BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0763c Length=68 Score E Sequences producing significant alignments: (Bits) Value gi|15840178|ref|NP_335215.1| ferredoxin-related protein [Mycobac... 142 2e-32 gi|15607903|ref|NP_215277.1| ferredoxin [Mycobacterium tuberculo... 141 3e-32 gi|340625782|ref|YP_004744234.1| putative ferredoxin [Mycobacter... 130 9e-29 gi|296166491|ref|ZP_06848922.1| ferredoxin [Mycobacterium parasc... 110 1e-22 gi|118616314|ref|YP_904646.1| ferredoxin [Mycobacterium ulcerans... 108 3e-22 gi|342862195|ref|ZP_08718837.1| hypothetical protein MCOL_25016 ... 107 8e-22 gi|41406695|ref|NP_959531.1| hypothetical protein MAP0597c [Myco... 105 2e-21 gi|254818460|ref|ZP_05223461.1| hypothetical protein MintA_00967... 104 4e-21 gi|240171677|ref|ZP_04750336.1| hypothetical protein MkanA1_2035... 103 1e-20 gi|289756851|ref|ZP_06516229.1| ferredoxin [Mycobacterium tuberc... 100 6e-20 gi|333992245|ref|YP_004524859.1| ferredoxin [Mycobacterium sp. J... 99.8 1e-19 gi|169628306|ref|YP_001701955.1| putative ferredoxin [Mycobacter... 96.3 2e-18 gi|120406110|ref|YP_955939.1| hypothetical protein Mvan_5162 [My... 94.7 4e-18 gi|315442626|ref|YP_004075505.1| ferredoxin [Mycobacterium sp. S... 94.4 5e-18 gi|145222187|ref|YP_001132865.1| hypothetical protein Mflv_1595 ... 94.4 5e-18 gi|118470271|ref|YP_890091.1| cytochrome P450 [Mycobacterium sme... 93.6 9e-18 gi|108801546|ref|YP_641743.1| hypothetical protein Mmcs_4583 [My... 90.9 5e-17 gi|325676484|ref|ZP_08156162.1| ferredoxin [Rhodococcus equi ATC... 84.3 5e-15 gi|111021644|ref|YP_704616.1| ferredoxin [Rhodococcus jostii RHA... 84.0 6e-15 gi|54024552|ref|YP_118794.1| putative ferredoxin [Nocardia farci... 83.6 9e-15 gi|312138816|ref|YP_004006152.1| hypothetical protein REQ_13830 ... 82.4 2e-14 gi|226364181|ref|YP_002781963.1| 3Fe-4S ferredoxin [Rhodococcus ... 80.9 6e-14 gi|229492740|ref|ZP_04386541.1| conserved hypothetical protein [... 80.1 1e-13 gi|254818474|ref|ZP_05223475.1| ferredoxin [Mycobacterium intrac... 79.3 2e-13 gi|226306863|ref|YP_002766823.1| 3Fe-4S ferredoxin [Rhodococcus ... 79.0 2e-13 gi|262203705|ref|YP_003274913.1| hypothetical protein Gbro_3842 ... 70.1 9e-11 gi|343927846|ref|ZP_08767314.1| putative 3Fe-4S ferredoxin [Gord... 68.9 2e-10 gi|13591777|gb|AAK31349.1|AF350429_2 putative ferredoxin [Nocard... 63.9 7e-09 gi|326384237|ref|ZP_08205919.1| hypothetical protein SCNU_14936 ... 62.4 2e-08 gi|296164106|ref|ZP_06846725.1| probable ferredoxin [Mycobacteri... 60.5 8e-08 gi|256371368|ref|YP_003109192.1| ferredoxin (3Fe-4S) [Acidimicro... 58.9 2e-07 gi|108801618|ref|YP_641815.1| hypothetical protein Mmcs_4655 [My... 58.9 3e-07 gi|326332421|ref|ZP_08198698.1| ferredoxin-related protein [Noca... 57.8 5e-07 gi|226349655|ref|YP_002776769.1| 3Fe-4S ferredoxin [Rhodococcus ... 57.8 6e-07 gi|324999447|ref|ZP_08120559.1| 3Fe-4S ferredoxin [Pseudonocardi... 57.4 7e-07 gi|302530424|ref|ZP_07282766.1| conserved hypothetical protein [... 57.0 9e-07 gi|296171103|ref|ZP_06852556.1| conserved hypothetical protein [... 55.8 2e-06 gi|304310752|ref|YP_003810350.1| Cytochrome P450 51 [gamma prote... 55.5 3e-06 gi|315441829|ref|YP_004074708.1| ferredoxin [Mycobacterium sp. S... 55.5 3e-06 gi|325001060|ref|ZP_08122172.1| ferredoxin [Pseudonocardia sp. P1] 54.3 6e-06 gi|319950411|ref|ZP_08024327.1| hypothetical protein ES5_12560 [... 53.5 1e-05 gi|302530214|ref|ZP_07282556.1| hypothetical protein SSMG_06596 ... 53.5 1e-05 gi|37518572|gb|AAQ91918.1| PhtAc [Mycobacterium vanbaalenii PYR-1] 52.8 2e-05 gi|53803178|ref|YP_115112.1| cytochrome P450 51 [Methylococcus c... 52.4 2e-05 gi|224038320|gb|ACN38279.1| phthalate dioxygenase ferredoxin [My... 52.4 2e-05 gi|254819922|ref|ZP_05224923.1| ferredoxin FdxD_2 [Mycobacterium... 52.4 2e-05 gi|240170426|ref|ZP_04749085.1| ferredoxin FdxD_2 [Mycobacterium... 52.4 2e-05 gi|311741969|ref|ZP_07715779.1| probable ferredoxin [Aeromicrobi... 52.0 3e-05 gi|288920235|ref|ZP_06414549.1| protein of unknown function DUF1... 52.0 3e-05 gi|296268167|ref|YP_003650799.1| hypothetical protein Tbis_0174 ... 52.0 3e-05 >gi|15840178|ref|NP_335215.1| ferredoxin-related protein [Mycobacterium tuberculosis CDC1551] gi|13880332|gb|AAK45029.1| ferredoxin-related protein [Mycobacterium tuberculosis CDC1551] Length=80 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA Sbjct 13 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 72 Query 61 LSIRETGE 68 LSIRETGE Sbjct 73 LSIRETGE 80 >gi|15607903|ref|NP_215277.1| ferredoxin [Mycobacterium tuberculosis H37Rv] gi|31791951|ref|NP_854444.1| ferredoxin [Mycobacterium bovis AF2122/97] gi|121636687|ref|YP_976910.1| putative ferredoxin [Mycobacterium bovis BCG str. Pasteur 1173P2] 72 more sequence titles Length=68 Score = 141 bits (356), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 68/68 (100%), Positives = 68/68 (100%), Gaps = 0/68 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA Sbjct 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 Query 61 LSIRETGE 68 LSIRETGE Sbjct 61 LSIRETGE 68 >gi|340625782|ref|YP_004744234.1| putative ferredoxin [Mycobacterium canettii CIPT 140010059] gi|340003972|emb|CCC43107.1| putative ferredoxin [Mycobacterium canettii CIPT 140010059] Length=68 Score = 130 bits (326), Expect = 9e-29, Method: Compositional matrix adjust. Identities = 63/68 (93%), Positives = 63/68 (93%), Gaps = 0/68 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M YRV DRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEAR VIKHAV ACPTQA Sbjct 1 MSYRVHLDRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARDVIKHAVRACPTQA 60 Query 61 LSIRETGE 68 LSIRETGE Sbjct 61 LSIRETGE 68 >gi|296166491|ref|ZP_06848922.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898103|gb|EFG77678.1| ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=69 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/65 (82%), Positives = 58/65 (90%), Gaps = 0/65 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MG+RVEAD DLCQGHAMCELEAP+YFRVPKRG+VEILDPEPPE+AR I+ AV CPTQA Sbjct 1 MGFRVEADLDLCQGHAMCELEAPDYFRVPKRGKVEILDPEPPEDAREEIERAVDMCPTQA 60 Query 61 LSIRE 65 L IRE Sbjct 61 LFIRE 65 >gi|118616314|ref|YP_904646.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183984901|ref|YP_001853192.1| ferredoxin [Mycobacterium marinum M] gi|118568424|gb|ABL03175.1| ferredoxin [Mycobacterium ulcerans Agy99] gi|183178227|gb|ACC43337.1| ferredoxin [Mycobacterium marinum M] Length=68 Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 50/64 (79%), Positives = 57/64 (90%), Gaps = 0/64 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M YR+EAD DLCQGHAMCELEAP+YFRVPKRG+VEI+DPEPPE+AR I+ AV CPTQA Sbjct 1 MSYRIEADLDLCQGHAMCELEAPDYFRVPKRGKVEIIDPEPPEQARPEIEQAVRMCPTQA 60 Query 61 LSIR 64 LSI+ Sbjct 61 LSIK 64 >gi|342862195|ref|ZP_08718837.1| hypothetical protein MCOL_25016 [Mycobacterium colombiense CECT 3035] gi|342130273|gb|EGT83593.1| hypothetical protein MCOL_25016 [Mycobacterium colombiense CECT 3035] Length=69 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 50/64 (79%), Positives = 57/64 (90%), Gaps = 0/64 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 G+R+EAD DLCQGHAMCELEAP+YFRVPKRG+VEILDPEPPE+AR I+ AV CPTQAL Sbjct 3 GFRIEADLDLCQGHAMCELEAPDYFRVPKRGKVEILDPEPPEDARDEIERAVDMCPTQAL 62 Query 62 SIRE 65 I+E Sbjct 63 FIKE 66 >gi|41406695|ref|NP_959531.1| hypothetical protein MAP0597c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118462716|ref|YP_879983.1| hypothetical protein MAV_0707 [Mycobacterium avium 104] gi|254773646|ref|ZP_05215162.1| hypothetical protein MaviaA2_03075 [Mycobacterium avium subsp. avium ATCC 25291] gi|41395045|gb|AAS02914.1| hypothetical protein MAP_0597c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118164003|gb|ABK64900.1| conserved hypothetical protein [Mycobacterium avium 104] gi|336458359|gb|EGO37337.1| ferredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=69 Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/64 (75%), Positives = 57/64 (90%), Gaps = 0/64 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 G+R+EAD DLCQGHAMCELEAP+YFRVPKRG+VEI+DPEPPE+AR ++ AV CPTQAL Sbjct 3 GFRIEADLDLCQGHAMCELEAPDYFRVPKRGKVEIVDPEPPEDARDEVERAVEMCPTQAL 62 Query 62 SIRE 65 I+E Sbjct 63 FIKE 66 >gi|254818460|ref|ZP_05223461.1| hypothetical protein MintA_00967 [Mycobacterium intracellulare ATCC 13950] Length=69 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 48/64 (75%), Positives = 57/64 (90%), Gaps = 0/64 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 G+R+EAD DLCQGHAMCELEAP+YF+VPKRG+VEILDPEPPE+AR ++ AV CPTQAL Sbjct 3 GFRIEADLDLCQGHAMCELEAPDYFQVPKRGKVEILDPEPPEDARDEVERAVEMCPTQAL 62 Query 62 SIRE 65 I+E Sbjct 63 LIKE 66 >gi|240171677|ref|ZP_04750336.1| hypothetical protein MkanA1_20353 [Mycobacterium kansasii ATCC 12478] Length=67 Score = 103 bits (256), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 48/65 (74%), Positives = 57/65 (88%), Gaps = 0/65 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M YR+EAD DLCQGHAMCELEAP+YFRVPKRG+VEI+D +PPEEAR I+ AV +CPTQA Sbjct 1 MAYRIEADPDLCQGHAMCELEAPDYFRVPKRGKVEIVDAQPPEEARPEIERAVRSCPTQA 60 Query 61 LSIRE 65 L I++ Sbjct 61 LFIKQ 65 >gi|289756851|ref|ZP_06516229.1| ferredoxin [Mycobacterium tuberculosis T85] gi|289712415|gb|EFD76427.1| ferredoxin [Mycobacterium tuberculosis T85] Length=69 Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 51/69 (74%), Positives = 54/69 (79%), Gaps = 1/69 (1%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYF-RVPKRGQVEILDPEPPEEARGVIKHAVWACPTQ 59 MGYRVEADRDLCQGHAMCELEAPEYF P + + P P +A G IKHAVWACPTQ Sbjct 1 MGYRVEADRDLCQGHAMCELEAPEYFPGAPSAARSKSSTPIRPRKAGGGIKHAVWACPTQ 60 Query 60 ALSIRETGE 68 ALSIRETGE Sbjct 61 ALSIRETGE 69 >gi|333992245|ref|YP_004524859.1| ferredoxin [Mycobacterium sp. JDM601] gi|333488213|gb|AEF37605.1| ferredoxin [Mycobacterium sp. JDM601] Length=68 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 47/68 (70%), Positives = 55/68 (81%), Gaps = 0/68 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M +RV+ D DLCQGHAMCELEAP+YFRVPKRG+VEIL+ EPPE R I+ AV ACPT+A Sbjct 1 MAFRVKVDLDLCQGHAMCELEAPDYFRVPKRGKVEILNDEPPESDRRQIEEAVRACPTRA 60 Query 61 LSIRETGE 68 LSI E + Sbjct 61 LSIEEKKD 68 >gi|169628306|ref|YP_001701955.1| putative ferredoxin [Mycobacterium abscessus ATCC 19977] gi|169240273|emb|CAM61301.1| Putative ferredoxin [Mycobacterium abscessus] Length=66 Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 45/65 (70%), Positives = 52/65 (80%), Gaps = 0/65 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M YRV+ D DLCQGHAMCELEAP+YFRVPKRG VEIL+ EPP++AR I+ AV CP +A Sbjct 1 MAYRVDVDTDLCQGHAMCELEAPDYFRVPKRGTVEILNNEPPDDARDEIERAVEECPARA 60 Query 61 LSIRE 65 L I E Sbjct 61 LFITE 65 >gi|120406110|ref|YP_955939.1| hypothetical protein Mvan_5162 [Mycobacterium vanbaalenii PYR-1] gi|48237447|gb|AAT40579.1| putative ferredoxin [Mycobacterium vanbaalenii PYR-1] gi|119958928|gb|ABM15933.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=71 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 45/64 (71%), Positives = 51/64 (80%), Gaps = 0/64 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 GYRV D DLCQGHAMCELEAP+ FRVPKRG VEI DPEPP+E R ++ AV CPT+AL Sbjct 6 GYRVHVDEDLCQGHAMCELEAPDVFRVPKRGVVEITDPEPPDELREAVELAVEMCPTRAL 65 Query 62 SIRE 65 +I E Sbjct 66 TIIE 69 >gi|315442626|ref|YP_004075505.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315260929|gb|ADT97670.1| ferredoxin [Mycobacterium sp. Spyr1] Length=68 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 45/63 (72%), Positives = 51/63 (81%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 YRVE D DLCQGHAMCELEAP+ FRVPKRG VEILD EPP+E R ++ AV CPT+AL+ Sbjct 4 YRVELDEDLCQGHAMCELEAPDVFRVPKRGVVEILDSEPPDELREAVEMAVEMCPTRALT 63 Query 63 IRE 65 I E Sbjct 64 ITE 66 >gi|145222187|ref|YP_001132865.1| hypothetical protein Mflv_1595 [Mycobacterium gilvum PYR-GCK] gi|145214673|gb|ABP44077.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=68 Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 45/63 (72%), Positives = 51/63 (81%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 YRVE D DLCQGHAMCELEAP+ FRVPKRG VEILD EPP+E R ++ AV CPT+AL+ Sbjct 4 YRVELDEDLCQGHAMCELEAPDVFRVPKRGVVEILDSEPPDELREAVEMAVEMCPTRALT 63 Query 63 IRE 65 I E Sbjct 64 ITE 66 >gi|118470271|ref|YP_890091.1| cytochrome P450 [Mycobacterium smegmatis str. MC2 155] gi|118171558|gb|ABK72454.1| cytochrome P450 51 [Mycobacterium smegmatis str. MC2 155] Length=67 Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 44/63 (70%), Positives = 51/63 (81%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 YR+E D DLCQGHAMCELEAP+ FRVPKRG VEILD EPP++ R ++ AV CPT+ALS Sbjct 4 YRIELDEDLCQGHAMCELEAPDVFRVPKRGTVEILDTEPPDDLRDGVEMAVEMCPTRALS 63 Query 63 IRE 65 I E Sbjct 64 IVE 66 >gi|108801546|ref|YP_641743.1| hypothetical protein Mmcs_4583 [Mycobacterium sp. MCS] gi|119870700|ref|YP_940652.1| hypothetical protein Mkms_4671 [Mycobacterium sp. KMS] gi|126437531|ref|YP_001073222.1| hypothetical protein Mjls_4966 [Mycobacterium sp. JLS] gi|108771965|gb|ABG10687.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696789|gb|ABL93862.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237331|gb|ABO00732.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=67 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 43/64 (68%), Positives = 50/64 (79%), Gaps = 0/64 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 YR+E D DLCQGHAMCELEAP+ F VPKRG VEI DPEPP++ R ++ AV CPT+AL Sbjct 3 SYRIELDADLCQGHAMCELEAPDVFSVPKRGIVEITDPEPPDDLREDVERAVDMCPTRAL 62 Query 62 SIRE 65 SI E Sbjct 63 SIVE 66 >gi|325676484|ref|ZP_08156162.1| ferredoxin [Rhodococcus equi ATCC 33707] gi|325552662|gb|EGD22346.1| ferredoxin [Rhodococcus equi ATCC 33707] Length=64 Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 40/62 (65%), Positives = 46/62 (75%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 RVEAD DLCQGHA CE+EAP+ F VPKRG+V +LD PPE R ++ AV CPTQAL I Sbjct 2 RVEADLDLCQGHAACEMEAPDVFTVPKRGKVTVLDANPPESLRADVESAVRYCPTQALRI 61 Query 64 RE 65 E Sbjct 62 VE 63 >gi|111021644|ref|YP_704616.1| ferredoxin [Rhodococcus jostii RHA1] gi|110821174|gb|ABG96458.1| ferredoxin [Rhodococcus jostii RHA1] Length=71 Score = 84.0 bits (206), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 39/61 (64%), Positives = 47/61 (78%), Gaps = 0/61 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 +VEAD DLCQGHA+CE+EAP+ F VPK G+VEILD +PPE R ++ AV CPTQAL Sbjct 1 MKVEADLDLCQGHAVCEMEAPDVFVVPKHGKVEILDTDPPENLRAEVESAVRFCPTQALR 60 Query 63 I 63 I Sbjct 61 I 61 >gi|54024552|ref|YP_118794.1| putative ferredoxin [Nocardia farcinica IFM 10152] gi|54016060|dbj|BAD57430.1| putative ferredoxin [Nocardia farcinica IFM 10152] Length=75 Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 41/62 (67%), Positives = 45/62 (73%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 R+ D DLCQGHAMC+ EAPE FRVPKRGQVEILDP P R + AV CPTQALS+ Sbjct 2 RIVVDLDLCQGHAMCQAEAPEVFRVPKRGQVEILDPAPGPGLRAQVADAVRYCPTQALSL 61 Query 64 RE 65 E Sbjct 62 VE 63 >gi|312138816|ref|YP_004006152.1| hypothetical protein REQ_13830 [Rhodococcus equi 103S] gi|311888155|emb|CBH47467.1| conserved hypothetical protein [Rhodococcus equi 103S] Length=64 Score = 82.4 bits (202), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/62 (63%), Positives = 46/62 (75%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 RVEAD DLCQGHA CE+EAP+ F VPKRG+V +L+ PPE R ++ AV CPTQAL I Sbjct 2 RVEADLDLCQGHAACEMEAPDVFTVPKRGKVTVLEANPPESLRADVESAVRYCPTQALRI 61 Query 64 RE 65 E Sbjct 62 VE 63 >gi|226364181|ref|YP_002781963.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] gi|226242670|dbj|BAH53018.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] Length=71 Score = 80.9 bits (198), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 38/60 (64%), Positives = 46/60 (77%), Gaps = 0/60 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 +VEAD DLCQGHA+CE+EAP+ F VPK G+VEIL +PPE R ++ AV CPTQAL I Sbjct 2 KVEADLDLCQGHAVCEMEAPDVFVVPKHGKVEILHSDPPEHLRAEVESAVRFCPTQALRI 61 >gi|229492740|ref|ZP_04386541.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229320399|gb|EEN86219.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=65 Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/63 (64%), Positives = 44/63 (70%), Gaps = 0/63 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M VE D DLCQGHA CELEAPE F VPKRG+V +LD +PPE RG + AV CPT A Sbjct 1 MIMHVEVDLDLCQGHAACELEAPEIFVVPKRGKVSLLDSDPPESLRGEAEMAVRYCPTGA 60 Query 61 LSI 63 L I Sbjct 61 LRI 63 >gi|254818474|ref|ZP_05223475.1| ferredoxin [Mycobacterium intracellulare ATCC 13950] Length=75 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/67 (53%), Positives = 44/67 (66%), Gaps = 0/67 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 M +E D DLCQGHAMCELEAP++FRVP RG EIL + ++ A WACP +A Sbjct 1 MSAHIEVDLDLCQGHAMCELEAPQHFRVPHRGTAEILTAHAEDTDLPAVERAEWACPNRA 60 Query 61 LSIRETG 67 L++R G Sbjct 61 LTVRRAG 67 >gi|226306863|ref|YP_002766823.1| 3Fe-4S ferredoxin [Rhodococcus erythropolis PR4] gi|226185980|dbj|BAH34084.1| 3Fe-4S ferredoxin [Rhodococcus erythropolis PR4] Length=63 Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 39/59 (67%), Positives = 43/59 (73%), Gaps = 0/59 (0%) Query 5 VEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 VE D DLCQGHA CELEAPE F VPKRG+V +LD +PPE RG + AV CPT AL I Sbjct 3 VEVDLDLCQGHAACELEAPEIFVVPKRGKVSLLDSDPPESLRGEAEMAVRYCPTGALRI 61 >gi|262203705|ref|YP_003274913.1| hypothetical protein Gbro_3842 [Gordonia bronchialis DSM 43247] gi|262087052|gb|ACY23020.1| protein of unknown function DUF1271 [Gordonia bronchialis DSM 43247] Length=65 Score = 70.1 bits (170), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 37/65 (57%), Positives = 42/65 (65%), Gaps = 1/65 (1%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 R+E D DLCQGH MCE+EAPE FR VEILD EP E R ++ AV CPTQAL I Sbjct 2 RIEVDLDLCQGHGMCEMEAPEVFRA-HSDHVEILDKEPDEGLRPEVEAAVMYCPTQALRI 60 Query 64 RETGE 68 + E Sbjct 61 VDDNE 65 >gi|343927846|ref|ZP_08767314.1| putative 3Fe-4S ferredoxin [Gordonia alkanivorans NBRC 16433] gi|343762487|dbj|GAA14240.1| putative 3Fe-4S ferredoxin [Gordonia alkanivorans NBRC 16433] Length=65 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 37/65 (57%), Positives = 40/65 (62%), Gaps = 1/65 (1%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 RVE D DLCQGH MCELEAPE F VEILD P E R ++ AV CPTQAL + Sbjct 2 RVEVDLDLCQGHGMCELEAPEVF-AAHMDHVEILDANPDESRRAEVEAAVQYCPTQALRL 60 Query 64 RETGE 68 E E Sbjct 61 IEDDE 65 >gi|13591777|gb|AAK31349.1|AF350429_2 putative ferredoxin [Nocardioides sp. CF8] Length=63 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 31/62 (50%), Positives = 40/62 (65%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 ++ AD D C+G MCE APE+F V GQV +LD P EE R +K AV ACP ALS+ Sbjct 2 KIVADYDKCEGLGMCEAMAPEFFEVQDEGQVGVLDEHPDEEHRTGLKAAVDACPVLALSL 61 Query 64 RE 65 ++ Sbjct 62 KD 63 >gi|326384237|ref|ZP_08205919.1| hypothetical protein SCNU_14936 [Gordonia neofelifaecis NRRL B-59395] gi|326197102|gb|EGD54294.1| hypothetical protein SCNU_14936 [Gordonia neofelifaecis NRRL B-59395] Length=63 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 33/62 (54%), Positives = 38/62 (62%), Gaps = 1/62 (1%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 RV D DLCQGH MCE+EAP+ F R V +LD P E R ++ AV CPTQAL I Sbjct 2 RVVVDLDLCQGHGMCEMEAPDVFE-AGRDAVTLLDETPDESRRAEVEAAVRYCPTQALKI 60 Query 64 RE 65 E Sbjct 61 VE 62 >gi|296164106|ref|ZP_06846725.1| probable ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900546|gb|EFG79933.1| probable ferredoxin [Mycobacterium parascrofulaceum ATCC BAA-614] Length=63 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 27/63 (43%), Positives = 40/63 (64%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 ++ DR+ C MCE AP++F V GQ+ I++PEPPE R +I+ AV CPT AL+ Sbjct 1 MKIRVDRNRCSSIGMCEGLAPDFFEVRHDGQLNIVNPEPPECHRSLIEEAVSCCPTGALA 60 Query 63 IRE 65 + + Sbjct 61 VED 63 >gi|256371368|ref|YP_003109192.1| ferredoxin (3Fe-4S) [Acidimicrobium ferrooxidans DSM 10331] gi|256007952|gb|ACU53519.1| ferredoxin (3Fe-4S) [Acidimicrobium ferrooxidans DSM 10331] Length=63 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 26/60 (44%), Positives = 37/60 (62%), Gaps = 0/60 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 R+E D D CQ +A+C+ AP F V G + +LD P E+ R ++ A ACPTQA++I Sbjct 2 RIEVDFDKCQSNAVCQAVAPAIFEVRDDGYLYVLDETPSEDLRALVDQAARACPTQAITI 61 >gi|108801618|ref|YP_641815.1| hypothetical protein Mmcs_4655 [Mycobacterium sp. MCS] gi|119870772|ref|YP_940724.1| hypothetical protein Mkms_4743 [Mycobacterium sp. KMS] gi|126437602|ref|YP_001073293.1| hypothetical protein Mjls_5038 [Mycobacterium sp. JLS] gi|108772037|gb|ABG10759.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696861|gb|ABL93934.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237402|gb|ABO00803.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=64 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 36/61 (60%), Gaps = 1/61 (1%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPK-RGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 + D DLC+GH C + AP+ F +P QV +LDP+PP+ RG + A CP QAL Sbjct 2 HITVDYDLCEGHGQCLMAAPDVFDLPDGSDQVVVLDPDPPQSERGAVVRAAAMCPAQALR 61 Query 63 I 63 + Sbjct 62 V 62 >gi|326332421|ref|ZP_08198698.1| ferredoxin-related protein [Nocardioidaceae bacterium Broad-1] gi|325949789|gb|EGD41852.1| ferredoxin-related protein [Nocardioidaceae bacterium Broad-1] Length=64 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 25/60 (42%), Positives = 38/60 (64%), Gaps = 0/60 (0%) Query 5 VEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSIR 64 +EAD+ +C+G MCE +A YF++ G VE+L E P+ R +K AV +CP AL ++ Sbjct 4 IEADKTVCEGIGMCEAQADTYFQIGDDGLVEVLSDEVPDPDRAYVKAAVDSCPVSALRLK 63 >gi|226349655|ref|YP_002776769.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] gi|226245570|dbj|BAH55917.1| 3Fe-4S ferredoxin [Rhodococcus opacus B4] Length=63 Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 27/63 (43%), Positives = 35/63 (56%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 R+ D + C MCE APE+F V G + ILD P + R +I+ AV CPT ALS Sbjct 1 MRIVLDENRCSSTGMCEATAPEFFEVGDDGALHILDANPADCHRALIEEAVGVCPTDALS 60 Query 63 IRE 65 I + Sbjct 61 IED 63 >gi|324999447|ref|ZP_08120559.1| 3Fe-4S ferredoxin [Pseudonocardia sp. P1] Length=64 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 28/62 (46%), Positives = 37/62 (60%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 RV D D C G +CE APE+F V G + +L E E+ R ++ AV +CPT+ALSI Sbjct 2 RVVVDYDKCTGLGLCESLAPEFFEVQDDGSLTLLQSEAGEDQRAELEEAVRSCPTEALSI 61 Query 64 RE 65 E Sbjct 62 EE 63 >gi|302530424|ref|ZP_07282766.1| conserved hypothetical protein [Streptomyces sp. AA4] gi|302439319|gb|EFL11135.1| conserved hypothetical protein [Streptomyces sp. AA4] Length=63 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 28/61 (46%), Positives = 35/61 (58%), Gaps = 0/61 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 R+EAD + C G MCE AP++F V G V +LD P EE R + AV ACP AL Sbjct 1 MRIEADLNKCDGLGMCEAMAPDFFEVGDEGTVVVLDESPGEEHRTDLAAAVDACPVLALK 60 Query 63 I 63 + Sbjct 61 L 61 >gi|296171103|ref|ZP_06852556.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295894359|gb|EFG74112.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=64 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/61 (45%), Positives = 36/61 (60%), Gaps = 1/61 (1%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRG-QVEILDPEPPEEARGVIKHAVWACPTQALS 62 R+ D DLC+GH C + AP+ F +P QV +L+PEPPE R + A CP QA+ Sbjct 2 RIAVDYDLCEGHGQCLMAAPDVFDIPDGAEQVVVLEPEPPEADRERVVRAAAMCPAQAIR 61 Query 63 I 63 I Sbjct 62 I 62 >gi|304310752|ref|YP_003810350.1| Cytochrome P450 51 [gamma proteobacterium HdN1] gi|301796485|emb|CBL44693.1| Cytochrome P450 51 [gamma proteobacterium HdN1] Length=585 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 29/63 (47%), Positives = 34/63 (54%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 + V DR LCQGHA+C EAPE FRV + G IL E +A CP QA+S Sbjct 510 FSVRVDRQLCQGHAICMGEAPELFRVDQNGYNHILQAHLDSEQLQKALNAAKYCPNQAIS 569 Query 63 IRE 65 I E Sbjct 570 IHE 572 >gi|315441829|ref|YP_004074708.1| ferredoxin [Mycobacterium sp. Spyr1] gi|315260132|gb|ADT96873.1| ferredoxin [Mycobacterium sp. Spyr1] Length=66 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 38/63 (61%), Gaps = 0/63 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MG ++A R++CQG+A C + AP+YF + RG VE+ E P R ++ A +CP A Sbjct 1 MGGVIKAKREVCQGYANCVVAAPDYFDIDDRGLVEVRKTEVPSADRTRVEEAARSCPVAA 60 Query 61 LSI 63 L + Sbjct 61 LEV 63 >gi|325001060|ref|ZP_08122172.1| ferredoxin [Pseudonocardia sp. P1] Length=63 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 25/62 (41%), Positives = 35/62 (57%), Gaps = 0/62 (0%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSI 63 R+ D D C GH +CE A + F V G V++LD P E R ++ AV CPT+AL + Sbjct 2 RIHLDVDACTGHGVCEALAEDIFEVNDDGYVDLLDATPSEHRREAVQEAVAQCPTRALRL 61 Query 64 RE 65 + Sbjct 62 TD 63 >gi|319950411|ref|ZP_08024327.1| hypothetical protein ES5_12560 [Dietzia cinnamea P4] gi|319435927|gb|EFV91131.1| hypothetical protein ES5_12560 [Dietzia cinnamea P4] Length=67 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 29/62 (47%), Positives = 38/62 (62%), Gaps = 2/62 (3%) Query 4 RVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDP--EPPEEARGVIKHAVWACPTQAL 61 RVE D DLCQGHA C+ EAP++F V K + + E PE+ ++ AV CPTQAL Sbjct 3 RVEVDFDLCQGHAECQAEAPDWFTVGKGAEAKARAKRGEIPEDQIDAVRDAVKYCPTQAL 62 Query 62 SI 63 + Sbjct 63 RL 64 >gi|302530214|ref|ZP_07282556.1| hypothetical protein SSMG_06596 [Streptomyces sp. AA4] gi|302439109|gb|EFL10925.1| hypothetical protein SSMG_06596 [Streptomyces sp. AA4] Length=63 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/63 (40%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 ++ AD C+G MCE A ++F V + G V++LD PPE R + AV ACP AL Sbjct 1 MKIVADHGKCEGLGMCEAMADQFFEVGEDGVVQVLDETPPEADRQFVDAAVRACPVAALR 60 Query 63 IRE 65 +++ Sbjct 61 LQD 63 >gi|37518572|gb|AAQ91918.1| PhtAc [Mycobacterium vanbaalenii PYR-1] Length=66 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/63 (39%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MG ++A R++CQG+A C + A +YF + RG VE+ E P R ++ A +CP A Sbjct 1 MGGVIKAKREVCQGYANCVVAAEDYFDIDDRGLVEVRKTEVPSADRTRVEEAARSCPVAA 60 Query 61 LSI 63 L + Sbjct 61 LEV 63 >gi|53803178|ref|YP_115112.1| cytochrome P450 51 [Methylococcus capsulatus str. Bath] gi|53756939|gb|AAU91230.1| cytochrome P450 51 [Methylococcus capsulatus str. Bath] Length=551 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/62 (42%), Positives = 34/62 (55%), Gaps = 0/62 (0%) Query 2 GYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 +RV DRDLC+GH C EAPE FRV + G++ +L P G A CP +A+ Sbjct 471 AFRVTVDRDLCKGHGNCMAEAPEIFRVDEDGRLTLLSETPDPVLVGAALAAERFCPARAI 530 Query 62 SI 63 I Sbjct 531 KI 532 >gi|224038320|gb|ACN38279.1| phthalate dioxygenase ferredoxin [Mycobacterium sp. CH1] Length=66 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/63 (39%), Positives = 37/63 (59%), Gaps = 0/63 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 MG ++A R++CQG+A C + A +YF + RG VE+ E P R ++ A +CP A Sbjct 1 MGGVIKAKREVCQGYANCVVAAEDYFDIDDRGLVEVRKTEVPSADRTRVEEAARSCPVAA 60 Query 61 LSI 63 L + Sbjct 61 LEV 63 >gi|254819922|ref|ZP_05224923.1| ferredoxin FdxD_2 [Mycobacterium intracellulare ATCC 13950] Length=64 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/61 (43%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 +V + DLC+ + +C L APE F + VEIL PEP E + AV ACP QAL Sbjct 1 MKVTFEPDLCEANGLCVLAAPEVFELIDDDVVEILFPEPAPEVESAVTDAVIACPKQALR 60 Query 63 I 63 + Sbjct 61 L 61 >gi|240170426|ref|ZP_04749085.1| ferredoxin FdxD_2 [Mycobacterium kansasii ATCC 12478] Length=63 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/61 (41%), Positives = 36/61 (60%), Gaps = 0/61 (0%) Query 3 YRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALS 62 R+E D DLC+ +A+C APE FRV + +L PE E +++ AV CP QA+S Sbjct 1 MRIEVDWDLCESNAVCMGIAPEVFRVGDDDMLTVLQPEVTPENEALVREAVRQCPRQAIS 60 Query 63 I 63 + Sbjct 61 L 61 >gi|311741969|ref|ZP_07715779.1| probable ferredoxin [Aeromicrobium marinum DSM 15272] gi|311314462|gb|EFQ84369.1| probable ferredoxin [Aeromicrobium marinum DSM 15272] Length=64 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/61 (40%), Positives = 34/61 (56%), Gaps = 0/61 (0%) Query 5 VEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQALSIR 64 + DRD C+G MCE A +YF V +++LD E PE R + A+ ACP AL + Sbjct 4 IHVDRDKCEGLGMCEAMANDYFEVGDDDVLKVLDGEVPESDRAHVHSAIQACPVLALRLE 63 Query 65 E 65 + Sbjct 64 D 64 >gi|288920235|ref|ZP_06414549.1| protein of unknown function DUF1271 [Frankia sp. EUN1f] gi|288348339|gb|EFC82602.1| protein of unknown function DUF1271 [Frankia sp. EUN1f] Length=96 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 26/65 (40%), Positives = 37/65 (57%), Gaps = 0/65 (0%) Query 1 MGYRVEADRDLCQGHAMCELEAPEYFRVPKRGQVEILDPEPPEEARGVIKHAVWACPTQA 60 + RV D LC+ +A+C AP F + + ILD EP E+ R +K AV ACP QA Sbjct 31 VSMRVVVDFKLCESNALCVGIAPSVFELDDNDYLVILDEEPGEDLRADLKAAVAACPKQA 90 Query 61 LSIRE 65 +S+ + Sbjct 91 ISLAD 95 >gi|296268167|ref|YP_003650799.1| hypothetical protein Tbis_0174 [Thermobispora bispora DSM 43833] gi|296090954|gb|ADG86906.1| protein of unknown function DUF1271 [Thermobispora bispora DSM 43833] Length=73 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/65 (39%), Positives = 38/65 (59%), Gaps = 1/65 (1%) Query 3 YRVEADRDLCQGHAMCELEAPEYF-RVPKRGQVEILDPEPPEEARGVIKHAVWACPTQAL 61 +++AD C G MC + PE F + + G V +L P+PP E +++ AV CP+ AL Sbjct 1 MKIKADTGRCIGAGMCVMTLPEVFDQSEEDGTVVVLAPDPPGELHALVRRAVTLCPSGAL 60 Query 62 SIRET 66 S+ ET Sbjct 61 SLEET 65 Lambda K H 0.319 0.137 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129098386704 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40