BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0779c
Length=206
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840194|ref|NP_335231.1| hypothetical protein MT0803 [Mycoba... 398 3e-109
gi|15607919|ref|NP_215293.1| transmembrane protein [Mycobacteriu... 397 6e-109
gi|289446344|ref|ZP_06436088.1| conserved membrane protein [Myco... 394 4e-108
gi|340625798|ref|YP_004744250.1| hypothetical protein MCAN_07831... 390 8e-107
gi|339293800|gb|AEJ45911.1| transmembrane protein [Mycobacterium... 333 1e-89
gi|289756867|ref|ZP_06516245.1| transmembrane protein [Mycobacte... 326 1e-87
gi|254818441|ref|ZP_05223442.1| hypothetical protein MintA_00872... 286 1e-75
gi|108801524|ref|YP_641721.1| hypothetical protein Mmcs_4561 [My... 270 7e-71
gi|126437509|ref|YP_001073200.1| hypothetical protein Mjls_4944 ... 270 7e-71
gi|41406711|ref|NP_959547.1| hypothetical protein MAP0613c [Myco... 267 5e-70
gi|342862176|ref|ZP_08718818.1| hypothetical protein MCOL_24921 ... 266 2e-69
gi|240172327|ref|ZP_04750986.1| transmembrane protein [Mycobacte... 262 2e-68
gi|118469203|ref|YP_890069.1| hypothetical protein MSMEG_5842 [M... 259 2e-67
gi|15828194|ref|NP_302457.1| hypothetical protein ML2228 [Mycoba... 255 3e-66
gi|118616337|ref|YP_904669.1| transmembrane protein [Mycobacteri... 255 3e-66
gi|296166473|ref|ZP_06848905.1| transmembrane protein [Mycobacte... 253 1e-65
gi|118467118|ref|YP_879999.1| hypothetical protein MAV_0724 [Myc... 247 7e-64
gi|336458300|gb|EGO37279.1| hypothetical protein MAPs_14010 [Myc... 246 1e-63
gi|183984878|ref|YP_001853169.1| transmembrane protein [Mycobact... 241 6e-62
gi|333992223|ref|YP_004524837.1| transmembrane protein [Mycobact... 237 9e-61
gi|120406087|ref|YP_955916.1| putative transmembrane protein [My... 236 1e-60
gi|169627790|ref|YP_001701439.1| hypothetical protein MAB_0688c ... 228 5e-58
gi|145222207|ref|YP_001132885.1| hypothetical protein Mflv_1615 ... 223 2e-56
gi|289749290|ref|ZP_06508668.1| transmembrane protein [Mycobacte... 212 3e-53
gi|315504252|ref|YP_004083139.1| hypothetical protein ML5_3474 [... 134 8e-30
gi|302869273|ref|YP_003837910.1| hypothetical protein Micau_4825... 134 9e-30
gi|84496357|ref|ZP_00995211.1| possible conserved transmembrane ... 129 3e-28
gi|309811550|ref|ZP_07705330.1| conserved hypothetical protein [... 124 8e-27
gi|317124971|ref|YP_004099083.1| hypothetical protein Intca_1844... 124 1e-26
gi|296128352|ref|YP_003635602.1| hypothetical protein Cfla_0488 ... 122 2e-26
gi|238060537|ref|ZP_04605246.1| hypothetical protein MCAG_01503 ... 120 1e-25
gi|330469577|ref|YP_004407320.1| hypothetical protein VAB18032_2... 109 2e-22
gi|326332181|ref|ZP_08198461.1| hypothetical protein NBCG_03621 ... 105 3e-21
gi|254381009|ref|ZP_04996374.1| hypothetical protein SSAG_00676 ... 101 7e-20
gi|256825349|ref|YP_003149309.1| hypothetical protein Ksed_15240... 100 1e-19
gi|170783240|ref|YP_001711574.1| hypothetical protein CMS_2944 [... 96.3 3e-18
gi|88856269|ref|ZP_01130929.1| hypothetical protein A20C1_03196 ... 95.5 4e-18
gi|148274035|ref|YP_001223596.1| hypothetical protein CMM_2851 [... 95.1 5e-18
gi|284029642|ref|YP_003379573.1| hypothetical protein Kfla_1679 ... 95.1 5e-18
gi|297196711|ref|ZP_06914109.1| conserved hypothetical protein [... 87.0 1e-15
gi|297562483|ref|YP_003681457.1| hypothetical protein Ndas_3550 ... 80.9 1e-13
gi|152968244|ref|YP_001364028.1| transmembrane protein [Kineococ... 80.5 1e-13
gi|256379479|ref|YP_003103139.1| hypothetical protein Amir_5475 ... 77.0 2e-12
gi|300786218|ref|YP_003766509.1| hypothetical protein AMED_4334 ... 75.1 6e-12
gi|134099354|ref|YP_001105015.1| hypothetical protein SACE_2811 ... 65.9 3e-09
gi|284991424|ref|YP_003409978.1| hypothetical protein Gobs_2997 ... 63.2 2e-08
gi|72161357|ref|YP_289014.1| hypothetical protein Tfu_0953 [Ther... 61.6 6e-08
gi|302519061|ref|ZP_07271403.1| conserved hypothetical protein [... 50.1 2e-04
gi|333027112|ref|ZP_08455176.1| hypothetical protein STTU_4616 [... 49.7 3e-04
gi|152966612|ref|YP_001362396.1| hypothetical protein Krad_2660 ... 45.1 0.006
>gi|15840194|ref|NP_335231.1| hypothetical protein MT0803 [Mycobacterium tuberculosis CDC1551]
gi|148821986|ref|YP_001286739.1| transmembrane protein [Mycobacterium tuberculosis F11]
gi|253797725|ref|YP_003030726.1| hypothetical protein TBMG_00794 [Mycobacterium tuberculosis KZN
1435]
12 more sequence titles
Length=227
Score = 398 bits (1022), Expect = 3e-109, Method: Compositional matrix adjust.
Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI
Sbjct 22 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 81
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT
Sbjct 82 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 141
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW
Sbjct 142 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 201
Query 181 RREDPATMRALAALELRAAGIPLRGD 206
RREDPATMRALAALELRAAGIPLRGD
Sbjct 202 RREDPATMRALAALELRAAGIPLRGD 227
>gi|15607919|ref|NP_215293.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31791967|ref|NP_854460.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636703|ref|YP_976926.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
58 more sequence titles
Length=206
Score = 397 bits (1020), Expect = 6e-109, Method: Compositional matrix adjust.
Identities = 206/206 (100%), Positives = 206/206 (100%), Gaps = 0/206 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI
Sbjct 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT
Sbjct 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW
Sbjct 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
Query 181 RREDPATMRALAALELRAAGIPLRGD 206
RREDPATMRALAALELRAAGIPLRGD
Sbjct 181 RREDPATMRALAALELRAAGIPLRGD 206
>gi|289446344|ref|ZP_06436088.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289419302|gb|EFD16503.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
Length=206
Score = 394 bits (1013), Expect = 4e-108, Method: Compositional matrix adjust.
Identities = 205/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI
Sbjct 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT
Sbjct 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRFCRRKWTV TLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW
Sbjct 121 PILAVAMPWLFLRLRFCRRKWTVPTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
Query 181 RREDPATMRALAALELRAAGIPLRGD 206
RREDPATMRALAALELRAAGIPLRGD
Sbjct 181 RREDPATMRALAALELRAAGIPLRGD 206
>gi|340625798|ref|YP_004744250.1| hypothetical protein MCAN_07831 [Mycobacterium canettii CIPT
140010059]
gi|340003988|emb|CCC43123.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=206
Score = 390 bits (1001), Expect = 8e-107, Method: Compositional matrix adjust.
Identities = 202/206 (99%), Positives = 205/206 (99%), Gaps = 0/206 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIE+GSHGI
Sbjct 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEVGSHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT
Sbjct 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRF RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW
Sbjct 121 PILAVAMPWLFLRLRFFRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
Query 181 RREDPATMRALAALELRAAGIPLRGD 206
RREDPAT+RALAALELRAAGIPLRG+
Sbjct 181 RREDPATIRALAALELRAAGIPLRGN 206
>gi|339293800|gb|AEJ45911.1| transmembrane protein [Mycobacterium tuberculosis CCDC5079]
Length=214
Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 172/173 (99%), Positives = 172/173 (99%), Gaps = 0/173 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI
Sbjct 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT
Sbjct 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVS 173
PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAV
Sbjct 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVQ 173
>gi|289756867|ref|ZP_06516245.1| transmembrane protein [Mycobacterium tuberculosis T85]
gi|289712431|gb|EFD76443.1| transmembrane protein [Mycobacterium tuberculosis T85]
Length=179
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 170/170 (100%), Positives = 170/170 (100%), Gaps = 0/170 (0%)
Query 37 LAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIA 96
LAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIA
Sbjct 10 LAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIA 69
Query 97 GAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLL 156
GAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLL
Sbjct 70 GAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLL 129
Query 157 ALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELRAAGIPLRGD 206
ALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELRAAGIPLRGD
Sbjct 130 ALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELRAAGIPLRGD 179
>gi|254818441|ref|ZP_05223442.1| hypothetical protein MintA_00872 [Mycobacterium intracellulare
ATCC 13950]
Length=206
Score = 286 bits (732), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 147/205 (72%), Positives = 166/205 (81%), Gaps = 0/205 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL AQL SD V VWT LW+LV LAV+DAI+ I +AGRQ+E G+ GI
Sbjct 1 MTPRFLPYSTRPGRLAAQLFSDFAVVVWTALWLLVALAVYDAIATIADAGRQVESGADGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IPVVGD +S P+ +ASQAALDIAGAGH+LDT A WLAV+LA+AV A
Sbjct 61 AGNLASAGHGAQHIPVVGDTVSKPLNSASQAALDIAGAGHDLDTAASWLAVLLAMAVVAL 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL +PWLFLR+RF RRK TVT LAATPAG QLLALRAL NRPP KL AVS DPVG W
Sbjct 121 PILVAVIPWLFLRVRFFRRKLTVTALAATPAGAQLLALRALTNRPPRKLIAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRG 205
RREDP T+ ALAALELR+AGI +RG
Sbjct 181 RREDPVTIGALAALELRSAGIAIRG 205
>gi|108801524|ref|YP_641721.1| hypothetical protein Mmcs_4561 [Mycobacterium sp. MCS]
gi|119870678|ref|YP_940630.1| hypothetical protein Mkms_4649 [Mycobacterium sp. KMS]
gi|108771943|gb|ABG10665.1| putative conserved transmembrane protein [Mycobacterium sp. MCS]
gi|119696767|gb|ABL93840.1| putative conserved transmembrane protein [Mycobacterium sp. KMS]
Length=206
Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/201 (67%), Positives = 163/201 (82%), Gaps = 0/201 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M SRF+PYATTPGRLL QLISDI +AVW +W+ VG+AVH A++ I + GRQ+E G++GI
Sbjct 1 MTSRFVPYATTPGRLLGQLISDIVIAVWVLIWLFVGMAVHSAVATIAQVGRQVETGANGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
A NL +AG + +P++G+AL P+ AA +AALDIA AGH+LDTTA WLA VLALAVA+
Sbjct 61 ADNLESAGDQTKDVPLLGNALRGPLNAAGEAALDIANAGHSLDTTASWLAWVLALAVASP 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPW+FLR+RF RRKWT TLAATPAG+QLLALRALANRP KL +V DPVGAW
Sbjct 121 PILAVAMPWVFLRVRFVRRKWTAITLAATPAGQQLLALRALANRPLAKLVSVDADPVGAW 180
Query 181 RREDPATMRALAALELRAAGI 201
R +D A + LAALELR+AG+
Sbjct 181 RNQDVAAISGLAALELRSAGV 201
>gi|126437509|ref|YP_001073200.1| hypothetical protein Mjls_4944 [Mycobacterium sp. JLS]
gi|126237309|gb|ABO00710.1| putative conserved transmembrane protein [Mycobacterium sp. JLS]
Length=206
Score = 270 bits (691), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 134/201 (67%), Positives = 163/201 (82%), Gaps = 0/201 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M SRF+PYATTPGRLL QLISDI +AVW +W+ VG+AVH A++ I + GRQ+E G++GI
Sbjct 1 MTSRFVPYATTPGRLLGQLISDIVIAVWVLIWLFVGMAVHSAVATIAQVGRQVETGANGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
A NL +AG + +P++G+AL P+ AA +AALDIA AGH+LDTTA WLA VLALAVA+
Sbjct 61 ADNLESAGDQTKDVPLLGNALRGPLNAAGEAALDIANAGHSLDTTASWLAWVLALAVASP 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPW+FLR+RF RRKWT TLAATPAG+QLLALRALANRP KL +V DPVGAW
Sbjct 121 PILAVAMPWVFLRVRFVRRKWTAITLAATPAGQQLLALRALANRPLAKLVSVDADPVGAW 180
Query 181 RREDPATMRALAALELRAAGI 201
R +D A + LAALELR+AG+
Sbjct 181 RNQDVAAISGLAALELRSAGV 201
>gi|41406711|ref|NP_959547.1| hypothetical protein MAP0613c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395061|gb|AAS02930.1| hypothetical protein MAP_0613c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=206
Score = 267 bits (683), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 147/205 (72%), Positives = 169/205 (83%), Gaps = 0/205 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL AQL SD+ V +WT LW+LVGLAV+DAI+ I +AGRQ+E G+HG+
Sbjct 1 MTPRFLPYSTRPGRLAAQLFSDLAVVIWTGLWILVGLAVYDAIATIADAGRQVESGAHGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IPVVGD +S P+ +ASQA LD+AGAGH+LD A WLAV+LA+AV A
Sbjct 61 AGNLASAGHGAQHIPVVGDTVSKPLNSASQAGLDMAGAGHDLDVAASWLAVLLAMAVVAL 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL PWLFLRLRF RRK TVT LAATPAG QLLALRALANRPP KL AVS DPVG W
Sbjct 121 PILVAVGPWLFLRLRFFRRKLTVTALAATPAGTQLLALRALANRPPRKLTAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRG 205
RREDPAT+RALAALEL++AGI +RG
Sbjct 181 RREDPATIRALAALELQSAGIAIRG 205
>gi|342862176|ref|ZP_08718818.1| hypothetical protein MCOL_24921 [Mycobacterium colombiense CECT
3035]
gi|342130254|gb|EGT83574.1| hypothetical protein MCOL_24921 [Mycobacterium colombiense CECT
3035]
Length=206
Score = 266 bits (679), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/205 (72%), Positives = 165/205 (81%), Gaps = 0/205 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL QL SD+ V VWT LW+LVGLAV+DAI+ I +AGRQ+E G+ GI
Sbjct 1 MTLRFLPYSTRPGRLAVQLFSDLAVVVWTVLWLLVGLAVYDAIATIADAGRQVESGAKGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNL +AG AQ IPVVGD +S P+ +AS AALDIAGAGH+LD+ A WLAV+LA+AV A
Sbjct 61 AGNLESAGHGAQHIPVVGDTVSKPLNSASHAALDIAGAGHDLDSAASWLAVLLAMAVVAV 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL MPW FLRLRF RRK TVTTLAATPAG QLLALRAL NRPP KL AVS DPVG W
Sbjct 121 PILIAVMPWFFLRLRFFRRKLTVTTLAATPAGAQLLALRALTNRPPRKLIAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRG 205
RREDPAT+ AL ALELR+AGI LRG
Sbjct 181 RREDPATIGALVALELRSAGIALRG 205
>gi|240172327|ref|ZP_04750986.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=206
Score = 262 bits (669), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 165/206 (81%), Positives = 178/206 (87%), Gaps = 0/206 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRF+PY+T P RL QL SDITVA WTT+W+LVGLAVH AIS I EAGRQIE GS GI
Sbjct 1 MRSRFVPYSTRPVRLAIQLFSDITVAAWTTVWVLVGLAVHSAISTIAEAGRQIENGSQGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNL +AG AQ IP+VGDA+S P TAAS+AALDIAGAGH+LDTTA WLAV+LALAVAAT
Sbjct 61 AGNLESAGHGAQHIPLVGDAVSKPFTAASEAALDIAGAGHSLDTTASWLAVLLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRF RRKWTVTTLA T AG+QLLALRALANR P KLAAVS DPVG W
Sbjct 121 PILAVAMPWLFLRLRFFRRKWTVTTLATTAAGQQLLALRALANRSPAKLAAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRGD 206
RREDPAT+R LAALELRAAG+ LRG
Sbjct 181 RREDPATIRGLAALELRAAGVRLRGH 206
>gi|118469203|ref|YP_890069.1| hypothetical protein MSMEG_5842 [Mycobacterium smegmatis str.
MC2 155]
gi|118170490|gb|ABK71386.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=207
Score = 259 bits (661), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/204 (68%), Positives = 167/204 (82%), Gaps = 0/204 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSR+LPYA+ PGRLLAQL SD+ V +WT +W+LVG+AVH A+S I E GRQ+E G++G+
Sbjct 1 MRSRYLPYASRPGRLLAQLFSDVAVILWTAIWVLVGMAVHSAVSTIAEVGRQVETGANGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
+ NL++AG +P++GD LS P+ AAS AALDIAGAGHNLD+TA WLA VLALAVAA
Sbjct 61 SENLSSAGDSTDNVPLIGDTLSKPLRAASDAALDIAGAGHNLDSTASWLAWVLALAVAAA 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL VAMPWL+LR+RF RRKWT TLA+T AG QLLALRALANRP KL AVS DPVGA+
Sbjct 121 PILFVAMPWLYLRVRFFRRKWTAITLASTAAGEQLLALRALANRPLSKLTAVSDDPVGAF 180
Query 181 RREDPATMRALAALELRAAGIPLR 204
+R+D A +R LAALELR+AG+ LR
Sbjct 181 QRQDQAAIRGLAALELRSAGMRLR 204
>gi|15828194|ref|NP_302457.1| hypothetical protein ML2228 [Mycobacterium leprae TN]
gi|221230671|ref|YP_002504087.1| hypothetical protein MLBr_02228 [Mycobacterium leprae Br4923]
gi|2076621|emb|CAB08410.1| unknown [Mycobacterium leprae]
gi|13093748|emb|CAC31184.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933778|emb|CAR72326.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=206
Score = 255 bits (652), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/204 (68%), Positives = 161/204 (79%), Gaps = 0/204 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M SRFLPYAT+PGRL QL+SDI V +WTT W+LVG+AV++ IS I + G Q+E G+HGI
Sbjct 1 MNSRFLPYATSPGRLTIQLLSDIAVVMWTTFWVLVGIAVYNTISTIADTGAQVESGAHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
A NLA+A Q IPV+G+A+S P+T S AALDIA AGH+L+TTA WLAV+LALAV A
Sbjct 61 ADNLASASHGMQLIPVLGNAVSKPLTLTSAAALDIADAGHSLNTTASWLAVLLALAVIAL 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL +PWL LR F R KWTVTTLAATPAG+QLLALRAL R P KLAAVS DPVG W
Sbjct 121 PILVAVVPWLVLRFWFFRHKWTVTTLAATPAGKQLLALRALTLRSPSKLAAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLR 204
RREDP T+R LAALEL+++GI LR
Sbjct 181 RREDPGTIRGLAALELQSSGITLR 204
>gi|118616337|ref|YP_904669.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118568447|gb|ABL03198.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=206
Score = 255 bits (651), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/204 (76%), Positives = 170/204 (84%), Gaps = 0/204 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M+SRFLPY+T P RL QL SDITV VWTTLW+ VG+AVH AIS I EAG QI+ GS G+
Sbjct 1 MKSRFLPYSTRPLRLAIQLFSDITVVVWTTLWVFVGIAVHRAISAIAEAGHQIDTGSQGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IP+VGDA+S PI AA+ AAL IA AGHNLD+TA WLA+VLA AVAAT
Sbjct 61 AGNLASAGHGAQHIPLVGDAVSKPIAAAADAALGIAEAGHNLDSTASWLAIVLAFAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRF RRKWTVT LAAT AG+QLLALRAL NRP KLAAVS DPVG W
Sbjct 121 PILAVAMPWLFLRLRFFRRKWTVTALAATAAGQQLLALRALTNRPAAKLAAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLR 204
RREDPA +R LAALELRAAG+ LR
Sbjct 181 RREDPAIIRGLAALELRAAGVRLR 204
>gi|296166473|ref|ZP_06848905.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898234|gb|EFG77808.1| transmembrane protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=206
Score = 253 bits (647), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 147/203 (73%), Positives = 170/203 (84%), Gaps = 0/203 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL+ QL+SD V +WT W+LVGLAV+DA+S I +AGRQ+E G+HGI
Sbjct 1 MTPRFLPYSTRPGRLMVQLLSDFAVTLWTAAWLLVGLAVYDAVSTIADAGRQVENGAHGI 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG Q IP+VGDALS P+ +ASQAALD+AGAGH+LD+TA WLAV+LA+A+AA
Sbjct 61 AGNLASAGHSTQHIPLVGDALSQPLNSASQAALDLAGAGHDLDSTASWLAVLLAMAIAAV 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL +PWL LRLRF RRK TVT LAATPAG QLLALRAL NRPPGKLAAVS DPVG W
Sbjct 121 PILVADVPWLLLRLRFFRRKLTVTALAATPAGEQLLALRALTNRPPGKLAAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPL 203
RREDP T+RALAALELRAAGI +
Sbjct 181 RREDPLTIRALAALELRAAGISI 203
>gi|118467118|ref|YP_879999.1| hypothetical protein MAV_0724 [Mycobacterium avium 104]
gi|254773662|ref|ZP_05215178.1| hypothetical protein MaviaA2_03167 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118168405|gb|ABK69302.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=206
Score = 247 bits (631), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/205 (73%), Positives = 170/205 (83%), Gaps = 0/205 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL AQL SD+ V +WT LW+LVGLAV+DAI+ I +AGRQ+E G+HG+
Sbjct 1 MTPRFLPYSTRPGRLAAQLFSDLAVVIWTGLWILVGLAVYDAIATIADAGRQVESGAHGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IPVVGD +S P+ +ASQAALD+AGAGH+LD A WLAV+LA+AV A
Sbjct 61 AGNLASAGHGAQHIPVVGDTVSKPLNSASQAALDMAGAGHDLDVAASWLAVLLAMAVVAL 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL PWLFLRLRF RRK TVT LAATPAG QLLALRALANRPP KL AVS DPVG W
Sbjct 121 PILVAVGPWLFLRLRFFRRKLTVTALAATPAGAQLLALRALANRPPRKLTAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRG 205
RREDPAT+RALAALEL++AGI +RG
Sbjct 181 RREDPATIRALAALELQSAGIAIRG 205
>gi|336458300|gb|EGO37279.1| hypothetical protein MAPs_14010 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=206
Score = 246 bits (628), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 147/205 (72%), Positives = 169/205 (83%), Gaps = 0/205 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M RFLPY+T PGRL AQL SD+ V +WT LW+LVGLAV+DAI+ I +AGRQ+E G+HG+
Sbjct 1 MTPRFLPYSTRPGRLAAQLFSDLAVVIWTGLWILVGLAVYDAIATIADAGRQVESGAHGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IPVVGD +S P+ +ASQA LD+AGAGH+LD A WLAV+LA+AV A
Sbjct 61 AGNLASAGHGAQHIPVVGDTVSKPLNSASQAGLDMAGAGHDLDVAASWLAVLLAMAVVAL 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PIL PWLFLRLRF RRK TVT LAATPAG QLLALRALANRPP KL AVS DPVG W
Sbjct 121 PILVAVGPWLFLRLRFFRRKLTVTALAATPAGAQLLALRALANRPPRKLTAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLRG 205
RREDPAT+RALAALEL++AGI +RG
Sbjct 181 RREDPATIRALAALELQSAGIAIRG 205
>gi|183984878|ref|YP_001853169.1| transmembrane protein [Mycobacterium marinum M]
gi|183178204|gb|ACC43314.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=206
Score = 241 bits (614), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 158/204 (78%), Positives = 172/204 (85%), Gaps = 0/204 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M+SRFLPY+T P RL QL SDITVAVWTTLW+ VG+AVH AIS I EAG QIE GS G+
Sbjct 1 MKSRFLPYSTRPLRLAIQLFSDITVAVWTTLWVFVGIAVHRAISAIAEAGHQIETGSQGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNLA+AG AQ IP+VGDA+S PI AA+ AAL IA AGHNLD+TA WLA+VLALAVAAT
Sbjct 61 AGNLASAGHGAQHIPLVGDAVSKPIAAAADAALGIAEAGHNLDSTASWLAIVLALAVAAT 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWLFLRLRF RRKWTVT LAAT AG+QLLALRAL NRP KLAAVS DPVG W
Sbjct 121 PILAVAMPWLFLRLRFFRRKWTVTALAATAAGQQLLALRALTNRPAAKLAAVSADPVGGW 180
Query 181 RREDPATMRALAALELRAAGIPLR 204
RREDPA +R LAALELRAAG+ LR
Sbjct 181 RREDPAIIRGLAALELRAAGVRLR 204
>gi|333992223|ref|YP_004524837.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333488191|gb|AEF37583.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=212
Score = 237 bits (604), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 138/201 (69%), Positives = 160/201 (80%), Gaps = 0/201 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M SR LPYAT+PGRLLAQL SD VAVWT LW+LV LAVH A++ I GRQ E G++G+
Sbjct 1 MTSRLLPYATSPGRLLAQLFSDAIVAVWTFLWVLVALAVHGAVATIAGVGRQFEQGANGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
A +LA+AG A RIP+VGDA+S P+TAA +AA+DIAGAGHNL+TTAGWLA +LA+AVAA
Sbjct 61 AESLASAGHSADRIPLVGDAVSKPLTAAGEAAVDIAGAGHNLNTTAGWLAYLLAIAVAAP 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILAVAMPWL LRLRF RK V LAATPAG QLLALRALANRP L AVS DPVGAW
Sbjct 121 PILAVAMPWLALRLRFFLRKRAVLALAATPAGLQLLALRALANRPHRALTAVSPDPVGAW 180
Query 181 RREDPATMRALAALELRAAGI 201
R +D + LAA+ELR+AG+
Sbjct 181 RHQDLPVIAELAAVELRSAGL 201
>gi|120406087|ref|YP_955916.1| putative transmembrane protein [Mycobacterium vanbaalenii PYR-1]
gi|119958905|gb|ABM15910.1| putative conserved transmembrane protein [Mycobacterium vanbaalenii
PYR-1]
Length=210
Score = 236 bits (602), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 130/201 (65%), Positives = 161/201 (81%), Gaps = 0/201 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
M+SR++PYATTPGRL+AQL SD+ V WT +W+ VG AVH A++ I + G Q+E G++G+
Sbjct 1 MKSRWVPYATTPGRLMAQLFSDVVVVGWTAIWIFVGTAVHSAVATIADFGYQVESGANGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNL +AGQ A+ +P++G A+ P+TAA AA +IAGAG L TAGWLA +LALAVAA
Sbjct 61 AGNLDSAGQSAEDVPLIGGAIGGPLTAAGDAAREIAGAGQTLGVTAGWLAWLLALAVAAP 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILA+ MPWLFLR+RF RRKWT TL++T AG QLLALRALANRP KLAA+STDPVGAW
Sbjct 121 PILALMMPWLFLRVRFFRRKWTAVTLSSTWAGEQLLALRALANRPLPKLAAISTDPVGAW 180
Query 181 RREDPATMRALAALELRAAGI 201
R +DP +R LAALELRA+GI
Sbjct 181 REQDPVAIRGLAALELRASGI 201
>gi|169627790|ref|YP_001701439.1| hypothetical protein MAB_0688c [Mycobacterium abscessus ATCC
19977]
gi|169239757|emb|CAM60785.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=207
Score = 228 bits (580), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/198 (68%), Positives = 156/198 (79%), Gaps = 0/198 (0%)
Query 4 RFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGN 63
RFLPY+T PGRLLAQL SDI VA WTT+W+ VGLAVH A++ I E GRQ++ G+ GI+ N
Sbjct 2 RFLPYSTRPGRLLAQLFSDIAVATWTTIWVFVGLAVHAAVATIAEVGRQVKNGADGISDN 61
Query 64 LAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPIL 123
L +AG A RIP+VGD + P+ AAS+AA D+AGAGHNLDTTA WLAVVLA+AVAA PIL
Sbjct 62 LNSAGDSAHRIPLVGDKVGAPLRAASEAAADLAGAGHNLDTTASWLAVVLAIAVAAPPIL 121
Query 124 AVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRRE 183
A A PW+FLR+RF RRK LAATPAG QLLALRALANRP KLA ++ DPV AWR +
Sbjct 122 AFAGPWIFLRIRFFRRKLIAVQLAATPAGEQLLALRALANRPLKKLAVITADPVSAWRAQ 181
Query 184 DPATMRALAALELRAAGI 201
D MR LAA+EL+AAGI
Sbjct 182 DATAMRGLAAVELKAAGI 199
>gi|145222207|ref|YP_001132885.1| hypothetical protein Mflv_1615 [Mycobacterium gilvum PYR-GCK]
gi|315442646|ref|YP_004075525.1| hypothetical protein Mspyr1_10010 [Mycobacterium sp. Spyr1]
gi|145214693|gb|ABP44097.1| putative conserved transmembrane protein [Mycobacterium gilvum
PYR-GCK]
gi|315260949|gb|ADT97690.1| hypothetical protein Mspyr1_10010 [Mycobacterium sp. Spyr1]
Length=210
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/201 (65%), Positives = 155/201 (78%), Gaps = 0/201 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSR++PYATTP RLL QL+SDI V WT W+ VG AVH A+S I E G Q+E G++G+
Sbjct 1 MRSRWIPYATTPVRLLWQLVSDIVVIAWTAAWVWVGTAVHSAVSTIAEFGYQLEGGANGV 60
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAAT 120
AGNL AG A +P++G AL+ P+ A AA +IAGAG +L TAGWLA +LALAVAA
Sbjct 61 AGNLDNAGNSADGVPLIGGALAGPLRGAGDAAREIAGAGQSLGVTAGWLAWLLALAVAAP 120
Query 121 PILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAW 180
PILA+ MPWLFLR+RF RRKWT TL++T AG QLLALRALANRP KLAA++ DPVGAW
Sbjct 121 PILALMMPWLFLRVRFFRRKWTAVTLSSTWAGEQLLALRALANRPLPKLAAINPDPVGAW 180
Query 181 RREDPATMRALAALELRAAGI 201
R +DP +R LAALELRA+GI
Sbjct 181 REQDPVAIRGLAALELRASGI 201
>gi|289749290|ref|ZP_06508668.1| transmembrane protein [Mycobacterium tuberculosis T92]
gi|289689877|gb|EFD57306.1| transmembrane protein [Mycobacterium tuberculosis T92]
Length=131
Score = 212 bits (539), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 108/109 (99%), Positives = 108/109 (99%), Gaps = 0/109 (0%)
Query 1 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 60
MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI
Sbjct 22 MRSRFLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGI 81
Query 61 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWL 109
AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAG L
Sbjct 82 AGNLAAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGCL 130
>gi|315504252|ref|YP_004083139.1| hypothetical protein ML5_3474 [Micromonospora sp. L5]
gi|315410871|gb|ADU08988.1| hypothetical protein ML5_3474 [Micromonospora sp. L5]
Length=213
Score = 134 bits (337), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 81/184 (45%), Positives = 107/184 (59%), Gaps = 0/184 (0%)
Query 18 QLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVV 77
Q ++D+ V VW + L +HD + + G+++E G+A NLA AG R+P+V
Sbjct 26 QFLTDLLVVVWVYAAIRFALWLHDVVEKLAVPGQKLEGAGGGLADNLADAGGKVGRVPIV 85
Query 78 GDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFC 137
GD L+ P T A+ AA +A AG + G LA+ L +AV P+ V WL LRLR+
Sbjct 86 GDELTAPFTRAADAARSVAEAGRDQQELVGQLALGLTVAVLVFPLGLVLFGWLPLRLRWM 145
Query 138 RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELR 197
RR LA PAGR LLALRALA +P KL ++ D AWRR D AT+ ALAALELR
Sbjct 146 RRAGAAKALAGVPAGRDLLALRALAGQPLSKLTRIAPDVAEAWRRGDDATVDALAALELR 205
Query 198 AAGI 201
G+
Sbjct 206 ELGL 209
>gi|302869273|ref|YP_003837910.1| hypothetical protein Micau_4825 [Micromonospora aurantiaca ATCC
27029]
gi|302572132|gb|ADL48334.1| hypothetical protein Micau_4825 [Micromonospora aurantiaca ATCC
27029]
Length=201
Score = 134 bits (337), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/184 (45%), Positives = 107/184 (59%), Gaps = 0/184 (0%)
Query 18 QLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVV 77
Q ++D+ V VW + L +HD + + G+++E G+A NLA AG R+P+V
Sbjct 14 QFLTDLLVVVWVYAAIRFALWLHDVVEKLAVPGQKLEGAGGGLADNLADAGGKVGRVPIV 73
Query 78 GDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFC 137
GD L+ P T A+ AA +A AG + G LA+ L +AV P+ V WL LRLR+
Sbjct 74 GDELTAPFTRAADAARSVAEAGRDQQELVGQLALGLTVAVLVFPLGLVLFGWLPLRLRWM 133
Query 138 RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELR 197
RR LA PAGR LLALRALA +P KL ++ D AWRR D AT+ ALAALELR
Sbjct 134 RRAGAAKALAGVPAGRDLLALRALAGQPLSKLTRIAPDVAEAWRRGDDATVDALAALELR 193
Query 198 AAGI 201
G+
Sbjct 194 ELGL 197
>gi|84496357|ref|ZP_00995211.1| possible conserved transmembrane protein [Janibacter sp. HTCC2649]
gi|84383125|gb|EAP99006.1| possible conserved transmembrane protein [Janibacter sp. HTCC2649]
Length=203
Score = 129 bits (323), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/194 (40%), Positives = 106/194 (55%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA PGR L Q+++D+ + W LW VG VHD + E GRQ++ G L AA
Sbjct 4 YADLPGRRLVQILADLGLLAWIALWAWVGRRVHDVTMALAEPGRQLQGAGAGFREKLNAA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
G +P++ D +++P +A+ A DI AG +L + A+++ A PIL +A+
Sbjct 64 GDGVDNLPLLDDRVASPFRSAAGAGTDIEKAGTDLISAVEKFALLIGWTTALVPILIIAI 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
W F R RF RR L ALRA+AN+P LA VS DP GAWRR D T
Sbjct 124 WWAFARGRFVRRASAAQKFIDADDDLDLFALRAMANQPMAALAKVSPDPSGAWRRGDRET 183
Query 188 MRALAALELRAAGI 201
+RALA LEL+ +G+
Sbjct 184 IRALALLELKDSGL 197
>gi|309811550|ref|ZP_07705330.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
gi|308434493|gb|EFP58345.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length=220
Score = 124 bits (311), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/199 (37%), Positives = 106/199 (54%), Gaps = 0/199 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA R Q+++D+ +A+W L + G VHD + +++E GS +A ++ A
Sbjct 6 YADRGSRRTRQIVADVALALWCVLAIWAGTVVHDRALVAQSGAQKLEHGSSSLALDMTDA 65
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
++P VG + P A+ A D+AG+GH+L T G AV+L + AA PI+ +
Sbjct 66 ANAVAKVPFVGSEVRTPFDKAAGTATDMAGSGHDLATGLGRFAVLLGVLTAALPIVLALV 125
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
PWL RLR+ + L + P GR+LLAL AL + P LAA+ D AW+ +DP
Sbjct 126 PWLLTRLRYAVTAGRLARLRSMPGGRRLLALEALTSASPRALAAIDDDVARAWQDDDPEA 185
Query 188 MRALAALELRAAGIPLRGD 206
R LA L L G+ LR D
Sbjct 186 TRKLADLSLATYGLRLRDD 204
>gi|317124971|ref|YP_004099083.1| hypothetical protein Intca_1844 [Intrasporangium calvum DSM 43043]
gi|315589059|gb|ADU48356.1| hypothetical protein Intca_1844 [Intrasporangium calvum DSM 43043]
Length=203
Score = 124 bits (310), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/198 (40%), Positives = 101/198 (52%), Gaps = 8/198 (4%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA T R QL+SD+ W W+ VG VHD I + + + G L A
Sbjct 4 YADTTARRTRQLLSDVLALAWVAAWLWVGRQVHDTILQLRAPADSLTSAGDSVHGALTGA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNL----DTTAGWLAVVLALAVAATPIL 123
G A R+PVVGD L + A+ + + AG + + A WL V+ AL PIL
Sbjct 64 GDQAGRLPVVGDDLETWLDRAAGSGTTLRNAGAEMAATVENVANWLGVLTAL----FPIL 119
Query 124 AVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRRE 183
V WL++R+RF RR T + L ALRALAN+P LA ++ DP GAWRR
Sbjct 120 TVGGLWLWVRVRFVRRATTAQRFIDSADDLDLFALRALANQPVTALARITPDPAGAWRRR 179
Query 184 DPATMRALAALELRAAGI 201
DP +RALA LELR G+
Sbjct 180 DPEAIRALAVLELRDQGL 197
>gi|296128352|ref|YP_003635602.1| hypothetical protein Cfla_0488 [Cellulomonas flavigena DSM 20109]
gi|296020167|gb|ADG73403.1| conserved hypothetical protein [Cellulomonas flavigena DSM 20109]
Length=206
Score = 122 bits (307), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/194 (43%), Positives = 110/194 (57%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA TP R L Q+++D+ V W LW+ VG VH+ + + GR +E ++ +LA+A
Sbjct 4 YAQTPWRRLRQVVADLLVVAWVVLWVQVGRGVHETVGRLASPGRTLEDAGTSLSESLASA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
G R+P+VGD P TAA AA IA AG + + LA++L + +AA PI V
Sbjct 64 GDTVARVPLVGDDARGPFTAAGGAADSIARAGVQVQDSVEQLALLLGVTIAAVPIALVVG 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
W +R RF RR + + A L ALRALA +P LA VS DP AWRR DP
Sbjct 124 VWWVVRTRFVRRAGAARRILDSAADLDLFALRALATQPVRALAGVSDDPAAAWRRGDPEV 183
Query 188 MRALAALELRAAGI 201
+ ALA+LELRA G+
Sbjct 184 VHALASLELRALGL 197
>gi|238060537|ref|ZP_04605246.1| hypothetical protein MCAG_01503 [Micromonospora sp. ATCC 39149]
gi|237882348|gb|EEP71176.1| hypothetical protein MCAG_01503 [Micromonospora sp. ATCC 39149]
Length=213
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/184 (47%), Positives = 112/184 (61%), Gaps = 0/184 (0%)
Query 18 QLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVV 77
QL++D+ V W + L VHD + + G+++E G+A +LA AG R+P+V
Sbjct 26 QLLTDLLVLAWVYATIRFALWVHDLVRKLAVPGQKLEGAGGGLADSLADAGGKVGRVPLV 85
Query 78 GDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFC 137
GD L+ P T A+ AA +A AG + G LA+ L++AV P+ V WL LRLR+
Sbjct 86 GDELTAPFTKAADAARAVAEAGRDQQELVGQLALALSIAVLVLPLGLVLFGWLPLRLRWM 145
Query 138 RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELR 197
RR + LA PAGR LLALRALAN+P GKLA V+ D AWRR D AT+ ALAALELR
Sbjct 146 RRAASAKALATAPAGRDLLALRALANQPLGKLARVAPDVAEAWRRGDDATVDALAALELR 205
Query 198 AAGI 201
G+
Sbjct 206 RLGL 209
>gi|330469577|ref|YP_004407320.1| hypothetical protein VAB18032_28246 [Verrucosispora maris AB-18-032]
gi|328812548|gb|AEB46720.1| hypothetical protein VAB18032_28246 [Verrucosispora maris AB-18-032]
Length=203
Score = 109 bits (272), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/186 (40%), Positives = 106/186 (57%), Gaps = 0/186 (0%)
Query 16 LAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIP 75
L Q+ +D+ V W + L +HD + + G+++E G+A NLA AG R+P
Sbjct 3 LRQVFTDLFVVAWVYGTIRCALWLHDLVQRLAVPGQKLEGAGGGLADNLAEAGGKVGRVP 62
Query 76 VVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLR 135
+VGD L+ P A+ AA +A AG + LA+ L++ + P+ V WL LR+R
Sbjct 63 LVGDELTAPFERAADAARSLAEAGRDQQELVDQLALALSVGMMIVPLGLVLFGWLPLRVR 122
Query 136 FCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALE 195
+ RR + TLAA PAG+ LLALRALAN+P +L ++ D AWR D T+ ALA LE
Sbjct 123 WMRRAGSAATLAAAPAGQDLLALRALANQPLRRLTRINPDVAQAWRDGDEHTITALATLE 182
Query 196 LRAAGI 201
LR G+
Sbjct 183 LRHLGL 188
>gi|326332181|ref|ZP_08198461.1| hypothetical protein NBCG_03621 [Nocardioidaceae bacterium Broad-1]
gi|325949887|gb|EGD41947.1| hypothetical protein NBCG_03621 [Nocardioidaceae bacterium Broad-1]
Length=222
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/194 (32%), Positives = 100/194 (52%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA TP R +AQL +D+ W W+L+G VH+ +S + G +++ ++ + A
Sbjct 19 YADTPSRRVAQLFADLLTVAWIVGWVLLGKLVHELVSALAVPGEKMDEAGTSLSAKMLEA 78
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
+P+V D ++ P A++AA + AG +A+ LA+AV P+L +
Sbjct 79 AGRVDDLPLVKDGIAAPFEGAAKAADQLRAAGEAQVDAVSTIAIGLAIAVVVVPVLMWLL 138
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
++ LR RF R + G L+ALRA++ +P KL ++ DPV AWR D
Sbjct 139 VYVPLRWRFIRTATSTQRFLEAGTGADLVALRAMSTQPLHKLVKITDDPVRAWRDGDADV 198
Query 188 MRALAALELRAAGI 201
+ LA LELR+ G+
Sbjct 199 VAKLAELELRSVGL 212
>gi|254381009|ref|ZP_04996374.1| hypothetical protein SSAG_00676 [Streptomyces sp. Mg1]
gi|194339919|gb|EDX20885.1| hypothetical protein SSAG_00676 [Streptomyces sp. Mg1]
Length=201
Score = 101 bits (251), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/200 (40%), Positives = 110/200 (55%), Gaps = 4/200 (2%)
Query 5 FLPYATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNL 64
L YA TP R Q+++D+ V + + LAVH AI ++ E GR++E G+A L
Sbjct 1 MLLYAQTPARRTRQILADLIAVVLIAVAVRFALAVHGAIMMLAEPGRKVESSGEGLASAL 60
Query 65 AAAGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILA 124
AG A ++P+VG L P +A+ A IA AG +L LA ++ LA+ P++
Sbjct 61 DDAGATASKVPLVGGLLEKPFQSAADAGTGIADAGQSLQDAVSQLATLVTLALIVVPVVF 120
Query 125 VAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVG---AWR 181
V + WL LRLR+ RR TV L P G LLALRAL PPG+L+ + G AWR
Sbjct 121 VLLLWLPLRLRWIRRSATVRRLLDAPGGADLLALRALTG-PPGELSTIPAPQGGLADAWR 179
Query 182 REDPATMRALAALELRAAGI 201
R D + AL+ + LR AG+
Sbjct 180 RGDRQVIAALSEITLRRAGL 199
>gi|256825349|ref|YP_003149309.1| hypothetical protein Ksed_15240 [Kytococcus sedentarius DSM 20547]
gi|256688742|gb|ACV06544.1| hypothetical protein Ksed_15240 [Kytococcus sedentarius DSM 20547]
Length=209
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/198 (36%), Positives = 97/198 (49%), Gaps = 3/198 (1%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHD-AISIIGEAGRQIEIGSHGIAGNLAA 66
Y+ P R Q+++D+ V WT +W+L+G AVH + AGR +E G I +
Sbjct 4 YSAAPARRSLQVLADLLVVGWTVMWVLIGRAVHHRTLERFEPAGRLVETGDR-INDGVTT 62
Query 67 AGQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVA 126
A +P VGD+LS + +A G +L + LA +L + V+A PI+
Sbjct 63 ADDQLADLPWVGDSLSGVLDGLLGVGDPVAQTGQDLLASGESLADMLWMVVSAGPIITAL 122
Query 127 MPWLFLRLRFC-RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDP 185
WL RL F R T L LLALR LA P G LAA+ DP+ AWRR DP
Sbjct 123 AVWLPFRLHFLLRSTTTAANLRRVDDPEALLALRGLATLPLGTLAAIDRDPLEAWRRGDP 182
Query 186 ATMRALAALELRAAGIPL 203
+R LA + R G+ L
Sbjct 183 VVVRELAEAQARTLGVQL 200
>gi|170783240|ref|YP_001711574.1| hypothetical protein CMS_2944 [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157810|emb|CAQ03015.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
sepedonicus]
Length=201
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/184 (40%), Positives = 99/184 (54%), Gaps = 0/184 (0%)
Query 18 QLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVV 77
Q+ +D + +LVG+AV I +G+ GR +E ++G++ A R+P+V
Sbjct 14 QIAADTAALAGIVVSVLVGIAVAALIRPLGDLGRSMEESGTRLSGSMTDAADALGRLPLV 73
Query 78 GDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFC 137
GDA P AS + AG + + G +A+VL L VA PI + WL R+ F
Sbjct 74 GDAARGPFEDASGIGSGLVQAGRDQQSLVGTIALVLGLLVALVPIAFIVRHWLLRRISFV 133
Query 138 RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELR 197
RR +LAATP G +LLALRAL++R P L DPV AWR DP +R LA L LR
Sbjct 134 RRAAAARSLAATPGGTELLALRALSSRKPASLLKAHPDPVAAWRAGDPRVVRQLADLALR 193
Query 198 AAGI 201
AG+
Sbjct 194 DAGV 197
>gi|88856269|ref|ZP_01130929.1| hypothetical protein A20C1_03196 [marine actinobacterium PHSC20C1]
gi|88814588|gb|EAR24450.1| hypothetical protein A20C1_03196 [marine actinobacterium PHSC20C1]
Length=204
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/194 (33%), Positives = 99/194 (52%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA P R QL SDI V+ +W+ +G+ V+ IS + G Q++ G +
Sbjct 4 YADHPPRRARQLASDIISLVFIVVWIALGIWVYQLISAFQQLGVQMQEAGAGFKSTMVEL 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
G +P++G + P AS A + AG + T A+ + L +A PI+ + +
Sbjct 64 GDTLGSVPLIGSGIRVPFDGASDAGAALESAGQSQQDTVIATAMTVGLVIAIVPIVLILL 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
WL R+RF RR L ++P G LLALRAL+ + +LA ++ D V WR D +T
Sbjct 124 VWLLPRIRFARRVAEAKNLLSSPGGADLLALRALSTQKLSELAEIAPDAVSLWRAGDAST 183
Query 188 MRALAALELRAAGI 201
+ LA L+LR+ G+
Sbjct 184 VARLAQLQLRSLGV 197
>gi|148274035|ref|YP_001223596.1| hypothetical protein CMM_2851 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831965|emb|CAN02936.1| unnamed protein product [Clavibacter michiganensis subsp. michiganensis
NCPPB 382]
Length=201
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/194 (39%), Positives = 102/194 (53%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
Y+ P Q+ +D + +LVG+AV I +G+ GR +E ++G++ A
Sbjct 4 YSALPLVRARQIAADTAALAGIVVSVLVGIAVAALIRPLGDLGRSMEESGTRLSGSMTDA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
R+P+VGDA P AS + AG + + G +A+VL L VA PI +
Sbjct 64 ADALGRLPLVGDAARGPFEDASGIGSGLVQAGRDQQSLVGTIALVLGLLVALVPIAFIVR 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
WL R+ F RR +LAATP G +LLALRAL++R P L DPV AWR DP
Sbjct 124 HWLLRRVSFVRRAAAARSLAATPGGTELLALRALSSRKPAALLRTHPDPVAAWRAGDPRV 183
Query 188 MRALAALELRAAGI 201
+R LA L LR AG+
Sbjct 184 VRQLADLALRDAGV 197
>gi|284029642|ref|YP_003379573.1| hypothetical protein Kfla_1679 [Kribbella flavida DSM 17836]
gi|283808935|gb|ADB30774.1| hypothetical protein Kfla_1679 [Kribbella flavida DSM 17836]
Length=213
Score = 95.1 bits (235), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/194 (37%), Positives = 99/194 (52%), Gaps = 0/194 (0%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
Y+ + Q++ D+ + W +GLAV + +G GR+ G+A +L
Sbjct 4 YSAVGSQRFWQVVGDLLLIGWIAFCTALGLAVFRITNALGYPGRKAAAAGDGLAADLRKM 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
+ ++PVVGD L P+ A+ AA +A AG + LA +LA P+L +
Sbjct 64 SEPIGKVPVVGDELRAPVDGAAGAAGRLAEAGRDQAHAVEQLAYLLAGVTIGLPVLFALL 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
WL R+RF RR A +L ALRA+AN+P KLA +S DPV AWR DPA
Sbjct 124 IWLPRRIRFSRRATAAQKFIDNAADLELFALRAMANQPMHKLAKISDDPVTAWRERDPAV 183
Query 188 MRALAALELRAAGI 201
+ LA LELRA G+
Sbjct 184 IARLADLELRATGL 197
>gi|297196711|ref|ZP_06914109.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197720073|gb|EDY63981.1| conserved hypothetical protein [Streptomyces pristinaespiralis
ATCC 25486]
Length=231
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/197 (36%), Positives = 97/197 (50%), Gaps = 4/197 (2%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA P R Q++ D+ L + V D I ++ E GR++E G+A L
Sbjct 34 YAEIPARRNRQVLVDLIAVALIALTVWAAFFVRDMIMLLAEPGRKVESSGDGLAEELGNV 93
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
G A +P++GD L P+ +A+ A+ A AG +L T +A V A A+ P+L + +
Sbjct 94 GDAASDVPLIGDVLQQPLQSAADASTGFADAGASLQETVAQVADVTATALIVLPVLLILV 153
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVG---AWRRED 184
WL RL + R TV LA P G LLALRAL P L + T P G AWRR D
Sbjct 154 LWLPPRLLWIRHSMTVRRLADAPGGADLLALRALTGS-PAALVKLPTPPGGFADAWRRGD 212
Query 185 PATMRALAALELRAAGI 201
+ L+A+ L G+
Sbjct 213 QEAIATLSAVALAHTGL 229
>gi|297562483|ref|YP_003681457.1| hypothetical protein Ndas_3550 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296846931|gb|ADH68951.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length=202
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/188 (35%), Positives = 95/188 (51%), Gaps = 2/188 (1%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA P R Q SD+ A W W+ LA+ + + + G + G + ++ +A
Sbjct 4 YAEYPVRAFLQFASDLLAAAWVYAWVSAALALRETLMALSRPGELMVSTGEGFSEHMNSA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
+ A+++P+ G+AL+ P T+ S+ + AG + T LA+ L L A P+L +A
Sbjct 64 AEQARQVPLAGEALATPFTSMSETGESLTAAGTSFQETVASLALTLPLLTAVLPLLLLAA 123
Query 128 PWLFLRLRFCRRKWTVTTLA--ATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDP 185
WL LR R+ R L A A +LLALRAL + P +LA DP GAWR D
Sbjct 124 TWLPLRARWVRHASAARRLRGLAPEARSRLLALRALTSASPSRLAGTHEDPAGAWRSGDR 183
Query 186 ATMRALAA 193
T+ ALAA
Sbjct 184 GTVEALAA 191
>gi|152968244|ref|YP_001364028.1| transmembrane protein [Kineococcus radiotolerans SRS30216]
gi|151362761|gb|ABS05764.1| putative transmembrane protein [Kineococcus radiotolerans SRS30216]
Length=176
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/168 (40%), Positives = 95/168 (57%), Gaps = 0/168 (0%)
Query 34 LVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVVGDALSNPITAASQAAL 93
+ G AVH A + + R GS +AG L+AAG A P++GD L+ + +++ +A
Sbjct 1 MAGRAVHGAAASVAAPARGFSAGSRDLAGRLSAAGDAASGTPLIGDDLAGVLGSSAASAS 60
Query 94 DIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGR 153
+A A +A LA +L + A PI V L R+R+ R L+A+PAG
Sbjct 61 SLARAADAQVRSALELATLLGVLTALVPIALVTAVRLLQRVRWARAARRARGLSASPAGE 120
Query 154 QLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELRAAGI 201
++LALRAL R P +L AV DP AW+ +DPA +RALA LELRA G+
Sbjct 121 RVLALRALQRRAPEQLLAVHPDPAAAWQAQDPAAVRALADLELRALGV 168
>gi|256379479|ref|YP_003103139.1| hypothetical protein Amir_5475 [Actinosynnema mirum DSM 43827]
gi|255923782|gb|ACU39293.1| hypothetical protein Amir_5475 [Actinosynnema mirum DSM 43827]
Length=217
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/199 (35%), Positives = 100/199 (51%), Gaps = 11/199 (5%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
Y+ P R QL +D+ WT W+ L V D++ + G ++ G+ A
Sbjct 4 YSDRPDRFALQLAADLVAVAWTWFWIDFALGVRDSVLTLRTTGEELIGAGQGLGDTFRDA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHN----LDTTAGWLAVVLALAVAATPIL 123
A+ +P+VGD L++ + A + GAG ++TTA WLAV A A P+
Sbjct 64 ADRARGMPLVGDDLASALQRGQDAGTSVVGAGQAQIEAVETTALWLAV----AFVALPVA 119
Query 124 AVAMPWLFLRLRFCRRKWTVTTLAATPAGRQ-LLALRALANRPPGKLAAVSTDPVGAWRR 182
+ + WL LR RF RR AGR+ LLAL AL N +LAA DP+ WRR
Sbjct 120 FLLITWLPLRYRFARR--ATAARTLRDAGREDLLALHALNNLDLRQLAAFDGDPLEGWRR 177
Query 183 EDPATMRALAALELRAAGI 201
+DP + LAA +LR++G+
Sbjct 178 QDPEIIAQLAARQLRSSGV 196
>gi|300786218|ref|YP_003766509.1| hypothetical protein AMED_4334 [Amycolatopsis mediterranei U32]
gi|299795732|gb|ADJ46107.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340527688|gb|AEK42893.1| hypothetical protein RAM_22065 [Amycolatopsis mediterranei S699]
Length=207
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/199 (32%), Positives = 93/199 (47%), Gaps = 10/199 (5%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA P R AQL+SD+ + + + +V+D + + G + G+ G +A
Sbjct 4 YAERPVRRTAQLVSDLLAVLLVVFAVWLATSVYDQVMKLRAPGDGLVDAGTGLRGTFDSA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGH----NLDTTAGWLAVVLALAVAATPIL 123
A RIP+VGD+L+ + S + AGH ++ A W+A + + A P+L
Sbjct 64 ANSAGRIPLVGDSLAKALHGGSDVGTKLTDAGHWQIEAVENLAWWMAAI----IIALPVL 119
Query 124 AVAMPWLFLRLRFCRRKWTVTTLAAT-PAGRQLLALRALANRPPGKLAAVSTDPVGAWRR 182
+ + WL LR F RR L A G LLALRAL +P G+LA S + WR
Sbjct 120 TLVVTWLPLRWHFTRRATAAARLRALGDEGLDLLALRALTTQPLGRLAK-SGELATGWRE 178
Query 183 EDPATMRALAALELRAAGI 201
D + LA EL G+
Sbjct 179 RDRDVIEKLAGHELARHGL 197
>gi|134099354|ref|YP_001105015.1| hypothetical protein SACE_2811 [Saccharopolyspora erythraea NRRL
2338]
gi|291007260|ref|ZP_06565233.1| hypothetical protein SeryN2_22287 [Saccharopolyspora erythraea
NRRL 2338]
gi|133911977|emb|CAM02090.1| hypothetical protein SACE_2811 [Saccharopolyspora erythraea NRRL
2338]
Length=209
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/184 (31%), Positives = 81/184 (45%), Gaps = 2/184 (1%)
Query 18 QLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAAGQDAQRIPVV 77
Q++ D+ W + A+ D++ +G GR++ + A A ++P V
Sbjct 14 QVVFDLLAIAWIAGGIWWAFALRDSVLELGAPGRKLIDAGANLERTFGRASASADQVPFV 73
Query 78 GDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAMPWLFLRLRFC 137
G L+ + + A +A AGHN W A A V A +L WL R+R+
Sbjct 74 GAELAGALDLGTDAGKVVAEAGHNQVEAVAWAAGAAAAGVVAVVLLVALPFWLLPRVRYA 133
Query 138 RRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPATMRALAALELR 197
R + A LLALRAL PP +L VS DP AWR D + LA+L L
Sbjct 134 RAATVAVNM--RTAAPDLLALRALTELPPSRLMEVSADPAAAWRDNDREIIEQLASLRLG 191
Query 198 AAGI 201
A G+
Sbjct 192 ALGL 195
>gi|284991424|ref|YP_003409978.1| hypothetical protein Gobs_2997 [Geodermatophilus obscurus DSM
43160]
gi|284064669|gb|ADB75607.1| conserved hypothetical protein [Geodermatophilus obscurus DSM
43160]
Length=214
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/195 (38%), Positives = 103/195 (53%), Gaps = 2/195 (1%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA +P QL +D+ + W LW+LV VH A+ + E GR +E +A ++++A
Sbjct 4 YAPSPALRGRQLAADVGLLAWLVLWVLVARTVHGAVLALAEPGRAVEDLGASVADSMSSA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
Q A+ +PVVGD L+ P A A + GAG G LA VLA+ + P+ + +
Sbjct 64 AQAAEDVPVVGDELAAPFEALGSAGGSVGGAGQAAQDAVGTLATVLAVVLVVLPVGWLLL 123
Query 128 PWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRREDPAT 187
WL RL + R LA A +LA RALA P +LAA+ GAWR +PA
Sbjct 124 RWLPWRLAWVRDVGVARKLAV--ADPDVLAARALATAPLTRLAALPPGTAGAWRAGEPAA 181
Query 188 MRALAALELRAAGIP 202
RALAA+EL G+P
Sbjct 182 TRALAAVELERLGVP 196
>gi|72161357|ref|YP_289014.1| hypothetical protein Tfu_0953 [Thermobifida fusca YX]
gi|71915089|gb|AAZ54991.1| conserved hypothetical protein [Thermobifida fusca YX]
Length=214
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/196 (35%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA P R QL D+ W L + +A+H A++ + G + G+A ++A+A
Sbjct 4 YADRPLRRALQLGGDLLALAWIALGVWTAVALHRALAALARPGVLLHDAGDGLASHMASA 63
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVAATPILAVAM 127
+ A+ +P VGD L+ P+ D++ AG L TA A++ A+AVA +
Sbjct 64 AEAARNVPFVGDDLAAPLARLEATGDDLSAAGTGLQQTAAEFALLTAVAVAVLAVAVALG 123
Query 128 PWLFLRLRFCRRKWTVTTLAATP--AGRQLLALRALANRPPGKLAAVSTDPVGAWRREDP 185
WL +RLR+ R+ L P AG +LLALRAL P L + DP AWR D
Sbjct 124 AWLPVRLRWIRQASQARQLTRLPGEAGTRLLALRALTAAPVPALCRLHDDPAEAWRSGDE 183
Query 186 ATMRALAALELRAAGI 201
+ LAALELR G+
Sbjct 184 RVVAELAALELRRLGL 199
>gi|302519061|ref|ZP_07271403.1| conserved hypothetical protein [Streptomyces sp. SPB78]
gi|318076387|ref|ZP_07983719.1| hypothetical protein SSA3_06598 [Streptomyces sp. SA3_actF]
gi|302427956|gb|EFK99771.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=182
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/217 (32%), Positives = 90/217 (42%), Gaps = 68/217 (31%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA PGR QL D+ + W T W +H + GIA L+AA
Sbjct 3 YAQNPGRAARQLAGDLALLAWVTTWAFGAAVLHQL--------------AGGIAARLSAA 48
Query 68 G---------QDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVA 118
G + AQ + + D + P +L T AG LAV L +A
Sbjct 49 GPASWWRLLPKPAQDMLSLVDPVQWP----------------HLVTAAG-LAVFL---LA 88
Query 119 ATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRP------------- 165
+ P + W+ R+R+ RR LAA+ GR+LLALRAL RP
Sbjct 89 SVPAIGW---WVPRRMRWHRRASAAHALAASEDGRELLALRAL-MRPLDDVGRTATLTGA 144
Query 166 -PGKLAAVSTDPVGAWRREDPATMRALAALELRAAGI 201
PG+LA WR DPAT+ ALA ELR G+
Sbjct 145 TPGRLAE-------GWRDADPATLEALAGAELRRLGL 174
>gi|333027112|ref|ZP_08455176.1| hypothetical protein STTU_4616 [Streptomyces sp. Tu6071]
gi|332746964|gb|EGJ77405.1| hypothetical protein STTU_4616 [Streptomyces sp. Tu6071]
Length=182
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 69/217 (32%), Positives = 90/217 (42%), Gaps = 68/217 (31%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA PGR QL D+ + W T W +H + GIA L+AA
Sbjct 3 YAQNPGRAARQLAGDLALLAWVTTWAFGAAVLHQL--------------AGGIAARLSAA 48
Query 68 G---------QDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTTAGWLAVVLALAVA 118
G + AQ + + D + P +L T AG LAV L +A
Sbjct 49 GPASWWRLLPKPAQDMLSLIDPVQWP----------------HLVTAAG-LAVFL---LA 88
Query 119 ATPILAVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRP------------- 165
+ P + W+ R+R+ RR LAA+ GR+LLALRAL RP
Sbjct 89 SVPAIGW---WVPRRMRWHRRASAAHALAASEDGRELLALRAL-MRPLDDVGRTATLTGA 144
Query 166 -PGKLAAVSTDPVGAWRREDPATMRALAALELRAAGI 201
PG+LA WR DPAT+ ALA ELR G+
Sbjct 145 TPGRLAE-------GWRDADPATLEALAGAELRRLGL 174
>gi|152966612|ref|YP_001362396.1| hypothetical protein Krad_2660 [Kineococcus radiotolerans SRS30216]
gi|151361129|gb|ABS04132.1| conserved hypothetical protein [Kineococcus radiotolerans SRS30216]
Length=237
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/198 (27%), Positives = 85/198 (43%), Gaps = 8/198 (4%)
Query 8 YATTPGRLLAQLISDITVAVWTTLWMLVGLAVHDAISIIGEAGRQIEIGSHGIAGNLAAA 67
YA R Q ++D + W + +G V A++ E R I ++A +
Sbjct 5 YAELAHRRNLQFVADALLLTWIAGAVWLGRHVEQALAAPAETLRANTTNLAKIGDDVADS 64
Query 68 GQDAQRIPVVGDALSNPITAASQAALDIAGAGHNLDTT----AGWLAVVLALAVAATPIL 123
Q +P++GD LS P++ + +A ++ ++ T A W +V + +L
Sbjct 65 AQSVGNLPLIGDRLSAPVSQVADSAQQLSSTARSVSDTLQDVARWAGLVTTTVLLVLALL 124
Query 124 AVAMPWLFLRLRFCRRKWTVTTLAATPAGRQLLALRALANRPPGKLAAVSTDPVGAWRRE 183
P RL F + + P +LLALRAL P +L + DPV AW R
Sbjct 125 LWLPP----RLHFVLGATRLRRIMRRPGALELLALRALTTAPLAQLRHLGEDPVAAWTRH 180
Query 184 DPATMRALAALELRAAGI 201
DP + LA + +R G+
Sbjct 181 DPLVLPLLADMAVRPYGL 198
Lambda K H
0.323 0.134 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 233186096862
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40