS R++ GAGS P+L AA AWDGLA EL +AA SFGSVTS L GG+WQGPA+ Sbjct 3 FSILPPEINSARIFAGAGSGPMLQAAAAWDGLAAELSSAADSFGSVTSGLVGGSWQGPAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM AA PY++WL+ A A+A+ AA QA+ A FE A A ++HP V NR + L Sbjct 63 AAMTAAAAPYSAWLSVAAARAQSAAGQAKTVASTFEAAWAAMIHPVAVGQNRSQFVSLVR 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQ------PALPNIN 177 SN+FG NAPAIAA+E+ YEQMWAQDVA M+GYHA SA+AA LA WQ P L +N Sbjct 123 SNLFGFNAPAIAAVEAQYEQMWAQDVAAMSGYHAGVSASAAALAPWQTVLQNLPGLSGVN 182 Query 178 LGVGNIGNLNVGNGNTGDYNLGNGN-----------------LGNANFGGGNGSAFHGQ- 219 LG+GNIGN NVG+GN G YN G GN GN+N G GNG+A G Sbjct 183 LGIGNIGNFNVGSGNFGSYNFGGGNSGPSSTSGGIGNIGFGNYGNSNVGAGNGNAALGVP 242 Query 220 ------ISSFNVGSGNIGNFNLGSGN---GNVGIG-----------PSSFNVGSGNIGNA 259 SS+NVG+GNIG FN+G GN GN+G G PS+ NVG+ NIG+ Sbjct 243 GSSYPGASSYNVGAGNIGQFNIGLGNFGSGNIGFGNGNLVTAVAGNPSASNVGAANIGSH 302 Query 260 NVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIG----NGGNGNFGG 315 N G GN G NN G GN GN NIGIG +G N +GIG NG N G Sbjct 303 NWGIGNIGINNIGLGNVGNNNIGIGLSGDNQ------------IGIGGFNANGAGWNLGF 350 Query 316 GNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNI 375 GN G+ NIGLGN G+GN+ G NTG+ NIGIGLTG NQIGFGG NSG+GN Sbjct 351 GNDGSFNIGLGNTGNGNI----------GLANTGDGNIGIGLTGDNQIGFGGWNSGAGNT 400 Query 376 GFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNT 435 G NSG GN GFFNSGS N+G+ N+G TN G NSG++NTG GN+G NTG+ NA SVN Sbjct 401 GLFNSGAGNSGFFNSGSDNWGLANTGSTNWGAVNSGSLNTGIGNTGSTNTGWWNAGSVND 460 Query 436 GFGNSGQANTGIG---------------------------NAGDFNTGNFNGGIINTGSF 468 G N+G AN G+ NAG+ N G FN G N G Sbjct 461 GLFNAGNANLGLANSGNGNLGGFNSGGGTSALFGHDIGFFNAGNHNVGMFNAGFANVGWA 520 Query 469 NSGAFNSGSFN--GGDA-------------NSGFLNSGLTNTGFANSGNINTGGFNAGNL 513 N+G N+G+FN G DA N+GF N+G NTG N+G+ NTG +N GN+ Sbjct 521 NAGIGNTGAFNVGGNDANPVTGAGTIGQAGNTGFFNAGYANTGLFNAGDSNTGLWNTGNV 580 Query 514 NTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTG--- 570 NTG G T G NSGFGN+G+GNSGF NSG NSG N S + Sbjct 581 NTGVGGTGTHSG-NSGFGNSGTGNSGFFNSGSYNSGLINSSAGGYSSGVGNSGGGGYNVG 639 Query 571 -YNNSVSVT-SGFGNKGT-GLFSGFMS-----------GFGNTGFLQSGFGNLEANPDNN 616 +N+S T +GF N G GL G++S G+ NTG SG N + Sbjct 640 FFNSSAGGTDTGFFNYGDGGLHVGWLSSGDHVVGLASTGYYNTGLFNSGDHNTGVG-NQG 698 Query 617 SATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 S +SGFGNSG +SGGFN+ D+ SGFF R Sbjct 699 SNSSGFGNSGHYNSGGFNAGDYQSGFFGR 727 >gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308370051|ref|ZP_07420132.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308370629|ref|ZP_07422169.2| PPE family protein [Mycobacterium tuberculosis SUMu003] 11 more sequence titles Length=619 Score = 391 bits (1004), Expect = 3e-106, Method: Compositional matrix adjust. Identities = 355/672 (53%), Positives = 411/672 (62%), Gaps = 82/672 (12%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 M+ F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQG Sbjct 1 MMSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQG 60 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PA+ AMA AA PYASWL+ A +A AA QA+AAA +E A A V P +V ANR + Sbjct 61 PAATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQLVS 120 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN 177 L +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 121 LVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPT 180 Query 178 ---------------LGVGNIGNLNVGN----GNTGDYNLGNGNLGNANFGGGNGSAFHG 218 LG+GN G +GN GN GDYNLGNGN GNAN G GN G Sbjct 181 APALASGPAALAIPALGIGNTG---IGNIFSIGNIGDYNLGNGNTGNANLGSGN----TG 233 Query 219 QISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGN 278 Q N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ Sbjct 234 QA---NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGD 284 Query 279 ANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNS 338 N G GN G N G N G+ N G N G+ N+G N+G+ N+G N Sbjct 285 GNRGSGNVGS------------FNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANL 332 Query 339 GSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVG 398 G+ N G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G Sbjct 333 GNNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFF 392 Query 399 NSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNF 458 NSG +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 393 NSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG------- 445 Query 459 NGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFG 518 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG Sbjct 446 ---FENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFG 502 Query 519 NTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYN 572 + D NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 503 SPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV---- 558 Query 573 NSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGG 632 G N GT GF +G NTGF +G GN N + TSG NSG SGG Sbjct 559 -------GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGG 606 Query 633 FNSIDFVSGFFH 644 FN+ + SGFF Sbjct 607 FNAGNDQSGFFD 618 >gi|148822348|ref|YP_001287102.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253799824|ref|YP_003032825.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254364039|ref|ZP_04980085.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] 15 more sequence titles Length=636 Score = 389 bits (998), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 353/669 (53%), Positives = 411/669 (62%), Gaps = 76/669 (11%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 ++ F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQG Sbjct 18 VMSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQG 77 Query 61 PASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 PA+ AMA AA PYASWL+ A +A AA QA+AAA +E A A V P +V ANR + Sbjct 78 PAATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQLVS 137 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN 177 L +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 138 LVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPT 197 Query 178 ---------------LGVGNIGNLNVGN-GNTGDYNLGNGNLGNANFGGGNGSAFHGQIS 221 LG+GN G N+ + GN GDYNLGNGN GNAN G GN GQ Sbjct 198 APALASGPAALAIPALGIGNTGIGNIFSIGNIGDYNLGNGNTGNANLGSGN----TGQA- 252 Query 222 SFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANI 281 N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ N Sbjct 253 --NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNR 304 Query 282 GIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSY 341 G GN G N G N G+ N G N G+ N+G N+G+ N+G N G+ Sbjct 305 GSGNVGSF------------NFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNN 352 Query 342 NFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSG 401 N G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G NSG Sbjct 353 NLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSG 412 Query 402 VTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGG 461 +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 413 DSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG---------- 462 Query 462 IINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTT 521 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG+ Sbjct 463 FENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPV 522 Query 522 DGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYNNSV 575 D NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 523 DQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV------- 575 Query 576 SVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNS 635 G N GT GF +G NTGF +G GN N + TSG NSG SGGFN+ Sbjct 576 ----GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGGFNA 626 Query 636 IDFVSGFFH 644 + SGFF Sbjct 627 GNDQSGFFD 635 >gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M] gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M] Length=632 Score = 388 bits (996), Expect = 2e-105, Method: Compositional matrix adjust. Identities = 338/688 (50%), Positives = 403/688 (59%), Gaps = 101/688 (14%) Query 2 VGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGP 61 + FA LPPE NSLR++ GAGS P+L AA AWDGL+ EL AA SF SVTS L G AWQG Sbjct 1 MSFAVLPPEINSLRIFAGAGSAPMLEAAVAWDGLSAELGTAAESFASVTSGLTGQAWQGA 60 Query 62 ASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 A+ AMA A PY+SWL+AA A+A AA QA+ A AFE A + +VHP V ANR L Sbjct 61 AAKAMAAVAAPYSSWLSAAAARAAGAAGQAKMVASAFEAARSAMVHPLAVAANRNVFVQL 120 Query 122 AVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINLGVG 181 +SN+FGQNAPAIAA E TYE+MWA DVA M GYH +SAAA+ L SWQ AL + G+G Sbjct 121 VMSNLFGQNAPAIAATEGTYEEMWAADVAAMVGYHGGASAAASGLPSWQQALSGL-PGIG 179 Query 182 -----------NIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNI 230 N+ +N G GN+G +NLG GN G SFN+GSGN Sbjct 180 QAAAAPAAALFNLPTVNTGLGNSGQWNLGGGNNG-----------------SFNLGSGNF 222 Query 231 GNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNM 290 GN NLG G NIGN N+GGGN FGF N GN NIG N G Sbjct 223 GNLNLGGG----------------NIGNLNLGGGN-----FGFANLGNGNIGNTNFGSGN 261 Query 291 SSPAVPTPG---NGNVGIGNGGNGNFG------------GGNTGNANIG---LG--NVGD 330 + G +GN G+GN G+GNFG G N G+AN+G LG N+G Sbjct 262 NGNLNFGGGNLGSGNFGLGNFGSGNFGNANGMDPVSFSTGNNIGDANLGAFNLGSANIGL 321 Query 331 GNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNS 390 N+G N G+ NFGFGN GNNNIG GLTG NQ+G G LN+G+GN GFGNSG NIGFFNS Sbjct 322 SNIGLANIGNNNFGFGNVGNNNIGFGLTGDNQVGIGSLNAGTGNFGFGNSGDNNIGFFNS 381 Query 391 GSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNA 450 GSGN GV NSG NTG NSG +N+GF NSG +NTGFGNA + N GF N+G +N G NA Sbjct 382 GSGNVGVFNSGDGNTGFGNSGGVNSGFWNSGGLNTGFGNAGANNLGFSNAGSSNVGDSNA 441 Query 451 GDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNA 510 G N G+ N G NTG FNSG S +F GG N+GF NSG NTG N+G++NTG N+ Sbjct 442 GGSNMGSGNAGYSNTGFFNSGG--SATFIGG--NTGFFNSGDLNTGGGNAGSVNTGFLNS 497 Query 511 GNLNTGFGNTTDGLG-ENSGFGNAGSGNSGFNNS-----GRGNSGAQNV--GNLQI-SGF 561 G+ NT G+ G SGF N G SGFNN+ G G SG QN+ G + SGF Sbjct 498 GDFNTTVGSADTPAGATQSGFWNTGDNVSGFNNTNDAMFGGGVSGFQNMNTGFFSVGSGF 557 Query 562 ANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGF----GNLEANPDNNS 617 N+G+ G+NN+ GTG F +G GNTG +GF + Sbjct 558 GNTGEYQVGFNNA----------GTG----FNTGVGNTGSFNTGFNVTGSGSSGFGHSGD 603 Query 618 ATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 +SG NSG SG FN D +GFF + Sbjct 604 GSSGLANSGDSSSGAFNETDNTAGFFGQ 631 >gi|340626147|ref|YP_004744599.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004337|emb|CCC43480.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=618 Score = 387 bits (995), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 353/668 (53%), Positives = 410/668 (62%), Gaps = 76/668 (11%) Query 2 VGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGP 61 + F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQGP Sbjct 1 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQGP 60 Query 62 ASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 A+ AMA AA PYASWL+ A +A AA QA+AAA +E A A V P +V ANR + L Sbjct 61 AATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQLVSL 120 Query 122 AVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN- 177 +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 121 VLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPTA 180 Query 178 --------------LGVGNIGNLNVGN-GNTGDYNLGNGNLGNANFGGGNGSAFHGQISS 222 LG+GN G N+ + GN GDYNLGNGN GNAN G GN GQ Sbjct 181 PALASGPAALAIPALGIGNTGIGNIFSIGNIGDYNLGNGNTGNANLGSGN----TGQA-- 234 Query 223 FNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ N G Sbjct 235 -NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNRG 287 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GN G N G N G+ N G N G+ N+G N+G+ N+G N G+ N Sbjct 288 SGNVGS------------FNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNN 335 Query 343 FGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G NSG Sbjct 336 LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGD 395 Query 403 TNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGI 462 +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 396 SNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG----------F 445 Query 463 INTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTD 522 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG+ D Sbjct 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVD 505 Query 523 GLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYNNSVS 576 NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 506 QPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV-------- 557 Query 577 VTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSI 636 G N GT GF +G NTGF +G GN N + TSG NSG SGGFN+ Sbjct 558 ---GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGGFNTG 609 Query 637 DFVSGFFH 644 + SGFF Sbjct 610 NDQSGFFD 617 >gi|31792329|ref|NP_854822.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116833|ref|YP_177790.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|121637067|ref|YP_977290.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 26 more sequence titles Length=618 Score = 387 bits (994), Expect = 3e-105, Method: Compositional matrix adjust. Identities = 353/668 (53%), Positives = 410/668 (62%), Gaps = 76/668 (11%) Query 2 VGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGP 61 + F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQGP Sbjct 1 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQGP 60 Query 62 ASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 A+ AMA AA PYASWL+ A +A AA QA+AAA +E A A V P +V ANR + L Sbjct 61 AATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQLVSL 120 Query 122 AVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN- 177 +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 121 VLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPTA 180 Query 178 --------------LGVGNIGNLNVGN-GNTGDYNLGNGNLGNANFGGGNGSAFHGQISS 222 LG+GN G N+ + GN GDYNLGNGN GNAN G GN GQ Sbjct 181 PALASGPAALAIPALGIGNTGIGNIFSIGNIGDYNLGNGNTGNANLGSGN----TGQA-- 234 Query 223 FNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIG 282 N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ N G Sbjct 235 -NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNRG 287 Query 283 IGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYN 342 GN G N G N G+ N G N G+ N+G N+G+ N+G N G+ N Sbjct 288 SGNVGS------------FNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNN 335 Query 343 FGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G NSG Sbjct 336 LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGD 395 Query 403 TNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGI 462 +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 396 SNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG----------F 445 Query 463 INTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTD 522 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG+ D Sbjct 446 ENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGSPVD 505 Query 523 GLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYNNSVS 576 NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 506 QPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV-------- 557 Query 577 VTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGFNSI 636 G N GT GF +G NTGF +G GN N + TSG NSG SGGFN+ Sbjct 558 ---GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGGFNAG 609 Query 637 DFVSGFFH 644 + SGFF Sbjct 610 NDQSGFFD 617 >gi|289569131|ref|ZP_06449358.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542885|gb|EFD46533.1| PPE family protein [Mycobacterium tuberculosis T17] Length=618 Score = 387 bits (994), Expect = 4e-105, Method: Compositional matrix adjust. Identities = 354/671 (53%), Positives = 410/671 (62%), Gaps = 82/671 (12%) Query 2 VGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGP 61 + F LPPE NS M+ GAGS P LAAA AWDGLA EL AA+SF S T+ LA AWQGP Sbjct 1 MSFLVLPPEDNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALADTAWQGP 60 Query 62 ASAAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLL 121 A+ AMA AA PYASWL+ A +A AA QA+AAA +E A A V P +V ANR + L Sbjct 61 AATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQLVSL 120 Query 122 AVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPA---LPNIN- 177 +SN+FGQNAPAIAA E+ YEQ+WA DVA M YH+ +SA AAQLA W A LPN Sbjct 121 VLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPNPTA 180 Query 178 --------------LGVGNIGNLNVGN----GNTGDYNLGNGNLGNANFGGGNGSAFHGQ 219 LG+GN G +GN GN GDYNLGNGN GNAN G GN GQ Sbjct 181 PALASGPAALAIPALGIGNTG---IGNIFSIGNIGDYNLGNGNTGNANLGSGN----TGQ 233 Query 220 ISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNA 279 N+GSGN G FN GSGN ++ N GSGN+GN N+G GN G+ NFG GN G+ Sbjct 234 A---NLGSGNTGFFNFGSGN------TANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDG 284 Query 280 NIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSG 339 N G GN G N G N G+ N G N G+ N+G N+G+ N+G N G Sbjct 285 NRGSGNVGS------------FNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLG 332 Query 340 SYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGN 399 + N G N GNNNIGIGLTG N IG G LNSG GN+GFGNSG NIG FNSG+ N G N Sbjct 333 NNNLGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFN 392 Query 400 SGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFN 459 SG +N G NSG+ NTGFGN+GF NTGFGNA S N GFGN+G N G GN+G Sbjct 393 SGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSGNFGFGNAGNNNFGFGNSG-------- 444 Query 460 GGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGN 519 N G NSGA+N+GSFN G N+G LNSG NTG+ANSG+INTGGF++G+LNTGFG+ Sbjct 445 --FENMGVGNSGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGS 502 Query 520 TTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN----LQISGFANS--GQSVTGYNN 573 D NSGFGN G+GNSGFNNSG NSG QN + SG NS GQ V Sbjct 503 PVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHV----- 557 Query 574 SVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGF 633 G N GT GF +G NTGF +G GN N + TSG NSG SGGF Sbjct 558 ------GISNSGT----GFNTGLFNTGFNNTGIGNSATNAA-FTTTSGVANSGDNSSGGF 606 Query 634 NSIDFVSGFFH 644 N+ + SGFF Sbjct 607 NAGNDQSGFFD 617 >gi|183984524|ref|YP_001852815.1| PPE family protein [Mycobacterium marinum M] gi|183177850|gb|ACC42960.1| PPE family protein [Mycobacterium marinum M] Length=668 Score = 382 bits (982), Expect = 9e-104, Method: Compositional matrix adjust. Identities = 360/691 (53%), Positives = 418/691 (61%), Gaps = 79/691 (11%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ PPE NSLRM+ GAGS P+L AA AW+GLA EL +AA SF SVTS L G AWQGPAS Sbjct 3 FSIFPPEINSLRMFTGAGSAPMLQAAAAWEGLAGELGSAADSFASVTSGLVGQAWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAMA A PY SWL+AA AQA AA A+ A AFE A A V PA V ANR + + Sbjct 63 AAMAAAVAPYTSWLSAAAAQAVGAAGAAKMVASAFEAARAATVLPAAVAANRNALVQMVM 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNINL----- 178 SN+FGQNAPAIAA E+ YE+MWAQDVA M GYH+ +SA AA L+ W+ L N+ Sbjct 123 SNIFGQNAPAIAAAEAAYEEMWAQDVAAMFGYHSGASAVAAALSPWEQLLQNVPALSPLA 182 Query 179 GVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGN--------- 229 +GN+G N+G GNTG NLGNGN GN NFGGGN I +FN GSGN Sbjct 183 AIGNLGAGNLGFGNTGIANLGNGNTGNLNFGGGN-------IGNFNFGSGNRGGNVNFGN 235 Query 230 ------------IGNFNLGSGN---GNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFG 274 IG+ N GSGN GN+G G + G AN+GGGNSG N GFG Sbjct 236 GNNGFFNLGGGNIGSNNFGSGNRGNGNIGFGNYQ------STGGANIGGGNSGSGNKGFG 289 Query 275 NFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVG 334 N GN NIG GN G N G GN G+ NFG GNT + N+G GN+G NVG Sbjct 290 NTGNYNIGSGNFGSF------------NFGDGNRGSNNFGFGNTNSGNVGFGNLGANNVG 337 Query 335 FGNSGSYNFGFGNTGNNNIGIGLTGSNQIG--FGGLNSGSGNIGFGNSGTGNIGFFNSGS 392 FGN GS N GFGNTGNNN GIGL+G++Q+G F GLN GSGNIG NSG N+GFFNSG Sbjct 338 FGNLGSGNVGFGNTGNNNFGIGLSGNDQVGINFNGLNGGSGNIGLFNSGNNNVGFFNSGD 397 Query 393 GNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSV----------NTGFGNSGQ 442 GN+G+GNSG TNTG+ NSG+ NTGF N+ +NTG N+ + + GF N+G Sbjct 398 GNWGIGNSGDTNTGIGNSGSFNTGFVNAASLNTGMANSANTCLGVGNSGAGDVGFMNAGH 457 Query 443 ANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGN 502 N G+GNAG FN G N G N G N+G N G N G N+GFLNSG NTGF NSG+ Sbjct 458 DNVGLGNAGSFNMGFGNAGSGNVGYENAGGANVGFGNSGSDNTGFLNSGSVNTGFLNSGS 517 Query 503 INTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFA 562 NTG N+G +NTGFG TD NSGFGN GSGNSGFNN G NSG QN G GF Sbjct 518 TNTGAGNSGEVNTGFGIATDSGATNSGFGNTGSGNSGFNNDGNDNSGFQNTG-TSSEGFG 576 Query 563 NSGQSVTGYNNSVSVTSGFGNKGT---------GLFSGFM--SGFGNTGFLQSGFGNLEA 611 N G + TG+ N+ +GF N GT L GF +G GN G + +G N Sbjct 577 NVGNNQTGFQNTGGTNTGFFNTGTNDVGVGNSANLNIGFWNSTGAGNVGVMNTGTDN-SG 635 Query 612 NPDNNSATSGFGNSGKQDSGGFNSIDFVSGF 642 +A SGF NSG SGG N D SGF Sbjct 636 FIQTGTANSGFANSGTSSSGGLNKGDQQSGF 666 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 158/377 (42%), Positives = 188/377 (50%), Gaps = 81/377 (21%) Query 305 IGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFG-------------------- 344 IGN G GN G GNTG AN+G GN G+ N G GN G++NFG Sbjct 184 IGNLGAGNLGFGNTGIANLGNGNTGNLNFGGGNIGNFNFGSGNRGGNVNFGNGNNGFFNL 243 Query 345 -FGNTGNNNIGIGLTGSNQIGFGGLNS-GSGNIG----------FGNSGTGNIGFFNSGS 392 GN G+NN G G G+ IGFG S G NIG FGN+G NIG N GS Sbjct 244 GGGNIGSNNFGSGNRGNGNIGFGNYQSTGGANIGGGNSGSGNKGFGNTGNYNIGSGNFGS 303 Query 393 GNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGD 452 NFG GN G N G N+ + N GFGN G N GFGN S N GFGN+G N GIG +G+ Sbjct 304 FNFGDGNRGSNNFGFGNTNSGNVGFGNLGANNVGFGNLGSGNVGFGNTGNNNFGIGLSGN 363 Query 453 FNTG-NFNG---GIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGF 508 G NFNG G N G FNSG N G FN GD N G NSG TNTG NSG+ NTG Sbjct 364 DQVGINFNGLNGGSGNIGLFNSGNNNVGFFNSGDGNWGIGNSGDTNTGIGNSGSFNTGFV 423 Query 509 NAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSV 568 NA +LNTG N+ + G GN+G+G+ GF N+G N G N G+ + Sbjct 424 NAASLNTGMANSANTC---LGVGNSGAGDVGFMNAGHDNVGLGNAGSFNM---------- 470 Query 569 TGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQ 628 GFGN G+G N G+ +G N+ GFGNSG Sbjct 471 -----------GFGNAGSG----------NVGYENAGGANV-----------GFGNSGSD 498 Query 629 DSGGFNSIDFVSGFFHR 645 ++G NS +GF + Sbjct 499 NTGFLNSGSVNTGFLNS 515 Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 110/265 (42%), Positives = 144/265 (55%), Gaps = 23/265 (8%) Query 175 NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFN-----VGSGN 229 + N G+GN G+ N G N N G N N G GN A G + N VG GN Sbjct 407 DTNTGIGNSGSFNTGFVNAASLNTGMANSANTCLGVGNSGA--GDVGFMNAGHDNVGLGN 464 Query 230 IGNFNLGSGN---GNVGIGPSS-FNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGN 285 G+FN+G GN GNVG + NVG GN G+ N G NSG N GF N G+ N G GN Sbjct 465 AGSFNMGFGNAGSGNVGYENAGGANVGFGNSGSDNTGFLNSGSVNTGFLNSGSTNTGAGN 524 Query 286 AGPNMSSPAVPTP-----------GNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVG 334 +G + + T G+GN G N GN N G NTG ++ G GNVG+ G Sbjct 525 SGEVNTGFGIATDSGATNSGFGNTGSGNSGFNNDGNDNSGFQNTGTSSEGFGNVGNNQTG 584 Query 335 FGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSGN 394 F N+G N GF NTG N++G+G + + IGF ++G+GN+G N+GT N GF +G+ N Sbjct 585 FQNTGGTNTGFFNTGTNDVGVGNSANLNIGFWN-STGAGNVGVMNTGTDNSGFIQTGTAN 643 Query 395 FGVGNSGVTNTGVANSGNINTGFGN 419 G NSG +++G N G+ +GFGN Sbjct 644 SGFANSGTSSSGGLNKGDQQSGFGN 668 >gi|240172871|ref|ZP_04751530.1| PPE family protein [Mycobacterium kansasii ATCC 12478] Length=676 Score = 381 bits (979), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 358/673 (54%), Positives = 414/673 (62%), Gaps = 97/673 (14%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 ++ LPPE NS RM+ GAG+ P+L AA AW GLAEEL +AASSFGS+TS LA AWQGPAS Sbjct 3 YSVLPPEINSSRMFAGAGAAPMLDAAAAWAGLAEELSSAASSFGSLTSGLAAQAWQGPAS 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AM AA PYASWL+AA QA AA QAR AG FE A A V PA V ANR + + Sbjct 63 TAMVAAAAPYASWLSAAATQAVAAAGQARTVAGVFEAARAATVVPAAVAANRNALVQMVL 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI------- 176 SN FG NAPAIA +E YEQMWAQDVA MAGYH +SAAAA LA WQ L NI Sbjct 123 SNWFGLNAPAIAHIEGLYEQMWAQDVAAMAGYHGGASAAAAGLAPWQQLLQNIPGLSALS 182 Query 177 --------NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSG 228 NLG+GNIG+ N+G+GNTG+ N G+GN GN NFG GN S N GSG Sbjct 183 AVGNIGAGNLGLGNIGSGNLGSGNTGNANFGSGNNGNLNFGDGNLSGI------LNFGSG 236 Query 229 NIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDN------------------- 269 N G+FN+GSGN S N G+GN GN N G GNS Sbjct 237 NTGSFNMGSGN------RGSRNFGAGNRGNGNFGFGNSQATGGGNIGSGNSGSGNIGNGN 290 Query 270 ----NFGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGL 325 N G GNFGNAN G GN+GP A+PT GN NVG+ GNTGN+NIG+ Sbjct 291 TGNFNVGSGNFGNANFGFGNSGP----GAMPTAGNSNVGL----------GNTGNSNIGI 336 Query 326 GNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIG--FGGLNSGSGNIGFGNSGTG 383 GN G+ N+G GN+G +N GFGN+GNNN GIGLTG NQ G F GLNSGSGNIG NSG Sbjct 337 GNFGNLNIGLGNTGEFNIGFGNSGNNNFGIGLTGDNQFGINFNGLNSGSGNIGLFNSGDN 396 Query 384 NIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQA 443 N+GFFNSG GN+G+GNSG NTG+ANSGN NTG NSG N+G+ N + N GFGNSG Sbjct 397 NVGFFNSGDGNWGIGNSGDVNTGIANSGNTNTGIMNSGNHNSGWVNTTNTNVGFGNSGHG 456 Query 444 NTGIGNAGD----------FNTGNFNGGIINT-GSFNSGAFNSGSFNGGDANSGFLNSGL 492 N G NAG F G FN G T G FNSGA + G +N G N+GF NSG Sbjct 457 NVGFWNAGSDNVGVGNGGGFAVGAFNSGSSGTVGFFNSGASSVGFYNSGSGNTGFGNSGN 516 Query 493 TNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQ- 551 TNTGF NSG+INTG NAG++NTGFG+ TD NSGFGN G+G SGFNN G SG + Sbjct 517 TNTGFWNSGSINTGAGNAGDVNTGFGSATDTGATNSGFGNTGTGTSGFNNHGNSTSGWEN 576 Query 552 ---------NVGNLQI---------SGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFM 593 N+GN Q +GF+NSG + G++N+ S GF N G GFM Sbjct 577 TGNSSEGYGNIGNFQTGFQNTNSRNTGFSNSGVNSVGFSNTSSFGIGFANGGVTGNVGFM 636 Query 594 -SGFGNTGFLQSG 605 +G N+GF QSG Sbjct 637 NTGTDNSGFGQSG 649 Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 170/394 (44%), Positives = 201/394 (52%), Gaps = 83/394 (21%) Query 288 PNMSS-PAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGN-SGSYNFGF 345 P +S+ AV G GN+G+GN G+GN G GNTGNAN G GN G+ N G GN SG NFG Sbjct 176 PGLSALSAVGNIGAGNLGLGNIGSGNLGSGNTGNANFGSGNNGNLNFGDGNLSGILNFGS 235 Query 346 GNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTG---------------------- 383 GNTG+ N+G G GS G G N G+GN GFGNS Sbjct 236 GNTGSFNMGSGNRGSRNFGAG--NRGNGNFGFGNSQATGGGNIGSGNSGSGNIGNGNTGN 293 Query 384 -NIGFFNSGSGNFGVGNSGV--------TNTGVANSGNINTGFGNSGFINTGFGNALSVN 434 N+G N G+ NFG GNSG +N G+ N+GN N G GN G +N G GN N Sbjct 294 FNVGSGNFGNANFGFGNSGPGAMPTAGNSNVGLGNTGNSNIGIGNFGNLNIGLGNTGEFN 353 Query 435 TGFGNSGQANTGIGNAGDFNTG-NFNG---GIINTGSFNSGAFNSGSFNGGDANSGFLNS 490 GFGNSG N GIG GD G NFNG G N G FNSG N G FN GD N G NS Sbjct 354 IGFGNSGNNNFGIGLTGDNQFGINFNGLNSGSGNIGLFNSGDNNVGFFNSGDGNWGIGNS 413 Query 491 GLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGA 550 G NTG ANSGN NTG N+GN N+G+ NTT+ N GFGN+G GN GF N+G N G Sbjct 414 GDVNTGIANSGNTNTGIMNSGNHNSGWVNTTN---TNVGFGNSGHGNVGFWNAGSDNVGV 470 Query 551 QNVGNLQISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLE 610 N G + F NSG S G GF SG Sbjct 471 GNGGGFAVGAF-NSGSS-----------------------------GTVGFFNSG----- 495 Query 611 ANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 +++ GF NSG ++G NS + +GF++ Sbjct 496 ------ASSVGFYNSGSGNTGFGNSGNTNTGFWN 523 >gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=608 Score = 381 bits (979), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 331/636 (53%), Positives = 384/636 (61%), Gaps = 65/636 (10%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F LPPE NS RM+ GAGS P+L+AA AWDGLA EL +AA SFGSVTS L G +WQG A+ Sbjct 3 FPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGAAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AM+ AA PY SWL AA +A AA QA+ AFE A A ++HP V ANR L + Sbjct 63 TAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQLVL 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI------- 176 +N+FGQNAPAIAA E +YEQMWA DVA M GYH +SAAA+ LASWQ AL + Sbjct 123 TNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAASV 182 Query 177 --NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFN 234 L +GN G N+ GN G +NLG GN GN N GGGN GN N Sbjct 183 ILGLSIGNTGVGNLSIGNIGVFNLGGGNAGNLNLGGGN-----------------TGNAN 225 Query 235 LGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPA 294 LGSGN FN+GSGN GN N G GN G+ N+G GN GNAN+G GN + Sbjct 226 LGSGNNGF------FNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGF 279 Query 295 VPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIG 354 G+ N+G GN GN NFG GN G+ N+G GN G NVGFGN GS N GFGN G+NNIG Sbjct 280 GNRVGDANLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIG 339 Query 355 IGLTGSNQIG--FGGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGVTNTGVANSGN 412 GLTG+NQ+G F GLN G GNI GNSG N+GFFNSGS N G NSG N G ANSG+ Sbjct 340 FGLTGNNQVGINFAGLNGGIGNIDLGNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGD 399 Query 413 INTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGA 472 NTGF N+G +NTGFGN + N GFGN G AN G+GN G N G N G NTGSFNSG Sbjct 400 TNTGFWNAGRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGG 459 Query 473 FNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTDGLGENSGFGN 532 N + + NSG NTGF NSG+ NTG FNAG++NTG G+ G SGFGN Sbjct 460 DNGRNGGNTGS----FNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQPGSISGFGN 515 Query 533 AGSGNSGFNNSGRGNSG-------------AQNVGNLQI---------SGFANSGQSVTG 570 G+G SGFNNSG SG NVG+ Q+ +G ANSG + G Sbjct 516 TGAGVSGFNNSGDATSGFMNVATTFGFASGINNVGDYQVGLFNTGFGNAGIANSGNATFG 575 Query 571 YNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGF 606 NS +++SG N GT GF NTG QSGF Sbjct 576 IANSGALSSGISNSGTNSSGGF-----NTGDDQSGF 606 Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 183/426 (43%), Positives = 216/426 (51%), Gaps = 79/426 (18%) Query 294 AVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNI 353 ++ G GN+ IGN G N GGGN GN N+G GN G+ N+G GN+G +N G GNTGN N Sbjct 187 SIGNTGVGNLSIGNIGVFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNLGSGNTGNTNF 246 Query 354 GIGLTGSNQIGFGGLNSGSGNIGFGN-SGTGNIGFFNS-GSGNFGVGNSGVTNTGVANSG 411 G G G + +G N G+ N+GFGN G GN GF N G N G GN G N G N G Sbjct 247 GNGNRG--NLNWGSGNLGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGNANFGNGNLG 304 Query 412 NINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGD----FNTGNFNGGIINTGS 467 + N G GN+GF N GFGN S N GFGN+G N G G G+ N NGGI N Sbjct 305 DTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIGNIDL 364 Query 468 FNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGN-------- 519 NSG N G FN G N GF NSG N GFANSG+ NTG +NAG +NTGFGN Sbjct 365 GNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNAGRVNTGFGNGGNFNLGF 424 Query 520 -----------------------TTDGLGE-----------------NSGFGNAGSGNSG 539 T+ G NSG+ N G NSG Sbjct 425 GNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGGDNGRNGGNTGSFNSGYVNTGFFNSG 484 Query 540 FNNSGRGNSGAQNVG----NLQ---ISGFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGF 592 N+G N+G+ N G + Q ISGF N+G V+G+NNS TSGF N T GF Sbjct 485 STNTGLFNAGSVNTGIGSPDTQPGSISGFGNTGAGVSGFNNSGDATSGFMNVATTF--GF 542 Query 593 MSGFGNTGFLQ-----SGFGNL-EANPDNNS--------ATSGFGNSGKQDSGGFNSIDF 638 SG N G Q +GFGN AN N + +SG NSG SGGFN+ D Sbjct 543 ASGINNVGDYQVGLFNTGFGNAGIANSGNATFGIANSGALSSGISNSGTNSSGGFNTGDD 602 Query 639 VSGFFH 644 SGFF+ Sbjct 603 QSGFFN 608 Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 125/288 (44%), Positives = 140/288 (49%), Gaps = 59/288 (20%) Query 323 IGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGT 382 + +GN G GN+ GN G +N G GN GN LN G GN G N G+ Sbjct 186 LSIGNTGVGNLSIGNIGVFNLGGGNAGN-----------------LNLGGGNTGNANLGS 228 Query 383 GNIGFFNSGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSV-NTGFGNS- 440 GN GFFN GSGN +G TN G N GN+N G GN G N GFGN L N GFGN Sbjct 229 GNNGFFNLGSGN-----TGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGFGNRV 283 Query 441 GQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANS 500 G AN G GN G+ N GN N G N GS N+G N G N G N GF N+G N GF + Sbjct 284 GDANLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLT 343 Query 501 GNINTGGFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISG 560 GN N G N LN G GN G NSG N G NSG NN G NSG +N G Sbjct 344 GN-NQVGINFAGLNGGIGNIDLG---NSGDNNVGFFNSGSNNVGFFNSGDRNFG------ 393 Query 561 FANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGN 608 FANSG + TG F N G + +GFGN Sbjct 394 FANSGDTNTG-------------------------FWNAGRVNTGFGN 416 >gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacterium marinum M] gi|183177616|gb|ACC42726.1| PPE family protein [Mycobacterium marinum M] Length=1106 Score = 377 bits (968), Expect = 4e-102, Method: Compositional matrix adjust. Identities = 361/675 (54%), Positives = 417/675 (62%), Gaps = 57/675 (8%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F LPPE NS R++ GAG P LAAA AWDGLA +L +AA SF ++T L G AWQG A+ Sbjct 3 FMMLPPEINSARIFAGAGVGPTLAAAAAWDGLAADLASAAQSFSAITVGLVGEAWQGAAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AMA AA PYASWL A A+A + A QA AAA FE A A HP +V ANR + L V Sbjct 63 TAMAAAARPYASWLGTAAARAAVTAAQANAAAAVFEAAQAATAHPELVAANRNQLVSLVV 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNIN------ 177 SN+FGQNAPAIA E+ Y+Q+WAQDVA MAGYH+ +SA AAQLA WQ AL + Sbjct 123 SNLFGQNAPAIALTEAAYDQLWAQDVAAMAGYHSGASAVAAQLAPWQQALRTLQNRVAGA 182 Query 178 --------------------------LGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGG 211 L +GNIG N+ GN GDYNLG+GN G+ N G G Sbjct 183 TTALPSSGPAAAAALPGAAAAVGFPVLHIGNIGFANLSVGNIGDYNLGSGNTGSFNLGSG 242 Query 212 NGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNS-GDNN 270 N I ++GSGN GN NLGSGN FN+GSGN GN N G GN G N Sbjct 243 N-------IGDASLGSGNAGNANLGSGN------QGFFNLGSGNTGNINFGSGNRLGSLN 289 Query 271 FGFGN-FGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVG 329 FGFGN G+AN G GNAG S+ + G+ N G GN G+ NFG GNTG+ N+G GN G Sbjct 290 FGFGNAVGDANFGWGNAGS--SNLGLGNFGSLNWGSGNNGSTNFGSGNTGSLNLGSGNAG 347 Query 330 DGNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFN 389 D NVGFGN GS N GFGN GNNNIGIGL G + IG G LNSG+GN+GFGNSGT NIGFFN Sbjct 348 DSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDLIGIGALNSGAGNLGFGNSGTNNIGFFN 407 Query 390 SGSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGN 449 SG N G NSG N G N+G+INTGF N NTGFGN+ N GFGNSG N G GN Sbjct 408 SGDNNIGFFNSGSGNFGFENAGDINTGFWNGRDTNTGFGNSGLSNFGFGNSGVNNVGAGN 467 Query 450 AGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFN 509 G N G N G++NTGSFNSG FN+G FN G N+G+ NS NTG NSG NTG FN Sbjct 468 GGSSNVGLGNAGLLNTGSFNSGNFNTGDFNSGSMNTGYFNSSGHNTGLGNSGFTNTGFFN 527 Query 510 AGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSV- 568 +G+LNTG G+ D NSGF NAGSGNSGFNN+G +SG N N SGF N+G +V Sbjct 528 SGDLNTGMGSPEDQSVANSGFRNAGSGNSGFNNTGSFSSGFFNSTNSN-SGFLNAGGTVN 586 Query 569 TGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQ 628 +G NNS + +G GN G F F +G NTG S G + TSG NSG Sbjct 587 SGINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFP------YTSGLFNSGNG 640 Query 629 DSGGFNSIDFVSGFF 643 SG FN+ D SGFF Sbjct 641 SSGVFNAGDEQSGFF 655 Score = 260 bits (665), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 260/500 (52%), Positives = 299/500 (60%), Gaps = 60/500 (12%) Query 151 VMAGYHAASSAAAAQLASWQPALPNINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 V+ G ++A + L + LP NLG+GN G N+G GN GDYNLG+GN G+ANFG Sbjct 661 VLTGTDGLAAATTSGLPALD--LPAPNLGIGNAGVGNLGLGNIGDYNLGSGNTGDANFG- 717 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNN 270 G I N+GSGN GN NLGSGN S N GSGNIG N+G GN GD N Sbjct 718 ------FGNIGQANLGSGNAGNTNLGSGN------TGSTNFGSGNIGALNLGSGNHGDAN 765 Query 271 FGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGD 330 GFGNFGN NIG GN G GN G GN G+ N G GN G+ N G GN G+ Sbjct 766 LGFGNFGNGNIGSGNHGA------------GNFGSGNTGSRNLGSGNAGSTNFGSGNHGN 813 Query 331 GNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNS 390 NVG GN G+ N G GN G+NNIG GLTG N +G G LNSG+GN+GFGN+G NIG FNS Sbjct 814 SNVGLGNFGNNNLGLGNNGSNNIGFGLTGDNLVGIGALNSGAGNLGFGNTGDNNIGLFNS 873 Query 391 GSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNA 450 G N G NSG N G+ANSG+ NTG N+G NTGFGNA S + GFGN+G N G GNA Sbjct 874 GDNNVGFFNSGDGNFGLANSGDTNTGLWNAGSTNTGFGNAGSADFGFGNAGDRNMGFGNA 933 Query 451 GDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNA 510 G N G N G NTGSFNSG N+G FNGGD NTG+ NSGN NTGG N+ Sbjct 934 GAANMGAGNSGSYNTGSFNSGTLNTGDFNGGDH----------NTGWGNSGNTNTGGINS 983 Query 511 GNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQI----SGFANSG- 565 G+LNTGFG++ D NSGFGN GSGNSGFNN+G NSG N + SG N+G Sbjct 984 GDLNTGFGSSADQAVTNSGFGNNGSGNSGFNNTGDTNSGFHNANTSALFSGHSGLLNAGG 1043 Query 566 -QSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGN 624 QSV G NN+ S TGLF NTGF +G N N +ATSG N Sbjct 1044 SQSV-GINNTGSFN-------TGLF--------NTGFRTAGIANSATNGL-LTATSGVAN 1086 Query 625 SGKQDSGGFNSIDFVSGFFH 644 SG SGGFN+ SGFF+ Sbjct 1087 SGNNSSGGFNANPDQSGFFN 1106 Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 213/512 (42%), Positives = 256/512 (50%), Gaps = 65/512 (12%) Query 177 NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFNLG 236 N+G+GN G LN G+ N+G++N G+ N G+ N G + S N G GN G N G Sbjct 472 NVGLGNAGLLNTGSFNSGNFNTGDFNSGSMNTG-------YFNSSGHNTGLGNSGFTNTG 524 Query 237 ---SGNGNVGIG-PSSFNVGSGNIGNANVGGGNSGDNNFG-----FGNFGNANIGIGNAG 287 SG+ N G+G P +V N G N G GNSG NN G F N N+N G NAG Sbjct 525 FFNSGDLNTGMGSPEDQSVA--NSGFRNAGSGNSGFNNTGSFSSGFFNSTNSNSGFLNAG 582 Query 288 PNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGN 347 ++S + GN N GIGN G+ NFG N G N G GN G V SG +N G G+ Sbjct 583 GTVNS-GINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFPYTSGLFNSGNGS 641 Query 348 TGNNNIG-----------IGLTGSNQI------GFGGLNSGSGNIGFGNSGTGNIGFFNS 390 +G N G + LTG++ + G L+ + N+G GN+G GN+G N Sbjct 642 SGVFNAGDEQSGFFGTSGLVLTGTDGLAAATTSGLPALDLPAPNLGIGNAGVGNLGLGNI 701 Query 391 GSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNA 450 G N G GN+G N G N G N G GN+G N G GN S N G GN G N G GN Sbjct 702 GDYNLGSGNTGDANFGFGNIGQANLGSGNAGNTNLGSGNTGSTNFGSGNIGALNLGSGNH 761 Query 451 GDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNA 510 GD N G N G N GS N GA N GS N G N G N+G TN G N GN N G N Sbjct 762 GDANLGFGNFGNGNIGSGNHGAGNFGSGNTGSRNLGSGNAGSTNFGSGNHGNSNVGLGNF 821 Query 511 GNLNTGF-------------GNTTDGLGE-NSGFGNAGSGNSGFNNSGRGNSGAQNVGNL 556 GN N G G+ G+G NSG GN G GN+G NN G NSG NVG Sbjct 822 GNNNLGLGNNGSNNIGFGLTGDNLVGIGALNSGAGNLGFGNTGDNNIGLFNSGDNNVGFF 881 Query 557 QIS----GFANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEAN 612 G ANSG + TG N+ S +GFGN G+ F GFGN G GFGN A Sbjct 882 NSGDGNFGLANSGDTNTGLWNAGSTNTGFGNAGSADF-----GFGNAGDRNMGFGNAGA- 935 Query 613 PDNNSATSGFGNSGKQDSGGFNSIDFVSGFFH 644 A G GNSG ++G FNS +G F+ Sbjct 936 -----ANMGAGNSGSYNTGSFNSGTLNTGDFN 962 Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust. Identities = 88/222 (40%), Positives = 102/222 (46%), Gaps = 27/222 (12%) Query 437 FGNSGQANTGIGNAGDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTG 496 GN G AN +GN GD+N G+ N G N GS N G + GS N G+AN G N G N G Sbjct 211 IGNIGFANLSVGNIGDYNLGSGNTGSFNLGSGNIGDASLGSGNAGNANLGSGNQGFFNLG 270 Query 497 FANSGNINTG-GFNAGNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGN 555 N+GNIN G G G+LN GFGN N G+GNAGS N G N G N G+ N G+ Sbjct 271 SGNTGNINFGSGNRLGSLNFGFGNAVGD--ANFGWGNAGSSNLGLGNFGSLNWGSGNNGS 328 Query 556 LQISGFANSGQSVTGYNNSVSVTSGFGN------------KGTGLFSGFMSGFGNTGFLQ 603 G N+G G N+ GFGN G L Sbjct 329 TNF-GSGNTGSLNLGSGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDLIGIGALN 387 Query 604 SGFGNLEANPDNNSATSGFGNSGKQDSGGFNSIDFVSGFFHR 645 SG GNL GFGNSG + G FNS D GFF+ Sbjct 388 SGAGNL-----------GFGNSGTNNIGFFNSGDNNIGFFNS 418 Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust. Identities = 105/251 (42%), Positives = 125/251 (50%), Gaps = 27/251 (10%) Query 397 VGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTG 456 +GN G N V N G+ N G GN+G N G GN + G GN+G AN G GN G FN G Sbjct 211 IGNIGFANLSVGNIGDYNLGSGNTGSFNLGSGNIGDASLGSGNAGNANLGSGNQGFFNLG 270 Query 457 NFNGGIINTGSFNS-GAFNSGSFNG-GDANSGFLNSGLTNTGFANSGNINTGGFNAGNLN 514 + N G IN GS N G+ N G N GDAN G+ N+G +N G N G++N G N G+ N Sbjct 271 SGNTGNINFGSGNRLGSLNFGFGNAVGDANFGWGNAGSSNLGLGNFGSLNWGSGNNGSTN 330 Query 515 TGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSV-TGYNN 573 G GNT N G GNAG N GF N G N G N GN I N + G N Sbjct 331 FGSGNTGS---LNLGSGNAGDSNVGFGNFGSNNVGFGNNGNNNIGIGLNGDDLIGIGALN 387 Query 574 SVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFGNLEANPDNNSATSGFGNSGKQDSGGF 633 S + GFGN GT N GF SG DNN GF NSG + G Sbjct 388 SGAGNLGFGNSGTN----------NIGFFNSG--------DNNI---GFFNSGSGNFGFE 426 Query 634 NSIDFVSGFFH 644 N+ D +GF++ Sbjct 427 NAGDINTGFWN 437 >gi|15841868|ref|NP_336905.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|57116976|ref|YP_177872.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662188|ref|YP_001283711.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 28 more sequence titles Length=615 Score = 370 bits (951), Expect = 3e-100, Method: Compositional matrix adjust. Identities = 357/678 (53%), Positives = 413/678 (61%), Gaps = 97/678 (14%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MV F+ LPPE NS RM+ GAGS P+LAAA AWDGLA EL AA SFG VTS LAGG+ Q Sbjct 1 MVNFSVLPPEINSGRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQA 60 Query 61 PASAAMANAAG---PYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVR 117 AA A PYA WL AA A+A AA QA+A AGAFE A A +V P VV ANR Sbjct 61 WQGAAAAAMVVAAAPYAGWLAAAAARAGGAAVQAKAVAGAFEAARAAMVDPVVVAANRSA 120 Query 118 TWLLAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALP--- 174 L +SNVFGQNAPAIAA E+TYEQMWA DVA M GYH +SAAAA LA WQ A+P Sbjct 121 FVQLVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALAPWQQAVPGLS 180 Query 175 ------------------------NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 +NLGVGNIG+LN+G+GN G N+G+GN+G N Sbjct 181 GLLGGAANAPAAAAQGAAQGLAELTLNLGVGNIGSLNLGSGNIGGTNVGSGNVGGTN--- 237 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNN 270 +GSGN G+ N GSGN G N GSGN G+ N G GN G N Sbjct 238 --------------LGSGNYGSLNWGSGNTGTG------NAGSGNTGDYNPGSGNFGSGN 277 Query 271 FGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGD 330 FG GN G+ N+G GN G N+ GN G+ NFGGGNTG+ N G GN G Sbjct 278 FGSGNIGSLNVGSGNFGTL------------NLANGNNGDVNFGGGNTGDFNFGGGNNGT 325 Query 331 GNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNS 390 N GFGN+GS NFGFGNTGNNNIGIGLTG QIG GGLNSG+GNIGFGNSG NIGFFNS Sbjct 326 LNFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNS 385 Query 391 GSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNA 450 G GN G NSG+ NTGFGN+G INTGF NA ++NTGFG++G N GI + Sbjct 386 GDGNIGF----------FNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDG 435 Query 451 GDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNA 510 G+ N+G+FN G NTG NSGA N+G FN GD+N+GF N+G NTGF N G+INTGGFN Sbjct 436 GNSNSGSFNVGFQNTGFGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNG 495 Query 511 GNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTG 570 GN+NTGFG+ G NSGFGN G+GNSG+ GNS GN SGF N+G Sbjct 496 GNVNTGFGSALTQAGANSGFGNLGTGNSGW-----GNSDPSGTGN---SGFFNTGNG--- 544 Query 571 YNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFG----NLEANPDNNSATSGFGNSG 626 SGF N G + GF SGF N G +G NL ++ +SG NSG Sbjct 545 -------NSGFSNAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSG 597 Query 627 KQDSGGFNSIDFVSGFFH 644 Q+SG FN+ +SGFF Sbjct 598 SQNSGAFNAGVGLSGFFR 615 >gi|253798566|ref|YP_003031567.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|313659284|ref|ZP_07816164.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] gi|253320069|gb|ACT24672.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] Length=615 Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 356/678 (53%), Positives = 412/678 (61%), Gaps = 97/678 (14%) Query 1 MVGFAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQG 60 MV F+ LPPE NS RM+ GAGS P+LAAA AWDGLA EL AA SFG VTS LAGG+ Q Sbjct 1 MVNFSVLPPEINSGRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQA 60 Query 61 PASAAMANAAG---PYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVR 117 AA A PYA WL AA A+A AA QA+A AGAFE A A +V P VV ANR Sbjct 61 WQGAAAAAMVVAAAPYAGWLAAAAARAGGAAVQAKAVAGAFEAARAAMVDPVVVAANRSA 120 Query 118 TWLLAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALP--- 174 L +SNVFGQNAPAIAA E+TYEQMWA DVA M GYH +SAAAA LA WQ A+P Sbjct 121 FVQLVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALAPWQQAVPGLS 180 Query 175 ------------------------NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGG 210 +NLGVGNIG+LN+G+GN G N+G+GN+G N Sbjct 181 GLLGGAANAPAAAAQGAAQGLAELTLNLGVGNIGSLNLGSGNIGGTNVGSGNVGGTN--- 237 Query 211 GNGSAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNN 270 +GSGN G+ N GSGN G N GSGN G+ N G GN G N Sbjct 238 --------------LGSGNYGSLNWGSGNTGTG------NAGSGNTGDYNPGSGNFGSGN 277 Query 271 FGFGNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGD 330 FG GN G+ N+G GN G N+ GN G+ NFGGGNTG+ N G GN G Sbjct 278 FGSGNIGSLNVGSGNFGTL------------NLANGNNGDVNFGGGNTGDFNFGGGNNGT 325 Query 331 GNVGFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNS 390 N GFGN+GS NFGFGNTGNNNIGIGLTG QIG GGLNSG+ NIGFGNSG NIGFFNS Sbjct 326 LNFGFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGNNNIGFGNSGNNNIGFFNS 385 Query 391 GSGNFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNA 450 G GN G NSG+ NTGFGN+G INTGF NA ++NTGFG++G N GI + Sbjct 386 GDGNIGF----------FNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDG 435 Query 451 GDFNTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNA 510 G+ N+G+FN G NTG NSGA N+G FN GD+N+GF N+G NTGF N G+INTGGFN Sbjct 436 GNSNSGSFNVGFQNTGFGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNG 495 Query 511 GNLNTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTG 570 GN+NTGFG+ G NSGFGN G+GNSG+ GNS GN SGF N+G Sbjct 496 GNVNTGFGSALTQAGANSGFGNLGTGNSGW-----GNSDPSGTGN---SGFFNTGNG--- 544 Query 571 YNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFG----NLEANPDNNSATSGFGNSG 626 SGF N G + GF SGF N G +G NL ++ +SG NSG Sbjct 545 -------NSGFSNAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSG 597 Query 627 KQDSGGFNSIDFVSGFFH 644 Q+SG FN+ +SGFF Sbjct 598 SQNSGAFNAGVGLSGFFR 615 >gi|254365133|ref|ZP_04981179.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|297731949|ref|ZP_06961067.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|134150647|gb|EBA42692.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=614 Score = 367 bits (942), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 355/675 (53%), Positives = 411/675 (61%), Gaps = 97/675 (14%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F+ LPPE NS RM+ GAGS P+LAAA AWDGLA EL AA SFG VTS LAGG+ Q Sbjct 3 FSVLPPEINSGRMFFGAGSGPMLAAAAAWDGLAAELGLAAESFGLVTSGLAGGSGQAWQG 62 Query 64 AAMANAAG---PYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWL 120 AA A PYA WL AA A+A AA QA+A AGAFE A A +V P VV ANR Sbjct 63 AAAAAMVVAAAPYAGWLAAAAARAGGAAVQAKAVAGAFEAARAAMVDPVVVAANRSAFVQ 122 Query 121 LAVSNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALP------ 174 L +SNVFGQNAPAIAA E+TYEQMWA DVA M GYH +SAAAA LA WQ A+P Sbjct 123 LVLSNVFGQNAPAIAAAEATYEQMWAADVAAMVGYHGGASAAAAALAPWQQAVPGLSGLL 182 Query 175 ---------------------NINLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNG 213 +NLGVGNIG+LN+G+GN G N+G+GN+G N Sbjct 183 GGAANAPAAAAQGAAQGLAELTLNLGVGNIGSLNLGSGNIGGTNVGSGNVGGTN------ 236 Query 214 SAFHGQISSFNVGSGNIGNFNLGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGF 273 +GSGN G+ N GSGN G N GSGN G+ N G GN G NFG Sbjct 237 -----------LGSGNYGSLNWGSGNTGTG------NAGSGNTGDYNPGSGNFGSGNFGS 279 Query 274 GNFGNANIGIGNAGPNMSSPAVPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNV 333 GN G+ N+G GN G N+ GN G+ NFGGGNTG+ N G GN G N Sbjct 280 GNIGSLNVGSGNFGTL------------NLANGNNGDVNFGGGNTGDFNFGGGNNGTLNF 327 Query 334 GFGNSGSYNFGFGNTGNNNIGIGLTGSNQIGFGGLNSGSGNIGFGNSGTGNIGFFNSGSG 393 GFGN+GS NFGFGNTGNNNIGIGLTG QIG GGLNSG+GNIGFGNSG NIGFFNSG G Sbjct 328 GFGNTGSGNFGFGNTGNNNIGIGLTGDGQIGIGGLNSGTGNIGFGNSGNNNIGFFNSGDG 387 Query 394 NFGVGNSGVTNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDF 453 N G NSG+ NTGFGN+G INTGF NA ++NTGFG++G N GI + G+ Sbjct 388 NIGF----------FNSGDGNTGFGNAGNINTGFWNAGNLNTGFGSAGNGNVGIFDGGNS 437 Query 454 NTGNFNGGIINTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNL 513 N+G+FN G NTG NSGA N+G FN GD+N+GF N+G NTGF N G+INTGGFN GN+ Sbjct 438 NSGSFNVGFQNTGFGNSGAGNTGFFNAGDSNTGFANAGNVNTGFFNGGDINTGGFNGGNV 497 Query 514 NTGFGNTTDGLGENSGFGNAGSGNSGFNNSGRGNSGAQNVGNLQISGFANSGQSVTGYNN 573 NTGFG+ G NSGFGN G+GNSG+ GNS GN SGF N+G Sbjct 498 NTGFGSALTQAGANSGFGNLGTGNSGW-----GNSDPSGTGN---SGFFNTGNG------ 543 Query 574 SVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGFG----NLEANPDNNSATSGFGNSGKQD 629 SGF N G + GF SGF N G +G NL ++ +SG NSG Q+ Sbjct 544 ----NSGFSNAGPAMLPGFNSGFANIGSFNAGIANSGNNLAGISNSGDDSSGAVNSGSQN 599 Query 630 SGGFNSIDFVSGFFH 644 SG FN+ +SGFF Sbjct 600 SGAFNAGVGLSGFFR 614 >gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacterium marinum M] gi|183174486|gb|ACC39596.1| PPE family protein [Mycobacterium marinum M] Length=608 Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 327/646 (51%), Positives = 383/646 (60%), Gaps = 85/646 (13%) Query 4 FAWLPPETNSLRMYLGAGSRPLLAAAGAWDGLAEELHAAASSFGSVTSELAGGAWQGPAS 63 F LPPE NS RM+ GAGS P+L+AA AWDGLA EL +AA SFGSVTS L G +WQG A+ Sbjct 3 FPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLVGSSWQGAAA 62 Query 64 AAMANAAGPYASWLTAAGAQAELAARQARAAAGAFEEALAGVVHPAVVQANRVRTWLLAV 123 AAM+ AA PY SWL AA +A AA QA+ AFE A A ++HP V ANR L + Sbjct 63 AAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNALVQLVL 122 Query 124 SNVFGQNAPAIAAMESTYEQMWAQDVAVMAGYHAASSAAAAQLASWQPALPNI------- 176 +N+FGQNAPAIAA E +YEQMWA DVA M GYH +SAAA+ LASWQ AL + Sbjct 123 TNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAGPAASV 182 Query 177 --NLGVGNIGNLNVGNGNTGDYNLGNGNLGNANFGGGNGSAFHGQISSFNVGSGNIGNFN 234 L +GNIG N+ GN GD+NLG GN GN N GGGN GN N Sbjct 183 IPGLSIGNIGVGNLSIGNIGDFNLGGGNAGNLNLGGGN-----------------TGNAN 225 Query 235 LGSGNGNVGIGPSSFNVGSGNIGNANVGGGNSGDNNFGFGNFGNANIGIGNAGPNMSSPA 294 LGSGN FN+GSGN GN N G GN G+ N+G GN GNAN+G GN + Sbjct 226 LGSGNNGF------FNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGF 279 Query 295 VPTPGNGNVGIGNGGNGNFGGGNTGNANIGLGNVGDGNVGFGNSGSYNFGFGNTGNNNIG 354 G+ N+G GN GN NFG GN G+ N+G GN G NVGFGN GS N GFGN G+NNIG Sbjct 280 GNRVGDANLGSGNLGNANFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIG 339 Query 355 IGLTGSNQIGF------------GGLNSGSGNIGFGNSGTGNIGFFNSGSGNFGVGNSGV 402 GLTG+NQ+G G NSG N+GF NSG+ N+GFFNSG GNFG Sbjct 340 FGLTGNNQVGINFAGLNGGIGNIGLGNSGDNNVGFFNSGSNNVGFFNSGDGNFGF----- 394 Query 403 TNTGVANSGNINTGFGNSGFINTGFGNALSVNTGFGNSGQANTGIGNAGDFNTGNFNGGI 462 AN+G+ NTGF N+G +NTGFGN + N GFGN G AN G+GN G N G N G Sbjct 395 -----ANAGDTNTGFWNAGRVNTGFGNGGNFNLGFGNGGAANVGVGNGGGGNMGFGNSGT 449 Query 463 INTGSFNSGAFNSGSFNGGDANSGFLNSGLTNTGFANSGNINTGGFNAGNLNTGFGNTTD 522 NTGSFNSG N + + NSG NTGF NSG+ NTG FNAG++NTG G+ Sbjct 450 ENTGSFNSGGDNGPNGGNTGS----FNSGYVNTGFFNSGSTNTGLFNAGSVNTGIGSPDT 505 Query 523 GLGENSGFGNAGSGNSGFNNSGRGNSG-------------AQNVGNLQI---------SG 560 G SGFGN G+G SGFNNSG SG NVG+ Q+ +G Sbjct 506 QPGSISGFGNTGAGVSGFNNSGDATSGFMNVATTFGFTSGINNVGDYQVGLFNTGFGNAG 565 Query 561 FANSGQSVTGYNNSVSVTSGFGNKGTGLFSGFMSGFGNTGFLQSGF 606 ANSG + G NS +++SG N GT GF NTG QSGF Sbjct 566 IANSGNATFGIANSGALSSGISNSGTNSSGGF-----NTGDDQSGF 606 Lambda K H 0.310 0.133 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1495178131040 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40