BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0771
Length=144
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607911|ref|NP_215285.1| 4-carboxymuconolactone decarboxylas... 297 4e-79
gi|148821977|ref|YP_001286731.1| 4-carboxymuconolactone decarbox... 295 2e-78
gi|289446336|ref|ZP_06436080.1| 4-carboxymuconolactone decarboxy... 242 1e-62
gi|108801538|ref|YP_641735.1| carboxymuconolactone decarboxylase... 192 2e-47
gi|120406102|ref|YP_955931.1| carboxymuconolactone decarboxylase... 187 5e-46
gi|145222195|ref|YP_001132873.1| carboxymuconolactone decarboxyl... 186 7e-46
gi|315442634|ref|YP_004075513.1| protein, gamma-carboxymuconolac... 186 8e-46
gi|118468348|ref|YP_890083.1| hypothetical protein MSMEG_5856 [M... 184 3e-45
gi|240171685|ref|ZP_04750344.1| hypothetical protein MkanA1_2039... 183 6e-45
gi|183984893|ref|YP_001853184.1| 4-carboxymuconolactone decarbox... 183 8e-45
gi|41406703|ref|NP_959539.1| hypothetical protein MAP0605 [Mycob... 180 5e-44
gi|118616321|ref|YP_904653.1| 4-carboxymuconolactone decarboxyla... 180 7e-44
gi|333992237|ref|YP_004524851.1| 4-carboxymuconolactone decarbox... 179 1e-43
gi|254773654|ref|ZP_05215170.1| hypothetical protein MaviaA2_031... 178 2e-43
gi|336458367|gb|EGO37345.1| uncharacterized protein, gamma-carbo... 176 7e-43
gi|342862187|ref|ZP_08718829.1| hypothetical protein MCOL_24976 ... 165 2e-39
gi|169628314|ref|YP_001701963.1| 4-carboxymuconolactone decarbox... 164 5e-39
gi|254818452|ref|ZP_05223453.1| hypothetical protein MintA_00927... 161 3e-38
gi|296166483|ref|ZP_06848914.1| 4-carboxymuconolactone decarboxy... 161 3e-38
gi|226306872|ref|YP_002766832.1| 4-carboxymuconolactone decarbox... 153 1e-35
gi|229492741|ref|ZP_04386542.1| 4-carboxymuconolactone decarboxy... 146 1e-33
gi|111021632|ref|YP_704604.1| 4-carboxymuconolactone decarboxyla... 135 3e-30
gi|226364168|ref|YP_002781950.1| hypothetical protein ROP_47580 ... 134 6e-30
gi|326331683|ref|ZP_08197971.1| 4-carboxymuconolactone decarboxy... 130 7e-29
gi|326384245|ref|ZP_08205927.1| carboxymuconolactone decarboxyla... 128 2e-28
gi|319950419|ref|ZP_08024335.1| hypothetical protein ES5_12600 [... 124 6e-27
gi|312138807|ref|YP_004006143.1| 4-carboxymuconolactone decarbox... 123 9e-27
gi|262203713|ref|YP_003274921.1| carboxymuconolactone decarboxyl... 107 8e-22
gi|343927854|ref|ZP_08767322.1| hypothetical protein GOALK_097_0... 97.8 5e-19
gi|271967748|ref|YP_003341944.1| carboxymuconolactone decarboxyl... 94.0 8e-18
gi|54024549|ref|YP_118791.1| hypothetical protein nfa25800 [Noca... 88.6 3e-16
gi|254481357|ref|ZP_05094602.1| carboxymuconolactone decarboxyla... 82.8 2e-14
gi|254818538|ref|ZP_05223539.1| hypothetical protein MintA_01371... 76.6 1e-12
gi|336458841|gb|EGO37798.1| uncharacterized protein, gamma-carbo... 74.7 4e-12
gi|342858470|ref|ZP_08715125.1| hypothetical protein MCOL_06331 ... 74.3 5e-12
gi|118463997|ref|YP_882730.1| hypothetical protein MAV_3552 [Myc... 73.2 1e-11
gi|41408879|ref|NP_961715.1| hypothetical protein MAP2781 [Mycob... 73.2 1e-11
gi|318059963|ref|ZP_07978686.1| hypothetical protein SSA3_18611 ... 72.8 2e-11
gi|254775994|ref|ZP_05217510.1| hypothetical protein MaviaA2_151... 71.6 4e-11
gi|302519308|ref|ZP_07271650.1| conserved hypothetical protein [... 71.6 4e-11
gi|111223414|ref|YP_714208.1| hypothetical protein FRAAL4011 [Fr... 71.2 4e-11
gi|296169452|ref|ZP_06851072.1| 4-carboxymuconolactone decarboxy... 70.9 6e-11
gi|312195890|ref|YP_004015951.1| carboxymuconolactone decarboxyl... 68.2 4e-10
gi|158313278|ref|YP_001505786.1| carboxymuconolactone decarboxyl... 65.5 2e-09
gi|158316001|ref|YP_001508509.1| carboxymuconolactone decarboxyl... 65.1 3e-09
gi|318062510|ref|ZP_07981231.1| hypothetical protein SSA3_31537 ... 64.7 4e-09
gi|302517297|ref|ZP_07269639.1| conserved hypothetical protein [... 64.7 4e-09
gi|295840675|ref|ZP_06827607.1| carboxymuconolactone decarboxyla... 64.7 5e-09
gi|333989054|ref|YP_004521668.1| hypothetical protein JDM601_041... 64.3 6e-09
gi|126437743|ref|YP_001073434.1| carboxymuconolactone decarboxyl... 63.5 1e-08
>gi|15607911|ref|NP_215285.1| 4-carboxymuconolactone decarboxylase [Mycobacterium tuberculosis
H37Rv]
gi|15840186|ref|NP_335223.1| hypothetical protein MT0795 [Mycobacterium tuberculosis CDC1551]
gi|31791959|ref|NP_854452.1| 4-carboxymuconolactone decarboxylase [Mycobacterium bovis AF2122/97]
65 more sequence titles
Length=144
Score = 297 bits (760), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%)
Query 1 MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT
Sbjct 1 MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA
Sbjct 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
Query 121 ENGSLPDTKANVAEVLAKESGKSS 144
ENGSLPDTKANVAEVLAKESGKSS
Sbjct 121 ENGSLPDTKANVAEVLAKESGKSS 144
>gi|148821977|ref|YP_001286731.1| 4-carboxymuconolactone decarboxylase [Mycobacterium tuberculosis
F11]
gi|167968872|ref|ZP_02551149.1| hypothetical 4-carboxymuconolactone decarboxylase cmd [Mycobacterium
tuberculosis H37Ra]
gi|254549739|ref|ZP_05140186.1| 4-carboxymuconolactone decarboxylase cmd [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
10 more sequence titles
Length=143
Score = 295 bits (754), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 143/143 (100%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA
Sbjct 1 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 60
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE 121
QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE
Sbjct 61 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE 120
Query 122 NGSLPDTKANVAEVLAKESGKSS 144
NGSLPDTKANVAEVLAKESGKSS
Sbjct 121 NGSLPDTKANVAEVLAKESGKSS 143
>gi|289446336|ref|ZP_06436080.1| 4-carboxymuconolactone decarboxylase cmd [Mycobacterium tuberculosis
CPHL_A]
gi|289419294|gb|EFD16495.1| 4-carboxymuconolactone decarboxylase cmd [Mycobacterium tuberculosis
CPHL_A]
Length=126
Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%)
Query 26 GEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDE 85
GEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDE
Sbjct 8 GEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDE 67
Query 86 LRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAENGSLPDTKANVAEVLAKESGKSS 144
LRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAENGSLPDTKANVAEVLAKESGKSS
Sbjct 68 LRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAENGSLPDTKANVAEVLAKESGKSS 126
>gi|108801538|ref|YP_641735.1| carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119870692|ref|YP_940644.1| carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126437523|ref|YP_001073214.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|108771957|gb|ABG10679.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. MCS]
gi|119696781|gb|ABL93854.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. KMS]
gi|126237323|gb|ABO00724.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=146
Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 86/142 (61%), Positives = 110/142 (78%), Gaps = 0/142 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
MDELRR GL KMNEVY W+MPDMPG++FALT DHLFG IW+RPGLSMR++RM + +TA
Sbjct 1 MDELRRKGLAKMNEVYGWEMPDMPGDYFALTADHLFGTIWSRPGLSMREKRMMTLTCVTA 60
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE 121
G +DL E+QVNA L N EL+ +EL+E+A+F+THY+GFPLGS+L+ + +VA +RK+AA
Sbjct 61 LGITDLAEIQVNAALANGELSEEELKEMAIFLTHYLGFPLGSKLDGVVTKVAGQRKKAAA 120
Query 122 NGSLPDTKANVAEVLAKESGKS 143
G+ D KANV L SG S
Sbjct 121 KGAGEDKKANVNAALNMHSGSS 142
>gi|120406102|ref|YP_955931.1| carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
gi|119958920|gb|ABM15925.1| Carboxymuconolactone decarboxylase [Mycobacterium vanbaalenii
PYR-1]
Length=152
Score = 187 bits (475), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 86/140 (62%), Positives = 110/140 (79%), Gaps = 1/140 (0%)
Query 3 DELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
DELRR GL+KMNEVY W+MPD+ G+ ++ LTV+HLFG IWTRPGLSMRD+RM + V+TA
Sbjct 4 DELRRKGLEKMNEVYGWEMPDVQGDPYYDLTVEHLFGSIWTRPGLSMRDKRMMTLTVVTA 63
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE 121
G SDL E+QVNA LHN+ELT EL+E+AVF+THY+GFPLGS+L+ + +VA +RK+AAE
Sbjct 64 LGNSDLAEIQVNAALHNEELTEHELKEMAVFLTHYLGFPLGSKLDGVVSKVAKQRKKAAE 123
Query 122 NGSLPDTKANVAEVLAKESG 141
G + KANV + SG
Sbjct 124 RGEGENKKANVNAAVQMHSG 143
>gi|145222195|ref|YP_001132873.1| carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
gi|145214681|gb|ABP44085.1| Carboxymuconolactone decarboxylase [Mycobacterium gilvum PYR-GCK]
Length=149
Score = 186 bits (473), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/143 (61%), Positives = 112/143 (79%), Gaps = 1/143 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTR GLSMRD+R+ +A +T
Sbjct 3 MDELRRKGLEKMNEVYGWEMPNIEGDPYFDLTVDHLFGTIWTREGLSMRDKRLLTLAAVT 62
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G SDL E+QVNA LHN+E T +EL+E+A+F+THY+GFPLGS+L+ A+ +V RK+AA
Sbjct 63 AVGNSDLAEIQVNAALHNEEFTAEELKEVALFLTHYLGFPLGSKLDGAVSKVIRNRKKAA 122
Query 121 ENGSLPDTKANVAEVLAKESGKS 143
+ GS D KANV + SGK+
Sbjct 123 DKGSGEDRKANVNAAVKMHSGKT 145
>gi|315442634|ref|YP_004075513.1| protein, gamma-carboxymuconolactone decarboxylase subunit like
protein [Mycobacterium sp. Spyr1]
gi|315260937|gb|ADT97678.1| uncharacterized protein, gamma-carboxymuconolactone decarboxylase
subunit like protein [Mycobacterium sp. Spyr1]
Length=147
Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 86/143 (61%), Positives = 112/143 (79%), Gaps = 1/143 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTR GLSMRD+R+ +A +T
Sbjct 1 MDELRRKGLEKMNEVYGWEMPNIEGDPYFDLTVDHLFGTIWTREGLSMRDKRLLTLAAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G SDL E+QVNA LHN+E T +EL+E+A+F+THY+GFPLGS+L+ A+ +V RK+AA
Sbjct 61 AVGNSDLAEIQVNAALHNEEFTAEELKEVALFLTHYLGFPLGSKLDGAVSKVIRNRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESGKS 143
+ GS D KANV + SGK+
Sbjct 121 DKGSGEDRKANVNAAVKMHSGKT 143
>gi|118468348|ref|YP_890083.1| hypothetical protein MSMEG_5856 [Mycobacterium smegmatis str.
MC2 155]
gi|118169635|gb|ABK70531.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
smegmatis str. MC2 155]
Length=151
Score = 184 bits (468), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/145 (60%), Positives = 112/145 (78%), Gaps = 5/145 (3%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTR GLSMR++R+ +A +T
Sbjct 1 MDELRRKGLEKMNEVYGWEMPNIEGDPYFDLTVDHLFGTIWTREGLSMREKRLLTLASVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G SDL E+QVNA LHN+E T+DEL+E+AVF+THY+GFPLGS+L+ A+ +VA RK+AA
Sbjct 61 AVGNSDLAEIQVNAALHNEEFTVDELKEVAVFLTHYLGFPLGSKLDGAVSKVARNRKKAA 120
Query 121 ENGSLPDT----KANVAEVLAKESG 141
E G DT +ANV + SG
Sbjct 121 EKGEREDTAEKRRANVNAAVKMHSG 145
>gi|240171685|ref|ZP_04750344.1| hypothetical protein MkanA1_20393 [Mycobacterium kansasii ATCC
12478]
Length=145
Score = 183 bits (465), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 86/144 (60%), Positives = 109/144 (76%), Gaps = 1/144 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GLDKMNEVY W+MP++ G+ +F LTVDHLFG +WTRPGLSMRD+R+ + +T
Sbjct 1 MDELRRKGLDKMNEVYGWEMPNIEGDAYFDLTVDHLFGTVWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS N A++ V A+RK+AA
Sbjct 61 AIGNRDLAEIQINAALLNAELTETELKEMAVFLTHYLGFPLGSAFNGAVDTVVARRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESGKSS 144
G+ D KANV L SGK++
Sbjct 121 AKGADEDKKANVDAALKMHSGKAA 144
>gi|183984893|ref|YP_001853184.1| 4-carboxymuconolactone decarboxylase [Mycobacterium marinum M]
gi|183178219|gb|ACC43329.1| 4-carboxymuconolactone decarboxylase [Mycobacterium marinum M]
Length=145
Score = 183 bits (464), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/141 (62%), Positives = 107/141 (76%), Gaps = 1/141 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GLDKMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRDRR+ + +T
Sbjct 1 MDELRRKGLDKMNEVYGWEMPNIEGDAYFDLTVDHLFGTIWTRPGLSMRDRRLMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V A+RK+AA
Sbjct 61 AIGNRDLAEIQINAALLNGELTEAELKEMAVFLTHYLGFPLGSGLNGAVDTVVARRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESG 141
G+ D K NV + L SG
Sbjct 121 AKGAGEDKKGNVDDALKMHSG 141
>gi|41406703|ref|NP_959539.1| hypothetical protein MAP0605 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118465343|ref|YP_879991.1| hypothetical protein MAV_0716 [Mycobacterium avium 104]
gi|41395053|gb|AAS02922.1| hypothetical protein MAP_0605 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118166630|gb|ABK67527.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
avium 104]
Length=146
Score = 180 bits (457), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 86/142 (61%), Positives = 107/142 (76%), Gaps = 1/142 (0%)
Query 1 MMDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVL 59
MMDE RR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +
Sbjct 1 MMDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAV 60
Query 60 TAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQA 119
TA G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V AKR++A
Sbjct 61 TAIGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKA 120
Query 120 AENGSLPDTKANVAEVLAKESG 141
A G+ D KANV L SG
Sbjct 121 AAKGAGEDKKANVDAALKMHSG 142
>gi|118616321|ref|YP_904653.1| 4-carboxymuconolactone decarboxylase [Mycobacterium ulcerans
Agy99]
gi|118568431|gb|ABL03182.1| 4-carboxymuconolactone decarboxylase [Mycobacterium ulcerans
Agy99]
Length=145
Score = 180 bits (456), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/141 (61%), Positives = 106/141 (76%), Gaps = 1/141 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRR GLDKMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRDRR+ + +T
Sbjct 1 MDELRRKGLDKMNEVYGWEMPNIEGDAYFDLTVDHLFGTIWTRPGLSMRDRRLMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA N ELT EL+E+AVF+THY+GFPLGS LN A++ V A+RK+AA
Sbjct 61 AIGNRDLAEIQINAAPLNGELTEAELKEMAVFLTHYLGFPLGSGLNGAVDTVVARRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESG 141
G+ D K NV + L SG
Sbjct 121 AKGAGEDKKGNVDDALKMHSG 141
>gi|333992237|ref|YP_004524851.1| 4-carboxymuconolactone decarboxylase [Mycobacterium sp. JDM601]
gi|333488205|gb|AEF37597.1| 4-carboxymuconolactone decarboxylase [Mycobacterium sp. JDM601]
Length=142
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/141 (60%), Positives = 106/141 (76%), Gaps = 1/141 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELRRTGL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDELRRTGLEKMNEVYGWEMPNIEGDPYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G +L E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V A+RK+AA
Sbjct 61 AIGNRNLAEIQINAALLNGELTEAELKEMAVFVTHYLGFPLGSALNGAVDAVVARRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESG 141
G D KANV + G
Sbjct 121 AKGQAEDKKANVDAAVKMHGG 141
>gi|254773654|ref|ZP_05215170.1| hypothetical protein MaviaA2_03115 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=145
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/141 (61%), Positives = 106/141 (76%), Gaps = 1/141 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDE RR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V AKR++AA
Sbjct 61 AIGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKAA 120
Query 121 ENGSLPDTKANVAEVLAKESG 141
G+ D KANV L SG
Sbjct 121 AKGAGEDKKANVDAALKMHSG 141
>gi|336458367|gb|EGO37345.1| uncharacterized protein, gamma-carboxymuconolactone decarboxylase
subunit like protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=145
Score = 176 bits (447), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 84/141 (60%), Positives = 105/141 (75%), Gaps = 1/141 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDE RR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDERRRKGLEKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V AKR++A
Sbjct 61 AIGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRRKAV 120
Query 121 ENGSLPDTKANVAEVLAKESG 141
G+ D KANV L SG
Sbjct 121 AKGAGEDKKANVDAALKMHSG 141
>gi|342862187|ref|ZP_08718829.1| hypothetical protein MCOL_24976 [Mycobacterium colombiense CECT
3035]
gi|342130265|gb|EGT83585.1| hypothetical protein MCOL_24976 [Mycobacterium colombiense CECT
3035]
Length=142
Score = 165 bits (418), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/142 (62%), Positives = 106/142 (75%), Gaps = 1/142 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELR GL KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDELRSKGLAKMNEVYGWEMPNIEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V AKRK+AA
Sbjct 61 AVGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESGK 142
GS D KANV L SG+
Sbjct 121 AKGSGEDKKANVDAALKMHSGE 142
>gi|169628314|ref|YP_001701963.1| 4-carboxymuconolactone decarboxylase [Mycobacterium abscessus
ATCC 19977]
gi|169240281|emb|CAM61309.1| Possible 4-carboxymuconolactone decarboxylase [Mycobacterium
abscessus]
Length=137
Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 72/119 (61%), Positives = 93/119 (79%), Gaps = 0/119 (0%)
Query 1 MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
+MDELRR GLDKM EVY WDMPD+PG++F T+DHLFG IWTRP LSMRDRR+ ++ ++
Sbjct 10 VMDELRRQGLDKMKEVYGWDMPDIPGDYFKYTIDHLFGTIWTRPELSMRDRRLLLLGAVS 69
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQA 119
A G ++LE+Q +A L N ELT ELRE+A+FITHYVG+PLG R+N +E AK+ +A
Sbjct 70 ALGLDEILEIQTSAALKNGELTEAELREVAIFITHYVGWPLGQRVNKHVEMAVAKQNEA 128
>gi|254818452|ref|ZP_05223453.1| hypothetical protein MintA_00927 [Mycobacterium intracellulare
ATCC 13950]
Length=142
Score = 161 bits (408), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/142 (60%), Positives = 105/142 (74%), Gaps = 1/142 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDELR GL KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDELRSKGLAKMNEVYGWEMPNVEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N EL+ EL+E+AVF+THY+GFPLGS LN A++ V AKRK+AA
Sbjct 61 AIGNRDLAEIQINAALLNGELSETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESGK 142
G D KANV L SG+
Sbjct 121 AKGGGEDKKANVDAALKMHSGE 142
>gi|296166483|ref|ZP_06848914.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295898095|gb|EFG77670.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=144
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/143 (60%), Positives = 108/143 (76%), Gaps = 1/143 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGE-FFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
MDE+RR GL+KMNEVY W+MP++ G+ +F LTVDHLFG IWTRPGLSMRD+R+ + +T
Sbjct 1 MDEIRRRGLEKMNEVYGWEMPNIEGDAYFDLTVDHLFGSIWTRPGLSMRDKRIMTLTAVT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
A G DL E+Q+NA L N ELT EL+E+AVF+THY+GFPLGS LN A++ V AKRK+AA
Sbjct 61 AVGNRDLAEIQINAALLNGELTETELKEMAVFLTHYLGFPLGSALNGAVDAVVAKRKKAA 120
Query 121 ENGSLPDTKANVAEVLAKESGKS 143
G+ D KANV + GK+
Sbjct 121 AKGAGEDKKANVDAAVNMHRGKA 143
>gi|226306872|ref|YP_002766832.1| 4-carboxymuconolactone decarboxylase [Rhodococcus erythropolis
PR4]
gi|226185989|dbj|BAH34093.1| putative 4-carboxymuconolactone decarboxylase [Rhodococcus erythropolis
PR4]
Length=147
Score = 153 bits (386), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 67/120 (56%), Positives = 93/120 (78%), Gaps = 1/120 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMP-DMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
+ E R G+ KMNEVY W++P D+PG+FFA+T DHLF IWTRPGLS+RDRR+ +I +T
Sbjct 12 ISEARARGVAKMNEVYGWELPADVPGDFFAVTADHLFADIWTRPGLSVRDRRLLLIGAIT 71
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
AQGQ+D+ ++Q+NA LHN+ELT + E A+F+ HYVG+PL + LN+A+ V A R++AA
Sbjct 72 AQGQNDVAKIQINAALHNEELTEQQFEEAAIFLCHYVGWPLATGLNNALIAVKADRRKAA 131
>gi|229492741|ref|ZP_04386542.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
erythropolis SK121]
gi|229320400|gb|EEN86220.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
erythropolis SK121]
Length=153
Score = 146 bits (368), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 64/114 (57%), Positives = 88/114 (78%), Gaps = 1/114 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMP-DMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
+ E R G+ KMNEVY W++P D+PG+FFA+T DHLF IWTRPGLS+RDRR+ +I +T
Sbjct 18 ISEARARGVAKMNEVYGWELPADVPGDFFAVTADHLFADIWTRPGLSVRDRRLLLIGAIT 77
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAA 114
AQGQ+D+ ++Q+NA LHN+ELT + E A+F+ HYVG+PL + LN+A+ V A
Sbjct 78 AQGQNDVAKIQINAALHNEELTEQQFEEAAIFLCHYVGWPLATGLNNALIAVKA 131
>gi|111021632|ref|YP_704604.1| 4-carboxymuconolactone decarboxylase [Rhodococcus jostii RHA1]
gi|110821162|gb|ABG96446.1| 4-carboxymuconolactone decarboxylase [Rhodococcus jostii RHA1]
Length=130
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/112 (56%), Positives = 83/112 (75%), Gaps = 0/112 (0%)
Query 1 MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
M D+ R GL M +VY ++M D PG FA+T DHLF IW+RPGLS+RDRR+ ++ LT
Sbjct 1 MTDDTRTRGLAMMEKVYGFEMQDGPGAHFAVTADHLFADIWSRPGLSIRDRRLLLLGALT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERV 112
AQG D+ E+QV A LHN+EL D+LRE+A+F+ HYVG+PLG++L+S I V
Sbjct 61 AQGLVDVAEIQVGAALHNEELDEDQLREIALFLCHYVGWPLGTKLDSMIGGV 112
>gi|226364168|ref|YP_002781950.1| hypothetical protein ROP_47580 [Rhodococcus opacus B4]
gi|226242657|dbj|BAH53005.1| hypothetical protein [Rhodococcus opacus B4]
Length=130
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 61/112 (55%), Positives = 83/112 (75%), Gaps = 0/112 (0%)
Query 1 MMDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
M D+ R GL M +VY ++M D PG FA+T DHLF IW+RPGLS+RDRR+ ++ LT
Sbjct 1 MTDDTRARGLAMMEKVYGFEMQDGPGAHFAVTADHLFADIWSRPGLSIRDRRLLLLGALT 60
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERV 112
AQG D+ E+QV A LHN+EL D+LRE+A+F+ HYVG+PLG++L++ I V
Sbjct 61 AQGLVDVAEIQVGAALHNEELDDDQLREIALFLCHYVGWPLGTKLDAMIGGV 112
>gi|326331683|ref|ZP_08197971.1| 4-carboxymuconolactone decarboxylase domain protein [Nocardioidaceae
bacterium Broad-1]
gi|325950482|gb|EGD42534.1| 4-carboxymuconolactone decarboxylase domain protein [Nocardioidaceae
bacterium Broad-1]
Length=137
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/120 (49%), Positives = 82/120 (69%), Gaps = 0/120 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
+ E R GL KM EVY +DM D G+FF T DHLFG IW RPGL+ RDRR+ +I +L
Sbjct 16 LPEARARGLRKMEEVYGFDMADGEGDFFRYTADHLFGDIWQRPGLTTRDRRLLLIGLLAG 75
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAAE 121
+G +D+L +Q+ A N EL+ DELRE+ VF++HY G+P G+R+N+ +E K ++ A+
Sbjct 76 RGAADVLGIQIPAAYANGELSEDELREIVVFLSHYAGWPDGARMNTVVEETIGKARRKAQ 135
>gi|326384245|ref|ZP_08205927.1| carboxymuconolactone decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
gi|326197110|gb|EGD54302.1| carboxymuconolactone decarboxylase [Gordonia neofelifaecis NRRL
B-59395]
Length=129
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/119 (48%), Positives = 80/119 (68%), Gaps = 0/119 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
M + RR GL KM+EVY W+M D PG+FFA T D +FG +W+R GL+ RDRR+ ++ L A
Sbjct 10 MTDQRRKGLAKMSEVYGWEMSDGPGDFFAHTADQVFGEVWSRDGLTHRDRRLILLGALAA 69
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQAA 120
GQ D+ E+Q A L N ELT +EL E+ +F+ +YVG+PLG+++ V K K++
Sbjct 70 NGQVDVAEIQAGAALGNGELTPEELNEIGLFLCYYVGWPLGTKMTMMFGEVIKKHKKSG 128
>gi|319950419|ref|ZP_08024335.1| hypothetical protein ES5_12600 [Dietzia cinnamea P4]
gi|319435935|gb|EFV91139.1| hypothetical protein ES5_12600 [Dietzia cinnamea P4]
Length=132
Score = 124 bits (310), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 77/108 (72%), Gaps = 0/108 (0%)
Query 2 MDELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
M R GL M EVY ++M D PG++FA T DHLFGRIW+RPGL+ RDRR+ ++ LTA
Sbjct 9 MSPERAHGLAMMTEVYGFEMSDGPGDYFAETADHLFGRIWSRPGLTHRDRRLLLLGALTA 68
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAI 109
QG +D+ ++QV A L N ELT +EL E+ +F+ +Y G+P G++L + +
Sbjct 69 QGNTDVADIQVGAALGNGELTPEELEEIVLFLCYYAGWPNGTKLGNVV 116
>gi|312138807|ref|YP_004006143.1| 4-carboxymuconolactone decarboxylase [Rhodococcus equi 103S]
gi|325676493|ref|ZP_08156171.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
equi ATCC 33707]
gi|311888146|emb|CBH47458.1| putative 4-carboxymuconolactone decarboxylase [Rhodococcus equi
103S]
gi|325552671|gb|EGD22355.1| 4-carboxymuconolactone decarboxylase domain protein [Rhodococcus
equi ATCC 33707]
Length=138
Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 59/107 (56%), Positives = 85/107 (80%), Gaps = 1/107 (0%)
Query 4 ELRRTGLDKMNEVYAWDMP-DMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQ 62
E R+ G+ MN+VY W+MP D+PG+FFA+T DHLF IWTRPGLS+RDRR+ ++ + AQ
Sbjct 12 ERRKRGVAMMNQVYGWEMPSDVPGDFFAVTADHLFADIWTRPGLSLRDRRLLLLGAIAAQ 71
Query 63 GQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAI 109
GQ+D+ ++Q+NA L N+ELT ++ E A+F+ HYVG+PLG+ LN+A+
Sbjct 72 GQTDVAKIQINAALGNEELTEQQIEEAAIFLCHYVGWPLGTGLNNAL 118
>gi|262203713|ref|YP_003274921.1| carboxymuconolactone decarboxylase [Gordonia bronchialis DSM
43247]
gi|262087060|gb|ACY23028.1| Carboxymuconolactone decarboxylase [Gordonia bronchialis DSM
43247]
Length=130
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/116 (44%), Positives = 76/116 (66%), Gaps = 0/116 (0%)
Query 4 ELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQG 63
E R+ G++ M++VY W+M D PG FA T D LF +W+R GLS+RDRR+ ++ L A G
Sbjct 13 EQRKRGVEMMSKVYGWEMSDGPGLHFAHTADQLFAEVWSRAGLSIRDRRLLLLGALAAGG 72
Query 64 QSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQA 119
D+ E+Q A L N ELT ++L E+A+F+ +YVG+P G+++N V K + A
Sbjct 73 LVDVAEIQARAALGNGELTPEQLEEIALFLCYYVGWPTGTKMNMVFGEVIKKHRNA 128
>gi|343927854|ref|ZP_08767322.1| hypothetical protein GOALK_097_02840 [Gordonia alkanivorans NBRC
16433]
gi|343762495|dbj|GAA14248.1| hypothetical protein GOALK_097_02840 [Gordonia alkanivorans NBRC
16433]
Length=129
Score = 97.8 bits (242), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/117 (45%), Positives = 79/117 (68%), Gaps = 1/117 (0%)
Query 3 DELRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQ 62
DE+R+ GL +M+EVY W+M D PG++FA T D +FG +W R GLS RDRR+ ++ L A
Sbjct 12 DEVRKRGLKRMSEVYGWEMSDGPGDYFAHTADQVFGNVWAREGLSDRDRRLLLLGALAAS 71
Query 63 GQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAK-RKQ 118
D+ E+Q A L N ELT ++L E+++F+ +Y+G+P G++++ V K RKQ
Sbjct 72 NNIDVAEIQAGAALGNGELTPEQLEEISLFLCYYIGWPQGTKMHFMFGEVIKKHRKQ 128
>gi|271967748|ref|YP_003341944.1| carboxymuconolactone decarboxylase [Streptosporangium roseum
DSM 43021]
gi|270510923|gb|ACZ89201.1| putative carboxymuconolactone decarboxylase [Streptosporangium
roseum DSM 43021]
Length=127
Score = 94.0 bits (232), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/108 (50%), Positives = 77/108 (72%), Gaps = 1/108 (0%)
Query 6 RRTGLDKMNEVYAWD-MPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQ 64
R GL+ M V+ WD + D PG+FF +TV+HLF +W+R GLS+RDRR+ ++ +L QG
Sbjct 13 RARGLEIMKRVHGWDHIGDGPGDFFGMTVEHLFAEVWSRDGLSLRDRRLLLLGLLVGQGM 72
Query 65 SDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERV 112
D L +Q++A L ELT DELRE+ VF+THY G+P G++LN+ +E +
Sbjct 73 DDELGLQLDAALRTGELTPDELREIVVFLTHYAGWPRGAKLNTQVEEL 120
>gi|54024549|ref|YP_118791.1| hypothetical protein nfa25800 [Nocardia farcinica IFM 10152]
gi|54016057|dbj|BAD57427.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=127
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/104 (49%), Positives = 66/104 (64%), Gaps = 8/104 (7%)
Query 5 LRRTGLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQ 64
+R GL KM EVY +D D E FALT DHLF IW+RPGLS+RDRR+ ++ LTA G
Sbjct 17 VRERGLAKMAEVYGFDFADGTDELFALTADHLFAGIWSRPGLSVRDRRLLLLGALTAGGL 76
Query 65 SDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSA 108
D+ +QV+A LHN E T ++L +A F LG++L+ A
Sbjct 77 PDVASIQVSAALHNGECTGEQLHAIARF--------LGTQLDPA 112
>gi|254481357|ref|ZP_05094602.1| carboxymuconolactone decarboxylase family protein [marine gamma
proteobacterium HTCC2148]
gi|214038520|gb|EEB79182.1| carboxymuconolactone decarboxylase family protein [marine gamma
proteobacterium HTCC2148]
Length=129
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/98 (40%), Positives = 64/98 (66%), Gaps = 4/98 (4%)
Query 6 RRTGLDKMNEVYAWDMPDMPGEFFALT---VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQ 62
R+ G +K+ +VYA D+ +P E +A T ++ LF +WTR LSMRD+R+ ++ ++ AQ
Sbjct 7 RQQGEEKIKQVYAGDVV-VPPEGYAFTDIMLETLFAEVWTRDTLSMRDKRILLLGMIAAQ 65
Query 63 GQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFP 100
G+ ++Q A + N ELT +++REL +FI Y G+P
Sbjct 66 GEGMTFKIQTKAGIKNGELTAEDVRELHLFIAQYCGYP 103
>gi|254818538|ref|ZP_05223539.1| hypothetical protein MintA_01371 [Mycobacterium intracellulare
ATCC 13950]
Length=269
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/115 (40%), Positives = 62/115 (54%), Gaps = 4/115 (3%)
Query 9 GLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLL 68
G EV D P G F A +D +FG +W+RPGLS RDRR +A + A L
Sbjct 11 GARTFAEVMTVDPPGDRGPFTAGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPL 70
Query 69 EVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIE----RVAAKRKQA 119
E V A L++ +LTI E+RE + Y G+P SR N A++ R+A +R +A
Sbjct 71 EQHVYAALNSGDLTITEMRETVLHFAVYAGWPKASRFNIAVDQEWARIAEERGEA 125
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/89 (31%), Positives = 47/89 (53%), Gaps = 4/89 (4%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ +E+ ELA+
Sbjct 174 LNFVFGEMWLRPGLGMKERRLITVACVAFQDAEIPIISHVYAALKSGDVSFEEMDELALQ 233
Query 93 ITHYVGFPLGSRLNSAI----ERVAAKRK 117
Y G LN I +RV A+ +
Sbjct 234 FAAYYGCAKADYLNQVIAEQKQRVTAESR 262
>gi|336458841|gb|EGO37798.1| uncharacterized protein, gamma-carboxymuconolactone decarboxylase
subunit like protein [Mycobacterium avium subsp. paratuberculosis
S397]
Length=273
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/118 (36%), Positives = 64/118 (55%), Gaps = 4/118 (3%)
Query 9 GLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLL 68
G+ EV +D PD + +D +FG +W+RPGLS RDRR +A + A L
Sbjct 15 GVRTFAEVMTFDPPDDASPCASGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPL 74
Query 69 EVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIE----RVAAKRKQAAEN 122
E V A L++ +L+I E+RE + Y G+P SR N ++ R+AA+R + A +
Sbjct 75 EQHVYAALNSGDLSITEMREAVLHFAVYAGWPKASRFNIVVDQQWARIAAERGEPAPD 132
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 48/92 (53%), Gaps = 2/92 (2%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ E+ E+A+
Sbjct 178 LNFVFGEMWLRPGLGMKERRLITVACVAFQDAEIPIMSHVYAALKSGDVSFREMDEVALQ 237
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQAAENGS 124
Y G LN AI K++ AEN S
Sbjct 238 FAAYYGCAKADHLNQAI--AEQKQRVIAENHS 267
>gi|342858470|ref|ZP_08715125.1| hypothetical protein MCOL_06331 [Mycobacterium colombiense CECT
3035]
gi|342134174|gb|EGT87354.1| hypothetical protein MCOL_06331 [Mycobacterium colombiense CECT
3035]
Length=268
Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/111 (38%), Positives = 59/111 (54%), Gaps = 0/111 (0%)
Query 9 GLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLL 68
G+ EV D PD + +D +FG +W+RPGLS RDRR +A + A L
Sbjct 10 GVRTFAEVMTIDPPDGDSPYAGGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPL 69
Query 69 EVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQA 119
E V A L++ +LTI E+RE + Y G+P SR N A++ AK +A
Sbjct 70 EQHVYAALNSGDLTITEMRETVLHFAVYAGWPKASRFNIAVDMQWAKIAEA 120
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/92 (31%), Positives = 49/92 (54%), Gaps = 4/92 (4%)
Query 30 ALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELREL 89
A ++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ +E+ EL
Sbjct 170 AGILNFVFGEMWLRPGLGMKERRLITVACVAFQDADIPIMSHVYAALKSGDVSFEEMDEL 229
Query 90 AVFITHYVGFPLGSRLNSAI----ERVAAKRK 117
A+ Y G LN I +RV A+++
Sbjct 230 ALHFAAYYGCAKAEYLNQVIAEQKQRVTAEKQ 261
>gi|118463997|ref|YP_882730.1| hypothetical protein MAV_3552 [Mycobacterium avium 104]
gi|118165284|gb|ABK66181.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
avium 104]
Length=271
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/114 (36%), Positives = 62/114 (55%), Gaps = 4/114 (3%)
Query 9 GLDKMNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLL 68
G+ EV +D PD + +D +FG +W+RPGLS RDRR +A + A L
Sbjct 13 GVRTFAEVMTFDPPDDASPCASGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPL 72
Query 69 EVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIE----RVAAKRKQ 118
E V A L++ +L+I E+RE + Y G+P SR N ++ R+AA+R +
Sbjct 73 EQHVYAALNSGDLSITEMREAVLHFAVYAGWPKASRFNIVVDQQWARIAAERGE 126
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (31%), Positives = 48/92 (53%), Gaps = 2/92 (2%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ E+ E+A+
Sbjct 176 LNFVFGEMWLRPGLGMKERRLITVACVAFQDAEIPIMSHVYAALKSGDVSFREMDEVALQ 235
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQAAENGS 124
Y G LN A+ K++ AEN S
Sbjct 236 FAAYYGCAKADHLNQAL--AEQKQRVIAENHS 265
>gi|41408879|ref|NP_961715.1| hypothetical protein MAP2781 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41397238|gb|AAS05098.1| hypothetical protein MAP_2781 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=258
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/112 (37%), Positives = 62/112 (56%), Gaps = 4/112 (3%)
Query 15 EVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNA 74
EV +D PD + +D +FG +W+RPGLS RDRR +A + A LE V A
Sbjct 6 EVMTFDPPDDASPCASGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPLEQHVYA 65
Query 75 VLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIE----RVAAKRKQAAEN 122
L++ +L+I E+RE + Y G+P SR N ++ R+AA+R + A +
Sbjct 66 ALNSGDLSITEMREAVLHFAVYAGWPKASRFNIVVDQQWARIAAERGEPAPD 117
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 48/92 (53%), Gaps = 2/92 (2%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ E+ E+A+
Sbjct 163 LNFVFGEMWLRPGLGMKERRLITVACVAFQDAEIPIMSHVYAALKSGDVSFREMDEVALQ 222
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQAAENGS 124
Y G LN AI K++ AEN S
Sbjct 223 FAAYYGCAKADHLNQAIAE--QKQRVIAENHS 252
>gi|318059963|ref|ZP_07978686.1| hypothetical protein SSA3_18611 [Streptomyces sp. SA3_actG]
gi|318077317|ref|ZP_07984649.1| hypothetical protein SSA3_11490 [Streptomyces sp. SA3_actF]
Length=468
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/119 (37%), Positives = 65/119 (55%), Gaps = 7/119 (5%)
Query 6 RRTGLDKMNEVYAWD----MPDMPGEFFA-LTVDHLFGRIWTRPGLSMRDRRMAVIAVLT 60
R GL M+ VY MP PG+ F T+ +LF ++W RPGL++RDRR+ + V
Sbjct 324 RAFGLAVMDRVYGRGFGERMPP-PGDLFQDETLSYLFAQVWARPGLAVRDRRLLTLGVAA 382
Query 61 AQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIER-VAAKRKQ 118
G+ DL+E+ V L N ELT +L E A+ + Y G+ + + I R +AA R +
Sbjct 383 TVGRPDLVEIIVGGALENGELTPAQLEEAALHLATYTGWCKATATHEGIGRAIAAHRAR 441
>gi|254775994|ref|ZP_05217510.1| hypothetical protein MaviaA2_15180 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=258
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/108 (38%), Positives = 60/108 (56%), Gaps = 4/108 (3%)
Query 15 EVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNA 74
EV +D PD + +D +FG +W+RPGLS RDRR +A + A LE V A
Sbjct 6 EVMTFDPPDDASPCASGLIDFVFGEVWSRPGLSRRDRRFVTLACVAAADAQAPLEQHVYA 65
Query 75 VLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIE----RVAAKRKQ 118
L++ +L+I E+RE + Y G+P SR N ++ R+AA+R +
Sbjct 66 ALNSGDLSITEMREAVLHFAVYAGWPKASRFNIVVDQQWARIAAERGE 113
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/92 (32%), Positives = 48/92 (53%), Gaps = 2/92 (2%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ E+ E+A+
Sbjct 163 LNFVFGEMWLRPGLGMKERRLITVACVAFQDAEIPIMSHVYAALKSGDVSFREMDEVALQ 222
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQAAENGS 124
Y G LN AI K++ AEN S
Sbjct 223 FAAYYGCAKADHLNQAIAE--QKQRVIAENHS 252
>gi|302519308|ref|ZP_07271650.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302428203|gb|EFL00019.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=440
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/118 (36%), Positives = 64/118 (55%), Gaps = 5/118 (4%)
Query 6 RRTGLDKMNEVYAWDMPDM---PGEFFA-LTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
R GL M+ VY + PG+ F T+ +LF ++W RPGL++RDRR+ + V
Sbjct 296 RAFGLAVMDRVYGRGFGERMSPPGDLFQDETLSYLFAQVWARPGLAVRDRRLLTLGVAAT 355
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIER-VAAKRKQ 118
G+ DL+E+ V L N ELT +L E A+ + Y G+ + + I R +AA R +
Sbjct 356 VGRPDLVEIIVGGALENGELTPAQLEEAALHLATYTGWCKATATHEGIGRAIAAHRAR 413
>gi|111223414|ref|YP_714208.1| hypothetical protein FRAAL4011 [Frankia alni ACN14a]
gi|111150946|emb|CAJ62653.1| hypothetical protein FRAAL4011 [Frankia alni ACN14a]
Length=493
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/139 (32%), Positives = 70/139 (51%), Gaps = 20/139 (14%)
Query 3 DELRRTGLDKMNEVYAWDMPDMPG----------EFFALTVDHLFGRIWTRPGLSMRDRR 52
D R GL+ M++VY PG F TV++LF ++W RPGLS+RDRR
Sbjct 345 DGPHRYGLEMMDQVYG------PGFSAGVQGGHDPFTDETVNYLFAQVWGRPGLSVRDRR 398
Query 53 MAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSR----LNSA 108
+ + V G+ +L+++ L NDELT D+LRE + + Y G+ + + +A
Sbjct 399 LLTLGVAATVGRPELVQIIATGGLVNDELTPDQLREAVLHLAVYTGWCKATATHAGVTAA 458
Query 109 IERVAAKRKQAAENGSLPD 127
+E A + +A+ D
Sbjct 459 VEAHTAGKGHSADGAHTAD 477
>gi|296169452|ref|ZP_06851072.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895718|gb|EFG75413.1| 4-carboxymuconolactone decarboxylase domain protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=268
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/119 (36%), Positives = 59/119 (50%), Gaps = 5/119 (4%)
Query 3 DELRRTGLDKMNEVYAWDMP-DMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTA 61
++ R GL EV D P D +D +F +WTRPGLS RDRR +A +
Sbjct 6 NQRRERGLRAFAEVMTVDAPADSSPAIADGLIDFVFAEVWTRPGLSRRDRRFVTLACVAG 65
Query 62 QGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAI----ERVAAKR 116
+ LE V A L++ +LTI E+RE + Y G+P S+ N + ER+A R
Sbjct 66 ADATPALEQHVYAALNSGDLTITEMREAVLHFAVYAGWPKASQFNMVVDAQWERIARAR 124
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/86 (35%), Positives = 50/86 (59%), Gaps = 4/86 (4%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M++RR+ +A + Q + V A L + +++ +E+ ELA+
Sbjct 176 LNFVFGEMWLRPGLGMKERRLITLACVGFQDAQYPIMSHVYAALKSGDVSFEEMDELALH 235
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQ 118
Y G+P GS LN I A++KQ
Sbjct 236 FAAYYGWPKGSYLNQVI----AEQKQ 257
>gi|312195890|ref|YP_004015951.1| carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
gi|311227226|gb|ADP80081.1| Carboxymuconolactone decarboxylase [Frankia sp. EuI1c]
Length=255
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/94 (38%), Positives = 54/94 (58%), Gaps = 2/94 (2%)
Query 34 DHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFI 93
D +FG +W+RPGLS DRR+ +A + A G +E QV+A L++ +L + + EL +
Sbjct 31 DFVFGDVWSRPGLSRHDRRLVTLACVAAAGSPGPMEEQVHAALNSGDLDLATMLELVLHF 90
Query 94 THYVGFPLGSRLNSAIERVAAKRKQAAENGSLPD 127
Y G+P GS L + +A + A ENG P+
Sbjct 91 AVYCGWPKGSELERVVGEQSA--RIARENGREPE 122
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/71 (37%), Positives = 40/71 (57%), Gaps = 0/71 (0%)
Query 36 LFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITH 95
+FG +W RPGL+ RDRR+ I+ + G + + V L + +LT +EL E+ +
Sbjct 173 VFGHLWLRPGLTRRDRRILSISCVGTTGAPTPIRMHVTTALRSGDLTREELDEIVLQFAA 232
Query 96 YVGFPLGSRLN 106
Y GF G+ LN
Sbjct 233 YAGFATGAVLN 243
>gi|158313278|ref|YP_001505786.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158108683|gb|ABW10880.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=308
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (33%), Positives = 59/124 (48%), Gaps = 4/124 (3%)
Query 7 RTGLDK--MNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQ 64
RTG+ + EV A + P F A D +FG +W RPGLS RDRR + + A
Sbjct 32 RTGVAERVFREVMATEAPPALTPFEAAARDFVFGEVWRRPGLSRRDRRWVTLTCVAAADA 91
Query 65 SDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAK--RKQAAEN 122
++ V A L + ++ I E+ E + Y G+P S L + R A+ R++ AE
Sbjct 92 PGPIDAHVYAALRSGDIEIAEMLEFVLHFAVYCGWPKASHLEGVVGRQWARVQRERGAEP 151
Query 123 GSLP 126
P
Sbjct 152 TGWP 155
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (33%), Positives = 37/71 (53%), Gaps = 0/71 (0%)
Query 36 LFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITH 95
+FG +W RPGL+ R+RR+ +A + L V+ L + +LT E+ E+ +
Sbjct 202 VFGNVWRRPGLTRRERRIITVACVGIDDSPMPLRTHVDVALRSGDLTSAEMDEIVLQFAV 261
Query 96 YVGFPLGSRLN 106
Y GF G L+
Sbjct 262 YYGFAKGEALS 272
>gi|158316001|ref|YP_001508509.1| carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
gi|158111406|gb|ABW13603.1| Carboxymuconolactone decarboxylase [Frankia sp. EAN1pec]
Length=252
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/106 (32%), Positives = 53/106 (50%), Gaps = 0/106 (0%)
Query 13 MNEVYAWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQV 72
EV + PD+ F T D +FG +W RPGLS RDRR + + A + ++ V
Sbjct 10 FREVMTVEPPDVATPFEVATRDFVFGEVWRRPGLSRRDRRWVTLTCVAAADAPEPIDAHV 69
Query 73 NAVLHNDELTIDELRELAVFITHYVGFPLGSRLNSAIERVAAKRKQ 118
A L++ ++ ++ + E + Y G+P S L I R A+ +Q
Sbjct 70 YAALNSSDIELEAMLEFVLHFAVYCGWPKASHLEGVIVRQWARIQQ 115
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (33%), Positives = 44/78 (57%), Gaps = 0/78 (0%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL+ R+RR+ +A + L+ V + LH+ +LT E+ E+ +
Sbjct 169 LNFVFGHVWQRPGLTRRERRIITVACVAIDDSPMPLKTHVTSALHSGDLTKVEMDEIVLQ 228
Query 93 ITHYVGFPLGSRLNSAIE 110
+ Y GF G+ L +E
Sbjct 229 FSAYYGFAKGAALGDTVE 246
>gi|318062510|ref|ZP_07981231.1| hypothetical protein SSA3_31537 [Streptomyces sp. SA3_actG]
gi|318078120|ref|ZP_07985452.1| hypothetical protein SSA3_15700 [Streptomyces sp. SA3_actF]
Length=411
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (34%), Positives = 56/101 (56%), Gaps = 4/101 (3%)
Query 3 DELRRTGLDKMNEVY----AWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAV 58
++ R GL M++ Y + + D F TVD+LF ++W R GLS+RDRR+ + V
Sbjct 276 EDARAYGLHMMDQAYGPGFSAAVQDADDPFSTETVDYLFAQVWGRAGLSVRDRRLLTLGV 335
Query 59 LTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGF 99
+ +L++V N L N EL+ ++LRE + + Y G+
Sbjct 336 AATVARPELVQVIANGALVNGELSAEQLREAVLHLALYTGW 376
>gi|302517297|ref|ZP_07269639.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|302426192|gb|EFK98007.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=326
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/101 (34%), Positives = 56/101 (56%), Gaps = 4/101 (3%)
Query 3 DELRRTGLDKMNEVY----AWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAV 58
++ R GL M++ Y + + D F TVD+LF ++W R GLS+RDRR+ + V
Sbjct 191 EDARAYGLHMMDQAYGPGFSAAVQDADDPFSTETVDYLFAQVWGRAGLSVRDRRLLTLGV 250
Query 59 LTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGF 99
+ +L++V N L N EL+ ++LRE + + Y G+
Sbjct 251 AATVARPELVQVIANGALVNGELSAEQLREAVLHLALYTGW 291
>gi|295840675|ref|ZP_06827607.1| carboxymuconolactone decarboxylase [Streptomyces sp. SPB74]
gi|295825240|gb|EDY43169.2| carboxymuconolactone decarboxylase [Streptomyces sp. SPB74]
Length=412
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/101 (34%), Positives = 56/101 (56%), Gaps = 4/101 (3%)
Query 3 DELRRTGLDKMNEVY----AWDMPDMPGEFFALTVDHLFGRIWTRPGLSMRDRRMAVIAV 58
++ R GL M++ Y + + D F TVD+LF ++W R GLS+RDRR+ + V
Sbjct 276 EDARAYGLHMMDQAYGPGFSAAVQDADDPFSTETVDYLFAQVWGRAGLSVRDRRLLTLGV 335
Query 59 LTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGF 99
+ +L++V N L N EL+ ++LRE + + Y G+
Sbjct 336 AATVARPELVQVIANGALVNGELSAEQLREAVLHLALYTGW 376
>gi|333989054|ref|YP_004521668.1| hypothetical protein JDM601_0414 [Mycobacterium sp. JDM601]
gi|333485022|gb|AEF34414.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=265
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/77 (39%), Positives = 42/77 (55%), Gaps = 0/77 (0%)
Query 34 DHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFI 93
D +FG IW RPGLS RDR + L A + L + A LH+ ++TIDE+RE +
Sbjct 34 DFVFGEIWQRPGLSRRDRWFIALPCLAAADTEEPLREHIYAALHSGDVTIDEMREAVLHF 93
Query 94 THYVGFPLGSRLNSAIE 110
Y G+P S N ++
Sbjct 94 AVYSGWPKASLFNMIVD 110
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/93 (34%), Positives = 49/93 (53%), Gaps = 1/93 (1%)
Query 33 VDHLFGRIWTRPGLSMRDRRMAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVF 92
++ +FG +W RPGL M+ RR+ +A + Q + V A L + +++ DE+ E A+
Sbjct 172 LNFVFGEMWLRPGLGMKQRRLITVACVAFQDAPYPILSHVYAALKSRDVSFDEIDEAALQ 231
Query 93 ITHYVGFPLGSRLNSAIERVAAKRKQA-AENGS 124
Y G+P SRL IE + Q AE G+
Sbjct 232 FGAYYGWPKASRLIDVIEEQKQRVTQEWAEEGN 264
>gi|126437743|ref|YP_001073434.1| carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
gi|126237543|gb|ABO00944.1| Carboxymuconolactone decarboxylase [Mycobacterium sp. JLS]
Length=123
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (34%), Positives = 53/108 (50%), Gaps = 10/108 (9%)
Query 2 MDELRRTGLDKMNEVYAWDMPD---------MPGEFFALTVDHLFGRIWTRPGLSMRDRR 52
M + R GL + E+ +P+ E + VD +FGR+WTR GLS RDR
Sbjct 1 MTDTREQGLQVLRELLGGQIPEGTDFTEDGRFGAELIEIGVDSIFGRLWTREGLSRRDRS 60
Query 53 MAVIAVLTAQGQSDLLEVQVNAVLHNDELTIDELRELAVFITHYVGFP 100
+ + +L A +D + V L+N LT DE+ E+ + Y GFP
Sbjct 61 LVTMGILIALRATDEFKAHVKIGLNNG-LTEDEIAEVIYHASGYAGFP 107
Lambda K H
0.319 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128702269584
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40