BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0758 Length=485 Score E Sequences producing significant alignments: (Bits) Value gi|15607898|ref|NP_215272.1| two component system response senso... 956 0.0 gi|15840173|ref|NP_335210.1| sensor histidine kinase [Mycobacter... 952 0.0 gi|306802383|ref|ZP_07439051.1| two component system sensor kina... 951 0.0 gi|306966787|ref|ZP_07479448.1| two component system sensor kina... 951 0.0 gi|289760885|ref|ZP_06520263.1| two component system response se... 950 0.0 gi|31791946|ref|NP_854439.1| two component system response senso... 950 0.0 gi|289744483|ref|ZP_06503861.1| two component system response se... 949 0.0 gi|341600698|emb|CCC63368.1| possible two component system respo... 947 0.0 gi|339630828|ref|YP_004722470.1| two component system response s... 944 0.0 gi|340625777|ref|YP_004744229.1| putative two component system r... 942 0.0 gi|240171668|ref|ZP_04750327.1| PhoR [Mycobacterium kansasii ATC... 694 0.0 gi|183984909|ref|YP_001853200.1| two-component system response p... 670 0.0 gi|118616307|ref|YP_904639.1| two component system response phos... 667 0.0 gi|296166497|ref|ZP_06848928.1| phosphate regulon sensor histidi... 664 0.0 gi|41406690|ref|NP_959526.1| PhoR [Mycobacterium avium subsp. pa... 659 0.0 gi|118464141|ref|YP_879978.1| sensor histidine kinase [Mycobacte... 657 0.0 gi|254818465|ref|ZP_05223466.1| PhoR [Mycobacterium intracellula... 654 0.0 gi|254773641|ref|ZP_05215157.1| PhoR [Mycobacterium avium subsp.... 652 0.0 gi|342862202|ref|ZP_08718844.1| sensor histidine kinase [Mycobac... 649 0.0 gi|120406122|ref|YP_955951.1| integral membrane sensor signal tr... 614 1e-173 gi|145222174|ref|YP_001132852.1| integral membrane sensor signal... 612 4e-173 gi|315442612|ref|YP_004075491.1| signal transduction histidine k... 609 3e-172 gi|126437537|ref|YP_001073228.1| integral membrane sensor signal... 596 3e-168 gi|108801552|ref|YP_641749.1| periplasmic sensor signal transduc... 595 4e-168 gi|333992253|ref|YP_004524867.1| two-component system response p... 577 1e-162 gi|118468443|ref|YP_890098.1| sensor histidine kinase PhoR [Myco... 556 4e-156 gi|169627777|ref|YP_001701426.1| putative sensor histidine kinas... 516 3e-144 gi|226364244|ref|YP_002782026.1| two-component histidine kinase ... 492 7e-137 gi|111021713|ref|YP_704685.1| sensor kinase, two-component syste... 488 1e-135 gi|226304477|ref|YP_002764435.1| two-component histidine kinase ... 464 1e-128 gi|229494556|ref|ZP_04388319.1| sensor kinase, two-component sys... 458 9e-127 gi|312138243|ref|YP_004005579.1| two component system sensor kin... 449 7e-124 gi|325674849|ref|ZP_08154536.1| phosphate regulon sensor histidi... 447 1e-123 gi|324106155|gb|ADY18321.1| hypothetical protein [Rhodococcus rh... 410 4e-112 gi|294996235|ref|ZP_06801926.1| two component system sensor kina... 409 7e-112 gi|319951281|ref|ZP_08025116.1| two-component histidine kinase P... 405 1e-110 gi|294993217|ref|ZP_06798908.1| two component system sensor kina... 402 5e-110 gi|317509452|ref|ZP_07967070.1| hsp90-like protein [Segniliparus... 399 7e-109 gi|296392537|ref|YP_003657421.1| integral membrane sensor signal... 388 1e-105 gi|336324699|ref|YP_004604665.1| two-component system sensor his... 372 9e-101 gi|172041314|ref|YP_001801028.1| two-component system sensor kin... 371 2e-100 gi|334564078|ref|ZP_08517069.1| two-component system sensor kina... 365 8e-99 gi|54022512|ref|YP_116754.1| putative two-component system senso... 364 2e-98 gi|284993023|ref|YP_003411577.1| integral membrane sensor signal... 358 2e-96 gi|260578370|ref|ZP_05846284.1| sensor histidine kinase [Coryneb... 354 2e-95 gi|343925789|ref|ZP_08765304.1| two-component histidine kinase P... 353 3e-95 gi|227506356|ref|ZP_03936405.1| sensor kinase [Corynebacterium s... 353 5e-95 gi|284031361|ref|YP_003381292.1| histidine kinase [Kribbella fla... 350 4e-94 gi|68535407|ref|YP_250112.1| two-component system sensor kinase ... 349 5e-94 gi|296141304|ref|YP_003648547.1| integral membrane sensor signal... 349 5e-94 >gi|15607898|ref|NP_215272.1| two component system response sensor kinase membrane associated PHOR [Mycobacterium tuberculosis H37Rv] gi|148660535|ref|YP_001282058.1| putative two component system response sensor kinase membrane associated PhoR [Mycobacterium tuberculosis H37Ra] gi|307083273|ref|ZP_07492386.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu012] gi|1550636|emb|CAB02401.1| POSSIBLE TWO COMPONENT SYSTEM RESPONSE SENSOR KINASE MEMBRANE ASSOCIATED PHOR [Mycobacterium tuberculosis H37Rv] gi|148504687|gb|ABQ72496.1| putative two component system response sensor kinase membrane associated PhoR [Mycobacterium tuberculosis H37Ra] gi|308367021|gb|EFP55872.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu012] Length=485 Score = 956 bits (2471), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/485 (100%), Positives = 485/485 (100%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|15840173|ref|NP_335210.1| sensor histidine kinase [Mycobacterium tuberculosis CDC1551] gi|148821964|ref|YP_001286718.1| two component system response sensor kinase membrane associated phoR [Mycobacterium tuberculosis F11] gi|253797704|ref|YP_003030705.1| two component system sensor kinase phoR [Mycobacterium tuberculosis KZN 1435] 49 more sequence titles Length=485 Score = 952 bits (2462), Expect = 0.0, Method: Compositional matrix adjust. Identities = 484/485 (99%), Positives = 484/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|306802383|ref|ZP_07439051.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu008] gi|308350846|gb|EFP39697.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu008] Length=485 Score = 951 bits (2459), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 483/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSL LNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLVLNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|306966787|ref|ZP_07479448.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu009] gi|308355484|gb|EFP44335.1| two component system sensor kinase phoR [Mycobacterium tuberculosis SUMu009] Length=485 Score = 951 bits (2458), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 483/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQT AAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTTAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|289760885|ref|ZP_06520263.1| two component system response sensor kinase membrane associated phoR [Mycobacterium tuberculosis GM 1503] gi|289708391|gb|EFD72407.1| two component system response sensor kinase membrane associated phoR [Mycobacterium tuberculosis GM 1503] Length=485 Score = 950 bits (2456), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 483/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDD ILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDGILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|31791946|ref|NP_854439.1| two component system response sensor kinase membrane associated PHOR [Mycobacterium bovis AF2122/97] gi|121636682|ref|YP_976905.1| putative two component system response sensor kinase membrane associated phoR [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989154|ref|YP_002643841.1| putative two component system response sensor kinase membrane associated [Mycobacterium bovis BCG str. Tokyo 172] 7 more sequence titles Length=485 Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 483/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYP HNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPIHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|289744483|ref|ZP_06503861.1| two component system response sensor kinase membrane associated phoR [Mycobacterium tuberculosis 02_1987] gi|289685011|gb|EFD52499.1| two component system response sensor kinase membrane associated phoR [Mycobacterium tuberculosis 02_1987] Length=485 Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/485 (99%), Positives = 483/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRA ASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRAHASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|341600698|emb|CCC63368.1| possible two component system response sensor kinase membrane associated phoR [Mycobacterium bovis BCG str. Moreau RDJ] Length=485 Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/485 (99%), Positives = 482/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYP HNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPIHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRV LLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVGLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|339630828|ref|YP_004722470.1| two component system response sensor kinase membrane associated PHOR [Mycobacterium africanum GM041182] gi|339330184|emb|CCC25842.1| putative two component system response sensor kinase membrane associated PHOR [Mycobacterium africanum GM041182] Length=485 Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust. Identities = 482/485 (99%), Positives = 482/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYP HNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPIHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGC FRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCRFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|340625777|ref|YP_004744229.1| putative two component system response sensor kinase membrane associated PHOR [Mycobacterium canettii CIPT 140010059] gi|340003967|emb|CCC43102.1| putative two component system response sensor kinase membrane associated PHOR [Mycobacterium canettii CIPT 140010059] Length=485 Score = 942 bits (2434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/485 (99%), Positives = 481/485 (99%), Gaps = 0/485 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI Sbjct 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS Sbjct 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVV Sbjct 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA Sbjct 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIE EASRMGLL Sbjct 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIEGEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLDAHRPLEL RVDLLALASDAAHDA AMDPKRRITLEVLDGPGTPEVLGDE Sbjct 301 VDDLLLLARLDAHRPLELRRVDLLALASDAAHDALAMDPKRRITLEVLDGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR Sbjct 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV Sbjct 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSLTPV 480 Query 481 VPGPP 485 VPGPP Sbjct 481 VPGPP 485 >gi|240171668|ref|ZP_04750327.1| PhoR [Mycobacterium kansasii ATCC 12478] Length=477 Score = 694 bits (1792), Expect = 0.0, Method: Compositional matrix adjust. Identities = 360/472 (77%), Positives = 404/472 (86%), Gaps = 0/472 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MA H R +PLRV LVAATL+LV GL+ASG+AVTS+L+H L SRID LL+ ++ WAQ Sbjct 1 MATHRRRGIPLRVSLVAATLVLVLCGLLASGVAVTSILRHSLISRIDSTLLDASRTWAQS 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 + G +P RPPS+FYVR ISPDG + TA+ND A PA+P +NDVG PTTL S Sbjct 61 PWKHSMSNGEGPDPARPPSKFYVRGISPDGHTVTAINDRNAEPALPPSNDVGPDPTTLHS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 + GS WRAVSV + G LTTVAIDL+DV+ TVRSLV LQ+GIG+AVLVV G+AGYAVV Sbjct 121 VNGSDIEWRAVSVHGTHGGLTTVAIDLSDVQHTVRSLVWLQIGIGAAVLVVVGIAGYAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RRSLRPLAE EQTAAAI +GQLDRRVP+ PRTEVGRLSLALNGML+QIQ+AVA +ESSA Sbjct 181 RRSLRPLAEVEQTAAAIASGQLDRRVPERDPRTEVGRLSLALNGMLSQIQQAVADSESSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKAR SEDRMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLL Sbjct 241 EKARGSEDRMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLL+LARLD RPLE +VDLLALASDA HDA+A+DP+R ITLE L+GPGTPEVLGD+ Sbjct 301 VDDLLMLARLDVQRPLEHHQVDLLALASDAVHDAQAIDPERTITLEFLEGPGTPEVLGDD 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 +RLRQVL NLVANA+QHTP SAD+TVRVGTEGDDA+LEVAD GPGMSQEDA RVFERFYR Sbjct 361 ARLRQVLSNLVANALQHTPASADITVRVGTEGDDAVLEVADRGPGMSQEDASRVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 DSSRARASGGTGLGLSIVDSLV AHGGAV++ TA GEGCCFRV+LPRVS+V Sbjct 421 TDSSRARASGGTGLGLSIVDSLVRAHGGAVSLATAPGEGCCFRVTLPRVSEV 472 >gi|183984909|ref|YP_001853200.1| two-component system response phosphate sensor kinase, PhoR [Mycobacterium marinum M] gi|183178235|gb|ACC43345.1| two-component system response phosphate sensor kinase, PhoR [Mycobacterium marinum M] Length=481 Score = 670 bits (1728), Expect = 0.0, Method: Compositional matrix adjust. Identities = 348/471 (74%), Positives = 394/471 (84%), Gaps = 0/471 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MA L +PLRV LVAATL LV GL+ASG+AVTS+L+H L SRID LLE ++ WAQ Sbjct 1 MAERLPRAVPLRVGLVAATLALVLCGLLASGVAVTSILRHSLVSRIDSTLLEASRTWAQA 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 + + G +P RPPS+FYVR ISPDG++ TA+ND A PA+PA+NDVG PTTLPS Sbjct 61 SWRHSMPSVEGPDPARPPSKFYVRSISPDGRAMTAINDRNAEPALPADNDVGSDPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 + GS WRAVSV G LTTVAIDL+DV+ TVRSLV LQ+GIG+ VLVV G+AG+AVV Sbjct 121 VNGSNIEWRAVSVHGPQGGLTTVAIDLSDVQHTVRSLVWLQIGIGAGVLVVVGLAGFAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 +RSLRPL+E EQTAAAI +GQLDRRVP+ PRTEVG+LSLA+NGML+QIQ A+A++E SA Sbjct 181 QRSLRPLSEVEQTAAAIASGQLDRRVPERDPRTEVGQLSLAMNGMLSQIQVALAASEDSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKAR SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLL Sbjct 241 EKARSSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLL LARLD RPLE RVDLL LA+DA HDARA+D KR IT+EVL+GPGTPEVLGDE Sbjct 301 VDDLLTLARLDVQRPLERNRVDLLVLAADAVHDARAIDRKRAITVEVLEGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 RLRQVL NLV NA+QHTP+SADVTVRVGT G +A+LEVAD GPGM EDA RVFERFYR Sbjct 361 PRLRQVLSNLVGNALQHTPDSADVTVRVGTAGQNAVLEVADKGPGMPAEDAARVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 DSSRARASGGTGLGLSIV SLV AHGG VT+TTA GEGCCFRV+LPRVS+ Sbjct 421 TDSSRARASGGTGLGLSIVHSLVKAHGGDVTLTTAPGEGCCFRVTLPRVSE 471 >gi|118616307|ref|YP_904639.1| two component system response phosphate sensor kinase, PhoR [Mycobacterium ulcerans Agy99] gi|118568417|gb|ABL03168.1| two component system response phosphate sensor kinase, PhoR [Mycobacterium ulcerans Agy99] Length=481 Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/471 (74%), Positives = 394/471 (84%), Gaps = 0/471 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MA L + LRV LVAATL LV GL+ASG+AVTS+L+H L SRID LLE ++ WAQ Sbjct 1 MAERLPRAVQLRVGLVAATLALVLCGLLASGVAVTSILRHSLVSRIDSTLLEASRTWAQA 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 + + G +P RPPS+FYVR ISPDG++ TA+ND A PA+PA+NDVG PTTLPS Sbjct 61 SWRHSMPSVEGPDPARPPSKFYVRSISPDGRAMTAINDRNAEPALPADNDVGSDPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 + GS WRAVSV G LTTVAIDL+DV+ TVRSLV LQ+GIG+ VLVV G+AG+AVV Sbjct 121 VNGSNIEWRAVSVHGPQGGLTTVAIDLSDVQHTVRSLVWLQIGIGAGVLVVVGLAGFAVV 180 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 +RSLRPL+E EQTAAAI +GQLDRRVP+ PRTEVG+LSLA+NGML+QIQ A+A++E SA Sbjct 181 QRSLRPLSEVEQTAAAIASGQLDRRVPERDPRTEVGQLSLAMNGMLSQIQVALAASEDSA 240 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKAR SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLL Sbjct 241 EKARSSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLL 300 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLL LARLD RPLE RVDLL LA+DA HDARA+D KR IT+EVL+GPGTPEVLGDE Sbjct 301 VDDLLTLARLDVQRPLERNRVDLLVLAADAVHDARAIDRKRAITVEVLEGPGTPEVLGDE 360 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 RLRQVL NLV NA+QHTP+SADVTVRVGT G++A+LEVAD GPGM EDA RVFERFYR Sbjct 361 PRLRQVLSNLVGNALQHTPDSADVTVRVGTAGENAVLEVADKGPGMPAEDAARVFERFYR 420 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 DSSRARASGGTGLGLSIV SLV AHGG VT+TTA GEGCCFRV+LPRVS+ Sbjct 421 TDSSRARASGGTGLGLSIVHSLVKAHGGDVTLTTAPGEGCCFRVTLPRVSE 471 >gi|296166497|ref|ZP_06848928.1| phosphate regulon sensor histidine kinase protein PhoR [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898109|gb|EFG77684.1| phosphate regulon sensor histidine kinase protein PhoR [Mycobacterium parascrofulaceum ATCC BAA-614] Length=480 Score = 664 bits (1714), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/472 (77%), Positives = 404/472 (86%), Gaps = 1/472 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 MA+ R LPLRV LVAATL+LVA GL SG+AVTS+L+H L SRID+ LL+ ++ WAQ Sbjct 1 MAKQHRRGLPLRVGLVAATLVLVACGLAVSGVAVTSILRHSLVSRIDQTLLDASRGWAQN 60 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 +P PY G +P RPPS+FYVR + +G +TA+ND + PA+P NNDVG +PTTLPS Sbjct 61 PRRQSPPPYEGPDPGRPPSKFYVRGVGTNGTPFTAINDRNSEPALPPNNDVGPNPTTLPS 120 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 + GS WRAVSVR G LTTVAIDL+DV+ TV +LV LQ+GIG AVLVV G+AG+AVV Sbjct 121 VNGSDIQWRAVSVRGPHG-LTTVAIDLSDVQHTVSALVWLQIGIGVAVLVVVGIAGFAVV 179 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 +RSLRPL+E EQTAAAI +GQLDRRVP+ PRTEVGRLSLALNGMLAQIQ A+AS+ESSA Sbjct 180 QRSLRPLSEVEQTAAAIASGQLDRRVPERDPRTEVGRLSLALNGMLAQIQEALASSESSA 239 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 EKAR SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMG+L Sbjct 240 EKARGSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGML 299 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 VDDLLLLARLD RPLE RVDLLALASDA HDA+AMDP R ITLEVLDGPG PEVLGDE Sbjct 300 VDDLLLLARLDVQRPLEHNRVDLLALASDAVHDAQAMDPGRTITLEVLDGPGIPEVLGDE 359 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 R+RQVL NLVANA+QHTPE+ADVTVRVGTEGDDA+LEVAD GPGM+++DA RVFERFYR Sbjct 360 PRIRQVLSNLVANALQHTPEAADVTVRVGTEGDDAVLEVADKGPGMTEQDASRVFERFYR 419 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 DSSRARASGGTGLGLSIVDSLV AHGGAVTVTTA GEGC FRV+LPRVS+V Sbjct 420 TDSSRARASGGTGLGLSIVDSLVRAHGGAVTVTTAPGEGCRFRVTLPRVSEV 471 >gi|41406690|ref|NP_959526.1| PhoR [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395040|gb|AAS02909.1| PhoR [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458354|gb|EGO37332.1| signal transduction histidine kinase [Mycobacterium avium subsp. paratuberculosis S397] Length=478 Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/464 (78%), Positives = 396/464 (86%), Gaps = 1/464 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 LPLRV LVAATL LVA GL SGIAVTS+L+H L SRID LL+ ++ WAQ + Sbjct 10 LPLRVGLVAATLALVACGLAVSGIAVTSILRHSLVSRIDSTLLDASRGWAQAPRRQSSSA 69 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 Y G +P RPPS+FYVR +S DG +TA+ND A PA+PANNDVG +PTTLPS+ GS W Sbjct 70 YEGPDPGRPPSKFYVRGVSTDGTPFTAINDRNAEPALPANNDVGPNPTTLPSVNGSDIQW 129 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 RAVSVR G LTTVAIDL+DV+ TV SLV LQ+GIG AVL V G+A +AVV+RSLRPL Sbjct 130 RAVSVRGPHG-LTTVAIDLSDVQHTVSSLVWLQIGIGVAVLAVVGIASFAVVQRSLRPLV 188 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E EQTAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ+A+AS+ESSAEKAR SED Sbjct 189 EVEQTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQQALASSESSAEKARGSED 248 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLLVDDLLLLA Sbjct 249 RMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLLVDDLLLLA 308 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLD RPLE RVDLLALASDA HDA+AMDPKR ITLEVLDGPGTPEV GDE R+RQVL Sbjct 309 RLDVQRPLEHHRVDLLALASDAVHDAQAMDPKRTITLEVLDGPGTPEVFGDEPRIRQVLG 368 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NL+ANA+QHTPESADVTVRVGT+GDDA+LEVAD GPGM+++DA RVFERFYR DSSRARA Sbjct 369 NLIANALQHTPESADVTVRVGTDGDDAVLEVADRGPGMNEQDASRVFERFYRTDSSRARA 428 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 SGGTGLGLSIV+SLV AHGG V VTTA G+GCCFRV+LPR+SDV Sbjct 429 SGGTGLGLSIVESLVRAHGGTVGVTTAPGQGCCFRVTLPRISDV 472 >gi|118464141|ref|YP_879978.1| sensor histidine kinase [Mycobacterium avium 104] gi|118165428|gb|ABK66325.1| sensor histidine kinase PhoR [Mycobacterium avium 104] Length=478 Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust. Identities = 357/464 (77%), Positives = 396/464 (86%), Gaps = 1/464 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 LPLRV LVAATL LVA GL SGIAVTS+L+H L SRID LL+ ++ WAQ + Sbjct 10 LPLRVGLVAATLALVACGLAVSGIAVTSILRHSLVSRIDSTLLDASRGWAQAPRRQSSSA 69 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 Y G +P RPPS+FYVR +S DG +TA+ND A PA+PA+NDVG +PTTLPS+ GS W Sbjct 70 YEGPDPGRPPSKFYVRGVSTDGTPFTAINDRNAEPALPADNDVGPNPTTLPSVNGSDIQW 129 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 RAVSVR G LTTVAIDL+DV+ TV SLV LQ+GIG AVL V G+A +AVV+RSLRPL Sbjct 130 RAVSVRGPHG-LTTVAIDLSDVQHTVSSLVWLQIGIGVAVLAVVGIASFAVVQRSLRPLV 188 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E EQTAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ+A+AS+ESSAEKAR SED Sbjct 189 EVEQTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQQALASSESSAEKARGSED 248 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLLVDDLLLLA Sbjct 249 RMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLLVDDLLLLA 308 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLD RPLE RVDLLALASDA HDA+AMDPKR ITLEVLDGPGTPEV GDE R+RQVL Sbjct 309 RLDVQRPLEHHRVDLLALASDAVHDAQAMDPKRTITLEVLDGPGTPEVFGDEPRIRQVLG 368 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NL+ANA+QHTPESADVTVRVGT+GDDA+LEVAD GPGM+++DA RVFERFYR DSSRARA Sbjct 369 NLIANALQHTPESADVTVRVGTDGDDAVLEVADRGPGMNEQDASRVFERFYRTDSSRARA 428 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 SGGTGLGLSIV+SLV AHGG V VTTA G+GCCFRV+LPR+SDV Sbjct 429 SGGTGLGLSIVESLVRAHGGTVGVTTAPGQGCCFRVTLPRISDV 472 >gi|254818465|ref|ZP_05223466.1| PhoR [Mycobacterium intracellulare ATCC 13950] Length=472 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 349/464 (76%), Positives = 399/464 (86%), Gaps = 1/464 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR+ LVAATL+LVA GL SG+AVTS+L+H SRID+ LL+ + WA +P P Sbjct 1 MPLRIGLVAATLLLVACGLAVSGVAVTSILRHSQISRIDQTLLDASHSWALAPRRQSPPP 60 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 Y G +P RPPS+FYVR + DG +TA+ND A PA+PANNDVG +PTTLPS+ GS W Sbjct 61 YEGPDPGRPPSKFYVRGVGTDGVPFTAINDRNAEPALPANNDVGPNPTTLPSVNGSNIHW 120 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 RAVSVR G LTTVAIDL+D++ T+RSLV LQ+ IG VLV+ G+A +AVV+RSLRPLA Sbjct 121 RAVSVRGPQG-LTTVAIDLSDLQHTLRSLVWLQIAIGVGVLVLVGIASFAVVQRSLRPLA 179 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E E+TAAAI +GQLDRRVP+ PRTEVGRLSLALNGMLAQIQ+A+AS+ESSAEKAR SED Sbjct 180 EVERTAAAIASGQLDRRVPERDPRTEVGRLSLALNGMLAQIQQALASSESSAEKARGSED 239 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLLVDDLLLLA Sbjct 240 RMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLLVDDLLLLA 299 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLD RPLE RVDLLALASDA HDA+A+DP R IT++VLDGPGTPEVLGDE+R+RQVL Sbjct 300 RLDVQRPLEHNRVDLLALASDAVHDAQAIDPGRTITMKVLDGPGTPEVLGDEARIRQVLS 359 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NL+ANA+QHTPESADVTVRVGT+GDDA+LEVAD GPGMS++DA RVFERFYR DSSRARA Sbjct 360 NLIANALQHTPESADVTVRVGTDGDDAVLEVADKGPGMSEQDASRVFERFYRTDSSRARA 419 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 SGGTGLGLSIV+SLV AHGG V+VTTA GEGCCFRV+LPR+SDV Sbjct 420 SGGTGLGLSIVESLVRAHGGVVSVTTAPGEGCCFRVTLPRISDV 463 >gi|254773641|ref|ZP_05215157.1| PhoR [Mycobacterium avium subsp. avium ATCC 25291] Length=465 Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/458 (78%), Positives = 391/458 (86%), Gaps = 1/458 (0%) Query 15 LVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNP 74 LVAATL LVA GL SGIAVTS+L+H L SRID LL+ ++ WAQ + Y G +P Sbjct 3 LVAATLALVACGLAVSGIAVTSILRHSLVSRIDSTLLDASRGWAQAPRRQSSSAYEGPDP 62 Query 75 DRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVR 134 RPPS+FYVR +S DG +TA+ND A PA+PANNDVG +PTTLPS+ GS WRAVSVR Sbjct 63 GRPPSKFYVRGVSTDGTPFTAINDRNAEPALPANNDVGPNPTTLPSVNGSDIQWRAVSVR 122 Query 135 ASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTA 194 G LTTVAIDL+DV+ TV SLV LQ+GIG AVL V G+A +AVV+RSLRPL E EQTA Sbjct 123 GPHG-LTTVAIDLSDVQHTVSSLVWLQIGIGVAVLAVVGIASFAVVQRSLRPLVEVEQTA 181 Query 195 AAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFI 254 AAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ+A+AS+ESSAEKAR SEDRMR+FI Sbjct 182 AAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQQALASSESSAEKARGSEDRMRRFI 241 Query 255 TDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHR 314 TDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIESEASRMGLLVDDLLLLARLD R Sbjct 242 TDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIESEASRMGLLVDDLLLLARLDVQR 301 Query 315 PLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANA 374 PLE RVDLLALASDA HDA+AMDPKR ITLEVLDGPGTPEV GDE R+RQVL NL+ANA Sbjct 302 PLEHHRVDLLALASDAVHDAQAMDPKRTITLEVLDGPGTPEVFGDEPRIRQVLGNLIANA 361 Query 375 IQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGL 434 +QHTPESADVTVRVGT+GDDA+LEVAD GPGM+++DA RVFERFYR DSSRARASGGTGL Sbjct 362 LQHTPESADVTVRVGTDGDDAVLEVADRGPGMNEQDASRVFERFYRTDSSRARASGGTGL 421 Query 435 GLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 GLSIV+SLV AHGG V VTTA G+GCCFRV+LPR+SDV Sbjct 422 GLSIVESLVRAHGGTVGVTTAPGQGCCFRVTLPRISDV 459 >gi|342862202|ref|ZP_08718844.1| sensor histidine kinase [Mycobacterium colombiense CECT 3035] gi|342130280|gb|EGT83600.1| sensor histidine kinase [Mycobacterium colombiense CECT 3035] Length=472 Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 353/464 (77%), Positives = 397/464 (86%), Gaps = 1/464 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR+ LVAATL LVA GL SGIAVTS+L+H L SRID LL+ ++ WAQ +P P Sbjct 1 MPLRIGLVAATLALVACGLAVSGIAVTSILRHSLVSRIDSTLLDASRGWAQAPRRQSPPP 60 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 Y G +P RPPS+FYVR +S DG +TA+ND A PA+PA+NDVG +PTTLPS+ GS W Sbjct 61 YEGPDPGRPPSKFYVRGVSIDGTPFTAINDRNAEPALPADNDVGPNPTTLPSVNGSDIQW 120 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 RAVSV G LTTVAIDL+DV+ T+ LV LQVGIG AVL V G+A +AVV+RSLRPL Sbjct 121 RAVSVHGPHG-LTTVAIDLSDVQHTLSWLVWLQVGIGVAVLAVVGIASFAVVQRSLRPLV 179 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E E+TAAAI +GQLDRRVP+ PRTEVGRLS ALNGMLAQIQ+A+AS+ESSAEKAR SED Sbjct 180 EVERTAAAIASGQLDRRVPERDPRTEVGRLSQALNGMLAQIQQALASSESSAEKARSSED 239 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV MLLSRIE+EASRMGLLVDDLLLLA Sbjct 240 RMRRFITDASHELRTPLTTIRGFAELYRQGAARDVAMLLSRIENEASRMGLLVDDLLLLA 299 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLD RPLE RVDLLALASDA HDA+A+DP R IT+EVLDGPGTPEVLGDE+R+RQVL Sbjct 300 RLDVQRPLEHHRVDLLALASDAVHDAQAIDPGRTITMEVLDGPGTPEVLGDEARIRQVLS 359 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NLVANA+QHTPESADVTVRVGT+GDDA+LEVAD GPGM+QEDA RVFERFYR DSSRARA Sbjct 360 NLVANALQHTPESADVTVRVGTDGDDAVLEVADQGPGMNQEDASRVFERFYRTDSSRARA 419 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 SGGTGLGLSIV+SLV AHGGAV+VTTA GEGC FRV+LPR+SDV Sbjct 420 SGGTGLGLSIVESLVRAHGGAVSVTTAPGEGCRFRVTLPRISDV 463 >gi|120406122|ref|YP_955951.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119958940|gb|ABM15945.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length=503 Score = 614 bits (1583), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 332/467 (72%), Positives = 386/467 (83%), Gaps = 0/467 (0%) Query 5 LRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPL 64 +R +PLRV LVAA L+LVA GL+ASGIAVT+++QH L +R+D LL+ ++ WAQ+ + Sbjct 18 IRRGVPLRVGLVAAMLLLVACGLLASGIAVTTIMQHSLMNRVDDTLLDASRGWAQVPRRV 77 Query 65 APDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGS 124 P G NP RPPS FYVR + PDG + +ND A PA+P +NDVG P T+ S+ S Sbjct 78 LTVPMEGPNPARPPSDFYVRAVDPDGHVWMEVNDREAEPALPEDNDVGSEPVTVASVDHS 137 Query 125 KTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSL 184 WRA++VR G LTTVAIDL+DV+STVRSLV Q G G AVLVV G+AGYAVV RSL Sbjct 138 HVQWRAMTVRGLSGELTTVAIDLSDVKSTVRSLVYTQAGFGVAVLVVLGIAGYAVVHRSL 197 Query 185 RPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKAR 244 RPL+E EQTAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQRA+AS+E+SAE+AR Sbjct 198 RPLSEVEQTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQRAMASSEASAEQAR 257 Query 245 DSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDL 304 SEDRMR+FITDASHELRTPLTTIRGFAELYRQGAARDV ML+SRIESE+ RMGLLV+DL Sbjct 258 TSEDRMRRFITDASHELRTPLTTIRGFAELYRQGAARDVEMLMSRIESESRRMGLLVEDL 317 Query 305 LLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLR 364 LLLARLDA RPL+ RVDLL LA+DA HDA+++ PKR I +EV DGPGTPEVLGDE RLR Sbjct 318 LLLARLDAQRPLDRHRVDLLTLATDAVHDAQSIAPKRSIKMEVFDGPGTPEVLGDEPRLR 377 Query 365 QVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSS 424 QVL NLVANA+QHTPE+A VTVRVGT+G+DA++EV D+GPGM EDA RVFERFYR D+S Sbjct 378 QVLSNLVANALQHTPETAAVTVRVGTDGNDAVVEVCDEGPGMRPEDAQRVFERFYRTDTS 437 Query 425 RARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 RARASGGTGLGLSIVDSLV AHGG V+VTTA G+G FRVSLPR++D Sbjct 438 RARASGGTGLGLSIVDSLVYAHGGRVSVTTAPGQGSRFRVSLPRIAD 484 >gi|145222174|ref|YP_001132852.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] gi|145214660|gb|ABP44064.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium gilvum PYR-GCK] Length=535 Score = 612 bits (1578), Expect = 4e-173, Method: Compositional matrix adjust. Identities = 338/469 (73%), Positives = 386/469 (83%), Gaps = 0/469 (0%) Query 3 RHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITL 62 R+LR +PLRV LVAATL+LVA GL+ASGIAVT+++QH L +R+D LL+ ++ WAQ+ Sbjct 22 RYLRRGVPLRVALVAATLLLVACGLLASGIAVTTIMQHSLMNRVDDTLLDASRGWAQVPR 81 Query 63 PLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIG 122 L NP RPPS FYVR I PDG + +ND A P +PA+N+VG P T+ S+ Sbjct 82 RLPTITVDDPNPARPPSDFYVRGIDPDGHVWMLINDREAEPELPADNNVGPEPRTVGSVD 141 Query 123 GSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRR 182 S WRA++VR G LTTVAIDL+DV+ST+RSLV QVGIG+AVL+V G+AGYAVV R Sbjct 142 HSDVQWRAMTVRGLRGELTTVAIDLSDVKSTMRSLVYTQVGIGAAVLLVLGIAGYAVVHR 201 Query 183 SLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEK 242 SLRPL+E EQTAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ A+A +ESSAEK Sbjct 202 SLRPLSEVEQTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQHAMALSESSAEK 261 Query 243 ARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVD 302 AR SEDRMR+FITDASHELRTPLTTIRGFAELYRQGAARDV ML+ RI+SE+ RMGLLV+ Sbjct 262 ARSSEDRMRRFITDASHELRTPLTTIRGFAELYRQGAARDVEMLMGRIKSESRRMGLLVE 321 Query 303 DLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESR 362 DLLLLARLDA RPLE RVDLLALASD HDA+++ PKRRI +EV DGPGTPEVLGDE+R Sbjct 322 DLLLLARLDAQRPLEHRRVDLLALASDTVHDAQSIAPKRRIRMEVFDGPGTPEVLGDEAR 381 Query 363 LRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRAD 422 LRQVL NLVANA+QHTPESA VTVRVGT D AI+EV D+GPGM+ EDA RVFERFYRAD Sbjct 382 LRQVLSNLVANALQHTPESAGVTVRVGTADDTAIVEVCDEGPGMTGEDAQRVFERFYRAD 441 Query 423 SSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 SSRARASGGTGLGLSIVDSLV AHGG V+VTTA G GC F V LPRV+D Sbjct 442 SSRARASGGTGLGLSIVDSLVYAHGGRVSVTTAPGCGCRFTVRLPRVTD 490 >gi|315442612|ref|YP_004075491.1| signal transduction histidine kinase [Mycobacterium sp. Spyr1] gi|315260915|gb|ADT97656.1| signal transduction histidine kinase [Mycobacterium sp. Spyr1] Length=509 Score = 609 bits (1570), Expect = 3e-172, Method: Compositional matrix adjust. Identities = 335/463 (73%), Positives = 382/463 (83%), Gaps = 0/463 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLRV LVAATL+LVA GL+ASGIAVT+++QH L +R+D LL+ ++ WAQ+ L Sbjct 1 MPLRVALVAATLLLVACGLLASGIAVTTIMQHSLMNRVDDTLLDASRGWAQVPRRLPTIT 60 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 NP RPPS FYVR I PDG + +ND A P +PA+N+VG P T+ S+ S W Sbjct 61 VDDPNPARPPSDFYVRGIDPDGHVWMLINDREAEPELPADNNVGPEPRTVGSVDHSDVQW 120 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 RA++VR G LTTVAIDL+DV+ST+RSLV QVGIG+AVL+V G+AGYAVV RSLRPL+ Sbjct 121 RAMTVRGLRGELTTVAIDLSDVKSTMRSLVYTQVGIGAAVLLVLGIAGYAVVHRSLRPLS 180 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E EQTAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ A+A +ESSAEKAR SED Sbjct 181 EVEQTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQHAMALSESSAEKARSSED 240 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV ML+ RIESE+ RMGLLV+DLLLLA Sbjct 241 RMRRFITDASHELRTPLTTIRGFAELYRQGAARDVEMLMGRIESESRRMGLLVEDLLLLA 300 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLDA RPLE RVDLLALASD HDA+++ PKRRI +EV DGPGTPEVLGDE+RLRQVL Sbjct 301 RLDAQRPLEHRRVDLLALASDTVHDAQSIAPKRRIRMEVFDGPGTPEVLGDEARLRQVLS 360 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NLVANA+QHTPESA VTVRVGT D AI+EV D+GPGM+ EDA RVFERFYRADSSRARA Sbjct 361 NLVANALQHTPESAGVTVRVGTADDTAIVEVCDEGPGMTGEDAQRVFERFYRADSSRARA 420 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 SGGTGLGLSIVDSLV AHGG V+VTTA G GC F V LPR++D Sbjct 421 SGGTGLGLSIVDSLVYAHGGRVSVTTAPGCGCRFTVRLPRITD 463 >gi|126437537|ref|YP_001073228.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. JLS] gi|126237337|gb|ABO00738.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. JLS] Length=473 Score = 596 bits (1536), Expect = 3e-168, Method: Compositional matrix adjust. Identities = 334/468 (72%), Positives = 391/468 (84%), Gaps = 0/468 (0%) Query 5 LRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPL 64 +RG +PLR+ LVAATL+LVA GL+ASGIAVTS+++H L SR+D+ LL+ ++ WAQ L Sbjct 1 MRGGVPLRLGLVAATLVLVAFGLLASGIAVTSIMRHSLESRVDQTLLDASRSWAQAPRQL 60 Query 65 APDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGS 124 P G NP RPPS FYVR PDG+ +TA+ND A P +P++NDVG P T+ S+ S Sbjct 61 PVAPLAGPNPARPPSDFYVRGTGPDGRMWTAVNDREAEPVLPSSNDVGPVPVTVRSVNHS 120 Query 125 KTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSL 184 WRA++VR G LTTVAIDL++V+STVR+LV Q+GIG+AVL+V GVAGYAVV+RSL Sbjct 121 DVEWRAMTVRGPSGALTTVAIDLSEVQSTVRALVWSQIGIGAAVLLVLGVAGYAVVQRSL 180 Query 185 RPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKAR 244 RPL E E+TAAAI AGQLDRRVPQ PRTEVGRLSLALNGMLAQIQRAVAS+ESSA+ AR Sbjct 181 RPLTEVEETAAAIAAGQLDRRVPQRDPRTEVGRLSLALNGMLAQIQRAVASSESSADAAR 240 Query 245 DSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDL 304 SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV ML++RIESE+ RMGLLV+DL Sbjct 241 TSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVEMLMNRIESESRRMGLLVEDL 300 Query 305 LLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLR 364 LLLARLDA RPLE RVDLLALA+DA HDA+++ P+R ITL VLDGPGTPEV+GDE+RLR Sbjct 301 LLLARLDAQRPLERHRVDLLALATDAVHDAQSIAPERTITLHVLDGPGTPEVVGDEARLR 360 Query 365 QVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSS 424 QVL NLVANA+QHTP+ A +TVRVGT+ +A+LEV D+GPGM++EDA RVFERFYR DSS Sbjct 361 QVLGNLVANALQHTPKHAGITVRVGTDETNAVLEVCDEGPGMTEEDARRVFERFYRTDSS 420 Query 425 RARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 RAR SGGTGLGLSIVDSLV AHGG V VTTA G+GC F V LPR SDV Sbjct 421 RARESGGTGLGLSIVDSLVLAHGGTVRVTTAPGQGCRFTVQLPRFSDV 468 >gi|108801552|ref|YP_641749.1| periplasmic sensor signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119870706|ref|YP_940658.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. KMS] gi|108771971|gb|ABG10693.1| periplasmic sensor signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119696795|gb|ABL93868.1| integral membrane sensor signal transduction histidine kinase [Mycobacterium sp. KMS] Length=473 Score = 595 bits (1535), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 334/468 (72%), Positives = 392/468 (84%), Gaps = 0/468 (0%) Query 5 LRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPL 64 +RG +PLR+ LVAATL+LVA GL+ASGIAVTS+++H L SR+D+ LL+ ++ WAQ L Sbjct 1 MRGGVPLRLGLVAATLVLVAFGLLASGIAVTSIMRHSLESRVDQTLLDASRSWAQAPRQL 60 Query 65 APDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGS 124 P G NP RPPS FYVR PDG+ +TA+ND A P +P++NDVG P T+ S+ S Sbjct 61 PVAPLAGPNPARPPSDFYVRGTGPDGRMWTAVNDREAEPVLPSSNDVGPVPVTVRSVNHS 120 Query 125 KTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSL 184 WRA++VR G LTTVAIDL++V+STVR+LV Q+GIG+AVL+V GVAGYAVV+RSL Sbjct 121 DVEWRAMTVRGPGGALTTVAIDLSEVQSTVRALVWSQIGIGAAVLLVLGVAGYAVVQRSL 180 Query 185 RPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKAR 244 RPL E E+TAAAI AGQLDRRVPQ PRTEVGRLSLALNGMLAQIQRAVAS+ESSA+ AR Sbjct 181 RPLTEVEETAAAIAAGQLDRRVPQRDPRTEVGRLSLALNGMLAQIQRAVASSESSADAAR 240 Query 245 DSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDL 304 SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV ML++RIESE+ RMGLLV+DL Sbjct 241 TSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVEMLMNRIESESRRMGLLVEDL 300 Query 305 LLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLR 364 LLLARLDA RPLE RVDLLALA+DA HDA+++ P+R ITL+VLDGPGTPEV+GDE+RLR Sbjct 301 LLLARLDAQRPLERHRVDLLALATDAVHDAQSIAPERTITLQVLDGPGTPEVVGDEARLR 360 Query 365 QVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSS 424 QVL NLVANA+QHTP+ A +TVRVGT+ +A+LEV D+GPGM++EDA RVFERFYR DSS Sbjct 361 QVLGNLVANALQHTPKHAGITVRVGTDETNAVLEVCDEGPGMTEEDARRVFERFYRTDSS 420 Query 425 RARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 RAR SGGTGLGLSIVDSLV AHGG V VTTA G+GC F V LPR SDV Sbjct 421 RARESGGTGLGLSIVDSLVLAHGGTVRVTTAPGQGCRFTVHLPRFSDV 468 >gi|333992253|ref|YP_004524867.1| two-component system response phosphate sensor kinase PhoR [Mycobacterium sp. JDM601] gi|333488221|gb|AEF37613.1| two-component system response phosphate sensor kinase PhoR [Mycobacterium sp. JDM601] Length=485 Score = 577 bits (1488), Expect = 1e-162, Method: Compositional matrix adjust. Identities = 317/474 (67%), Positives = 371/474 (79%), Gaps = 5/474 (1%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWA-- 58 MA+ RG LPLRV LVAATL +VA GL+A G AVT++L+HRL SRID L++ A WA Sbjct 1 MAKPPRGILPLRVSLVAATLAMVAIGLLAQGYAVTTILRHRLISRIDATLIDAAHGWALE 60 Query 59 -QITLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTT 117 + P+ D P NP RPP+ FYVR + PDG +T +ND A P +P +NDVG P T Sbjct 61 QRGRSPVKADEDP--NPGRPPTSFYVRDVDPDGSVWTVVNDQNAEPLLPPDNDVGSVPVT 118 Query 118 LPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGY 177 + S+ GS WRA+SV A G L TVA DL+D R+T+R L +V IG VL+V G AGY Sbjct 119 IGSVDGSGVQWRALSVHAESGRLITVARDLSDPRATLRYLAWSRVAIGVGVLLVLGAAGY 178 Query 178 AVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAE 237 VV RSLRPLAE E+TAAAI AGQLDRRVP+ PRTEVGRLSLALNGMLAQIQ+AVAS+ Sbjct 179 LVVNRSLRPLAEVERTAAAIAAGQLDRRVPERDPRTEVGRLSLALNGMLAQIQQAVASSI 238 Query 238 SSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRM 297 +SA+ AR SE+RMR+FITDASHELRTPLTTIRGFAELYRQGAARDV +L+SRIESEA RM Sbjct 239 ASADNARVSEERMRRFITDASHELRTPLTTIRGFAELYRQGAARDVELLMSRIESEARRM 298 Query 298 GLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVL 357 GLLV+DLLLLAR+DA RPLE VDLL LA+DA HDARA+ P R I LEV DGPGTPEVL Sbjct 299 GLLVEDLLLLARMDAQRPLERRWVDLLVLATDAVHDARAIAPDRAIELEVFDGPGTPEVL 358 Query 358 GDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFER 417 GDE+RLRQVL NL++NA++HTPE A +TVRVGT G DAILEV D GPGMS+ED R FER Sbjct 359 GDEARLRQVLSNLMSNALEHTPEDAAITVRVGTAGGDAILEVVDQGPGMSEEDVQRAFER 418 Query 418 FYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 F+R DSSRAR SGGTGLGLSIVDSL+ AH G VTV++ G GC FRV++PR+++ Sbjct 419 FFRTDSSRARVSGGTGLGLSIVDSLIRAHHGTVTVSSPPGHGCTFRVAVPRLAE 472 >gi|118468443|ref|YP_890098.1| sensor histidine kinase PhoR [Mycobacterium smegmatis str. MC2 155] gi|118169730|gb|ABK70626.1| sensor histidine kinase PhoR [Mycobacterium smegmatis str. MC2 155] Length=475 Score = 556 bits (1432), Expect = 4e-156, Method: Compositional matrix adjust. Identities = 334/472 (71%), Positives = 391/472 (83%), Gaps = 1/472 (0%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 M R RG +PLRV LVAA L+LVA GL+ASGIAVTS+++H SRID+ LL+ ++ WAQ Sbjct 1 MNRGRRG-IPLRVGLVAAALVLVACGLLASGIAVTSIMRHTEVSRIDQTLLDASRSWAQA 59 Query 61 TLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPS 120 P G NP RPPS FYVR DG+++ A+ND A PA+P NNDVG P T+ S Sbjct 60 PRRAPTTPLEGPNPARPPSNFYVRGFDEDGRTWIAVNDREAEPALPENNDVGPVPVTVGS 119 Query 121 IGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVV 180 I S WRA++VR +G LTTVAIDL++V+S+VR+LV QVGIG+AVL+V GV GY VV Sbjct 120 IDKSNVEWRAMTVRGPNGELTTVAIDLSEVQSSVRALVWSQVGIGAAVLLVLGVVGYVVV 179 Query 181 RRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSA 240 RSLRPL E E+TAAAI AGQLDRRVP+ PRTEVGRLS ALNGMLAQIQRAVA++E+SA Sbjct 180 HRSLRPLVEVERTAAAIAAGQLDRRVPERDPRTEVGRLSSALNGMLAQIQRAVAASEASA 239 Query 241 EKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLL 300 E+AR SEDRMR+FITDASHELRTPLTTIRGFAELYRQGAARD+ ML+ RIESE+ RMGLL Sbjct 240 EQARSSEDRMRRFITDASHELRTPLTTIRGFAELYRQGAARDIEMLMGRIESESRRMGLL 299 Query 301 VDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDE 360 V+DLLLLARLDA RPLE RVDLLALA+DA HDA+++ PKRR+ +EV DGPGTPEVLGDE Sbjct 300 VEDLLLLARLDAQRPLERRRVDLLALATDAVHDAQSIAPKRRVKMEVFDGPGTPEVLGDE 359 Query 361 SRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYR 420 +RLRQV+ NLVANA+QHTPE+A +TVRVGT+GD+A+LEV D+GPGMSQEDA RVFERFYR Sbjct 360 ARLRQVIGNLVANAVQHTPETAGITVRVGTDGDNAVLEVCDEGPGMSQEDARRVFERFYR 419 Query 421 ADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDV 472 AD+SR RASGGTGLGLSIVDSLV AHGG V VTTALG+G F VSLPR++D+ Sbjct 420 ADTSRTRASGGTGLGLSIVDSLVYAHGGTVKVTTALGKGSRFTVSLPRIADL 471 >gi|169627777|ref|YP_001701426.1| putative sensor histidine kinase PhoR [Mycobacterium abscessus ATCC 19977] gi|169239744|emb|CAM60772.1| Putative sensor histidine kinase PhoR [Mycobacterium abscessus] Length=525 Score = 516 bits (1330), Expect = 3e-144, Method: Compositional matrix adjust. Identities = 301/461 (66%), Positives = 346/461 (76%), Gaps = 6/461 (1%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLRV LV TL+LVA GLVASGIAVT+ +Q + +R DR L++ A WA P P Sbjct 32 VPLRVSLVVGTLVLVALGLVASGIAVTTTMQRTMMNRADRELIDAANGWANRPPPPPPAF 91 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNT-AIPAVPANNDVGRHPTTLPSIGGSKTL 127 + RPPS F++R G+ LND A P +P +NDVG P T+ S G T Sbjct 92 ETTRH--RPPSLFFIRTTDDRGRVVIMLNDRARADPDLPFDNDVGGRPVTVRSSDGG-TE 148 Query 128 WRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPL 187 WRAVS + G TTVA D+ DVR+TVR L+ LQV IG AVL V GVAGY +V RSLRPL Sbjct 149 WRAVSRHDALGGYTTVARDITDVRTTVRDLLWLQVAIGIAVLTVLGVAGYWLVHRSLRPL 208 Query 188 AEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSE 247 AE E TAA I AG LDRRVP+ PRTEVGRLSLALNGMLAQIQRAVA +E SA+ AR SE Sbjct 209 AEVEATAADIAAGHLDRRVPERDPRTEVGRLSLALNGMLAQIQRAVADSEKSAKAARTSE 268 Query 248 DRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLL 307 +RMR+FITDASHELRTPLTTIRG+AELYRQGAA D ++L RIE E++RMG LV+DLLLL Sbjct 269 ERMRRFITDASHELRTPLTTIRGYAELYRQGAATDTELVLGRIEGESTRMGQLVEDLLLL 328 Query 308 ARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVL 367 ARLDAHRP+E VDLL LA+DA HDA+A P+R + LEV DGPGTPEV+GDE RLRQVL Sbjct 329 ARLDAHRPMEQRLVDLLVLATDAVHDAKATAPERDVELEVFDGPGTPEVIGDELRLRQVL 388 Query 368 RNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRAR 427 NLV+NA+ HT +A V VRVGTEGDDA+LEV D GPGM++ DA RVFERFYRADSSR R Sbjct 389 GNLVSNALGHT--TAAVRVRVGTEGDDAVLEVIDRGPGMTKTDAERVFERFYRADSSRTR 446 Query 428 ASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 +SGGTGLGLSIVD+L AAHGG VTV TA G GC F V LPR Sbjct 447 SSGGTGLGLSIVDALTAAHGGTVTVHTAPGAGCRFEVRLPR 487 >gi|226364244|ref|YP_002782026.1| two-component histidine kinase PhoR [Rhodococcus opacus B4] gi|226242733|dbj|BAH53081.1| two-component histidine kinase PhoR [Rhodococcus opacus B4] Length=488 Score = 492 bits (1266), Expect = 7e-137, Method: Compositional matrix adjust. Identities = 279/462 (61%), Positives = 337/462 (73%), Gaps = 2/462 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR+ LV A L+L A GL+ASG+AVTS L++ LT+R+D L + AQ WA+ P Sbjct 29 MPLRITLVGAVLLLSALGLLASGVAVTSALENSLTNRVDHQLHDAAQGWAKPGKSRPLPP 88 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 NP RPPS FYVR +G +ND + PA+PA D P T+ S S W Sbjct 89 PDEPNPGRPPSPFYVRTTLANGTVLREINDESVSPALPA--DPASVPVTVGSTDNSDVRW 146 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 R ++ A DG TTVA+ L + TV LV+LQ+ IG VL+ GV Y VVRRSLRPL Sbjct 147 RVLTTTAPDGTETTVAMTLTENDETVNRLVVLQLIIGVVVLIALGVVAYFVVRRSLRPLV 206 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E E+TAAAI +G L RRVP+ RTE+GRLS+ALNGMLAQIQ A A+ E+S E AR SE+ Sbjct 207 EVEETAAAIASGDLHRRVPERDDRTEIGRLSVALNGMLAQIQHAFAATEASEESARRSEE 266 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 +MR+F+ DASHELRTPLTTIRGFAELYRQGA D L++RIE EASRMGLLV+DLL+LA Sbjct 267 KMRRFVADASHELRTPLTTIRGFAELYRQGAMTDTETLMNRIEGEASRMGLLVEDLLMLA 326 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLDA RPLE VDLL++ASDA H ARA+ P+R ITL+V GPGTPEV+GDE+RLRQVL Sbjct 327 RLDAQRPLETRPVDLLSVASDAVHGARAVAPERSITLDVRPGPGTPEVIGDEARLRQVLG 386 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NL+ANA++HTP +ADVTVR+GT +LEVAD GPG+++EDA RVFERFYR D+SR R Sbjct 387 NLLANAVKHTPATADVTVRLGTTEHSVVLEVADTGPGLTEEDAARVFERFYRTDASRTRE 446 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVS 470 SGG+GLGLSIV +LVAAH GAVTV + GEG FRV LPR S Sbjct 447 SGGSGLGLSIVAALVAAHRGAVTVDSRPGEGATFRVELPRSS 488 >gi|111021713|ref|YP_704685.1| sensor kinase, two-component system [Rhodococcus jostii RHA1] gi|110821243|gb|ABG96527.1| sensor kinase, two-component system [Rhodococcus jostii RHA1] Length=460 Score = 488 bits (1255), Expect = 1e-135, Method: Compositional matrix adjust. Identities = 276/460 (60%), Positives = 333/460 (73%), Gaps = 2/460 (0%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR+ LV A L+L A GL+ASG+AVTS L++ LT+R+D L + AQ WA+ P Sbjct 1 MPLRITLVGAVLLLSALGLLASGVAVTSALENSLTNRVDHQLHDAAQGWAKPGKSRPLPP 60 Query 69 YPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLW 128 NP RPPS FYVR +G +ND + PA+P N G P T+ S S W Sbjct 61 PDEPNPGRPPSPFYVRTTLANGTVLREINDESVSPALPENPASG--PETVGSTDNSDVRW 118 Query 129 RAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLA 188 R ++ A DG TTVA+ L + TV L++LQ+ IG VL+ GV Y VVRRSLRPL Sbjct 119 RVLTTTAPDGTETTVAMTLTENDETVNRLIVLQLIIGVVVLIALGVVAYFVVRRSLRPLV 178 Query 189 EFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSED 248 E E+TAAAI +G L RRVP+ RTE+GRLS+ALNGMLAQIQ A A+ E+S E AR SE+ Sbjct 179 EVEETAAAIASGDLHRRVPERDDRTEIGRLSVALNGMLAQIQHAFAATEASEESARRSEE 238 Query 249 RMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLA 308 +MR+F+ DASHELRTPLTTIRGFAELYRQGA D L+SRIE EASRMGLLV+DLL+LA Sbjct 239 KMRRFVADASHELRTPLTTIRGFAELYRQGAMTDTETLMSRIEGEASRMGLLVEDLLMLA 298 Query 309 RLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLR 368 RLDA RPLE VDLL++ASDA H ARA+ P R I L+V GPGTPEV+GDE+RLRQVL Sbjct 299 RLDAQRPLETRPVDLLSVASDAVHGARAVAPDRSIALDVRPGPGTPEVIGDEARLRQVLG 358 Query 369 NLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARA 428 NL+ANA++HTP +ADVTVR+ T +LEVAD GPG+S+EDA RVFERFYR D+SR R Sbjct 359 NLLANAVKHTPATADVTVRLSTTERSVVLEVADTGPGLSEEDAARVFERFYRTDASRTRE 418 Query 429 SGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 SGG+GLGLSIV +LVAAH G+VTV + GEG FRV LPR Sbjct 419 SGGSGLGLSIVAALVAAHRGSVTVDSRPGEGATFRVELPR 458 >gi|226304477|ref|YP_002764435.1| two-component histidine kinase PhoR [Rhodococcus erythropolis PR4] gi|226183592|dbj|BAH31696.1| two-component histidine kinase PhoR [Rhodococcus erythropolis PR4] Length=483 Score = 464 bits (1195), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 271/471 (58%), Positives = 330/471 (71%), Gaps = 13/471 (2%) Query 6 RGR-----LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 RGR LPLR LVAA L+L A GL+ASG+AVTS L++ LT R D+ L E WA+ Sbjct 13 RGRFRLHSLPLRFTLVAALLVLAALGLLASGVAVTSALENSLTQRTDKTLYEAVDGWAK- 71 Query 61 TLPLAPDPYPGHN---PDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTT 117 P D P + RPPS F+VR ++PDG+ +T LND + + D P T Sbjct 72 --PHTRDLQPPSDVGPQTRPPSPFFVRTVTPDGKVFT-LNDKSTTTEPDLSKDSTNGPIT 128 Query 118 LPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGY 177 + S GS WR ++ D TT+ + L D+ TV LV LQ+GIG VL++ G Y Sbjct 129 VGSSDGSDVNWRVLTTVRDD-TTTTIGVRLTDIEQTVDDLVGLQLGIGLVVLLILGGGAY 187 Query 178 AVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAE 237 VVRRSLRPL E E+TAAAI AG L RRVP+ RTEVGRLS+ALNGMLAQIQ A A+ E Sbjct 188 FVVRRSLRPLVEVEETAAAIAAGDLHRRVPERDDRTEVGRLSVALNGMLAQIQHAFAATE 247 Query 238 SSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRM 297 +S E AR SE++MR+F+ DASHELRTPLTTIRGFAELYRQGA D L++RIE EASRM Sbjct 248 ASEESARRSEEKMRRFVGDASHELRTPLTTIRGFAELYRQGAMTDTETLMNRIEGEASRM 307 Query 298 GLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVL 357 GLLV+DLL+LARLD RPLE VDLLA+A+D+ ARA+ P R + L++ GPG PEV Sbjct 308 GLLVEDLLMLARLDEQRPLENKPVDLLAVAADSVQAARAIAPDRTVELQMTGGPGLPEVQ 367 Query 358 GDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFER 417 GDE+RLRQV+ NLV NAI+HTP A VTVRVGT + A++EV+D G G+S EDA R+FER Sbjct 368 GDEARLRQVVANLVGNAIKHTPPDAQVTVRVGTTENSAVVEVSDTGQGLSDEDAARIFER 427 Query 418 FYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 FYRAD+SR R +GG GLGLSIV +LVAAH G V+V T+LG+G FRV LPR Sbjct 428 FYRADTSRTRETGGAGLGLSIVSALVAAHDGTVSVETSLGQGTTFRVELPR 478 >gi|229494556|ref|ZP_04388319.1| sensor kinase, two-component system [Rhodococcus erythropolis SK121] gi|229318918|gb|EEN84776.1| sensor kinase, two-component system [Rhodococcus erythropolis SK121] Length=483 Score = 458 bits (1179), Expect = 9e-127, Method: Compositional matrix adjust. Identities = 272/471 (58%), Positives = 329/471 (70%), Gaps = 13/471 (2%) Query 6 RGR-----LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQ- 59 RGR LPLR LVAA L+L A GL+ASG+AVTS L++ LT R D+ L E WA+ Sbjct 13 RGRFRLHSLPLRFTLVAALLVLAALGLLASGVAVTSALENSLTQRTDKTLYEAVDGWAKP 72 Query 60 ITLPLAP--DPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTT 117 + L P D PG RPPS F+VR ++PDG+ LND + + D P T Sbjct 73 HSRDLQPPSDVGPGT---RPPSPFFVRTVTPDGR-VIILNDKSTTTEPDLSKDSTNGPIT 128 Query 118 LPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGY 177 + S GS WR ++ TT+ + L D TV LV LQ+GIG VL++ G A Y Sbjct 129 VGSSDGSDVNWRVLTTVRDG-TTTTIGVRLTDNEQTVDDLVGLQLGIGLVVLLILGGAAY 187 Query 178 AVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAE 237 VVRRSLRPL E E+TAAAI AG L RRVP+ RTEVGRLS+ALNGMLAQIQ A A+ E Sbjct 188 FVVRRSLRPLVEVEETAAAIAAGDLHRRVPERDDRTEVGRLSVALNGMLAQIQHAFAATE 247 Query 238 SSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRM 297 +S E AR SE++MR+F+ DASHELRTPLTTIRGFAELYRQGA D L++RIE EASRM Sbjct 248 ASEESARRSEEKMRRFVGDASHELRTPLTTIRGFAELYRQGAMTDTETLMNRIEGEASRM 307 Query 298 GLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVL 357 GLLV+DLL+LARLD RPLE VDLLA+A+D+ ARA+ P R + L++ GPG PEV Sbjct 308 GLLVEDLLMLARLDEQRPLENKPVDLLAVAADSVQAARAIAPDRTVELQMTGGPGLPEVH 367 Query 358 GDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFER 417 GDE+RLRQV+ NLV NAI+HTP A VTVRVGT + A++EV+D G G+S EDA R+FER Sbjct 368 GDEARLRQVVANLVGNAIKHTPPDAQVTVRVGTTENSAVVEVSDTGQGLSDEDAARIFER 427 Query 418 FYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 FYRAD+SR R +GG GLGLSIV +LVAAH G V+V T+LG+G FRV LPR Sbjct 428 FYRADTSRTRETGGAGLGLSIVSALVAAHDGTVSVETSLGQGTTFRVELPR 478 >gi|312138243|ref|YP_004005579.1| two component system sensor kinase phor [Rhodococcus equi 103S] gi|37813699|gb|AAR04622.1| PhoR [Rhodococcus equi] gi|311887582|emb|CBH46894.1| two component system sensor kinase PhoR [Rhodococcus equi 103S] Length=464 Score = 449 bits (1154), Expect = 7e-124, Method: Compositional matrix adjust. Identities = 265/439 (61%), Positives = 313/439 (72%), Gaps = 3/439 (0%) Query 30 SGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVISPD 89 SG+AVTS +Q L R DR L + A WA+ P P P RPPS FYVR PD Sbjct 28 SGVAVTSAMQSSLIERTDRQLFDAAHGWAKPRDPWPLPPVSAPGPSRPPSAFYVRTTEPD 87 Query 90 GQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDLAD 149 G +ND + ++D G P T+ S+GG WR ++V G TTVA+ L D Sbjct 88 GTVRLEVNDESTNATPEISDDAG--PVTVGSVGGEDIRWRELTVATPSG-TTTVAVKLTD 144 Query 150 VRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQW 209 + +TV LV+LQ+GIG+ VLV G A Y VVRRSLRPL E E+ AA I AG L RRVP+W Sbjct 145 IDATVERLVVLQIGIGAVVLVALGFATYFVVRRSLRPLREVEEIAADIAAGDLHRRVPEW 204 Query 210 HPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIR 269 RTEVGRLS ALNGMLAQIQ A A+ +S E AR SE+RMR+F+ DASHELRTPL TIR Sbjct 205 DQRTEVGRLSSALNGMLAQIQTAFAATAASEESARRSEERMRRFVADASHELRTPLATIR 264 Query 270 GFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASD 329 GFAELYRQGAA D M++SRIE +A RMGLLV+DLLLLAR+DA RP E VDLLA+A+D Sbjct 265 GFAELYRQGAAPDPEMVMSRIEDQAQRMGLLVEDLLLLARMDAQRPFERHPVDLLAVAAD 324 Query 330 AAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVG 389 A HDARA P+RRI LEVL G EVLGD++RLRQV+ NLV NA+ HTP ADVTVRVG Sbjct 325 AVHDARARSPQRRIMLEVLPGSAPAEVLGDDARLRQVVGNLVGNALDHTPAGADVTVRVG 384 Query 390 TEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGA 449 T+G DA++EVAD GPG+++ DA RVFERFYRAD+SR R SGG+GLGLSIV ++VAAHGG Sbjct 385 TDGADAVVEVADTGPGLAEGDAARVFERFYRADASRTRTSGGSGLGLSIVAAIVAAHGGT 444 Query 450 VTVTTALGEGCCFRVSLPR 468 V V +A G G FRV LPR Sbjct 445 VDVDSAPGNGATFRVRLPR 463 >gi|325674849|ref|ZP_08154536.1| phosphate regulon sensor histidine kinase protein PhoR [Rhodococcus equi ATCC 33707] gi|325554435|gb|EGD24110.1| phosphate regulon sensor histidine kinase protein PhoR [Rhodococcus equi ATCC 33707] Length=464 Score = 447 bits (1151), Expect = 1e-123, Method: Compositional matrix adjust. Identities = 265/439 (61%), Positives = 313/439 (72%), Gaps = 3/439 (0%) Query 30 SGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVISPD 89 SG+AVTS +Q L R DR L + A WA+ P P P RPPS FYVR PD Sbjct 28 SGVAVTSAMQSSLIERTDRQLFDAAHGWAKPRDPWPLPPVSAPGPSRPPSAFYVRTTEPD 87 Query 90 GQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDLAD 149 G +ND + ++D G P T+ S+GG WR ++V G TTVA+ L D Sbjct 88 GTVRLEVNDESTNATPEISDDPG--PVTVGSVGGEDIRWRELTVATPSG-TTTVAVKLTD 144 Query 150 VRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQW 209 + +TV LV+LQ+GIG+ VLV G A Y VVRRSLRPL E E+ AA I AG L RRVP+W Sbjct 145 IDATVERLVVLQIGIGAVVLVALGFATYFVVRRSLRPLREVEEIAADIAAGDLHRRVPEW 204 Query 210 HPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIR 269 RTEVGRLS ALNGMLAQIQ A A+ +S E AR SE+RMR+F+ DASHELRTPL TIR Sbjct 205 DQRTEVGRLSSALNGMLAQIQTAFAATAASEESARRSEERMRRFVADASHELRTPLATIR 264 Query 270 GFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASD 329 GFAELYRQGAA D M++SRIE +A RMGLLV+DLLLLAR+DA RP E VDLLA+A+D Sbjct 265 GFAELYRQGAAPDPEMVMSRIEDQAQRMGLLVEDLLLLARMDAQRPFERHPVDLLAVAAD 324 Query 330 AAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVG 389 A HDARA P+RRI LEVL G EVLGD++RLRQV+ NLV NA+ HTP ADVTVRVG Sbjct 325 AVHDARARSPQRRIMLEVLPGSAPAEVLGDDARLRQVVGNLVGNALDHTPAEADVTVRVG 384 Query 390 TEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGA 449 T+G DA++EVAD GPG+++ DA RVFERFYRAD+SR R SGG+GLGLSIV ++VAAHGG Sbjct 385 TDGADAVVEVADTGPGLAEGDAARVFERFYRADASRTRTSGGSGLGLSIVAAIVAAHGGT 444 Query 450 VTVTTALGEGCCFRVSLPR 468 V V +A G G FRV LPR Sbjct 445 VDVDSAPGNGATFRVRLPR 463 >gi|324106155|gb|ADY18321.1| hypothetical protein [Rhodococcus rhodochrous] Length=429 Score = 410 bits (1053), Expect = 4e-112, Method: Compositional matrix adjust. Identities = 248/428 (58%), Positives = 304/428 (72%), Gaps = 2/428 (0%) Query 42 LTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTA 101 L SR+DR L E A+ WA+ P P N RPPS FYV+V+ DG+ +ND + Sbjct 1 LLSRVDRDLEEAARTWARPDRPPPAPPLDAPNSRRPPSPFYVQVVDADGRLLFVVNDEST 60 Query 102 IPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQ 161 P VP + GR P T+ S G WR +S + G +TTV + LA+ TV LV+LQ Sbjct 61 APDVP-DEPTGR-PVTVGSAGDDGPHWRVMSTENASGVVTTVGMSLAEAEETVDRLVVLQ 118 Query 162 VGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLA 221 IG+ VLV VAG VVR SLRPL E E+TAAAI G L RVP+ PRTE+GRLS+ Sbjct 119 TVIGAVVLVALAVAGGVVVRMSLRPLDEVERTAAAIAEGDLSERVPEGDPRTEIGRLSVT 178 Query 222 LNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAAR 281 N ML +I+ A A+ +S E AR SE++MR+F+ DA HELRTPLTTIRGFAELYRQGA+ Sbjct 179 FNAMLGRIESAFAATAASEESARRSEEKMRRFVADAGHELRTPLTTIRGFAELYRQGAST 238 Query 282 DVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKR 341 D GML+ RIE EA RMGLLV+DLL+LARLD RPL+ VDLLA+A+DA H+ARA+ P+R Sbjct 239 DTGMLMERIEREARRMGLLVEDLLMLARLDEQRPLDRSPVDLLAVAADAVHNARAVAPER 298 Query 342 RITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVAD 401 +TL+++DGPG PEVLGD++RLRQVL NLV NA+ HTP ADVTVRVGT DA+LEVAD Sbjct 299 AVTLDIIDGPGIPEVLGDDARLRQVLSNLVTNALTHTPPDADVTVRVGTADSDAVLEVAD 358 Query 402 DGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCC 461 GPG+ +D RVFERFYRAD+SR R+SGG+GLGLSIV +LVAAHGG V V + G G Sbjct 359 TGPGLDPDDRERVFERFYRADASRTRSSGGSGLGLSIVAALVAAHGGKVEVESEKGVGSI 418 Query 462 FRVSLPRV 469 FRV +PR+ Sbjct 419 FRVRIPRL 426 >gi|294996235|ref|ZP_06801926.1| two component system sensor kinase phoR [Mycobacterium tuberculosis 210] Length=224 Score = 409 bits (1050), Expect = 7e-112, Method: Compositional matrix adjust. Identities = 208/209 (99%), Positives = 209/209 (100%), Gaps = 0/209 (0%) Query 277 QGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARA 336 +GAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARA Sbjct 16 KGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARA 75 Query 337 MDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAI 396 MDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAI Sbjct 76 MDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAI 135 Query 397 LEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTAL 456 LEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTAL Sbjct 136 LEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTAL 195 Query 457 GEGCCFRVSLPRVSDVDQLSLTPVVPGPP 485 GEGCCFRVSLPRVSDVDQLSLTPVVPGPP Sbjct 196 GEGCCFRVSLPRVSDVDQLSLTPVVPGPP 224 >gi|319951281|ref|ZP_08025116.1| two-component histidine kinase PhoR [Dietzia cinnamea P4] gi|319435054|gb|EFV90339.1| two-component histidine kinase PhoR [Dietzia cinnamea P4] Length=487 Score = 405 bits (1040), Expect = 1e-110, Method: Compositional matrix adjust. Identities = 260/475 (55%), Positives = 315/475 (67%), Gaps = 13/475 (2%) Query 8 RLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWA----QITLP 63 RLPLRV LV + L A LVASG+AVT L + R D L E + WA ++ Sbjct 15 RLPLRVSLVLLAVALTALALVASGVAVTRALDASMLDRTDAALQEAERGWARPLGELPAN 74 Query 64 LAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGG 123 P P P+ PPSRFYV+V G +ND + PAV D G P T+PS Sbjct 75 PPPPPARAPGPESPPSRFYVQVRDASGAVLVEINDEDSAPAV-YGLDAG-EPATVPSEED 132 Query 124 SKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRS 183 WRA+ G TVA L + R+ V+ LV LQ+GIG+A+L +A Y VRRS Sbjct 133 GSAPWRALRFNGPGGETVTVATPLTENRAVVQRLVYLQLGIGAAILAALALAAYVTVRRS 192 Query 184 LRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKA 243 LRPL E E+TAAAI G L RRVP PRTEVG L++A+N MLA+IQ ++A A + + A Sbjct 193 LRPLREVERTAAAIAGGDLSRRVPDGDPRTEVGTLAVAVNEMLARIQTSMADAARAEDAA 252 Query 244 RDSEDR-------MRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASR 296 RDS MR+F+ DA H+LRTPLTTIRGFAEL+RQGAA D L+ RIESEA R Sbjct 253 RDSAAAARQSEAAMRRFVADAGHDLRTPLTTIRGFAELHRQGAADDTDRLMRRIESEARR 312 Query 297 MGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEV 356 MG+LV+DLL LAR+D RP+ RVDLLALA+DA HDAR + P R + LEV+DGPGTPEV Sbjct 313 MGVLVEDLLTLARMDEQRPIARDRVDLLALAADAVHDARVLAPDRTVGLEVIDGPGTPEV 372 Query 357 LGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFE 416 LGDE RLRQVL NLV NA++HTP +TVRVGTE DDA+LEVAD GPGM+ ++A R FE Sbjct 373 LGDEVRLRQVLGNLVDNALRHTPPGVPMTVRVGTEADDALLEVADAGPGMTADEAERAFE 432 Query 417 RFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSD 471 RF+RAD+SR ++GG+GLGL+I SLV AH G+VTV TA G G FRV LPRV D Sbjct 433 RFFRADASRTSSTGGSGLGLAIARSLVEAHDGSVTVETAPGRGATFRVRLPRVRD 487 >gi|294993217|ref|ZP_06798908.1| two component system sensor kinase phoR [Mycobacterium tuberculosis 210] Length=203 Score = 402 bits (1034), Expect = 5e-110, Method: Compositional matrix adjust. Identities = 201/203 (99%), Positives = 202/203 (99%), Gaps = 0/203 (0%) Query 28 VASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVIS 87 +ASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVIS Sbjct 1 MASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDPYPGHNPDRPPSRFYVRVIS 60 Query 88 PDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDL 147 PDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDL Sbjct 61 PDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDL 120 Query 148 ADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVP 207 ADVRSTVRSLVLLQVGIGSAVLVV GVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVP Sbjct 121 ADVRSTVRSLVLLQVGIGSAVLVVLGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVP 180 Query 208 QWHPRTEVGRLSLALNGMLAQIQ 230 QWHPRTEVGRLSLALNGMLAQIQ Sbjct 181 QWHPRTEVGRLSLALNGMLAQIQ 203 >gi|317509452|ref|ZP_07967070.1| hsp90-like protein [Segniliparus rugosus ATCC BAA-974] gi|316252281|gb|EFV11733.1| hsp90-like protein [Segniliparus rugosus ATCC BAA-974] Length=567 Score = 399 bits (1024), Expect = 7e-109, Method: Compositional matrix adjust. Identities = 213/392 (55%), Positives = 271/392 (70%), Gaps = 1/392 (0%) Query 79 SRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDG 138 SR+Y+RV + + P +PA+ R P T+PS G + WRAV + + G Sbjct 163 SRYYIRVGDRVFGRFRGSDGTVVAPQIPADLYQLRTPQTVPSEGDPRLRWRAVWIPSLHG 222 Query 139 YLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIG 198 + VA +L DV + SL+ LQ+ IG+ VL+V G+AGY +VR SLRPL E E+TA I Sbjct 223 DIV-VATELTDVDGNLSSLLTLQLAIGTGVLLVLGLAGYFLVRWSLRPLVEVERTANEIA 281 Query 199 AGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDAS 258 AG L+RRVP W RTEVGRLS ALN MLAQIQ+A A+ ++S EKA+ SE RMRQF+ DAS Sbjct 282 AGNLERRVPDWGERTEVGRLSTALNSMLAQIQQAFAATQASEEKAKSSEGRMRQFVADAS 341 Query 259 HELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLEL 318 HELRTPLT IRGFAEL+R+G + +SRIESEA RMG LV+DLL LAR D RPLEL Sbjct 342 HELRTPLTAIRGFAELHRKGVGVSTAVAMSRIESEAIRMGKLVEDLLALARTDEQRPLEL 401 Query 319 CRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHT 378 VD+ L +DA HDA+A+ P R + ++ G P VLGDE LRQVL NLV+NA+ HT Sbjct 402 EPVDMFQLMTDAVHDAKAIAPDREVVFQLQPSGGAPVVLGDEPCLRQVLSNLVSNALSHT 461 Query 379 PESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSI 438 + A VT+ +G + D +LEV D GPG+S EDA R+FERFYR D SRAR+SGG+GLGL+I Sbjct 462 GDEASVTLWLGGDAQDVLLEVRDTGPGLSPEDAERIFERFYRVDPSRARSSGGSGLGLAI 521 Query 439 VDSLVAAHGGAVTVTTALGEGCCFRVSLPRVS 470 VD++V AHGG +V++ LG G RV LPR++ Sbjct 522 VDAIVRAHGGQASVSSELGAGTTLRVRLPRLA 553 >gi|296392537|ref|YP_003657421.1| integral membrane sensor signal transduction histidine kinase [Segniliparus rotundus DSM 44985] gi|296179684|gb|ADG96590.1| integral membrane sensor signal transduction histidine kinase [Segniliparus rotundus DSM 44985] Length=569 Score = 388 bits (997), Expect = 1e-105, Method: Compositional matrix adjust. Identities = 213/392 (55%), Positives = 270/392 (69%), Gaps = 1/392 (0%) Query 79 SRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTLWRAVSVRASDG 138 +R+YVRV + + P +PA+ R P T+ S G S+ WRAV V + G Sbjct 165 ARYYVRVGDRVYGRFRGADGTVIAPKIPADLWELRTPQTVASEGDSQVRWRAVWVPSLHG 224 Query 139 YLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIG 198 + VA +L+DV + SL+ LQ+ IG+ VL+V G+AGY +VR SLRPL E E+TA I Sbjct 225 DIV-VASELSDVDGNLSSLLTLQLAIGTGVLLVLGLAGYFLVRWSLRPLVEVERTANQIA 283 Query 199 AGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDAS 258 AG L+RRVP W RTEVGRLS ALN MLAQIQ A A+ +S EKA+ SE RMRQF+ DAS Sbjct 284 AGDLERRVPDWGERTEVGRLSKALNSMLAQIQHAFAATLASEEKAKSSERRMRQFVADAS 343 Query 259 HELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLEL 318 HELRTPLT +RGFAEL+R GA + +SRIESEA RMG LV+DLL+LAR D RPLE Sbjct 344 HELRTPLTAMRGFAELHRTGAGVSTTIAMSRIESEAIRMGKLVEDLLVLARTDEERPLEK 403 Query 319 CRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHT 378 VD+L L +DA HDA+A+ P R I E G P VLGD++ LRQVL NLV+NA+ HT Sbjct 404 EPVDMLQLMTDAVHDAKAIAPSRTIRFEFQPSGGAPVVLGDDASLRQVLSNLVSNALLHT 463 Query 379 PESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSI 438 E A VT+ +G + D ++EV D GPG++ EDA RVFERFYR D SR R+SGG+GLGL+I Sbjct 464 GEDATVTLSLGGDAHDVLVEVCDTGPGLAPEDAERVFERFYRVDPSRTRSSGGSGLGLAI 523 Query 439 VDSLVAAHGGAVTVTTALGEGCCFRVSLPRVS 470 V+++V AHGG +V + LG G RV+LPR++ Sbjct 524 VNAIVRAHGGHASVRSELGVGTTLRVTLPRLA 555 >gi|336324699|ref|YP_004604665.1| two-component system sensor histidine kinase [Corynebacterium resistens DSM 45100] gi|336100681|gb|AEI08501.1| two-component system sensor histidine kinase [Corynebacterium resistens DSM 45100] Length=546 Score = 372 bits (955), Expect = 9e-101, Method: Compositional matrix adjust. Identities = 227/499 (46%), Positives = 285/499 (58%), Gaps = 36/499 (7%) Query 1 MARHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQI 60 A H PLR+ LV L GL S VTS LQ + R+D L WA Sbjct 42 FAGHFLSHYPLRISLVVVITALAGVGLTISSAVVTSTLQRFMIQRVDEQLANATATWAHR 101 Query 61 TLPLAPDPYPG----------------------------HNPDRPPSRFYVRVISPDGQ- 91 T Y G + DRPPS FYV V+ DG Sbjct 102 TTSNDTSAYSGLGKSSDLDAQGSTSGSDSDGLRGSYPSKSDVDRPPSDFYVLVV--DGPV 159 Query 92 SYTALND-NTAIPAVPANNDVGRHPTTLPSIGGS--KTLWRAVSVRASDGYLTTVAIDLA 148 +Y N N + P V D PTT+ + GS T WRA SV+ DG +T VA+ LA Sbjct 160 AYEQFNSVNESKPEVRGL-DKPTAPTTVGARAGSASTTAWRAASVQNQDGTVTIVALPLA 218 Query 149 DVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQ 208 D T+ L+ LQV IG L VA +VRR+L+PL + E TA+ I G L++RVP+ Sbjct 219 DEEHTITRLIALQVIIGLIALAAIVVASMYIVRRALKPLNQVEHTASLISRGHLEQRVPK 278 Query 209 WHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTI 268 W P TEVG LS ALN MLAQ+Q A E+S +AR SE MR+FI DASHELRTPLT++ Sbjct 279 WSPNTEVGALSQALNRMLAQVQGAFMHVEASERQARRSEASMRRFIGDASHELRTPLTSV 338 Query 269 RGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALAS 328 RG+AELY+ GA D GM++ RI EA RM LLV+DLL L R+D RPL+ RVD+L L Sbjct 339 RGYAELYQSGATDDAGMVIERISEEAGRMSLLVEDLLALVRMDEGRPLKQDRVDILELVL 398 Query 329 DAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRV 388 AA ARA P RR+++ G P V+GD +RL QV+ NL+ NA++H E A V + + Sbjct 399 HAADSARAGFPGRRVSVNNKCGD-IPVVIGDANRLHQVVGNLLTNALRHGGEDASVQINL 457 Query 389 GTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGG 448 + +E+ADDG G++ ED +FERFYR D SR+RASGG+GLGLSIV SLV AHGG Sbjct 458 SESQREVSIEIADDGRGIAAEDLPHLFERFYRPDVSRSRASGGSGLGLSIVKSLVEAHGG 517 Query 449 AVTVTTALGEGCCFRVSLP 467 ++V + LGEG F V LP Sbjct 518 TISVASTLGEGTTFTVVLP 536 >gi|172041314|ref|YP_001801028.1| two-component system sensor kinase [Corynebacterium urealyticum DSM 7109] gi|171852618|emb|CAQ05594.1| two-component system sensor kinase [Corynebacterium urealyticum DSM 7109] Length=529 Score = 371 bits (952), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 226/482 (47%), Positives = 292/482 (61%), Gaps = 16/482 (3%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITL--PLAP 66 PLRV LV L A GL SG TS LQH + SR+D L WA T + Sbjct 51 FPLRVSLVVVMTFLAALGLSFSGAVTTSTLQHFMVSRVDDQLNSAINGWAYRTTDDERSY 110 Query 67 DPYPGHN---PDRPPSRFYVRVISPDGQ-SYTALNDNTAIPAVPA--NNDVGRHPTTLPS 120 PG + P+RPP+ F+VRV+ DG+ S LN + + P + R P T+P+ Sbjct 111 QDRPGSSTPQPNRPPTDFFVRVV--DGEISIEPLN--SVFDSAPELRGLEQPREPVTVPA 166 Query 121 IGGSKTL--WRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYA 178 GS + WRA SV DG +T VA+ L T+R LV Q+ IG V+ + Sbjct 167 RAGSASHAPWRAASVENQDGTVTIVALPLEGEEHTIRRLVYRQIIIGFLVVASIMIVSQY 226 Query 179 VVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAES 238 +VRR+LRPL + E+TA+ I G LD+RVP W P TEVGRL+ A N MLAQIQ A + + Sbjct 227 LVRRALRPLNQVEETASLISQGHLDQRVPNWEPDTEVGRLAQAFNRMLAQIQGAFLAVGA 286 Query 239 SAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMG 298 S +AR SE MR+FI DASHELRTPLT++RG+AELYR GA D M++ RI EA RMG Sbjct 287 SERQARKSEATMRRFIGDASHELRTPLTSVRGYAELYRSGATDDADMVIGRISDEAERMG 346 Query 299 LLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLG 358 LLV+DLL L R+D RPL+ RVD+L L AA ARA P R I +E G P V+G Sbjct 347 LLVEDLLALVRMDEGRPLQNQRVDVLELTLRAADGARASFPGRNIGVENHYG-SIPVVMG 405 Query 359 DESRLRQVLRNLVANAIQHTPESADVTVR-VGTEGDDAILEVADDGPGMSQEDALRVFER 417 D +RL QV+ NL+ NA++H E A+V + + T + ++V DDG G+ + +FER Sbjct 406 DANRLHQVISNLLTNALKHAGEDANVKISLLKTSPELVTIDVQDDGEGIPADALPHLFER 465 Query 418 FYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVSDVDQLSL 477 FYR D SR+RASGG+GLGLSIV SLV AHGGA+TV + +GEG FRV LP + + + Sbjct 466 FYRPDGSRSRASGGSGLGLSIVQSLVKAHGGAITVDSTVGEGTTFRVQLPVAPEDSREQI 525 Query 478 TP 479 +P Sbjct 526 SP 527 >gi|334564078|ref|ZP_08517069.1| two-component system sensor kinase [Corynebacterium bovis DSM 20582] Length=481 Score = 365 bits (938), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 230/478 (49%), Positives = 291/478 (61%), Gaps = 23/478 (4%) Query 8 RLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITL---PL 64 RLPLRV LV +L GL+ SG VT + + SRID L WA T P Sbjct 4 RLPLRVSLVLVITVLGGLGLLVSGGVVTGTMNRFMVSRIDDQLTLATGSWAHTTALGEPA 63 Query 65 APDPYPGHN----PDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVG-------- 112 +PD ++ P RPPS F V VI+ G+ Y+ N ++ ++ + +D G Sbjct 64 SPDDMGSYDSRVGPTRPPSEFVV-VIAVGGEFYSV---NGSMASLNSIHDSGPELAGLDE 119 Query 113 -RHPTTLPSIGGS--KTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVL 169 P T+P+ GS WRA SVR DG +T VA+ LA T+R L++LQ+ IGS VL Sbjct 120 PTRPVTVPARAGSADDADWRAASVRNGDGSVTIVALPLASEEHTIRQLIILQMLIGSIVL 179 Query 170 VVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQI 229 V VA +VRR+LRPL E E TA I GQLD+RVP W PRTEVGRL++ALN MLAQI Sbjct 180 VSLVVASLYLVRRALRPLHEVEYTAQRIAQGQLDQRVPAWSPRTEVGRLAVALNRMLAQI 239 Query 230 QRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSR 289 Q + + +S +AR +E MR+FI DASHELRTPLT++RG+AELY GA D M++ R Sbjct 240 QGSFIAVGASERQARQAESAMRRFIGDASHELRTPLTSVRGYAELYTSGATDDANMVVGR 299 Query 290 IESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLD 349 I EA RM LLV+DL+ L R+D RPL +VD+L L ARA P RI++ + Sbjct 300 IADEAGRMSLLVEDLMALVRMDEGRPLRREKVDMLELCLHVVESARAGFPGHRISVRN-N 358 Query 350 GPGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQE 409 G P V GD RL QV+ NLV NA++H VTV + T +EVADDG G++ E Sbjct 359 AEGVPVVTGDPDRLHQVVGNLVTNAVRHGGPGTTVTVTLSTGDGQVFVEVADDGRGIAPE 418 Query 410 DALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLP 467 D +FERFYRAD SR+RASGG+GLGLSIV LV AHGG V+VT+ +GEG F V LP Sbjct 419 DLPHLFERFYRADVSRSRASGGSGLGLSIVKGLVEAHGGDVSVTSTVGEGTTFVVRLP 476 >gi|54022512|ref|YP_116754.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] gi|54014020|dbj|BAD55390.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] Length=511 Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 248/474 (53%), Positives = 301/474 (64%), Gaps = 15/474 (3%) Query 4 HLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLP 63 H G +PLRV LV A ++ GL+ SG VTS L+ L +R D+ L + ++ Sbjct 27 HRLGAVPLRVTLVLALVVFAGLGLLVSGTVVTSALEKSLLARTDQQLRDAVTTRPRVRPT 86 Query 64 LAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVP--ANNDVGRHPTTLPSI 121 + P +P PPS FY+ S G L + A P + VG P T+ S+ Sbjct 87 VP---PPATDPRTPPSPFYIVSESTSGAGTLVLRPFN-VDAAPDLSGTPVG-EPVTVDSV 141 Query 122 GGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVR 181 G + WR ++V + D TT+A+ + TV+ LV+LQV +G AVL V +A Y V+R Sbjct 142 GDAPVRWRVLTVVSGDDR-TTIALPMTQNEETVQRLVMLQVVVGLAVLAVLALAAYFVIR 200 Query 182 RSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAE 241 RSLRPL E AAAI G L RRVP TEV RLS +LNGMLAQIQ A A+ E+S Sbjct 201 RSLRPLRRVENIAAAIARGDLFRRVPVRGTNTEVDRLSRSLNGMLAQIQSAFAATEASEA 260 Query 242 KARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLV 301 AR+SE RMR+F+ DASHELRTPLTTIRGFAELYRQGA D M + RIE EA RMGLLV Sbjct 261 AARESEARMRRFVADASHELRTPLTTIRGFAELYRQGATTDPAMFMDRIEHEARRMGLLV 320 Query 302 DDLLLLARLDAHRPLELCRVDLLALASD-------AAHDARAMDPKRRITLEVLDGPGTP 354 +DLL+LARLDA RPLE+ VDLL +A D A A P+RRI L+V G GT Sbjct 321 EDLLMLARLDAQRPLEIGTVDLLTVAGDAVHNARAVAAAADPAGPRRRIELDVHAGTGTL 380 Query 355 EVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRV 414 EV GDE RLRQVL NL+ NA+ HTP A VTVR+ E D+ IL VAD GPG++ E A RV Sbjct 381 EVPGDEDRLRQVLANLLNNALTHTPPDAAVTVRLTPEPDEVILAVADTGPGLTPEAAERV 440 Query 415 FERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 FERFYR D SRARASGG+GLGLSIV +LV AHGG+V+V +A G G F V LPR Sbjct 441 FERFYRTDVSRARASGGSGLGLSIVQALVVAHGGSVSVDSAPGAGATFTVRLPR 494 >gi|284993023|ref|YP_003411577.1| integral membrane sensor signal transduction histidine kinase [Geodermatophilus obscurus DSM 43160] gi|284066268|gb|ADB77206.1| integral membrane sensor signal transduction histidine kinase [Geodermatophilus obscurus DSM 43160] Length=522 Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 239/499 (48%), Positives = 295/499 (60%), Gaps = 51/499 (10%) Query 8 RLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLE-----EAQIWAQITL 62 R PLR+ LVA + LV L A+GIA TS+L+ + + DR L+ + Q W Sbjct 21 RFPLRITLVALLMGLVVIALTATGIAATSLLKRYVVEQQDRQLVSTLARYQDQPWVGEAC 80 Query 63 PLAPDPYP-GHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVGR-------- 113 P+P G P S FYV +S G+ A AVP + GR Sbjct 81 E-GGSPWPRGGGPQY--STFYVACLSSSGR--------IADLAVPLEAETGRVTFSGRNA 129 Query 114 --------HPTTLPSIGGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIG 165 P T+ S G LWR +S + VA D+ + LV +Q+ +G Sbjct 130 EVVWAGIGRPVTMRSDEGR--LWRLLSEDVGNRNTVVVASDIEADGQIIGQLVRIQMVVG 187 Query 166 SAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGM 225 VL V G A Y +VR SLRPL E E+TAAAI AG L +RVP RTEVGRL+ ALNGM Sbjct 188 LVVLTVLGAAAYVLVRNSLRPLTEVERTAAAIAAGDLSQRVPAGDDRTEVGRLATALNGM 247 Query 226 LAQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAA---RD 282 L++I+ + ++S E+AR SE RMR+F+ DASHELRTPLT+IRGFAELYRQGA + Sbjct 248 LSRIEYGFRAQQASEEQARASETRMRRFVADASHELRTPLTSIRGFAELYRQGAVGSPEE 307 Query 283 VGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRR 342 L+ RIESE +RMG+LV+DLL LARLD RPL + VDL +A DA HDARA+ P R Sbjct 308 TARLMQRIESEGARMGVLVEDLLQLARLDQQRPLTITPVDLAEVAGDAVHDARALQPDRP 367 Query 343 ITLEVLDG-PGTPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDA------ 395 +TL + + P VLGDE+RLRQVL NLV NA+ HTP +A VTV V E Sbjct 368 LTLHLDESLSEVPVVLGDEARLRQVLGNLVTNALVHTPPTAPVTVTVSDEPAAGDGPADG 427 Query 396 ------ILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGA 449 +L VAD+GPGM+ EDA RVFERFYRAD SRAR +GGTGLGL+IV +LVAAH G Sbjct 428 DDGGVVVLRVADEGPGMAPEDAARVFERFYRADPSRARTAGGTGLGLAIVSALVAAHRGT 487 Query 450 VTVTTALGEGCCFRVSLPR 468 V + TA G G F V LPR Sbjct 488 VHLDTAPGRGAVFTVRLPR 506 >gi|260578370|ref|ZP_05846284.1| sensor histidine kinase [Corynebacterium jeikeium ATCC 43734] gi|258603392|gb|EEW16655.1| sensor histidine kinase [Corynebacterium jeikeium ATCC 43734] Length=486 Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust. Identities = 219/488 (45%), Positives = 281/488 (58%), Gaps = 42/488 (8%) Query 21 ILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQIT------------------- 61 +LVA GL SG++VT+ LQ L R+D L + WA + Sbjct 6 VLVAMGLTVSGVSVTTTLQRFLIQRVDEQLDQATNGWAHRSGLAEGNSEDQNAQSGSDST 65 Query 62 ---------LPLAPDPYPGHNPDRPPSRFYVRVISPDGQSYTALNDNTAIPAVPANNDVG 112 L L P P RPPS FY+ V+ D SY N + + A P +G Sbjct 66 ALGLEGFGVLNLQQPPNPVTGVTRPPSDFYILVVD-DQVSYEYFN--SPLKARPEIRGLG 122 Query 113 RHPTTLPSIGGSK------TLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGS 166 T+P GS+ WRA S R DG +T VA+ LA+ + LVLLQ IG Sbjct 123 N--PTMPVTVGSREDSEPHISWRATSFRNDDGTITIVALPLAEEEHIISRLVLLQAVIGL 180 Query 167 AVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGML 226 V+ +A +VRR+LRPL E E TA+ I G L +RVP W P TEVGRLS ALN ML Sbjct 181 TVVAFVILASMYLVRRALRPLNEVELTASKISNGDLGQRVPNWRPNTEVGRLSQALNKML 240 Query 227 AQIQRAVASAESSAEKARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGML 286 AQIQ A + +S +AR SE MR+FI DASHELRTPLT++RG+AELY+ GA D M+ Sbjct 241 AQIQTAFVAIGASERQARRSEASMRRFIGDASHELRTPLTSVRGYAELYQSGATDDAPMV 300 Query 287 LSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLE 346 + RI EA RM LLV+DLL L R+D RPL RVD+L L + A ARA P R T++ Sbjct 301 IDRISEEAGRMSLLVEDLLALVRMDEGRPLAKNRVDMLELVLETAESARAGFPNR--TVQ 358 Query 347 VLDGPG-TPEVLGDESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPG 405 V++ G P V+GD +RL QVL NLV NA++H E A+V +R+ I++V D+G G Sbjct 359 VVNETGDVPIVIGDVNRLHQVLGNLVTNALRHAGEDAEVKLRLDKRDGHVIVDVEDNGRG 418 Query 406 MSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVS 465 + ED +FERFYR D SR+RASGG+GLGLSIV LV AHGG V+V + G+G FR+ Sbjct 419 IPAEDVPHLFERFYRPDVSRSRASGGSGLGLSIVKGLVEAHGGTVSVDSEEGQGTRFRID 478 Query 466 LPRVSDVD 473 LP + + Sbjct 479 LPEAPEAE 486 >gi|343925789|ref|ZP_08765304.1| two-component histidine kinase PhoR [Gordonia alkanivorans NBRC 16433] gi|343764140|dbj|GAA12230.1| two-component histidine kinase PhoR [Gordonia alkanivorans NBRC 16433] Length=480 Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 235/474 (50%), Positives = 290/474 (62%), Gaps = 16/474 (3%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR+ LVA TL LV GL+ASG+AVTS ++ L SR D L+ + WA P Sbjct 11 VPLRLSLVALTLALVVVGLLASGVAVTSSMRQDLISRTDEGLVNATRTWADPRSPANDPR 70 Query 69 YPGHNPDRPPSRFYVRVI--SPDGQS----YTALNDNTAIPAVPANNDVGRHPTTLPSIG 122 P RPPS +YV P G S Y + + V +N VG P T+ S+ Sbjct 71 PGPPGPRRPPSPYYVESTFRGPAGISATNVYNQFDHAPNLDGVTGDN-VG--PVTVGSVE 127 Query 123 GSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRR 182 WR + R++ TTVA + D+ +T+ L+ LQ IG+ V+V+ G+ Y +VR Sbjct 128 PHGPRWRVIK-RSNMFGTTTVATPMTDIDATISRLIWLQFAIGAIVVVLIGLLSYLLVRT 186 Query 183 SLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEK 242 SLRPL E+TA AI AG L RRVP P TEVG LS++LN ML QIQ+A A+ +S + Sbjct 187 SLRPLRRVEETAHAIAAGDLTRRVPLAAPNTEVGSLSVSLNTMLGQIQQAFATTAASERQ 246 Query 243 ARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVD 302 AR SE+ MR+F+ DASHELRTPLT+I+GFAELY QG DV + RI EA RM LLV+ Sbjct 247 ARASEEEMRRFVADASHELRTPLTSIKGFAELYSQGGVSDVSDAMRRINDEAGRMNLLVE 306 Query 303 DLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESR 362 DLL+LARLDA RPL VDLL LA++A AR P+R I LEV G P V GD R Sbjct 307 DLLMLARLDAQRPLATAPVDLLGLAAEAVASARVGAPERDIRLEVTTGDHPPLVSGDGPR 366 Query 363 LRQVLRNLVANAIQHTPESADVTVRVGTEGD-----DAILEVADDGPGMSQEDALRVFER 417 L QVLRNL+ NAI HT A +TV V E D +A+L VAD GPG++ EDA VFER Sbjct 367 LLQVLRNLIGNAINHTSAEASITVGVSVEADSGGTLEAVLRVADTGPGLTAEDAQHVFER 426 Query 418 FYRADSSRAR-ASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPRVS 470 FYR D SR R + GG GLGLSIV +LV AHGG V V + GEG F V LP +S Sbjct 427 FYRGDQSRHRGSGGGNGLGLSIVAALVEAHGGRVGVESTSGEGATFWVRLPLLS 480 >gi|227506356|ref|ZP_03936405.1| sensor kinase [Corynebacterium striatum ATCC 6940] gi|227197007|gb|EEI77055.1| sensor kinase [Corynebacterium striatum ATCC 6940] Length=452 Score = 353 bits (905), Expect = 5e-95, Method: Compositional matrix adjust. Identities = 204/464 (44%), Positives = 288/464 (63%), Gaps = 21/464 (4%) Query 9 LPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPLAPDP 68 +PLR L+ +++ GL S +AV+S++ + + +D L E W + L+ D Sbjct 1 MPLRTWLLVLMVLVSGLGLAGSSLAVSSIMTDVMYANVDEQLKEATNGWVR---NLSNDS 57 Query 69 YPGHNPDRPPSRFYVRVISPDGQS-YTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKTL 127 Y G RPP+ + V PDG YT N ++P + P T+ S+G S+T Sbjct 58 YAGDYSRRPPTEYVVLSYLPDGTILYTG--PNASMPDAKKLY-IDDEPATINSVGDSETK 114 Query 128 WRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPL 187 WRAV+++ +G +T VA DL +R L ++Q+ I + V+ + V G +RR+LRPL Sbjct 115 WRAVAIK-QNGTVTIVAKDLTRETIMLRGLAIVQIIITAVVMGIIAVVGMWFIRRALRPL 173 Query 188 AEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSE 247 E+TA+ I AG LD+RVP W TEVG+LS ALN ML Q+QR+V +A++ E Sbjct 174 RVVEKTASQIAAGDLDKRVPDWPLHTEVGQLSAALNIMLGQLQRSVV-------QAQEKE 226 Query 248 DRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLL 307 ++MR+F+ DASHELRTPLT++RG+ ELYR GA +DV M+ S+I+ E+ RM LLV+DLL L Sbjct 227 EQMRRFVGDASHELRTPLTSLRGYTELYRSGATQDVDMVFSKIDDESKRMSLLVEDLLAL 286 Query 308 ARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVL 367 R + R L++ VD+L L A ARA P R+I + V + P V GD RL QVL Sbjct 287 TRAEGSR-LDMGTVDMLELVLSAGSSARAAFPGRQIDV-VNEAADIPLVKGDPDRLHQVL 344 Query 368 RNLVANAIQHTPESADVTVRV----GTEGDDAILEVADDGPGMSQEDALRVFERFYRADS 423 NLV+NA++H E A V + + G +G D +++VADDG GM+ EDA +FERFYRAD+ Sbjct 345 LNLVSNALRHGGEEAKVKLTIREEAGEKGTDVLIDVADDGKGMAPEDASHIFERFYRADT 404 Query 424 SRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLP 467 SR R +GG+GLGL+IV SLV HGG ++V +ALGEG F + LP Sbjct 405 SRTRDTGGSGLGLAIVKSLVEQHGGRISVESALGEGSTFTLRLP 448 >gi|284031361|ref|YP_003381292.1| histidine kinase [Kribbella flavida DSM 17836] gi|283810654|gb|ADB32493.1| histidine kinase [Kribbella flavida DSM 17836] Length=505 Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 251/507 (50%), Positives = 303/507 (60%), Gaps = 46/507 (9%) Query 3 RHLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITL 62 R L R PLRV +V L LV L+ASG+ T++++ LT R+D AQ+ A + Sbjct 5 RRLTERYPLRVTIVLVLLTLVTAALLASGLVATTIMRGYLTDRVD------AQL-ADASG 57 Query 63 PLAPDPYP---GHNPDRPP---SRFYVRVISPDG----QSYTALNDNTAIPAVPA----- 107 P+A P+ G PD P S FYV+ DG + L + A P +PA Sbjct 58 PIANRPWRSIVGPRPDSGPPLPSAFYVQTFKSDGTGADRFLQPLRSSEAPPRLPALTLAQ 117 Query 108 NNDVGRHPTTLPSIGGSKTLWRAVSV--RASDGYLTTVAIDLADVRSTVRSLVLLQVGIG 165 G P +P++ G T WR V+V R SD VA L D+ T++ LV +Q+ G Sbjct 118 VKSRGNEPFNVPALDGGDT-WRVVAVPLRNSDRGYVMVAQSLGDMNRTLQQLVGVQIAAG 176 Query 166 SAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGM 225 +LV+ G VVRRSLR L + E TA AI G L RRVPQ PRTEVGRLSLALN M Sbjct 177 VILLVLLAGVGTYVVRRSLRGLEDVEHTAVAIAGGDLGRRVPQRDPRTEVGRLSLALNQM 236 Query 226 LAQIQRAVAS---------------------AESSAEKARDSEDRMRQFITDASHELRTP 264 L QI+ A A A+ S E AR SEDRMR+F+ DASHELRTP Sbjct 237 LGQIETAFAQRTASEFAARRSEEAARRSAEIAKRSEEHARQSEDRMRRFVADASHELRTP 296 Query 265 LTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLELCRVDLL 324 LT+IRGFAEL RQ + RIE EA RMGLLVDDLLLLARLD RPL+ VDLL Sbjct 297 LTSIRGFAELSRQRGGSADPATMRRIEEEAKRMGLLVDDLLLLARLDQQRPLQYQPVDLL 356 Query 325 ALASDAAHDARAMDPKRRITLEVLDGPGTPEVLGDESRLRQVLRNLVANAIQHTPESADV 384 LA DA HD A+ P R ++L +L G P V GDE+RLRQVL NLV+NA+ HTP A + Sbjct 357 TLAGDAVHDVHAVQPDRVVSLRILPGSSAPVVEGDEARLRQVLGNLVSNALHHTPAEAAI 416 Query 385 TVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGLSIVDSLVA 444 TV VGT +A+LEVAD G G+S E RVFERFYRADS+R RA+GG+GLGLSIV +LVA Sbjct 417 TVAVGTRDGEAVLEVADRGDGLSDEQKARVFERFYRADSARTRATGGSGLGLSIVAALVA 476 Query 445 AHGGAVTVTTALGEGCCFRVSLPRVSD 471 AH G VTVT G G F V+LP V + Sbjct 477 AHRGRVTVTDTPGGGATFTVTLPLVPN 503 >gi|68535407|ref|YP_250112.1| two-component system sensor kinase TcsS1 [Corynebacterium jeikeium K411] gi|68263006|emb|CAI36494.1| two-component system sensor kinase TcsS1 [Corynebacterium jeikeium K411] Length=536 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 225/511 (45%), Positives = 286/511 (56%), Gaps = 54/511 (10%) Query 4 HLRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQIT-- 61 H PLR+ LV +LVA GL SG++VT+ LQ L R+D L + WA + Sbjct 30 HFLSHYPLRISLVVVIAVLVAMGLTVSGVSVTTTLQRFLIQRVDEQLDQATNGWAHRSGL 89 Query 62 --------------------------------------LPLAPDPYPGHNPDRPPSRFYV 83 L L P P RPPS FY+ Sbjct 90 ADGTNSGTTNGTNSGTTNGESTQGGSESSALGSEGFGVLNLQQPPSPVTGVTRPPSDFYI 149 Query 84 RVISPDGQSYTALNDNTAIPAVPANNDVGRHPTTLPSIGGSKT------LWRAVSVRASD 137 V+ D SY N + + A P +G T+P GS+ WRA S R D Sbjct 150 MVVD-DQISYEYFN--SPLKARPEIRGLGN--PTMPVTVGSREDSEPHISWRATSFRNDD 204 Query 138 GYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVRRSLRPLAEFEQTAAAI 197 G +T VA+ LA+ + LVLLQ IG V+ +A +VRR+LRPL E E TA+ I Sbjct 205 GTITIVALPLAEEEHIISRLVLLQAVIGLTVVAFVILASMYLVRRALRPLNEVELTASKI 264 Query 198 GAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAEKARDSEDRMRQFITDA 257 G L +RVP W P TEVGRLS ALN MLAQIQ A + +S +AR SE MR+FI DA Sbjct 265 SNGDLGQRVPNWRPNTEVGRLSQALNKMLAQIQTAFVAIGASERQARRSEASMRRFIGDA 324 Query 258 SHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLVDDLLLLARLDAHRPLE 317 SHELRTPLT++RG+AELY+ GA D M++ RI EA RM LLV+DLL L R+D RPL Sbjct 325 SHELRTPLTSVRGYAELYQSGATDDAPMVIDRISEEAGRMSLLVEDLLALVRMDEGRPLA 384 Query 318 LCRVDLLALASDAAHDARAMDPKRRITLEVLDGPG-TPEVLGDESRLRQVLRNLVANAIQ 376 RVD+L L + A ARA P R T++V++ G P V+GD +RL QVL NLV NA++ Sbjct 385 KNRVDMLELVLETAESARAGFPNR--TVQVVNETGDVPIVIGDVNRLHQVLGNLVTNALR 442 Query 377 HTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFYRADSSRARASGGTGLGL 436 H E A+V +R+ I++V D+G G+ ED +FERFYR D SR+RASGG+GLGL Sbjct 443 HAGEDAEVKLRLDKRDGHVIVDVEDNGRGIPAEDVPHLFERFYRPDVSRSRASGGSGLGL 502 Query 437 SIVDSLVAAHGGAVTVTTALGEGCCFRVSLP 467 SIV LV AHGG V+V + G+G FR+ LP Sbjct 503 SIVKGLVEAHGGTVSVDSEEGQGTRFRIDLP 533 >gi|296141304|ref|YP_003648547.1| integral membrane sensor signal transduction histidine kinase [Tsukamurella paurometabola DSM 20162] gi|296029438|gb|ADG80208.1| integral membrane sensor signal transduction histidine kinase [Tsukamurella paurometabola DSM 20162] Length=468 Score = 349 bits (896), Expect = 5e-94, Method: Compositional matrix adjust. Identities = 235/469 (51%), Positives = 296/469 (64%), Gaps = 12/469 (2%) Query 5 LRGRLPLRVRLVAATLILVATGLVASGIAVTSMLQHRLTSRIDRVLLEEAQIWAQITLPL 64 L R+PLR LVA + LV GL+ SG A+T+ ++ +L +R D+ L + A WA+ Sbjct 7 LAARIPLRFSLVAVVVGLVFLGLLVSGAALTAAMKDQLIAREDQALRQAADTWAR----- 61 Query 65 APDPYPGHNPDR--PPSRFYVRVISPDGQSYTALN-DNTAIPAVPANNDVGRHPTTLPSI 121 P P P R PP+RF+ PDG N D T P + +D+G T+ S+ Sbjct 62 -PKPRNFPEPPRGGPPTRFFQATFLPDGSQLQISNPDFTDKPDLTGIDDLGGDAVTVDSV 120 Query 122 GGSKTLWRAVSVRASDGYLTTVAIDLADVRSTVRSLVLLQVGIGSAVLVVPGVAGYAVVR 181 WR V + G +T VA+ L +V ST+ +LV+L++ IG VL + G GY VVR Sbjct 121 RKDGPQWRVVQSHSQFG-VTFVAVTLTEVNSTLNTLVVLELLIGGGVLTIAGGVGYLVVR 179 Query 182 RSLRPLAEFEQTAAAIGAGQLDRRVPQWHPRTEVGRLSLALNGMLAQIQRAVASAESSAE 241 RSLRPL + E TA AI AG L RRVP P TEVGRL+ +LN ML Q+Q + +S E Sbjct 180 RSLRPLEQVEATAEAIAAGDLTRRVPDAPPNTEVGRLAASLNTMLHQVQDSFGQVAASEE 239 Query 242 KARDSEDRMRQFITDASHELRTPLTTIRGFAELYRQGAARDVGMLLSRIESEASRMGLLV 301 +AR E+RMR+F+ DASHELRTPLT+IRGFAELYRQGA+ D+ L+ IESEA RMGLLV Sbjct 240 RARADEERMRRFVGDASHELRTPLTSIRGFAELYRQGASGDIDFLMCHIESEAQRMGLLV 299 Query 302 DDLLLLARLDAHRPLELCRVDLLALASDAAHDARAMDPKRRITLEV--LDGPGTPEVLGD 359 +DLLLLARLDA RPL VDL +A D H A+A +P R I +E+ D G V GD Sbjct 300 EDLLLLARLDARRPLASEPVDLADVAGDVVHAAQAREPGRDIDIEIAGADPAGAVTVRGD 359 Query 360 ESRLRQVLRNLVANAIQHTPESADVTVRVGTEGDDAILEVADDGPGMSQEDALRVFERFY 419 RL QV+ NLV+NA++HTP+ A V VR+ + A ++VAD GPGM +A RVFERFY Sbjct 360 RDRLHQVVTNLVSNALRHTPDDAAVRVRIAADDACAQVQVADTGPGMEPGEASRVFERFY 419 Query 420 RADSSRARASGGTGLGLSIVDSLVAAHGGAVTVTTALGEGCCFRVSLPR 468 R DSSR+R SGG GLGLSIV +V HGG V V TA G G F V LPR Sbjct 420 RTDSSRSRGSGGAGLGLSIVHGIVDRHGGTVAVDTAPGAGATFTVRLPR 468 Lambda K H 0.319 0.135 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1032141390236 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40