BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0762c Length=181 Score E Sequences producing significant alignments: (Bits) Value gi|15607902|ref|NP_215276.1| hypothetical protein Rv0762c [Mycob... 369 1e-100 gi|340625781|ref|YP_004744233.1| hypothetical protein MCAN_07661... 366 7e-100 gi|169628305|ref|YP_001701954.1| hypothetical protein MAB_1212c ... 293 9e-78 gi|333992246|ref|YP_004524860.1| hypothetical protein JDM601_360... 275 2e-72 gi|183984902|ref|YP_001853193.1| hypothetical protein MMAR_4934 ... 272 1e-71 gi|118616313|ref|YP_904645.1| hypothetical protein MUL_0471 [Myc... 268 3e-70 gi|240171676|ref|ZP_04750335.1| hypothetical protein MkanA1_2034... 260 5e-68 gi|342862196|ref|ZP_08718838.1| hypothetical protein MCOL_25021 ... 259 9e-68 gi|118463449|ref|YP_879982.1| hypothetical protein MAV_0706 [Myc... 256 1e-66 gi|118470264|ref|YP_890092.1| hypothetical protein MSMEG_5865 [M... 255 2e-66 gi|41406694|ref|NP_959530.1| hypothetical protein MAP0596c [Myco... 254 3e-66 gi|108801547|ref|YP_641744.1| hypothetical protein Mmcs_4584 [My... 253 8e-66 gi|296166492|ref|ZP_06848923.1| conserved hypothetical protein [... 253 1e-65 gi|254818461|ref|ZP_05223462.1| hypothetical protein MintA_00972... 253 1e-65 gi|145222186|ref|YP_001132864.1| hypothetical protein Mflv_1594 ... 246 7e-64 gi|312138817|ref|YP_004006153.1| hypothetical protein REQ_13840 ... 243 9e-63 gi|120406111|ref|YP_955940.1| hypothetical protein Mvan_5163 [My... 241 3e-62 gi|54024553|ref|YP_118795.1| hypothetical protein nfa25840 [Noca... 234 5e-60 gi|226306862|ref|YP_002766822.1| hypothetical protein RER_33750 ... 234 6e-60 gi|229492764|ref|ZP_04386565.1| conserved hypothetical protein [... 231 2e-59 gi|111021645|ref|YP_704617.1| hypothetical protein RHA1_ro04673 ... 230 5e-59 gi|226364182|ref|YP_002781964.1| hypothetical protein ROP_47720 ... 227 5e-58 gi|262203704|ref|YP_003274912.1| hypothetical protein Gbro_3841 ... 218 2e-55 gi|326384236|ref|ZP_08205918.1| hypothetical protein SCNU_14931 ... 216 2e-54 gi|343927845|ref|ZP_08767313.1| hypothetical protein GOALK_097_0... 211 3e-53 gi|319950410|ref|ZP_08024326.1| hypothetical protein ES5_12555 [... 192 2e-47 gi|53802647|ref|YP_112650.1| hypothetical protein MCA0111 [Methy... 189 1e-46 gi|304310753|ref|YP_003810351.1| hypothetical protein HDN1F_1111... 187 8e-46 gi|326331687|ref|ZP_08197975.1| hypothetical protein NBCG_03126 ... 159 2e-37 gi|146275955|ref|YP_001166115.1| hypothetical protein Saro_3730 ... 76.6 1e-12 gi|148554969|ref|YP_001262551.1| hypothetical protein Swit_2054 ... 67.8 6e-10 gi|254481976|ref|ZP_05095218.1| hypothetical protein GPB2148_47 ... 48.1 6e-04 gi|16330207|ref|NP_440935.1| hypothetical protein slr0887 [Synec... 40.4 0.12 gi|294141009|ref|YP_003556987.1| secretion system apparatus prot... 40.0 0.16 gi|148554967|ref|YP_001262549.1| hypothetical protein Swit_2052 ... 39.3 0.28 gi|315041084|ref|XP_003169919.1| hypothetical protein MGYG_08093... 38.9 0.29 gi|169630047|ref|YP_001703696.1| hypothetical protein MAB_2964 [... 38.9 0.30 gi|326471194|gb|EGD95203.1| mandelate racemase/muconate lactoniz... 37.7 0.65 gi|296812985|ref|XP_002846830.1| mandelate racemase/muconate lac... 37.4 0.98 gi|302661191|ref|XP_003022265.1| hypothetical protein TRV_03587 ... 36.6 1.5 gi|50554719|ref|XP_504768.1| YALI0E34331p [Yarrowia lipolytica] ... 36.2 1.9 gi|325676469|ref|ZP_08156147.1| hypothetical protein HMPREF0724_... 36.2 2.1 gi|312138831|ref|YP_004006167.1| hypothetical protein REQ_13980 ... 36.2 2.2 gi|111022887|ref|YP_705859.1| hypothetical protein RHA1_ro05924 ... 35.8 2.5 gi|254490817|ref|ZP_05104000.1| hypothetical protein MDMS009_115... 35.8 2.8 gi|225548065|ref|ZP_03769350.1| hypothetical protein RUMHYD_0004... 35.4 3.7 gi|226307687|ref|YP_002767647.1| hypothetical protein RER_42000 ... 35.4 3.8 gi|229493870|ref|ZP_04387642.1| conserved hypothetical protein [... 35.4 3.9 gi|134298531|ref|YP_001112027.1| putative PAS/PAC sensor protein... 35.0 4.9 gi|169629016|ref|YP_001702665.1| hypothetical protein MAB_1928c ... 35.0 5.3 >gi|15607902|ref|NP_215276.1| hypothetical protein Rv0762c [Mycobacterium tuberculosis H37Rv] gi|15840177|ref|NP_335214.1| hypothetical protein MT0787 [Mycobacterium tuberculosis CDC1551] gi|31791950|ref|NP_854443.1| hypothetical protein Mb0785c [Mycobacterium bovis AF2122/97] 78 more sequence titles Length=181 Score = 369 bits (947), Expect = 1e-100, Method: Compositional matrix adjust. Identities = 180/181 (99%), Positives = 181/181 (100%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +AGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI Sbjct 1 MAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA Sbjct 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL Sbjct 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 Query 181 W 181 W Sbjct 181 W 181 >gi|340625781|ref|YP_004744233.1| hypothetical protein MCAN_07661 [Mycobacterium canettii CIPT 140010059] gi|340003971|emb|CCC43106.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=181 Score = 366 bits (940), Expect = 7e-100, Method: Compositional matrix adjust. Identities = 178/181 (99%), Positives = 181/181 (100%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +AGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI Sbjct 1 MAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA Sbjct 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 GGGKWNWQRDFFDFGHVSALYLEL+KAGKLSPGMQKRIERAVSG+KVPGYYPLGKTPVPL Sbjct 121 GGGKWNWQRDFFDFGHVSALYLELLKAGKLSPGMQKRIERAVSGDKVPGYYPLGKTPVPL 180 Query 181 W 181 W Sbjct 181 W 181 >gi|169628305|ref|YP_001701954.1| hypothetical protein MAB_1212c [Mycobacterium abscessus ATCC 19977] gi|169240272|emb|CAM61300.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=185 Score = 293 bits (749), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 140/182 (77%), Positives = 158/182 (87%), Gaps = 4/182 (2%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDI 63 +PR EL+DVV WLQAN AE+ GDW LA FYTDDATYGWN+GP EDVMCVGIDEIRDI Sbjct 4 FPRQELDDVVADWLQANLDAEKAGDWKPLARFYTDDATYGWNIGPKEDVMCVGIDEIRDI 63 Query 64 ALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVAT----DANGAEQEVYGIGGSWFRY 119 ALGQEM+GL+GW YPYQ+V++D+KQGEV+GFWKQV T +A G + VYGIGGSWFRY Sbjct 64 ALGQEMEGLEGWTYPYQKVIVDDKQGEVIGFWKQVVTGGNDEAGGDDLSVYGIGGSWFRY 123 Query 120 AGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVP 179 AG G+WNWQRDFFDFGHVSALY++LIKAGKLS GMQKRI+R +SG KVPGYYPLGKTPVP Sbjct 124 AGNGQWNWQRDFFDFGHVSALYMDLIKAGKLSEGMQKRIQRGLSGEKVPGYYPLGKTPVP 183 Query 180 LW 181 LW Sbjct 184 LW 185 >gi|333992246|ref|YP_004524860.1| hypothetical protein JDM601_3606 [Mycobacterium sp. JDM601] gi|333488214|gb|AEF37606.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=184 Score = 275 bits (702), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 129/184 (71%), Positives = 153/184 (84%), Gaps = 3/184 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + +PR++LED V RWLQANR AE GDW LADF+ DDATYGWN+GP EDV+CVGIDEI Sbjct 1 MPSFPREQLEDWVERWLQANREAEAAGDWRPLADFFADDATYGWNIGPKEDVICVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALG EM+GL W+YPYQ+V+ID+KQGE+VGFWKQVATD++G E E+YGIGGSWFR Sbjct 61 RDIALGLEMEGLDNWQYPYQKVIIDDKQGEIVGFWKQVATDSDGVESEIYGIGGSWFRLT 120 Query 121 GGGKW---NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTP 177 G WQRDFFDFGHV LYL+L+ AGKLS GMQKRIER+++G K+PGYYPLG++P Sbjct 121 EKGGLPLIEWQRDFFDFGHVQKLYLDLMTAGKLSKGMQKRIERSLAGEKLPGYYPLGQSP 180 Query 178 VPLW 181 VPLW Sbjct 181 VPLW 184 >gi|183984902|ref|YP_001853193.1| hypothetical protein MMAR_4934 [Mycobacterium marinum M] gi|183178228|gb|ACC43338.1| conserved hypothetical protein [Mycobacterium marinum M] Length=181 Score = 272 bits (696), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 126/181 (70%), Positives = 148/181 (82%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +A + R ELE V WLQANR E GDW LADFY DATYGWN+GP EDVMCVGIDEI Sbjct 1 MASFERSELEQWVQSWLQANRDCEAAGDWKPLADFYAPDATYGWNIGPKEDVMCVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RD+ALG EM+GLQ W+YPYQ+V+ID++QGE+VGFWKQV TD +G QE+YGIGGSWFR Sbjct 61 RDVALGYEMEGLQNWQYPYQKVIIDDRQGEIVGFWKQVVTDGDGGRQEIYGIGGSWFRLN 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 WQRDFFDFGHV ALYL+L+KAGKLS GMQ+RIER+++G ++PGYYPLGKTPVP+ Sbjct 121 ADKLIEWQRDFFDFGHVQALYLDLMKAGKLSAGMQRRIERSLAGERLPGYYPLGKTPVPI 180 Query 181 W 181 W Sbjct 181 W 181 >gi|118616313|ref|YP_904645.1| hypothetical protein MUL_0471 [Mycobacterium ulcerans Agy99] gi|118568423|gb|ABL03174.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=181 Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 124/181 (69%), Positives = 147/181 (82%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +A + R E+E V WLQANR E GDW LADFY DATYGWN+GP EDVMCVGIDEI Sbjct 1 MASFERSEVEQWVQSWLQANRDCEAAGDWKPLADFYAPDATYGWNIGPKEDVMCVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RD+ALG EM+GLQ W+YPYQ+V+ID++QGE+VGFWKQV TD +G QE+YGIGGSWFR Sbjct 61 RDVALGYEMEGLQNWQYPYQKVIIDDRQGEIVGFWKQVVTDGDGGRQEIYGIGGSWFRLN 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 WQRDFFDFGHV ALYL+L+KAGKLS GMQ+RIE +++G ++PGYYPLGKTPVP+ Sbjct 121 ADKLIEWQRDFFDFGHVQALYLDLMKAGKLSAGMQRRIEGSLAGERLPGYYPLGKTPVPI 180 Query 181 W 181 W Sbjct 181 W 181 >gi|240171676|ref|ZP_04750335.1| hypothetical protein MkanA1_20348 [Mycobacterium kansasii ATCC 12478] Length=181 Score = 260 bits (665), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 121/181 (67%), Positives = 145/181 (81%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + + R EL++ V WL+AN E+ GDWT LA FY DATYGWN+GP EDVMCVGIDEI Sbjct 1 MVSFERAELDEWVQSWLRANEDCEKAGDWTPLAGFYAADATYGWNIGPKEDVMCVGIDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALG EM GLQ W+YPYQ+V++D++QGE+VGFWKQV DA+G QEVYGIGGSWFR Sbjct 61 RDIALGLEMQGLQDWQYPYQKVIVDDRQGEIVGFWKQVVVDADGGRQEVYGIGGSWFRLN 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 WQRDFFDFGHVSALY++L+K G+LS GM+KRI+R +SG K+PGYYPLG+ PVPL Sbjct 121 ADKLIEWQRDFFDFGHVSALYMQLMKNGELSEGMRKRIDRGLSGEKMPGYYPLGQAPVPL 180 Query 181 W 181 W Sbjct 181 W 181 >gi|342862196|ref|ZP_08718838.1| hypothetical protein MCOL_25021 [Mycobacterium colombiense CECT 3035] gi|342130274|gb|EGT83594.1| hypothetical protein MCOL_25021 [Mycobacterium colombiense CECT 3035] Length=181 Score = 259 bits (663), Expect = 9e-68, Method: Compositional matrix adjust. Identities = 118/181 (66%), Positives = 148/181 (82%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +A + R++LE V RWLQAN+ E+ GDW LADFYT DATYGWN+GP EDVMCVG+DEI Sbjct 1 MASHSREDLEAWVDRWLQANKDCEKAGDWRPLADFYTQDATYGWNIGPKEDVMCVGVDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RD+ALG EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+ A+G + E+YGIGGSWFR Sbjct 61 RDVALGLEMEGLENWVYEYQKVLIDEKQGEIVGFWKQIVNKADGTQDEIYGIGGSWFRLN 120 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 G K WQRDFFDFGHV+ ++ +LI++G LS GMQKRIER+++G K+PGYYPLG+ PVP+ Sbjct 121 GDQKIEWQRDFFDFGHVAYMFGKLIESGDLSEGMQKRIERSIAGEKLPGYYPLGEAPVPI 180 Query 181 W 181 W Sbjct 181 W 181 >gi|118463449|ref|YP_879982.1| hypothetical protein MAV_0706 [Mycobacterium avium 104] gi|254773645|ref|ZP_05215161.1| hypothetical protein MaviaA2_03070 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164736|gb|ABK65633.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458358|gb|EGO37336.1| hypothetical protein MAPs_13830 [Mycobacterium avium subsp. paratuberculosis S397] Length=182 Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 118/181 (66%), Positives = 143/181 (80%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 A R+ELE V RWLQAN+ E+ GDW LADFY DATYGWN+GP EDVMCVG+DEI Sbjct 2 TATASREELEAWVDRWLQANKDCEKAGDWRPLADFYAKDATYGWNIGPKEDVMCVGVDEI 61 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALG EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+ A+G + E+YGIGGSWFR Sbjct 62 RDIALGLEMEGLENWVYEYQKVLIDEKQGEIVGFWKQIVNKADGTQDEIYGIGGSWFRLN 121 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 WQRDFFDFGHV+ ++ +LI++G LS GMQKRIER+V+G K+PGYYPLG+ PVP+ Sbjct 122 SDNLIEWQRDFFDFGHVAKMFGKLIESGDLSAGMQKRIERSVAGEKLPGYYPLGQAPVPI 181 Query 181 W 181 W Sbjct 182 W 182 >gi|118470264|ref|YP_890092.1| hypothetical protein MSMEG_5865 [Mycobacterium smegmatis str. MC2 155] gi|118171551|gb|ABK72447.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=179 Score = 255 bits (652), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 117/176 (67%), Positives = 144/176 (82%), Gaps = 0/176 (0%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R++LED V RWL ANR AE+ GDW LADFYT+DATYGWN+GP EDVMCVG DEIRD+AL Sbjct 4 REQLEDWVDRWLTANREAEKAGDWKPLADFYTEDATYGWNIGPKEDVMCVGRDEIRDVAL 63 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKW 125 G EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+A ++G+ E+YGIGGSWFR Sbjct 64 GLEMEGLENWVYEYQKVIIDEKQGEIVGFWKQIANKSDGSRAEIYGIGGSWFRLDDQLLI 123 Query 126 NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 WQRDFFDFGHV+ Y +LI++G L+P MQKRIER++SG K+PGYYP+G +PVP+W Sbjct 124 EWQRDFFDFGHVAKGYAKLIESGDLTPAMQKRIERSLSGEKLPGYYPIGTSPVPIW 179 >gi|41406694|ref|NP_959530.1| hypothetical protein MAP0596c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395044|gb|AAS02913.1| hypothetical protein MAP_0596c [Mycobacterium avium subsp. paratuberculosis K-10] Length=182 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 118/181 (66%), Positives = 142/181 (79%), Gaps = 0/181 (0%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 A R+ELE V RWLQAN+ E+ GDW LADFY DATYGWN+GP EDVMCVG+DEI Sbjct 2 TATASREELEAWVDRWLQANKDCEKAGDWRPLADFYAKDATYGWNIGPKEDVMCVGVDEI 61 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RDIALG EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+ A+G + E+YGIGGSWFR Sbjct 62 RDIALGLEMEGLENWVYEYQKVLIDEKQGEIVGFWKQIVNKADGTQDEIYGIGGSWFRLN 121 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 WQRDFFDFGHV+ ++ +LI++G LS GMQKRIER+V+G K PGYYPLG+ PVP+ Sbjct 122 SDNLIEWQRDFFDFGHVAKMFGKLIESGDLSAGMQKRIERSVAGEKPPGYYPLGQAPVPI 181 Query 181 W 181 W Sbjct 182 W 182 >gi|108801547|ref|YP_641744.1| hypothetical protein Mmcs_4584 [Mycobacterium sp. MCS] gi|119870701|ref|YP_940653.1| hypothetical protein Mkms_4672 [Mycobacterium sp. KMS] gi|126437532|ref|YP_001073223.1| hypothetical protein Mjls_4967 [Mycobacterium sp. JLS] gi|108771966|gb|ABG10688.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696790|gb|ABL93863.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237332|gb|ABO00733.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=192 Score = 253 bits (646), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 117/186 (63%), Positives = 145/186 (78%), Gaps = 5/186 (2%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + R+ELE V RWLQANR AE+ GDW LADFYTDDATYGWN+GP EDVMC+G +EI Sbjct 7 TSSSKREELEQWVERWLQANRDAEKAGDWKPLADFYTDDATYGWNIGPKEDVMCIGKEEI 66 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYA 120 RD+ALG EM+GL+ W Y YQ+V+IDEKQ E+VGFWKQ+ ++G + E+YGIGGSWFR A Sbjct 67 RDVALGLEMEGLENWVYEYQKVLIDEKQNEIVGFWKQIVNKSDGTQDEIYGIGGSWFRLA 126 Query 121 GGGK-----WNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGK 175 G+ WQRDFFDFGHV+ Y +LI++G L+P MQKRIER++SG K+PGYYPLG+ Sbjct 127 AVGEDESLLIEWQRDFFDFGHVAKGYAKLIESGDLTPTMQKRIERSLSGEKLPGYYPLGE 186 Query 176 TPVPLW 181 P P+W Sbjct 187 APAPIW 192 >gi|296166492|ref|ZP_06848923.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898104|gb|EFG77679.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=179 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 114/176 (65%), Positives = 141/176 (81%), Gaps = 0/176 (0%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R+ELE V RWLQAN+ E+ GDW LADFY DATYGWN+GP EDVMCVG+DEIRDIAL Sbjct 4 REELEAWVDRWLQANKDCEKAGDWRPLADFYARDATYGWNIGPKEDVMCVGVDEIRDIAL 63 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKW 125 G EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+ ++G + E+YGIGGSWFR Sbjct 64 GLEMEGLENWVYEYQKVLIDEKQGEIVGFWKQIVNKSDGTQDEIYGIGGSWFRLNADNLI 123 Query 126 NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 WQRDFFDFGHV+ ++ LI++G LS GMQ+RIER+++G K+PGYYPLG+ PVP+W Sbjct 124 EWQRDFFDFGHVAKMFATLIESGDLSAGMQRRIERSIAGEKLPGYYPLGQAPVPIW 179 >gi|254818461|ref|ZP_05223462.1| hypothetical protein MintA_00972 [Mycobacterium intracellulare ATCC 13950] Length=179 Score = 253 bits (645), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 117/176 (67%), Positives = 143/176 (82%), Gaps = 0/176 (0%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R+ELE V RWLQAN+ E+ GDW LADFYT DATYGWN+GP EDVMCVG+DEIRDIAL Sbjct 4 REELEAWVDRWLQANKDCEKAGDWRPLADFYTKDATYGWNIGPKEDVMCVGVDEIRDIAL 63 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKW 125 G EM+GL+ W Y YQ+V+IDEKQGE+VGFWKQ+ A+G + E+YGIGGSWFR Sbjct 64 GLEMEGLENWVYEYQKVLIDEKQGEIVGFWKQIVNKADGTQGEIYGIGGSWFRLNDDLLI 123 Query 126 NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 WQRDFFDFGHV+ +Y +LI++G LS GMQ+RIER+++G K+PGYYPLG+ PVP+W Sbjct 124 EWQRDFFDFGHVAYMYGKLIESGDLSEGMQRRIERSIAGEKLPGYYPLGEAPVPIW 179 >gi|145222186|ref|YP_001132864.1| hypothetical protein Mflv_1594 [Mycobacterium gilvum PYR-GCK] gi|315442625|ref|YP_004075504.1| hypothetical protein Mspyr1_09800 [Mycobacterium sp. Spyr1] gi|145214672|gb|ABP44076.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315260928|gb|ADT97669.1| hypothetical protein Mspyr1_09800 [Mycobacterium sp. Spyr1] Length=179 Score = 246 bits (629), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 114/176 (65%), Positives = 139/176 (79%), Gaps = 0/176 (0%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R++LED V RWL+AN+ AE+ GDW LA+FYTDDATYGWN+GP EDVMCVG EIRDIAL Sbjct 4 REQLEDWVQRWLKANQDAEKAGDWKPLAEFYTDDATYGWNIGPKEDVMCVGKTEIRDIAL 63 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKW 125 G EM+GL+ W Y YQR +IDEKQ E+VGFWKQVA +G + E+YGIGGSWFR Sbjct 64 GLEMEGLENWVYEYQRTLIDEKQNEIVGFWKQVANRTDGTQTEIYGIGGSWFRLNDQLLI 123 Query 126 NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 WQRDFFDFGHV Y +LI++G L+P MQKRIER++SG ++PGYYP+G+ P P+W Sbjct 124 EWQRDFFDFGHVVKGYAKLIESGDLTPTMQKRIERSLSGERLPGYYPIGEAPAPIW 179 >gi|312138817|ref|YP_004006153.1| hypothetical protein REQ_13840 [Rhodococcus equi 103S] gi|325676483|ref|ZP_08156161.1| hypothetical protein HMPREF0724_13944 [Rhodococcus equi ATCC 33707] gi|311888156|emb|CBH47468.1| conserved hypothetical protein [Rhodococcus equi 103S] gi|325552661|gb|EGD22345.1| hypothetical protein HMPREF0724_13944 [Rhodococcus equi ATCC 33707] Length=183 Score = 243 bits (620), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 112/183 (62%), Positives = 142/183 (78%), Gaps = 2/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + G+ R EL+++V RW+ AN+ AE GDW LADFYT+DATYGWN GP +D M VG DEI Sbjct 1 MTGFDRGELDEMVQRWVDANKKAEAAGDWKPLADFYTEDATYGWNYGPKQDFMAVGRDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDA--NGAEQEVYGIGGSWFR 118 RD+ALG EM GL+GW YPYQ VIDE+ G V+G WKQ++ A +G VYGIGGSWFR Sbjct 61 RDVALGLEMQGLEGWEYPYQEFVIDERSGNVIGLWKQISDAARPDGTNYAVYGIGGSWFR 120 Query 119 YAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPV 178 Y G +W+WQRDFFDFG+VSAL++E+I+ LS GMQ RI+R++SG K+PG+YP+G+ PV Sbjct 121 YGGNFQWSWQRDFFDFGNVSALFMEMIQNNALSTGMQSRIQRSISGEKLPGWYPVGQAPV 180 Query 179 PLW 181 PLW Sbjct 181 PLW 183 >gi|120406111|ref|YP_955940.1| hypothetical protein Mvan_5163 [Mycobacterium vanbaalenii PYR-1] gi|119958929|gb|ABM15934.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=179 Score = 241 bits (616), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 108/176 (62%), Positives = 138/176 (79%), Gaps = 0/176 (0%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R++LED V RWL+AN+ AE GDW LA+FYT+DATYGWN+GP EDVMCV EIRD+AL Sbjct 4 REQLEDWVQRWLKANQDAEAAGDWKPLAEFYTEDATYGWNIGPKEDVMCVNKQEIRDVAL 63 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKW 125 G EM+GL+ W Y YQ+ +IDEKQ E+VGFWKQ+A +G E+YGIGGSWFR Sbjct 64 GLEMEGLENWVYEYQKTLIDEKQNEIVGFWKQIANKGDGTRDEIYGIGGSWFRLNDQLLI 123 Query 126 NWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 WQRDFFDFGHV +++LI++G L+P MQKRIER+++G ++PGYYP+G+ PVP+W Sbjct 124 EWQRDFFDFGHVQKAFMKLIESGDLTPTMQKRIERSLAGERLPGYYPIGEAPVPIW 179 >gi|54024553|ref|YP_118795.1| hypothetical protein nfa25840 [Nocardia farcinica IFM 10152] gi|54016061|dbj|BAD57431.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=183 Score = 234 bits (596), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 107/183 (59%), Positives = 142/183 (78%), Gaps = 2/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + GY R+EL+++V RW+ N+ E +GDW LA+ YT+DATYGWN GP ++ M VG EI Sbjct 1 MTGYEREELDEMVRRWVAENQRCEEKGDWKPLAELYTEDATYGWNYGPTQEFMAVGRAEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFR 118 R++ALGQEM GL+GW YPYQ V+D++ G V+G WKQV AT +G+ V GIGGSWFR Sbjct 61 RELALGQEMLGLEGWTYPYQEFVVDDRSGSVIGLWKQVADATRPDGSHYTVNGIGGSWFR 120 Query 119 YAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPV 178 Y G +W+WQRDFFDFG+VSAL+LE+I A LSPGMQ+RI+R+ SG ++PG+Y +G++PV Sbjct 121 YGGNFQWSWQRDFFDFGNVSALFLEMITADALSPGMQQRIQRSTSGTRLPGWYKIGESPV 180 Query 179 PLW 181 PLW Sbjct 181 PLW 183 >gi|226306862|ref|YP_002766822.1| hypothetical protein RER_33750 [Rhodococcus erythropolis PR4] gi|226185979|dbj|BAH34083.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=183 Score = 234 bits (596), Expect = 6e-60, Method: Compositional matrix adjust. Identities = 108/183 (60%), Positives = 140/183 (77%), Gaps = 2/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + G+ R EL+++V RW++AN+ AE GDW LAD YT+DATYGWN GP +D M VG +EI Sbjct 1 MTGFDRAELDEMVQRWIEANKKAEAAGDWKPLADMYTEDATYGWNYGPKQDFMAVGREEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFR 118 R++ALG EM GL+GW YPYQ VIDE+ G V+G WKQ+ A +G+ VYGIGGSWFR Sbjct 61 REVALGLEMKGLEGWEYPYQDFVIDERSGNVIGLWKQISDAKREDGSNYSVYGIGGSWFR 120 Query 119 YAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPV 178 Y G +W+WQRDFFDFG+VSAL++E+I LS GMQ RI+R++SG+ +PG+YP+G PV Sbjct 121 YGGDFQWSWQRDFFDFGNVSALFMEMIGNNALSKGMQGRIQRSISGDPLPGWYPVGTAPV 180 Query 179 PLW 181 PLW Sbjct 181 PLW 183 >gi|229492764|ref|ZP_04386565.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320423|gb|EEN86243.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=183 Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 107/183 (59%), Positives = 140/183 (77%), Gaps = 2/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + G+ R EL+++V RW++AN+TAE GDW LAD YT+DATYGWN GP +D M VG +EI Sbjct 1 MTGFDRAELDEMVQRWIEANKTAEAAGDWKPLADMYTEDATYGWNYGPKQDFMAVGREEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFR 118 R++ALG EM GL+GW YPYQ VID++ G V+G WKQ+ A +G+ VYGIGGSWFR Sbjct 61 REVALGLEMKGLEGWEYPYQDFVIDDRSGNVIGLWKQISDAKREDGSNYSVYGIGGSWFR 120 Query 119 YAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPV 178 Y G +W+WQRDFFDFG+VSAL++E+I LS GMQ RI+R++SG+ +PG+YP+G PV Sbjct 121 YGGDFQWSWQRDFFDFGNVSALFMEMIGNNALSKGMQGRIQRSISGDPLPGWYPVGTAPV 180 Query 179 PLW 181 LW Sbjct 181 SLW 183 >gi|111021645|ref|YP_704617.1| hypothetical protein RHA1_ro04673 [Rhodococcus jostii RHA1] gi|110821175|gb|ABG96459.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=192 Score = 230 bits (587), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 109/180 (61%), Positives = 139/180 (78%), Gaps = 3/180 (1%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDI 63 + R EL+++V RW+ N+ E GDW LA+ YT+DATYGWN GP +D M VG DEIRD+ Sbjct 14 FDRAELDEMVQRWVDENKRCESLGDWKPLAEMYTEDATYGWNYGPKDDFMAVGRDEIRDL 73 Query 64 ALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVA--TDANGAEQEVYGIGGSWFRYAG 121 ALGQEMDGL+GW YPYQ+ VID++ G+V+GFWKQV+ T +G +V GIGGSWFRY G Sbjct 74 ALGQEMDGLEGWEYPYQQFVIDDRSGDVIGFWKQVSERTRDDGTHYQVTGIGGSWFRYGG 133 Query 122 GGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 +W+WQRDFFDFG+VS+L+LE+I +S GM RIERA SG ++PG+YP+GK PVPLW Sbjct 134 NFQWSWQRDFFDFGNVSSLFLEMITNNAMSDGMNARIERATSG-RLPGWYPVGKAPVPLW 192 >gi|226364182|ref|YP_002781964.1| hypothetical protein ROP_47720 [Rhodococcus opacus B4] gi|226242671|dbj|BAH53019.1| hypothetical protein [Rhodococcus opacus B4] Length=182 Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 107/183 (59%), Positives = 140/183 (77%), Gaps = 3/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 +A + R EL+++V RW+ N+ E GDW LA+ YT+DATYGWN GP +D M VG DEI Sbjct 1 MAPFDRAELDEMVQRWVDENKRCESLGDWKPLAEMYTEDATYGWNYGPKDDFMAVGRDEI 60 Query 61 RDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVA--TDANGAEQEVYGIGGSWFR 118 RD+ALGQEMDGL+GW YPYQ+ VID++ G+V+GFWKQV+ T +G +V GIGGSWFR Sbjct 61 RDLALGQEMDGLEGWEYPYQQFVIDDRSGDVIGFWKQVSERTRDDGTHYQVTGIGGSWFR 120 Query 119 YAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPV 178 Y G +W+WQRDFFDFG+VS+L+LE+I +S GM RI+RA SG ++PG+YP+G+ PV Sbjct 121 YGGNFQWSWQRDFFDFGNVSSLFLEMITNNAMSDGMNARIQRATSG-RLPGWYPVGQAPV 179 Query 179 PLW 181 LW Sbjct 180 SLW 182 >gi|262203704|ref|YP_003274912.1| hypothetical protein Gbro_3841 [Gordonia bronchialis DSM 43247] gi|262087051|gb|ACY23019.1| conserved hypothetical protein [Gordonia bronchialis DSM 43247] Length=181 Score = 218 bits (556), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 106/181 (59%), Positives = 135/181 (75%), Gaps = 3/181 (1%) Query 3 GYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD 62 + R ELE++ RWL AN AE+ GDW LADFYT+DATYGWN GP +D M VG DEIR+ Sbjct 2 SFDRAELEEMKQRWLDANVEAEKAGDWKPLADFYTEDATYGWNYGPEKDFMAVGRDEIRE 61 Query 63 IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFRYA 120 +ALGQEM+GL+GW YPYQ VIDE G+++G WKQV T +G + GI GSWF+YA Sbjct 62 LALGQEMEGLEGWTYPYQAWVIDETTGDMIGLWKQVYERTRDDGTNYALEGIQGSWFKYA 121 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 G +++WQRDFFDFG+VSAL++EL+K +S GM KRIE++ G+ +PG+YP GK PVP Sbjct 122 GNFQFSWQRDFFDFGNVSALFVELLKNNAMSDGMLKRIEKSAPGD-LPGWYPFGKAPVPF 180 Query 181 W 181 W Sbjct 181 W 181 >gi|326384236|ref|ZP_08205918.1| hypothetical protein SCNU_14931 [Gordonia neofelifaecis NRRL B-59395] gi|326197101|gb|EGD54293.1| hypothetical protein SCNU_14931 [Gordonia neofelifaecis NRRL B-59395] Length=184 Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 104/181 (58%), Positives = 136/181 (76%), Gaps = 3/181 (1%) Query 3 GYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD 62 +PR EL+++ RWL AN AE+ GDW LA+FYT+DATYGWN GP +D M VG DEIR+ Sbjct 2 AFPRSELDEMKQRWLDANVEAEKAGDWRPLAEFYTEDATYGWNYGPEKDFMAVGRDEIRE 61 Query 63 IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFRYA 120 IALGQEM+GL+GW YPYQ VIDE+ G+++G W+Q+ +G+ V+GIGGSWFRYA Sbjct 62 IALGQEMEGLEGWEYPYQAWVIDERTGDMIGLWRQINEGRREDGSNYAVHGIGGSWFRYA 121 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPL 180 G +++WQRDFFDFG+VSAL+LE++ S GM KRIE++ GN +PG+YP + PV L Sbjct 122 GNFQFSWQRDFFDFGNVSALFLEMLTNQACSDGMLKRIEKSAPGN-LPGWYPRDEAPVGL 180 Query 181 W 181 W Sbjct 181 W 181 >gi|343927845|ref|ZP_08767313.1| hypothetical protein GOALK_097_02750 [Gordonia alkanivorans NBRC 16433] gi|343762486|dbj|GAA14239.1| hypothetical protein GOALK_097_02750 [Gordonia alkanivorans NBRC 16433] Length=186 Score = 211 bits (538), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 101/180 (57%), Positives = 134/180 (75%), Gaps = 3/180 (1%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDI 63 + R ELE++ RWL AN AE+ GDW LA+FYT+DATYGWN GP +D M VG +EIR++ Sbjct 8 FDRAELEEMKERWLAANIEAEKAGDWKPLAEFYTEDATYGWNYGPKKDFMAVGREEIREL 67 Query 64 ALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWFRYAG 121 ALGQEM+GL+GW YPYQ VIDEK G+++G WKQV T +G+ + GI GSWF+Y G Sbjct 68 ALGQEMEGLEGWEYPYQAWVIDEKTGDMIGLWKQVYEGTREDGSHYALEGIQGSWFKYGG 127 Query 122 GGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVPLW 181 +++WQRDFFD+G+VSAL++E++K +S GM KR+E+A GN +PG+Y GK PV W Sbjct 128 NFQFSWQRDFFDYGNVSALFIEMMKNNAMSDGMLKRVEKAAPGN-LPGWYDFGKAPVAFW 186 >gi|319950410|ref|ZP_08024326.1| hypothetical protein ES5_12555 [Dietzia cinnamea P4] gi|319435926|gb|EFV91130.1| hypothetical protein ES5_12555 [Dietzia cinnamea P4] Length=191 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 95/182 (53%), Positives = 121/182 (67%), Gaps = 6/182 (3%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDI 63 + R E+ + V RW++AN ER DW LADF+ +DATYGWN G +D M VG DEIRDI Sbjct 4 FDRAEIAEFVDRWIEANAECERNRDWKPLADFFAEDATYGWNYGTKDDFMAVGRDEIRDI 63 Query 64 ALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDA----NGAEQEVYGIGGSWFRY 119 ALGQEM+GL GW YPY R +ID + G+V+ WKQ+A D G EV+G+GGSWF Y Sbjct 64 ALGQEMEGLDGWEYPYIRTIIDPETGDVLCLWKQIARDTVDPKTGEPYEVHGLGGSWFLY 123 Query 120 AGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTPVP 179 G +W WQRDFFDFG+V L + + +A L+P M+KR E A G K G+Y + +P P Sbjct 124 NGNQQWAWQRDFFDFGNVVDLMMRMYEADALTPSMKKRFEGA--GGKPAGWYRIEDSPAP 181 Query 180 LW 181 LW Sbjct 182 LW 183 >gi|53802647|ref|YP_112650.1| hypothetical protein MCA0111 [Methylococcus capsulatus str. Bath] gi|53756408|gb|AAU90699.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath] Length=200 Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 92/180 (52%), Positives = 123/180 (69%), Gaps = 3/180 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTL-LADFYTDDATYGWNVGPNEDVMCVGIDE 59 + YPR ELE++V RWL ANR AER GDW L YT+DA YGWN+GP+++ + G + Sbjct 1 MPAYPRAELEEMVARWLAANRDAERAGDWIRSLGAMYTEDAEYGWNMGPDQEFLARGRQQ 60 Query 60 IRDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQV--ATDANGAEQEVYGIGGSWF 117 I + ALG M+G + WRYPY VVID+ QGEV+GFW+QV A +G+ EV G+GGSWF Sbjct 61 IMEWALGFHMEGFEQWRYPYDHVVIDDAQGEVIGFWRQVSPARRPDGSHYEVAGLGGSWF 120 Query 118 RYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTP 177 RY G +W+WQRDFFD G+V AL++EL G+L ++++I R G +PG +PL P Sbjct 121 RYGGDYQWSWQRDFFDLGNVKALFMELAANGQLDAPVRRKIARLAKGQAMPGVHPLHPAP 180 >gi|304310753|ref|YP_003810351.1| hypothetical protein HDN1F_11110 [gamma proteobacterium HdN1] gi|301796486|emb|CBL44694.1| Conserved hypothetical protein [gamma proteobacterium HdN1] Length=200 Score = 187 bits (474), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 90/183 (50%), Positives = 120/183 (66%), Gaps = 3/183 (1%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWT-LLADFYTDDATYGWNVGPNEDVMCVGIDE 59 ++ +PR+ELE++V RWLQANR AE+ GDW L YT+DA YGWN+GPN++ M E Sbjct 1 MSSFPREELEEMVTRWLQANRDAEKEGDWAKHLGAMYTEDAQYGWNIGPNQEFMANNRQE 60 Query 60 IRDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQ--VATDANGAEQEVYGIGGSWF 117 I D+A+G +M G + W YPY ++IDEK+G V+GFWKQ A A+G EV GIGGSWF Sbjct 61 IIDLAIGYQMKGFEDWEYPYHDIIIDEKRGTVIGFWKQRAPAKRADGTVYEVAGIGGSWF 120 Query 118 RYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTP 177 Y G +W WQRDFFD G+ AL+ E+ G LSP ++K+I+ +PG+ L P Sbjct 121 EYGGNFQWRWQRDFFDLGNTKALFFEMAGDGALSPTVKKKIQTHAHNKLLPGHRYLRPEP 180 Query 178 VPL 180 L Sbjct 181 DTL 183 >gi|326331687|ref|ZP_08197975.1| hypothetical protein NBCG_03126 [Nocardioidaceae bacterium Broad-1] gi|325950486|gb|EGD42538.1| hypothetical protein NBCG_03126 [Nocardioidaceae bacterium Broad-1] Length=199 Score = 159 bits (401), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 84/184 (46%), Positives = 113/184 (62%), Gaps = 10/184 (5%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R E+E WL NR AE GDW LAD Y +DATYGW P+E M VG D+IR+ AL Sbjct 3 RTEIERFWADWLSLNRQAEAEGDWAPLADVYAEDATYGWMYTPDEHFMAVGRDQIREWAL 62 Query 66 GQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQ---VATDANGAEQEVYGIGGSWFRYA-- 120 G EM GL+GW Y YQ VID+ V+GFW+Q + DA G E E+ GIGGSWF A Sbjct 63 GTEMAGLEGWHYDYQATVIDDVNAMVIGFWRQRAGIVDDATGEEYEILGIGGSWFGVAPR 122 Query 121 ---GGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYPLGKTP 177 G ++ WQRD+FD G + +L+++KA K + G+ +R+ +++G + PG+Y L P Sbjct 123 PDGNGLEFAWQRDWFDLGSTATTFLDIVKAKKATAGLLERM--SLNGIEQPGHYRLADLP 180 Query 178 VPLW 181 +W Sbjct 181 STVW 184 >gi|146275955|ref|YP_001166115.1| hypothetical protein Saro_3730 [Novosphingobium aromaticivorans DSM 12444] gi|145322646|gb|ABP64589.1| hypothetical protein Saro_3730 [Novosphingobium aromaticivorans DSM 12444] Length=182 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 54/162 (34%), Positives = 80/162 (50%), Gaps = 10/162 (6%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLAD-FYTDDATYGWNVGPNEDVMCVGIDE 59 + YPR+E+E + +A AERR W +AD FY ++ATY G + V DE Sbjct 1 MVSYPREEVEAAIEGLREAFVEAERRNHWAWIADEFYHENATYYCPYGGSMPVFARNRDE 60 Query 60 IRDIALGQEMD---GLQGWRYPYQRVVIDEKQGEVVGFW--KQVATDANGAEQEVYGIGG 114 IR G++MD G GW +P ++ + + W + +G+ E G+ Sbjct 61 IRATHYGRDMDVGSGWAGWSFPILEYAVNGDR--IFSRWVNRGPGRRPDGSFYETEGV-- 116 Query 115 SWFRYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQK 156 S+ Y GGGK+ Q D FD GH L EL +AG L P +++ Sbjct 117 SFITYGGGGKFTSQLDLFDIGHQMKLCDELKEAGLLDPALER 158 >gi|148554969|ref|YP_001262551.1| hypothetical protein Swit_2054 [Sphingomonas wittichii RW1] gi|148500159|gb|ABQ68413.1| hypothetical protein Swit_2054 [Sphingomonas wittichii RW1] Length=172 Score = 67.8 bits (164), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 51/159 (33%), Positives = 79/159 (50%), Gaps = 10/159 (6%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLAD-FYTDDATYGWNVGPNEDVMCVGIDEIRD 62 Y R+E+E + R +A AERR W+ +AD Y +DATY G V +EIR Sbjct 3 YSREEVEAAIIRLREAFVEAERRNSWSWIADELYHEDATYYCPYGGVMPVFARSREEIRA 62 Query 63 IALGQEMD---GLQGWRYPYQRVVIDEKQGEVVGFW--KQVATDANGAEQEVYGIGGSWF 117 G++MD G +GW +P ++ + + W + +G+ E G+ S+ Sbjct 63 THYGRDMDVGSGWEGWSFPITDFAVNGDR--IFSRWVNRGPGRRPDGSYYETDGV--SFI 118 Query 118 RYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQK 156 Y G GK++ Q D FD GH L EL +AG L+ +++ Sbjct 119 TYGGNGKFSSQYDLFDIGHQMMLCDELKQAGLLNETLER 157 >gi|254481976|ref|ZP_05095218.1| hypothetical protein GPB2148_47 [marine gamma proteobacterium HTCC2148] gi|214037666|gb|EEB78331.1| hypothetical protein GPB2148_47 [marine gamma proteobacterium HTCC2148] Length=175 Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 41/155 (27%), Positives = 68/155 (44%), Gaps = 7/155 (4%) Query 7 DELEDVVHRWLQANRTAERRGDWTLLAD-FYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 ++L + + A+R A +W D Y D Y +V+ GIDEI+ Sbjct 7 EQLRATADKLIAAHRQAAIDNNWLFFVDELYAVDCVYSCQYAGVMEVVADGIDEIKATHY 66 Query 66 GQEMD-GLQGWRYPYQRVVIDEKQGEVVGFW--KQVATDANGAEQEVYGIGGSWFRYAGG 122 G++M G +GW +PY+ V +V W + A+G+ + G+ S+ + Sbjct 67 GRDMQVGWEGWSFPYEGVYTG-SDNRLVTHWLNRGPGKRADGSYYQTPGV--SFIQLNEE 123 Query 123 GKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKR 157 + Q D FD H L EL AG LS ++++ Sbjct 124 ARICRQFDMFDLAHQMKLCDELENAGLLSVQLKQQ 158 >gi|16330207|ref|NP_440935.1| hypothetical protein slr0887 [Synechocystis sp. PCC 6803] gi|1652695|dbj|BAA17615.1| slr0887 [Synechocystis sp. PCC 6803] gi|339273302|dbj|BAK49789.1| hypothetical protein SYNGTS_1041 [Synechocystis sp. PCC 6803] Length=269 Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust. Identities = 26/91 (29%), Positives = 44/91 (49%), Gaps = 7/91 (7%) Query 48 PNEDVMCVGIDEIRDIALGQEMDGLQGWRYP---YQRVVIDEKQGEVVGFW--KQVATDA 102 P+ V+ G + D+ Q++ G++ W P YQR + + K G + W +++A + Sbjct 92 PSGQVLITGRELTEDLQQRQQL-GIKAWLMPPGRYQRSLAELKTGNYLAPWLAQRIAQEN 150 Query 103 NGAEQEVYGIGGSWFRYAGGGKWNWQR-DFF 132 N E + I G W A G W W+ +FF Sbjct 151 NAQEAILTDINGHWLETATGNLWGWRDGEFF 181 >gi|294141009|ref|YP_003556987.1| secretion system apparatus protein ssaL [Shewanella violacea DSS12] gi|293327478|dbj|BAJ02209.1| secretion system apparatus protein ssaL, putative [Shewanella violacea DSS12] Length=342 Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust. Identities = 32/118 (28%), Positives = 58/118 (50%), Gaps = 21/118 (17%) Query 59 EIRDIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGF------WKQV----ATDANGAEQE 108 ++R AL + M+GL Y++ + EK+ + + F +Q+ +T N ++ Sbjct 41 DVRAEALEETMEGLSLGLSRYKKQISSEKEPKDLRFDALEKLMQQLGEEQSTSVNKLVEQ 100 Query 109 VYGIGGS---WFRYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVS 163 G+G S + G G FD G V L + L+ +GKLS ++K+I++A+S Sbjct 101 FSGLGSSDKILAQLNGSG--------FDSGTVMCLLMALVMSGKLSESVRKKIKKALS 150 >gi|148554967|ref|YP_001262549.1| hypothetical protein Swit_2052 [Sphingomonas wittichii RW1] gi|148500157|gb|ABQ68411.1| hypothetical protein Swit_2052 [Sphingomonas wittichii RW1] Length=172 Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust. Identities = 43/171 (26%), Positives = 67/171 (40%), Gaps = 13/171 (7%) Query 4 YPRDELEDVVHRWLQANRTAER-RGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD 62 YP E+ L A R DW LA+ +T+DA Y V VG + IR Sbjct 4 YPESEVRAAWEHVLAAREKIGRGEADWGDLAEHFTEDAVYIDAVWGRY----VGREAIRT 59 Query 63 IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVA-TDANGAEQEVYGIGGSWFRYAG 121 + M G + WR+P ++ + V FW +V NG + + YAG Sbjct 60 F-MHDCMVGFEDWRFPTLWTLVKDNL-VVCAFWSRVPGLKPNGDHADCLCFSVA--IYAG 115 Query 122 GGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGNKVPGYYP 172 G + ++ D F+ + L E+ G P + + N++P P Sbjct 116 DGLFCYETDVFNMAELGVLVEEV---GWTPPANSSPVPQKPDRNQLPPDRP 163 >gi|315041084|ref|XP_003169919.1| hypothetical protein MGYG_08093 [Arthroderma gypseum CBS 118893] gi|311345881|gb|EFR05084.1| hypothetical protein MGYG_08093 [Arthroderma gypseum CBS 118893] Length=451 Score = 38.9 bits (89), Expect = 0.29, Method: Compositional matrix adjust. Identities = 41/154 (27%), Positives = 65/154 (43%), Gaps = 27/154 (17%) Query 37 TDDATYG----WNVGPNEDVMCVGIDEIRDIALGQEMDGL-----QGWRYPYQRVVIDEK 87 TD A G + +G +++C ID + + +G+E+D L + WRY ++ + Sbjct 40 TDSAHSGHGMTFTIGRGNEIVCAAIDALATLLVGKELDSLTADWGKTWRY-----LVSDS 94 Query 88 QGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKWNWQRDF--------FDFGHVSA 139 Q +G K V A GA V + W + W D DF +++ Sbjct 95 QLRWIGPEKGVIHLALGA--IVNALWDLWAKSLNKPVWRVVADMTPEELVKCIDFRYITD 152 Query 140 LYL--ELIK-AGKLSPGMQKRIERAVSGNKVPGY 170 E IK ++ PG ++RIE A S VP Y Sbjct 153 ALTPDEAIKLLQEVEPGKKQRIEEAESNQAVPAY 186 >gi|169630047|ref|YP_001703696.1| hypothetical protein MAB_2964 [Mycobacterium abscessus ATCC 19977] gi|169242014|emb|CAM63042.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=166 Score = 38.9 bits (89), Expect = 0.30, Method: Compositional matrix adjust. Identities = 35/133 (27%), Positives = 61/133 (46%), Gaps = 9/133 (6%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD- 62 + RDEL+++ L+ +GDW AD ++++ATY + P G + IR Sbjct 4 WSRDELQNMFDHHLRVVDEIGPKGDWAKYADLFSENATY---IEPTYGTF-EGREAIRTS 59 Query 63 -IALGQEMDGLQGWRYPYQRVVIDEKQGEVVG-FWKQVATDANGAEQEVYGIGGSWFRYA 120 + E G++ Y V+DE+ G ++ ++ +G+ E I S FRYA Sbjct 60 MVKTMSEFPGVEMPHYFSNWHVVDEEHGWIICELVNRMKDPGDGSIWEATNI--SIFRYA 117 Query 121 GGGKWNWQRDFFD 133 G W + D ++ Sbjct 118 GDNHWASEEDVYN 130 >gi|326471194|gb|EGD95203.1| mandelate racemase/muconate lactonizing enzyme [Trichophyton tonsurans CBS 112818] Length=451 Score = 37.7 bits (86), Expect = 0.65, Method: Compositional matrix adjust. Identities = 40/154 (26%), Positives = 65/154 (43%), Gaps = 27/154 (17%) Query 37 TDDATYG----WNVGPNEDVMCVGIDEIRDIALGQEMDGL-----QGWRYPYQRVVIDEK 87 TD A G + +G +++C ID + + +G+E+D L + WR+ ++ + Sbjct 40 TDSAHKGHGMTFTIGRGNEIVCTAIDALATLLVGKELDSLTADWGKTWRF-----LVSDS 94 Query 88 QGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKWNWQRDF--------FDFGHVSA 139 Q +G K V A GA V + W + W D DF +++ Sbjct 95 QLRWIGPEKGVIHLALGA--IVNALWDLWAKTLNKPVWRVVADMTPEEVVKCIDFRYITD 152 Query 140 LYL--ELIK-AGKLSPGMQKRIERAVSGNKVPGY 170 E IK ++ PG ++RIE A S VP Y Sbjct 153 ALTPEEAIKLLQEVEPGKKQRIEEAESNQAVPAY 186 >gi|296812985|ref|XP_002846830.1| mandelate racemase/muconate lactonizing enzyme family protein [Arthroderma otae CBS 113480] gi|238842086|gb|EEQ31748.1| mandelate racemase/muconate lactonizing enzyme family protein [Arthroderma otae CBS 113480] Length=451 Score = 37.4 bits (85), Expect = 0.98, Method: Compositional matrix adjust. Identities = 41/156 (27%), Positives = 67/156 (43%), Gaps = 31/156 (19%) Query 37 TDDATYG----WNVGPNEDVMCVGIDEIRDIALGQEMDGL-----QGWRYPYQRVVIDEK 87 TD A G + +G +++C ID + + +G+E+D L + WRY ++ + Sbjct 40 TDSAHAGHGMTFTIGRGNEIVCAAIDALAPLLVGKELDSLTADWGKTWRY-----LVSDS 94 Query 88 QGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAGGGKWNWQRDF--------FDFGHVS- 138 Q +G K V A GA V + W + W D DF +++ Sbjct 95 QLRWIGPEKGVIHLALGA--VVNALWDLWAKTLNKPVWKVVADMTPEELVRCIDFRYITD 152 Query 139 ALY----LELIKAGKLSPGMQKRIERAVSGNKVPGY 170 AL ++L++ ++ PG Q RIE A VP Y Sbjct 153 ALTPEEAIQLLR--EVEPGKQLRIEEAERNEAVPAY 186 >gi|302661191|ref|XP_003022265.1| hypothetical protein TRV_03587 [Trichophyton verrucosum HKI 0517] gi|291186204|gb|EFE41647.1| hypothetical protein TRV_03587 [Trichophyton verrucosum HKI 0517] Length=451 Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust. Identities = 36/143 (26%), Positives = 61/143 (43%), Gaps = 23/143 (16%) Query 44 WNVGPNEDVMCVGIDEIRDIALGQEMDGL-----QGWRYPYQRVVIDEKQGEVVGFWKQV 98 + +G +++C ID + + +G+E++ L + WRY ++ + Q +G K V Sbjct 51 FTIGRGNEIVCTAIDALATLLVGKELESLTADWGKTWRY-----LVSDSQLRWIGPEKGV 105 Query 99 ATDANGAEQEVYGIGGSWFRYAGGGKWNWQRDF--------FDFGHVSALYL--ELIKAG 148 A GA V + W + W D DF +++ E IK Sbjct 106 IHLALGA--IVNALWDLWAKTLNKPVWRVVADMTPEEVVTCIDFRYITDALTPEEAIKLL 163 Query 149 K-LSPGMQKRIERAVSGNKVPGY 170 + + PG ++RIE A S VP Y Sbjct 164 REVEPGKRQRIEEAESNQAVPAY 186 >gi|50554719|ref|XP_504768.1| YALI0E34331p [Yarrowia lipolytica] gi|49650637|emb|CAG80375.1| YALI0E34331p [Yarrowia lipolytica] Length=597 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 0/25 (0%) Query 28 DWTLLADFYTDDATYGWNVGPNEDV 52 DWTL AD++TD+ T+G +GP + V Sbjct 152 DWTLFADYWTDEVTFGPEIGPKDFV 176 >gi|325676469|ref|ZP_08156147.1| hypothetical protein HMPREF0724_13930 [Rhodococcus equi ATCC 33707] gi|325552647|gb|EGD22331.1| hypothetical protein HMPREF0724_13930 [Rhodococcus equi ATCC 33707] Length=166 Score = 36.2 bits (82), Expect = 2.1, Method: Compositional matrix adjust. Identities = 37/132 (29%), Positives = 60/132 (46%), Gaps = 11/132 (8%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R+ELE + + A + GDW L AD +T+DATY + + G +EIR + Sbjct 5 REELEGAFENYQKTVVRATQTGDWNLFADMFTEDATYLEHAFGRFE----GREEIRRW-V 59 Query 66 GQEMDGLQGWR---YPYQRVVIDEKQGEVVGFWKQVATDA-NGAEQEVYGIGGSWFRYAG 121 + M G R +P V+D ++G V+ + D +G E I + YAG Sbjct 60 TRTMTAFPGNRMPEFPASWHVVDVERGWVICEIQNPMEDPGDGTEHGAANI--TILHYAG 117 Query 122 GGKWNWQRDFFD 133 W+ + D ++ Sbjct 118 DDLWSHEEDAYN 129 >gi|312138831|ref|YP_004006167.1| hypothetical protein REQ_13980 [Rhodococcus equi 103S] gi|311888170|emb|CBH47482.1| hypothetical protein REQ_13980 [Rhodococcus equi 103S] Length=166 Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/132 (29%), Positives = 60/132 (46%), Gaps = 11/132 (8%) Query 6 RDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDIAL 65 R+ELE + + A + GDW L AD +T+DATY + + G +EIR + Sbjct 5 REELEGAFENYQKTVVRATQTGDWNLFADMFTEDATYLEHAFGRFE----GREEIRRW-V 59 Query 66 GQEMDGLQGWR---YPYQRVVIDEKQGEVVGFWKQVATDA-NGAEQEVYGIGGSWFRYAG 121 + M G R +P V+D ++G V+ + D +G E I + YAG Sbjct 60 TRTMTAFPGNRMPEFPASWHVVDVERGWVICEIQNPMEDPGDGTEHGAANI--TILHYAG 117 Query 122 GGKWNWQRDFFD 133 W+ + D ++ Sbjct 118 DDLWSHEEDAYN 129 >gi|111022887|ref|YP_705859.1| hypothetical protein RHA1_ro05924 [Rhodococcus jostii RHA1] gi|110822417|gb|ABG97701.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=167 Score = 35.8 bits (81), Expect = 2.5, Method: Compositional matrix adjust. Identities = 37/134 (28%), Positives = 58/134 (44%), Gaps = 11/134 (8%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRDI 63 + R ELE+ + + GDW AD +T+DATY + + D G + IR Sbjct 3 WSRAELEEAFAHYQRTVSRCVELGDWNGFADLFTEDATYVEHAFGDFD----GREAIRKW 58 Query 64 ALGQEMDGLQGWR---YPYQRVVIDEKQGEVVGFWKQVATD-ANGAEQEVYGIGGSWFRY 119 + + M G R +P VIDE +G V+ D +G+E I + Y Sbjct 59 -VTRTMSAFPGSRMTAFPANWYVIDEDRGWVICEIDNPMEDPGDGSEHAAANI--TILHY 115 Query 120 AGGGKWNWQRDFFD 133 AG W+ + D ++ Sbjct 116 AGDNLWSREEDAYN 129 >gi|254490817|ref|ZP_05104000.1| hypothetical protein MDMS009_1151 [Methylophaga thiooxidans DMS010] gi|224463989|gb|EEF80255.1| hypothetical protein MDMS009_1151 [Methylophaga thiooxydans DMS010] Length=146 Score = 35.8 bits (81), Expect = 2.8, Method: Compositional matrix adjust. Identities = 30/128 (24%), Positives = 52/128 (41%), Gaps = 8/128 (6%) Query 2 AGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIR 61 A P + D +W QA +G+ L FYT+ AT V P + G ++IR Sbjct 20 AQSPEQVVADANKQWDQA----LNQGNIDKLVSFYTESAT----VSPGNGAVLSGHEDIR 71 Query 62 DIALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSWFRYAG 121 + G +G+ + V+ ++Q +G W+ +A G G+ + + Sbjct 72 SLFGGFIENGVHNHQIKTVDVMAADQQITQIGHWQAEGVNAEGQAISFGGVLVTVLKQNA 131 Query 122 GGKWNWQR 129 G+W Q Sbjct 132 AGEWELQS 139 >gi|225548065|ref|ZP_03769350.1| hypothetical protein RUMHYD_00044 [Blautia hydrogenotrophica DSM 10507] gi|225040741|gb|EEG50987.1| hypothetical protein RUMHYD_00044 [Blautia hydrogenotrophica DSM 10507] Length=729 Score = 35.4 bits (80), Expect = 3.7, Method: Composition-based stats. Identities = 25/71 (36%), Positives = 35/71 (50%), Gaps = 10/71 (14%) Query 107 QEVYGIGGSWFRYAGGGKWNWQ----RDFFDFGHVSALYLELIKAGKLSPGMQKRIERAV 162 +E YG+ YAGG KWNWQ ++F F AL +E GK+ +Q +E+ Sbjct 211 KEYYGLA----VYAGGVKWNWQDNKSKNFRTFKKEQALQIEKEANGKVLRIVQ--VEKKD 264 Query 163 SGNKVPGYYPL 173 + PG Y L Sbjct 265 KKSYAPGLYDL 275 >gi|226307687|ref|YP_002767647.1| hypothetical protein RER_42000 [Rhodococcus erythropolis PR4] gi|226186804|dbj|BAH34908.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=166 Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust. Identities = 37/151 (25%), Positives = 62/151 (42%), Gaps = 13/151 (8%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD- 62 + R ELED + R GDW AD +T+D Y + + G + +R Sbjct 3 WTRTELEDAFAGYQNTVVECTRSGDWNAFADMFTEDVVYVEHAFGTLN----GREAVRKW 58 Query 63 -IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATD-ANGAEQEVYGIGGSWFRYA 120 E G + +P V+DE++G +V D +G++ I + YA Sbjct 59 VTRTMTEFPGHRMTEFPANWFVVDEQRGWIVCEIDNPMEDPGDGSKHGAANI--TILHYA 116 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLS 151 G G W+ + D ++ +L + KA L+ Sbjct 117 GNGLWSREEDAYN----PMNFLSMAKAWCLA 143 >gi|229493870|ref|ZP_04387642.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319147|gb|EEN84996.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=166 Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust. Identities = 37/151 (25%), Positives = 62/151 (42%), Gaps = 13/151 (8%) Query 4 YPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEIRD- 62 + R ELED + R GDW AD +T+D Y + + G + +R Sbjct 3 WTRTELEDAFAGYQNTVVECTRSGDWNAFADMFTEDVVYVEHAFGTLN----GREAVRKW 58 Query 63 -IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATD-ANGAEQEVYGIGGSWFRYA 120 E G + +P V+DE++G +V D +G++ I + YA Sbjct 59 VTRTMTEFPGHRMTEFPANWFVVDEQRGWIVCEIDNPMEDPGDGSKHGAANI--TILHYA 116 Query 121 GGGKWNWQRDFFDFGHVSALYLELIKAGKLS 151 G G W+ + D ++ +L + KA L+ Sbjct 117 GNGLWSREEDAYN----PMNFLSMAKAWCLA 143 >gi|134298531|ref|YP_001112027.1| putative PAS/PAC sensor protein [Desulfotomaculum reducens MI-1] gi|134051231|gb|ABO49202.1| putative PAS/PAC sensor protein [Desulfotomaculum reducens MI-1] Length=527 Score = 35.0 bits (79), Expect = 4.9, Method: Compositional matrix adjust. Identities = 23/73 (32%), Positives = 36/73 (50%), Gaps = 5/73 (6%) Query 106 EQEVYGIGGSWFRYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLSPGMQKRIERAVSGN 165 E E++G F G K ++ F+F H L+L+ I G+LSP +Q ++ R + Sbjct 274 ESELFGYADGAF---TGAKKGGKQGLFEFAHEGTLFLDEI--GELSPHLQAKLLRVLQDG 328 Query 166 KVPGYYPLGKTPV 178 KV +TPV Sbjct 329 KVRRIGDRQETPV 341 >gi|169629016|ref|YP_001702665.1| hypothetical protein MAB_1928c [Mycobacterium abscessus ATCC 19977] gi|169240983|emb|CAM62011.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=167 Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust. Identities = 39/160 (25%), Positives = 60/160 (38%), Gaps = 21/160 (13%) Query 1 VAGYPRDELEDVVHRWLQANRTAERRGDWTLLADFYTDDATYGWNVGPNEDVMCVGIDEI 60 + + R ELE+ + GDW A+ YT+DA Y +V G + I Sbjct 1 MPSFTRAELEEAFAQHQATVHRCIETGDWNPYAEMYTEDALYIEHVVGR----LHGKEAI 56 Query 61 RD--IALGQEMDGLQGWRYPYQRVVIDEKQGEVVGFWKQVATDANGAEQEVYGIGGSW-- 116 R A+ E G P V D ++G VV V +D G G W Sbjct 57 RQYITAVMAEFPGNHMPSLPATWTVFDPEKGWVVCEIDNVMSDP--------GDGQHWGE 108 Query 117 -----FRYAGGGKWNWQRDFFDFGHVSALYLELIKAGKLS 151 YAG G W+ Q D ++ ++ + +A + + Sbjct 109 PNLTVLHYAGDGLWSQQEDAYNPANMVKMVRRWCRAAEAA 148 Lambda K H 0.319 0.141 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 165240920448 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40