BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0811c Length=368 Score E Sequences producing significant alignments: (Bits) Value gi|15607951|ref|NP_215326.1| hypothetical protein Rv0811c [Mycob... 712 0.0 gi|289446375|ref|ZP_06436119.1| conserved hypothetical protein [... 708 0.0 gi|340625826|ref|YP_004744278.1| hypothetical protein MCAN_08121... 707 0.0 gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_2924... 587 1e-165 gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 ... 583 2e-164 gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (amin... 576 2e-162 gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Myc... 572 4e-161 gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminom... 564 7e-159 gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (amin... 562 4e-158 gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Myc... 561 6e-158 gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Myco... 561 7e-158 gi|342860284|ref|ZP_08716935.1| glycine cleavage T-protein (amin... 546 3e-153 gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycoba... 540 1e-151 gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203... 539 3e-151 gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminom... 506 3e-141 gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminom... 506 3e-141 gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-t... 491 1e-136 gi|333992189|ref|YP_004524803.1| hypothetical protein JDM601_354... 488 6e-136 gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminom... 488 8e-136 gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (ami... 484 9e-135 gi|325674774|ref|ZP_08154461.1| folate-binding protein YgfZ [Rho... 384 2e-104 gi|226308307|ref|YP_002768267.1| hypothetical protein RER_48200 ... 383 3e-104 gi|312138308|ref|YP_004005644.1| glycine cleavage protein t [Rho... 381 9e-104 gi|229489142|ref|ZP_04383008.1| glycine cleavage T-protein [Rhod... 380 2e-103 gi|111021816|ref|YP_704788.1| hypothetical protein RHA1_ro04845 ... 371 8e-101 gi|54022550|ref|YP_116792.1| hypothetical protein nfa5830 [Nocar... 367 1e-99 gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c ... 367 2e-99 gi|333918376|ref|YP_004491957.1| hypothetical protein AS9A_0704 ... 361 1e-97 gi|226364338|ref|YP_002782120.1| hypothetical protein ROP_49280 ... 357 2e-96 gi|326384540|ref|ZP_08206219.1| folate-binding protein YgfZ [Gor... 343 2e-92 gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Go... 339 5e-91 gi|343925902|ref|ZP_08765417.1| hypothetical protein GOALK_050_0... 336 4e-90 gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amy... 321 1e-85 gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Sa... 318 8e-85 gi|134103536|ref|YP_001109197.1| glycine cleavage T protein (ami... 301 2e-79 gi|302531017|ref|ZP_07283359.1| glycine cleavage T protein [Stre... 299 4e-79 gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Ac... 295 6e-78 gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Ts... 293 3e-77 gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Ps... 280 3e-73 gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Na... 277 2e-72 gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pse... 269 7e-70 gi|158317892|ref|YP_001510400.1| glycine cleavage T protein (ami... 260 3e-67 gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Fr... 258 8e-67 gi|288920191|ref|ZP_06414507.1| folate-binding protein YgfZ [Fra... 257 3e-66 gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (ami... 252 6e-65 gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (ami... 250 2e-64 gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Fr... 250 3e-64 gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Ge... 248 8e-64 gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Cory... 246 5e-63 gi|86739182|ref|YP_479582.1| glycine cleavage T protein (aminome... 245 9e-63 >gi|15607951|ref|NP_215326.1| hypothetical protein Rv0811c [Mycobacterium tuberculosis H37Rv] gi|15840223|ref|NP_335260.1| hypothetical protein MT0832 [Mycobacterium tuberculosis CDC1551] gi|31791999|ref|NP_854492.1| hypothetical protein Mb0834c [Mycobacterium bovis AF2122/97] 76 more sequence titles Length=368 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/368 (99%), Positives = 368/368 (100%), Gaps = 0/368 (0%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 +AAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST Sbjct 1 MAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM Sbjct 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL Sbjct 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW Sbjct 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV Sbjct 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV Sbjct 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 Query 361 ERLRGGIR 368 ERLRGGIR Sbjct 361 ERLRGGIR 368 >gi|289446375|ref|ZP_06436119.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419333|gb|EFD16534.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=368 Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/368 (99%), Positives = 367/368 (99%), Gaps = 0/368 (0%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 +AAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST Sbjct 1 MAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM Sbjct 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL Sbjct 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW Sbjct 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV Sbjct 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVVEHVELGPVALALLK+GLPGDTALVT PEAEVAAVIDVDSLPPADDVGAGRRAV Sbjct 301 GRLGTVVEHVELGPVALALLKQGLPGDTALVTCPEAEVAAVIDVDSLPPADDVGAGRRAV 360 Query 361 ERLRGGIR 368 ERLRGGIR Sbjct 361 ERLRGGIR 368 >gi|340625826|ref|YP_004744278.1| hypothetical protein MCAN_08121 [Mycobacterium canettii CIPT 140010059] gi|340004016|emb|CCC43152.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=368 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/368 (99%), Positives = 367/368 (99%), Gaps = 0/368 (0%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 +AAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST Sbjct 1 MAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM Sbjct 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTPRAADMAVLSLLGPRLAE+RVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL Sbjct 121 VTPRAADMAVLSLLGPRLAEQRVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW Sbjct 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLD SVQRPSTGDAVLAGGRTV Sbjct 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVQRPSTGDAVLAGGRTV 300 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV Sbjct 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 Query 361 ERLRGGIR 368 ERLRGGIR Sbjct 361 ERLRGGIR 368 >gi|240173436|ref|ZP_04752094.1| hypothetical protein MkanA1_29246 [Mycobacterium kansasii ATCC 12478] Length=363 Score = 587 bits (1513), Expect = 1e-165, Method: Compositional matrix adjust. Identities = 299/368 (82%), Positives = 329/368 (90%), Gaps = 5/368 (1%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 + AVPAPDPGPDAGAIWHYGDPLGEQRA + ++V VDRSHRAV+TL G DRQTWLHSIST Sbjct 1 MTAVPAPDPGPDAGAIWHYGDPLGEQRAAETESVFVDRSHRAVITLTGKDRQTWLHSIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVSDLPEGAST+NLSLDGQGRVEDHWIQTEL TTYLDTEPWRGEPLL+YLRKMVFW+ Sbjct 61 QHVSDLPEGASTENLSLDGQGRVEDHWIQTELADTTYLDTEPWRGEPLLSYLRKMVFWAA 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTP AAD+AVLSLLGPRLA+ VLD +GLD LP+E AVPLAGGG VRRMP AGQIEL Sbjct 121 VTPEAADLAVLSLLGPRLADRAVLDVVGLDALPSEMAAVPLAGGGFVRRMP-APAGQIEL 179 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R D ADWQ RLTQAGVRPAG+W YEAHRVA ARRPRLGVDTDERTIPHEVGW Sbjct 180 DLLVPREDCADWQHRLTQAGVRPAGVWTYEAHRVA----ARRPRLGVDTDERTIPHEVGW 235 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARVHNLG+PPRMLVLLHLD S RPSTGDAV+AGGR V Sbjct 236 IGGPGLGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGSGDRPSTGDAVMAGGRAV 295 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GR+GTVVEHV+LGPVALAL+KRGLP DT L+TGP+A++AAVID +S+PPAD+VGAGR AV Sbjct 296 GRVGTVVEHVDLGPVALALVKRGLPADTELMTGPDADIAAVIDAESVPPADEVGAGRLAV 355 Query 361 ERLRGGIR 368 ERLR G++ Sbjct 356 ERLRRGVQ 363 >gi|183984846|ref|YP_001853137.1| hypothetical protein MMAR_4878 [Mycobacterium marinum M] gi|183178172|gb|ACC43282.1| conserved hypothetical protein [Mycobacterium marinum M] Length=363 Score = 583 bits (1502), Expect = 2e-164, Method: Compositional matrix adjust. Identities = 295/368 (81%), Positives = 328/368 (90%), Gaps = 5/368 (1%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVPAPDPGPDAGAIWHYGDPLGEQRA + AVLVDRSHRAVLTL G DRQ+WLH+IST Sbjct 1 MSAVPAPDPGPDAGAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTLTGKDRQSWLHNIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS+LPEGASTQNLSLDGQGRVEDHWIQTELG TTYLDTEPWRGEPLL YLRKMVFW+ Sbjct 61 QHVSELPEGASTQNLSLDGQGRVEDHWIQTELGATTYLDTEPWRGEPLLNYLRKMVFWAE 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTP AD+AVLSL+GP+L+++ VLDALGLD LPA+ +AVPL GGG RRMP AGQIEL Sbjct 121 VTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLMAVPLPGGGFARRMPSS-AGQIEL 179 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V RGD ADW+ RLTQAGVRPAGIW YEAHRVA A+RPRLGVDTDERTIPHEVGW Sbjct 180 DLLVPRGDTADWKHRLTQAGVRPAGIWTYEAHRVA----AKRPRLGVDTDERTIPHEVGW 235 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARVHNLG+PPRMLVLLHLD S RPSTGD+VLAGGR+V Sbjct 236 IGGPGIGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGSTDRPSTGDSVLAGGRSV 295 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GR+GTVV+HV+LGPVALAL+KRGLP DTAL+TG EA + A+ID SLPPAD+VGAGR A+ Sbjct 296 GRVGTVVDHVDLGPVALALVKRGLPADTALMTGAEATIPALIDAQSLPPADEVGAGRLAL 355 Query 361 ERLRGGIR 368 +RLRG R Sbjct 356 DRLRGSAR 363 >gi|254821042|ref|ZP_05226043.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium intracellulare ATCC 13950] Length=364 Score = 576 bits (1485), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 296/363 (82%), Positives = 319/363 (88%), Gaps = 5/363 (1%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 VPAPD GPDAGA+WHYGDPLGEQRA + DA++VDRSHR VLTL G DRQTWLHSISTQHV Sbjct 5 VPAPDSGPDAGAVWHYGDPLGEQRAAETDAIVVDRSHRGVLTLTGNDRQTWLHSISTQHV 64 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP 123 S+LPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWR PLL YLRKMVFWS VTP Sbjct 65 SNLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRAAPLLEYLRKMVFWSEVTP 124 Query 124 RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVV 183 AD+AVLSLLGPRLA++ +LDALG+D LPAE AVPL GG VRRMP AG +ELD+V Sbjct 125 SDADLAVLSLLGPRLADQTILDALGVDALPAELSAVPL-DGGFVRRMPGTPAGSVELDLV 183 Query 184 VKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG 243 V RGD DW+ RL+QAGVRP G+WAYEAHRVA A RPRLGVDTDERTIPHEVGWIGG Sbjct 184 VPRGDAGDWRNRLSQAGVRPGGVWAYEAHRVA----AVRPRLGVDTDERTIPHEVGWIGG 239 Query 244 PGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRL 303 PG GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD SV+RPSTGD VLAGGR VGRL Sbjct 240 PGEGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVERPSTGDPVLAGGRAVGRL 299 Query 304 GTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERL 363 GTVV+HV+LGP+ALALLKRGLP +T L TGPEA VAAVIDVDSLPP + +GAGR AVERL Sbjct 300 GTVVDHVDLGPIALALLKRGLPAETELATGPEAAVAAVIDVDSLPPTEQIGAGRLAVERL 359 Query 364 RGG 366 RGG Sbjct 360 RGG 362 >gi|118616273|ref|YP_904605.1| hypothetical protein MUL_0420 [Mycobacterium ulcerans Agy99] gi|118568383|gb|ABL03134.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=363 Score = 572 bits (1474), Expect = 4e-161, Method: Compositional matrix adjust. Identities = 291/368 (80%), Positives = 323/368 (88%), Gaps = 5/368 (1%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVPAPDPGPDAGAIWHYGDPLGEQRA + AVLVDRSHRAVLTL G DRQ+WLH+IST Sbjct 1 MSAVPAPDPGPDAGAIWHYGDPLGEQRAAETGAVLVDRSHRAVLTLTGKDRQSWLHNIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS+LPEGASTQNLSLDGQGRVEDHWIQTELG TTYLDTEPWRGEPLL YLRKMVFW+ Sbjct 61 QHVSELPEGASTQNLSLDGQGRVEDHWIQTELGATTYLDTEPWRGEPLLNYLRKMVFWAE 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTP AD+AVLSL+GP+L+++ VLDALGLD LPA+ +AVPL GGG RRMP AGQIEL Sbjct 121 VTPDTADLAVLSLIGPQLSDQAVLDALGLDALPADLMAVPLPGGGFARRMPSS-AGQIEL 179 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R ADW+ RLTQAGVRPAGIW YEAHRVA A+RPRLGVDTDERTIPHEVGW Sbjct 180 DLLVPRDGTADWKHRLTQAGVRPAGIWTYEAHRVA----AKRPRLGVDTDERTIPHEVGW 235 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARV NLG+PPRMLVLLHLD S RPSTGD+VLAG R+V Sbjct 236 IGGPGIGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHLDGSTDRPSTGDSVLAGERSV 295 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GR+GTVV+HV+LGPVALAL KRGLP DTAL+TG EA + A+ID SLPPAD+VGAGR A+ Sbjct 296 GRVGTVVDHVDLGPVALALAKRGLPADTALMTGAEATIPALIDAQSLPPADEVGAGRLAL 355 Query 361 ERLRGGIR 368 +RLRG R Sbjct 356 DRLRGSAR 363 >gi|118466255|ref|YP_880025.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] gi|118167542|gb|ABK68439.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium 104] Length=364 Score = 564 bits (1454), Expect = 7e-159, Method: Compositional matrix adjust. Identities = 292/363 (81%), Positives = 317/363 (88%), Gaps = 5/363 (1%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 VPAPD GPDAGA+WHYGDPLGEQRA + +A+++DRSHR VLTL G DRQTWLHSISTQ+V Sbjct 5 VPAPDTGPDAGAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYV 64 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP 123 SDLPEGASTQNLSLDGQGRVEDHWIQTEL GTTYLDTEPWR PLL YLRKMVFWS VTP Sbjct 65 SDLPEGASTQNLSLDGQGRVEDHWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSDVTP 124 Query 124 RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVV 183 AAD+AVLSLLGP+LAE VLDALG+D LPAE AVP GG +RRMP G AG++ELD+V Sbjct 125 AAADLAVLSLLGPKLAERAVLDALGVDALPAEAAAVPTR-GGFLRRMPAGPAGRLELDLV 183 Query 184 VKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG 243 V R + ADW+ RL QAGVRP G+WAYEAHRVA ARRPRLGVDTDERTIPHEVGWIGG Sbjct 184 VPRAEAADWRNRLAQAGVRPGGVWAYEAHRVA----ARRPRLGVDTDERTIPHEVGWIGG 239 Query 244 PGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRL 303 PG GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD SV RP+TGD V AGGR VGRL Sbjct 240 PGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRL 299 Query 304 GTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERL 363 GTVV+HV+LGP+ALALLKRGLP DTAL TGP+A VAAVID DSLP A+ +GAGR AVERL Sbjct 300 GTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLPAAEQIGAGRLAVERL 359 Query 364 RGG 366 RGG Sbjct 360 RGG 362 >gi|254773691|ref|ZP_05215207.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium avium subsp. avium ATCC 25291] Length=364 Score = 562 bits (1448), Expect = 4e-158, Method: Compositional matrix adjust. Identities = 291/363 (81%), Positives = 316/363 (88%), Gaps = 5/363 (1%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 VPAPD GPDAGA+WHYGDPLGEQRA + +A+++DRSHR VLTL G DRQTWLHSISTQ+V Sbjct 5 VPAPDTGPDAGAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYV 64 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP 123 SDLPEGASTQNLSLDGQGRVEDHWIQTEL GTTYLDTEPWR PLL YLRKMVFWS VTP Sbjct 65 SDLPEGASTQNLSLDGQGRVEDHWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSDVTP 124 Query 124 RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVV 183 AAD+AVLSLLGP+LAE VLDALG+D LPAE AVP GG +RRMP G AG++ELD+V Sbjct 125 AAADLAVLSLLGPKLAERAVLDALGVDALPAEAAAVPTR-GGFLRRMPAGPAGRLELDLV 183 Query 184 VKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG 243 V R + ADW+ RL QAGV P G+WAYEAHRVA ARRPRLGVDTDERTIPHEVGWIGG Sbjct 184 VPRAEAADWRNRLAQAGVLPGGVWAYEAHRVA----ARRPRLGVDTDERTIPHEVGWIGG 239 Query 244 PGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRL 303 PG GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD SV RP+TGD V AGGR VGRL Sbjct 240 PGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVDRPATGDPVQAGGRAVGRL 299 Query 304 GTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERL 363 GTVV+HV+LGP+ALALLKRGLP DTAL TGP+A VAAVID DSLP A+ +GAGR AVERL Sbjct 300 GTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLPAAEQIGAGRLAVERL 359 Query 364 RGG 366 RGG Sbjct 360 RGG 362 >gi|296166432|ref|ZP_06848864.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898193|gb|EFG77767.1| folate-binding protein YgfZ [Mycobacterium parascrofulaceum ATCC BAA-614] Length=360 Score = 561 bits (1446), Expect = 6e-158, Method: Compositional matrix adjust. Identities = 293/366 (81%), Positives = 315/366 (87%), Gaps = 8/366 (2%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVPAPD GPDAGA+WHYGDPLGEQRA + AV+VDRSHRAVLTL G DRQ WLHSISTQH Sbjct 3 AVPAPDSGPDAGAVWHYGDPLGEQRAAETGAVVVDRSHRAVLTLTGSDRQKWLHSISTQH 62 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 VSDLPEGASTQNLSLDGQGRVEDHW+QTELG TTYLDTEPWRGEPLL YLRKMVFWS V Sbjct 63 VSDLPEGASTQNLSLDGQGRVEDHWVQTELGDTTYLDTEPWRGEPLLEYLRKMVFWSDVA 122 Query 123 PRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDV 182 P AADMAVLSLLGPRL++ VL+ALG+D LPAE A+PLAGGG RRMP AGQIELD+ Sbjct 123 PAAADMAVLSLLGPRLSDPAVLEALGVDALPAELTAMPLAGGGFARRMPGLPAGQIELDL 182 Query 183 VVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIG 242 VV RG+ A WQ RL +AG+RPAGIWAYEAHRVA A RPRLGVDTDERTIPHEVGWIG Sbjct 183 VVPRGESAGWQERLVRAGLRPAGIWAYEAHRVA----ALRPRLGVDTDERTIPHEVGWIG 238 Query 243 GPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGR 302 GAVHL+KGCYRGQETVARVHNLG+PPRMLVLLHLD SV RPSTGD VLA GR VGR Sbjct 239 ----GAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGSVDRPSTGDPVLADGRAVGR 294 Query 303 LGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVER 362 LGTVV+HV+LGPVALAL+KRG+P DT L TGP+ VAAVID DSLP A+ +GAGR AVER Sbjct 295 LGTVVDHVDLGPVALALVKRGVPADTELATGPQGSVAAVIDADSLPAAEQIGAGRLAVER 354 Query 363 LRGGIR 368 LRGG R Sbjct 355 LRGGAR 360 >gi|41406739|ref|NP_959575.1| hypothetical protein MAP0641c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395089|gb|AAS02958.1| hypothetical protein MAP_0641c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458326|gb|EGO37305.1| folate-binding protein YgfZ [Mycobacterium avium subsp. paratuberculosis S397] Length=364 Score = 561 bits (1445), Expect = 7e-158, Method: Compositional matrix adjust. Identities = 289/363 (80%), Positives = 316/363 (88%), Gaps = 5/363 (1%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 VPAPD GPDAGA+WHYGDPLGEQRA + +A+++DRSHR VLTL G DRQTWLHSISTQ+V Sbjct 5 VPAPDTGPDAGAVWHYGDPLGEQRAAETEALVIDRSHRGVLTLTGADRQTWLHSISTQYV 64 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP 123 SDLPEGASTQNLSLDGQGRVEDHWIQTEL GTTYLDTEPWR PLL YLRKMVFWS VTP Sbjct 65 SDLPEGASTQNLSLDGQGRVEDHWIQTELAGTTYLDTEPWRAGPLLDYLRKMVFWSDVTP 124 Query 124 RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVV 183 AAD+AVLSLLGP+LAE VLDALG+D LPAE AVP GG +RRMP G AG++ELD+V Sbjct 125 AAADLAVLSLLGPKLAERAVLDALGVDALPAEAAAVPTR-GGFLRRMPAGPAGRLELDLV 183 Query 184 VKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG 243 V R + ADW+ RL QAGVRP G+WAYEAHRVA +RRPRLG+DTDERTIPHEVGWIGG Sbjct 184 VPRAEAADWRNRLAQAGVRPGGVWAYEAHRVA----SRRPRLGMDTDERTIPHEVGWIGG 239 Query 244 PGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRL 303 PG GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD S RP+TGD V AGGR VGRL Sbjct 240 PGQGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSADRPATGDPVQAGGRAVGRL 299 Query 304 GTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERL 363 GTVV+HV+LGP+ALALLKRGLP DTAL TGP+A VAAVID DSLP A+ +GAGR AVERL Sbjct 300 GTVVDHVDLGPIALALLKRGLPADTALATGPQAAVAAVIDPDSLPAAEQIGAGRLAVERL 359 Query 364 RGG 366 RGG Sbjct 360 RGG 362 >gi|342860284|ref|ZP_08716935.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium colombiense CECT 3035] gi|342131939|gb|EGT85180.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium colombiense CECT 3035] Length=364 Score = 546 bits (1406), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 283/363 (78%), Positives = 306/363 (85%), Gaps = 5/363 (1%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 VPAP+ GPDAGA+WHYGDPLGEQRA +A+LVDRSHR VLTL G DRQTWLHSISTQ V Sbjct 5 VPAPETGPDAGAVWHYGDPLGEQRAAATEAILVDRSHRGVLTLTGNDRQTWLHSISTQFV 64 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP 123 SDLP+GASTQNLSLDGQGRVEDHWIQTEL GTTYLDTEPWR EPLL YLRKMVFWS VT Sbjct 65 SDLPDGASTQNLSLDGQGRVEDHWIQTELAGTTYLDTEPWRAEPLLQYLRKMVFWSEVTA 124 Query 124 RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVV 183 +AD+AVLSLLGP+LA++ VLDALG++ LPAE L AG G VRRMP G +ELD++ Sbjct 125 ASADLAVLSLLGPKLADQVVLDALGVEALPAE-LTATAAGDGFVRRMPSTPGGPVELDLL 183 Query 184 VKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGG 243 V R ADW+ RL QAGVRP G+WAYEAHRVA A RPRLGVDTDERTIPHEVGWIGG Sbjct 184 VPRTAAADWRHRLAQAGVRPGGVWAYEAHRVA----AVRPRLGVDTDERTIPHEVGWIGG 239 Query 244 PGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRL 303 P GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD SV RPSTGD V AGGRTVGRL Sbjct 240 PAEGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSVDRPSTGDPVQAGGRTVGRL 299 Query 304 GTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERL 363 GTV +HV+LGP+ALALLKRGLP DT L TG EA VAAVID DSLP + +GAGR AVERL Sbjct 300 GTVADHVDLGPIALALLKRGLPADTELGTGAEASVAAVIDADSLPATEQIGAGRLAVERL 359 Query 364 RGG 366 RGG Sbjct 360 RGG 362 >gi|15828181|ref|NP_302444.1| hypothetical protein ML2203 [Mycobacterium leprae TN] gi|13093735|emb|CAC31158.1| conserved hypothetical protein [Mycobacterium leprae] Length=373 Score = 540 bits (1392), Expect = 1e-151, Method: Compositional matrix adjust. Identities = 285/369 (78%), Positives = 308/369 (84%), Gaps = 8/369 (2%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 V AV APDPGPDAGAIWH+GDPLGEQR+ + DAVLVDRSHRA LTL G DRQTWLHSIST Sbjct 8 VNAVLAPDPGPDAGAIWHFGDPLGEQRSAETDAVLVDRSHRATLTLIGSDRQTWLHSIST 67 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS LP+GASTQNLSLD QGRVEDHWIQTELGGTTYLDTEPWRGEPLL YLRKMVFWS Sbjct 68 QHVSALPDGASTQNLSLDSQGRVEDHWIQTELGGTTYLDTEPWRGEPLLEYLRKMVFWSE 127 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTP +ADMA+LSLLGPRL E+ V +AL LD LP E AVPL G VRR+P AGQIEL Sbjct 128 VTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDESTAVPLTAGSFVRRIPGAPAGQIEL 187 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R + ADWQ RL GVR AG+WAYEAHRVA A RPRLGVDTD+RTIPHEVGW Sbjct 188 DLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVA----ALRPRLGVDTDQRTIPHEVGW 243 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARV NLG+PPRMLVLLHLD SV+R STGDAVLA V Sbjct 244 IGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAV 303 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTAL---VTGPE-AEVAAVIDVDSLPPADDVGAG 356 GRLGTVVEHV+LGPVALALLKRGLP DT L + GP+ VAAVID DSLP AD++G G Sbjct 304 GRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDGSVAAVIDPDSLPAADEIGVG 363 Query 357 RRAVERLRG 365 R A+ERLRG Sbjct 364 RLAIERLRG 372 >gi|221230658|ref|YP_002504074.1| hypothetical protein MLBr_02203 [Mycobacterium leprae Br4923] gi|699212|gb|AAA62976.1| u2266f [Mycobacterium leprae] gi|219933765|emb|CAR72300.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=366 Score = 539 bits (1389), Expect = 3e-151, Method: Compositional matrix adjust. Identities = 284/369 (77%), Positives = 308/369 (84%), Gaps = 8/369 (2%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 + AV APDPGPDAGAIWH+GDPLGEQR+ + DAVLVDRSHRA LTL G DRQTWLHSIST Sbjct 1 MNAVLAPDPGPDAGAIWHFGDPLGEQRSAETDAVLVDRSHRATLTLIGSDRQTWLHSIST 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS LP+GASTQNLSLD QGRVEDHWIQTELGGTTYLDTEPWRGEPLL YLRKMVFWS Sbjct 61 QHVSALPDGASTQNLSLDSQGRVEDHWIQTELGGTTYLDTEPWRGEPLLEYLRKMVFWSE 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VTP +ADMA+LSLLGPRL E+ V +AL LD LP E AVPL G VRR+P AGQIEL Sbjct 121 VTPGSADMAMLSLLGPRLTEQAVHNALYLDALPDESTAVPLTAGSFVRRIPGAPAGQIEL 180 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R + ADWQ RL GVR AG+WAYEAHRVA A RPRLGVDTD+RTIPHEVGW Sbjct 181 DLLVPRRESADWQSRLAGVGVRSAGMWAYEAHRVA----ALRPRLGVDTDQRTIPHEVGW 236 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARV NLG+PPRMLVLLHLD SV+R STGDAVLA V Sbjct 237 IGGPGEGAVHLDKGCYRGQETVARVQNLGKPPRMLVLLHLDGSVERTSTGDAVLANSGAV 296 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTAL---VTGPE-AEVAAVIDVDSLPPADDVGAG 356 GRLGTVVEHV+LGPVALALLKRGLP DT L + GP+ VAAVID DSLP AD++G G Sbjct 297 GRLGTVVEHVDLGPVALALLKRGLPTDTELTIELEGPQDGSVAAVIDPDSLPAADEIGVG 356 Query 357 RRAVERLRG 365 R A+ERLRG Sbjct 357 RLAIERLRG 365 >gi|118473812|ref|YP_890024.1| glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] gi|118175099|gb|ABK75995.1| Glycine cleavage T-protein (aminomethyl transferase) [Mycobacterium smegmatis str. MC2 155] Length=359 Score = 506 bits (1303), Expect = 3e-141, Method: Compositional matrix adjust. Identities = 265/366 (73%), Positives = 296/366 (81%), Gaps = 7/366 (1%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVP P+ PDAGA+WHYGDPLGEQR+ DAV++DRSHRAVL L G DRQ WLH+IS+ Sbjct 1 MSAVPTPEGSPDAGAVWHYGDPLGEQRSAATDAVVIDRSHRAVLALTGKDRQGWLHNISS 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS P+G T+NLSLD QGRVEDHW+QTEL GTTYLDTE WRGEPL AYLRKMVFWS Sbjct 61 QHVSAQPDGTVTENLSLDMQGRVEDHWVQTELDGTTYLDTESWRGEPLAAYLRKMVFWSD 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 V AD+ VLSLLGP LA + VL ALGL LP E A PL GGG VRR+P + +EL Sbjct 121 VQIEPADLGVLSLLGPALAGDAVLSALGLSALPEEATAQPLPGGGFVRRVP---SEGLEL 177 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DV+V R DW++RL AGVRPAG+WAYEAHRVA A+RPRLGVDTDERTIPHEVGW Sbjct 178 DVLVARETLDDWKQRLVSAGVRPAGMWAYEAHRVA----AQRPRLGVDTDERTIPHEVGW 233 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARVHNLGRPPRMLVLLHLD S RP+TGD VLAGGRTV Sbjct 234 IGGPGVGAVHLDKGCYRGQETVARVHNLGRPPRMLVLLHLDGSSDRPATGDPVLAGGRTV 293 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVV+HV+ GP+ALAL+KRGLP +T L+TG EV A ID DSLPP D VGAGR A+ Sbjct 294 GRLGTVVDHVDDGPIALALVKRGLPAETELMTGGSVEVPASIDPDSLPPPDSVGAGRLAI 353 Query 361 ERLRGG 366 ERLR G Sbjct 354 ERLRHG 359 >gi|120406057|ref|YP_955886.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] gi|119958875|gb|ABM15880.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium vanbaalenii PYR-1] Length=361 Score = 506 bits (1302), Expect = 3e-141, Method: Compositional matrix adjust. Identities = 265/366 (73%), Positives = 300/366 (82%), Gaps = 7/366 (1%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVPAPD GPDAGA+WHYGDPLGEQRA AV+VDRSHRAVL+L G +R +WLH+IS+ Sbjct 1 MSAVPAPDIGPDAGAVWHYGDPLGEQRAAAQGAVVVDRSHRAVLSLTGAERNSWLHTISS 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVSDL +G T+NLSLDGQGRVEDHW+QT+L G T LDTEPWRGEPLL++LRKMVFW+ Sbjct 61 QHVSDLADGTVTENLSLDGQGRVEDHWVQTQLDGRTVLDTEPWRGEPLLSFLRKMVFWAD 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 V AD+ VLSLLGP L + VLDA+GL LPA AV L GGG +RR+P +E+ Sbjct 121 VVVEPADLGVLSLLGPGLTDPAVLDAVGLPALPAPNSAVELPGGGFIRRLP---GPAVEV 177 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DVVV R + A W+ RL AGVRPAG+WAYEAHRVA ARRPRLGVDTDERTIPHEVGW Sbjct 178 DVVVPRDELAAWRDRLVAAGVRPAGVWAYEAHRVA----ARRPRLGVDTDERTIPHEVGW 233 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARVHNLG+PPRMLVLLHLD + RPSTGD +LAGGRTV Sbjct 234 IGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLLHLDGASDRPSTGDPLLAGGRTV 293 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVV+HV+ G +ALALLKRGLP DTAL TG E AA ID DS+PPAD VGAGR AV Sbjct 294 GRLGTVVDHVDEGVIALALLKRGLPADTALTTGGEVHAAATIDPDSMPPADGVGAGRLAV 353 Query 361 ERLRGG 366 +RLRGG Sbjct 354 DRLRGG 359 >gi|126437484|ref|YP_001073175.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] gi|126237284|gb|ABO00685.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. JLS] Length=356 Score = 491 bits (1263), Expect = 1e-136, Method: Compositional matrix adjust. Identities = 262/368 (72%), Positives = 295/368 (81%), Gaps = 12/368 (3%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVP P+ GPD GA+WHYGDPLGEQRA AV+VDRSHRA L L G +R++WLH+IS+ Sbjct 1 MSAVPVPE-GPDVGAVWHYGDPLGEQRAAADGAVVVDRSHRATLALSGAERRSWLHTISS 59 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QH+SD P+G TQNLSLDGQGRVEDHW QTEL G YLDTEPWRGEPLL YLR+MVFW+ Sbjct 60 QHISDQPDGTVTQNLSLDGQGRVEDHWWQTELDGVLYLDTEPWRGEPLLNYLRRMVFWAD 119 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VT AD+AVLSLLGP LA+ VLDALGL LPAE AV L GGG +RR+P A +EL Sbjct 120 VTIEPADLAVLSLLGPALADTPVLDALGLGSLPAESTAVALPGGGFIRRLP---ADGLEL 176 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R ADW+ RLT AGVRPAG+WAYEAHRVA A +PRLGVDTDERTIPHEVGW Sbjct 177 DLLVPRAQVADWRDRLTAAGVRPAGVWAYEAHRVA----ALQPRLGVDTDERTIPHEVGW 232 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IG AVHL+KGCYRGQETVARVHNLG+PPRMLV LHLD + RPSTGD VLAGGRTV Sbjct 233 IG----SAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGTTDRPSTGDPVLAGGRTV 288 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GR+GTVVEH++ GPVALAL+KRGLP DT L TG + E A+ID DSLP D VGAGR AV Sbjct 289 GRVGTVVEHIDDGPVALALVKRGLPADTPLTTGGDVEATAIIDADSLPDNDHVGAGRLAV 348 Query 361 ERLRGGIR 368 ERLRGG R Sbjct 349 ERLRGGGR 356 >gi|333992189|ref|YP_004524803.1| hypothetical protein JDM601_3549 [Mycobacterium sp. JDM601] gi|333488157|gb|AEF37549.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=359 Score = 488 bits (1256), Expect = 6e-136, Method: Compositional matrix adjust. Identities = 248/363 (69%), Positives = 294/363 (81%), Gaps = 8/363 (2%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVPAPD GPDAGAIWHYGDP GEQR Q +AVLVDRSHRA LT+ G +RQTWLH++ TQH Sbjct 3 AVPAPDSGPDAGAIWHYGDPFGEQRCAQTEAVLVDRSHRAALTVSGSERQTWLHTLCTQH 62 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V++L +GA+T+NL+LDG+GR+ +HW+QTELGG TYLDTEPW G+PL +LRKMVFW+ VT Sbjct 63 VAELADGATTENLTLDGKGRITNHWVQTELGGRTYLDTEPWLGDPLTEHLRKMVFWADVT 122 Query 123 PRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDV 182 + AD+AVLSLLGPRLA+ VLDALG+ P E G VRR P G+ L++ Sbjct 123 IQPADLAVLSLLGPRLADPAVLDALGVAAPPGEAAVAIGDADGFVRRGP----GEHALEL 178 Query 183 VVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIG 242 +V R ++ DWQRRL +AGV+PAGIWAYEA RVA ARRPRLG+DTDER+IPHE+ WIG Sbjct 179 LVPRAEKGDWQRRLARAGVKPAGIWAYEAERVA----ARRPRLGLDTDERSIPHELNWIG 234 Query 243 GPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGR 302 GPG GAVHL+KGCY GQETVARVHNLG+PPRMLVLLHLD SV RPSTGD + +GGR VGR Sbjct 235 GPGVGAVHLDKGCYSGQETVARVHNLGKPPRMLVLLHLDGSVDRPSTGDPISSGGRPVGR 294 Query 303 LGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVER 362 LGTVV+H ELGP+ALALLKRGL +T L TGP+ +V+AVID +S+PP D GAGR AV+R Sbjct 295 LGTVVDHFELGPIALALLKRGLSAETPLSTGPDGQVSAVIDAESMPPPDAPGAGRVAVDR 354 Query 363 LRG 365 LRG Sbjct 355 LRG 357 >gi|108801499|ref|YP_641696.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119870652|ref|YP_940604.1| glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] gi|108771918|gb|ABG10640.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium sp. MCS] gi|119696741|gb|ABL93814.1| Glycine cleavage T-protein, C-terminal barrel [Mycobacterium sp. KMS] Length=356 Score = 488 bits (1255), Expect = 8e-136, Method: Compositional matrix adjust. Identities = 261/368 (71%), Positives = 294/368 (80%), Gaps = 12/368 (3%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 ++AVP P+ GPD GA+WHYGDPLGEQRA AV+VDRSHRA L L G +R++WLH+IS+ Sbjct 1 MSAVPVPE-GPDVGAVWHYGDPLGEQRAAADGAVVVDRSHRATLALSGAERRSWLHTISS 59 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QH+SD +G TQNLSLDGQGRVEDHW QTEL G YLDTEPWRGEPLL YLR+MVFW+ Sbjct 60 QHISDQADGTVTQNLSLDGQGRVEDHWWQTELDGVLYLDTEPWRGEPLLNYLRRMVFWAD 119 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 VT AD+AVLSLLGP LA+ VLDALGL LPAE AV L GGG +RR+P A +EL Sbjct 120 VTIEPADLAVLSLLGPALADTPVLDALGLGSLPAESTAVALPGGGFIRRLP---ADGLEL 176 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R ADW+ RLT AGVRPAG+WAYEAHRVA A +PRLGVDTDERTIPHEVGW Sbjct 177 DLLVPRAQVADWRDRLTAAGVRPAGVWAYEAHRVA----ALQPRLGVDTDERTIPHEVGW 232 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IG AVHL+KGCYRGQETVARVHNLG+PPRMLV LHLD + RPSTGD VLAGGRTV Sbjct 233 IG----SAVHLDKGCYRGQETVARVHNLGKPPRMLVRLHLDGTTDRPSTGDPVLAGGRTV 288 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GR+GTVVEH++ GPVALAL+KRGLP DT L TG + E A+ID DSLP D VGAGR AV Sbjct 289 GRVGTVVEHIDDGPVALALVKRGLPADTPLTTGGDVEATAIIDADSLPDNDHVGAGRLAV 348 Query 361 ERLRGGIR 368 ERLRGG R Sbjct 349 ERLRGGGR 356 >gi|145222230|ref|YP_001132908.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315442670|ref|YP_004075549.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] gi|145214716|gb|ABP44120.1| glycine cleavage T protein (aminomethyl transferase) [Mycobacterium gilvum PYR-GCK] gi|315260973|gb|ADT97714.1| folate-binding protein YgfZ [Mycobacterium sp. Spyr1] Length=367 Score = 484 bits (1246), Expect = 9e-135, Method: Compositional matrix adjust. Identities = 257/368 (70%), Positives = 297/368 (81%), Gaps = 8/368 (2%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 A VP PD GPDAGA WHYGDPLGEQRA AV+VDRSHRAVLTL GG+R++WLH+IS+ Sbjct 5 TAKVPVPD-GPDAGAAWHYGDPLGEQRAAADGAVIVDRSHRAVLTLTGGERKSWLHTISS 63 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHVS+LP+GA T+NLSLDGQGR+EDHW+QTEL G T +DTEP RGE L ++LRKMVFWS Sbjct 64 QHVSELPDGAVTENLSLDGQGRIEDHWVQTELNGRTVIDTEPARGEALESFLRKMVFWSD 123 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 V ++D+AVLSLLGP +A+ VL ALGLD LP E AV LA GG VRR+P ++E+ Sbjct 124 VAIESSDLAVLSLLGPGVADPAVLTALGLDALPPEGTAVELADGGYVRRLP---GSEVEV 180 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D+VV R + W L AGVRPAG+WAYEAHRVA A+RPRLG+DTDERTIPHEVGW Sbjct 181 DLVVPRPEVTRWFDALVAAGVRPAGLWAYEAHRVA----AQRPRLGIDTDERTIPHEVGW 236 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTV 300 IGGPG GAVHL+KGCYRGQETVARVHNLG+PPRMLVL+HLD RPS GD +LAGGR V Sbjct 237 IGGPGVGAVHLDKGCYRGQETVARVHNLGKPPRMLVLVHLDGDGDRPSPGDPLLAGGRAV 296 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAV 360 GRLGTVV+HV+ G +ALAL+KRGLP DTAL TG E +VAA ID DS+PPAD VGAGR A+ Sbjct 297 GRLGTVVDHVDEGVIALALVKRGLPVDTALTTGGEVQVAAAIDPDSVPPADVVGAGRLAI 356 Query 361 ERLRGGIR 368 +RLR G R Sbjct 357 DRLRTGGR 364 >gi|325674774|ref|ZP_08154461.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707] gi|325554360|gb|EGD24035.1| folate-binding protein YgfZ [Rhodococcus equi ATCC 33707] Length=377 Score = 384 bits (985), Expect = 2e-104, Method: Compositional matrix adjust. Identities = 219/367 (60%), Positives = 260/367 (71%), Gaps = 13/367 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVP D PDAG WHYGDP EQRA A +VDRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVPPLDGSPDAGVAWHYGDPFAEQRAAVRAAAVVDRSHRFVIAISGEERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V+ LP+G S +NLSLD GRVE H++ T++ G T++DTE RG LL +L+KMVFWS Sbjct 78 VASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVTWIDTEAGRGADLLGFLQKMVFWSKAE 137 Query 123 PR-AADMAVLSLLGPRLAEERVLD-ALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 PR ++AVLSLLGP +A ALG+ LP + AVPLAGGG VRRMP Sbjct 138 PRDGNELAVLSLLGPDVAASPAFTAALGVAALPGVYEAVPLAGGGFVRRMP--WPTDDAF 195 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R D A W RL AG RPAG WA+EA RVA A RPR+G+DTD+RTIPHEVGW Sbjct 196 DLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVA----AHRPRIGLDTDDRTIPHEVGW 251 Query 241 IGGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGR 298 IGGP GAVHL KGCYRGQETVARVHNLG+PPR LV+LHLD S + RP G+ + A GR Sbjct 252 IGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLHLDGSAEGRPEVGETLTAAGR 311 Query 299 TVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRR 358 VGR+GTVV+H E GP+ALAL+KR +P DTAL GP AA ID DS+P D+V AGR Sbjct 312 AVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGP---CAAAIDADSVPQHDEVQAGRA 368 Query 359 AVERLRG 365 AV+RLRG Sbjct 369 AVDRLRG 375 >gi|226308307|ref|YP_002768267.1| hypothetical protein RER_48200 [Rhodococcus erythropolis PR4] gi|226187424|dbj|BAH35528.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=373 Score = 383 bits (983), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 214/366 (59%), Positives = 257/366 (71%), Gaps = 14/366 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV APD D G WHYGDPLGEQR Q AV+VDRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVTAPDGSADIGVAWHYGDPLGEQRTAQRAAVVVDRSHRFVIAIPGDERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 ++ LP+G S +NLSLD GRVE H++QT+L G T++DTE RG LL++L+KMVFWS Sbjct 78 IAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVTWIDTEADRGPDLLSFLKKMVFWSKAE 137 Query 123 PR-AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELD 181 PR ++AVLSL+GP VL A+G+ + A+ LA GG VRRMP + D Sbjct 138 PRDGNELAVLSLVGPE--SPAVLSAIGVQTPTDAYDALALADGGFVRRMP--WPTEDSFD 193 Query 182 VVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWI 241 ++V R A W +LT AG +PAG WA+EA RV ARRPRLG+DTDERTIPHEV WI Sbjct 194 LLVPREQLAAWWTKLTDAGAKPAGSWAFEALRVE----ARRPRLGLDTDERTIPHEVHWI 249 Query 242 GGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQR-PSTGDAVLAGGRT 299 GGP GAVHL+KGCYRGQETVARVHNLG+PPR LV+LHLD S + P GD + AGGR Sbjct 250 GGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHLDGSAEAVPEPGDPITAGGRA 309 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRA 359 VGR+GTVV H ELGP+ALAL+KR +P DT L+ GP AA ID DS+ D AGR A Sbjct 310 VGRVGTVVNHHELGPIALALIKRNIPVDTELMAGPS---AASIDPDSIVADDAPQAGREA 366 Query 360 VERLRG 365 V RLRG Sbjct 367 VNRLRG 372 >gi|312138308|ref|YP_004005644.1| glycine cleavage protein t [Rhodococcus equi 103S] gi|311887647|emb|CBH46959.1| glycine cleavage protein T [Rhodococcus equi 103S] Length=377 Score = 381 bits (979), Expect = 9e-104, Method: Compositional matrix adjust. Identities = 218/367 (60%), Positives = 259/367 (71%), Gaps = 13/367 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVP D PDAG WHYGDP EQRA A +VDRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVPPLDGSPDAGVAWHYGDPFAEQRAAVRAAAVVDRSHRFVIAISGEERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V+ LP+G S +NLSLD GRVE H++ T++ G T++DTE RG LL +L+KMVFWS Sbjct 78 VASLPDGTSAENLSLDLNGRVEHHFVMTDIDGVTWIDTEAGRGADLLGFLQKMVFWSKAE 137 Query 123 PR-AADMAVLSLLGPRLAEERVLD-ALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 PR ++AVLSLLGP +A ALG+ LP + A PLAGGG VRRMP Sbjct 138 PRDGNELAVLSLLGPDVAASPAFTAALGVAALPGVYEAEPLAGGGFVRRMP--WPTDDAF 195 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V R D A W RL AG RPAG WA+EA RVA A RPR+G+DTD+RTIPHEVGW Sbjct 196 DLLVPRADLAAWWSRLVDAGARPAGTWAFEALRVA----AHRPRIGLDTDDRTIPHEVGW 251 Query 241 IGGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGR 298 IGGP GAVHL KGCYRGQETVARVHNLG+PPR LV+LHLD S + RP G+ + A GR Sbjct 252 IGGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVMLHLDGSAEGRPEVGETLTAAGR 311 Query 299 TVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRR 358 VGR+GTVV+H E GP+ALAL+KR +P DTAL GP AA ID DS+P D+V AGR Sbjct 312 AVGRVGTVVDHFEDGPIALALVKRSVPVDTALDAGP---CAAAIDADSVPQHDEVQAGRA 368 Query 359 AVERLRG 365 AV+RLRG Sbjct 369 AVDRLRG 375 >gi|229489142|ref|ZP_04383008.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121] gi|229324646|gb|EEN90401.1| glycine cleavage T-protein [Rhodococcus erythropolis SK121] Length=373 Score = 380 bits (977), Expect = 2e-103, Method: Compositional matrix adjust. Identities = 213/366 (59%), Positives = 255/366 (70%), Gaps = 14/366 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV APD D G WHYGDPLGEQR Q AV+VDRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVTAPDGSADIGVAWHYGDPLGEQRTAQRAAVVVDRSHRFVIAIPGDERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 ++ LP+G S +NLSLD GRVE H++QT+L G T++DTE RG LL++L+KMVFWS Sbjct 78 IAALPDGKSAENLSLDVNGRVEHHFVQTDLAGVTWIDTEANRGPDLLSFLKKMVFWSKAE 137 Query 123 PR-AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELD 181 PR ++AVLSL+GP + VL AL + + A LA GG +RRMP + D Sbjct 138 PRDGNELAVLSLIGPEAST--VLAALEVQTPTEAYDAHALADGGFIRRMP--WPTENSFD 193 Query 182 VVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWI 241 ++V R A W RLT AG +PAG WA+EA RV A RPRLG+DTDERTIPHEV WI Sbjct 194 LLVPREQLAAWWTRLTDAGAKPAGSWAFEALRVE----ATRPRLGLDTDERTIPHEVHWI 249 Query 242 GGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQR-PSTGDAVLAGGRT 299 GGP GAVHL+KGCYRGQETVARVHNLG+PPR LV+LHLD S + P GD + AGGR Sbjct 250 GGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRHLVMLHLDGSAEAVPEPGDPITAGGRA 309 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRA 359 VGR+GTVV H ELGP+ALAL+KR +P DT L+ GP AA ID DS+ D AGR A Sbjct 310 VGRVGTVVNHHELGPIALALIKRNIPVDTELMAGPS---AASIDPDSIVADDAPQAGREA 366 Query 360 VERLRG 365 V RLRG Sbjct 367 VNRLRG 372 >gi|111021816|ref|YP_704788.1| hypothetical protein RHA1_ro04845 [Rhodococcus jostii RHA1] gi|110821346|gb|ABG96630.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=373 Score = 371 bits (953), Expect = 8e-101, Method: Compositional matrix adjust. Identities = 222/367 (61%), Positives = 266/367 (73%), Gaps = 16/367 (4%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVPAP+ PDAG WH+GDPLGEQR+ + AV++DRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVPAPEGSPDAGVAWHHGDPLGEQRSAERSAVVIDRSHRFVIAISGPERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V+ LP+GAS +NLSLD GRVE H++QT+L G T++DTE RG LL++L KMVFWS Sbjct 78 VAALPDGASAENLSLDVNGRVEHHFVQTDLDGVTWIDTEADRGPDLLSFLTKMVFWSKAE 137 Query 123 PRAAD-MAVLSLLGPRLAEERVLDALGLDVLPAE-WLAVPLAGGGIVRRMPDGLAGQIEL 180 PR + +AVLS++GP VLDA G+ V PAE + AV + GGG VRRMP Sbjct 138 PREGNELAVLSVIGPDAVT--VLDAAGV-VAPAEPYAAVAVPGGGFVRRMP--WPAAESF 192 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D+V+ R A W RLT AG PAG WA+EA RVA A RPR+G+DTD+RTIPHEV W Sbjct 193 DLVIPREGLATWWGRLTAAGAAPAGTWAFEALRVA----AARPRIGLDTDDRTIPHEVRW 248 Query 241 IGGPG-AGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGR 298 IGGP GAVHL KGCYRGQETVARVHNLG+PPR LVLLHLD S + RP GD V AGGR Sbjct 249 IGGPADHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHLDGSAEGRPEPGDPVTAGGR 308 Query 299 TVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRR 358 VGR+GTV++H ELGP+ALAL+KR +P DT LV G AA ID DS+P D V AGR Sbjct 309 AVGRIGTVIDHHELGPIALALVKRSIPTDTELVVG---SCAASIDPDSVPADDTVQAGRA 365 Query 359 AVERLRG 365 AV+RLRG Sbjct 366 AVDRLRG 372 >gi|54022550|ref|YP_116792.1| hypothetical protein nfa5830 [Nocardia farcinica IFM 10152] gi|54014058|dbj|BAD55428.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=371 Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 210/366 (58%), Positives = 253/366 (70%), Gaps = 14/366 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV P PDA WHYG+P GEQRA +VDRSHR VL + GG+R +WLH+IS+QH Sbjct 16 AVAGPPGSPDATVAWHYGNPFGEQRAAVERVAIVDRSHRFVLRITGGERLSWLHTISSQH 75 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V++L + S +NL LD GR++ H++ ++L GT ++DTE RG LL +L KMVFW+ Sbjct 76 VANLGDRRSAENLDLDLNGRIQHHFVLSDLDGTVWIDTEADRGPALLDFLTKMVFWADAK 135 Query 123 P-RAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELD 181 P A D AVLSLLGP +A R+ +ALG+ LP + PL GG +RRMP A D Sbjct 136 PAEATDHAVLSLLGPEVA--RLHEALGVTELPEIYAVTPLPDGGFLRRMPWPTADS--YD 191 Query 182 VVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWI 241 +VV R W LT+AG PAG+WA+EA RVA A RPR+G+DTDERTIPHEV WI Sbjct 192 LVVPRERLGAWWTTLTEAGAEPAGMWAFEALRVA----ALRPRIGLDTDERTIPHEVRWI 247 Query 242 GGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESV-QRPSTGDAVLAGGRT 299 GGP GAVHL+KGCYRGQETVARVHNLG+PPR LVLLHLD S +RP G V AGGRT Sbjct 248 GGPAEHGAVHLDKGCYRGQETVARVHNLGKPPRQLVLLHLDGSADERPQPGADVTAGGRT 307 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRA 359 VGRLG+VV+H ELGP+ALAL+KR +P D L TGP AA ID DS+P D AGR A Sbjct 308 VGRLGSVVDHYELGPIALALVKRAVPADAQLTTGPS---AAAIDPDSVPVDDTPQAGRLA 364 Query 360 VERLRG 365 V+RLRG Sbjct 365 VDRLRG 370 >gi|169627831|ref|YP_001701480.1| hypothetical protein MAB_0730c [Mycobacterium abscessus ATCC 19977] gi|169239798|emb|CAM60826.1| Conserved hypothetical protein (glycine cleavage T-protein aminomethyl transferase?) [Mycobacterium abscessus] Length=364 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 213/372 (58%), Positives = 257/372 (70%), Gaps = 20/372 (5%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 + AV P+ PDAGA+WHYGDPLGEQRA AVL+DRS RAVL L G +R +WLH++S+ Sbjct 1 MTAVYVPEGNPDAGAVWHYGDPLGEQRAALTHAVLIDRSTRAVLALSGPERLSWLHTVSS 60 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSM 120 QHV+DL G + +NLSLDGQGRVEDHW+QT+L G TYLDTE WRG+PL +L KMVFWS Sbjct 61 QHVADLRHGQTRENLSLDGQGRVEDHWVQTDLDGITYLDTESWRGQPLKDFLTKMVFWSK 120 Query 121 VTPRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 V AAD+ V +LLGP A + + LG+ LP AV L GG++RR+P LA + Sbjct 121 VEVAAADLKVFTLLGPDTAG--LAEKLGIAALPELDNAVALPDGGLIRRVPWPLA-EATY 177 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V G + + GVRPAG+WA+EA RVA A RPRL +DTDERTIPHEVGW Sbjct 178 DLLVPSG-----KGLAERLGVRPAGLWAFEALRVA----ATRPRLTLDTDERTIPHEVGW 228 Query 241 IG-GPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRT 299 I G AVHL KGCYRGQETVARVHNLG+PPR LVLLHLD S RP+ GD V A GR Sbjct 229 IAIGDDPRAVHLAKGCYRGQETVARVHNLGKPPRALVLLHLDGSADRPAPGDEVAAAGRA 288 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVA-----AVIDVDSLPPADDVG 354 VGR+G+VV+HV+LGP+ALAL+KR + AL G A + A +D+D LP Sbjct 289 VGRVGSVVDHVDLGPIALALVKRSVI--EALANGNPAPLTAGPSPAAVDLDLLPDLHAEQ 346 Query 355 AGRRAVERLRGG 366 GR AV RLR G Sbjct 347 RGRDAVNRLRQG 358 >gi|333918376|ref|YP_004491957.1| hypothetical protein AS9A_0704 [Amycolicicoccus subflavus DQS3-9A1] gi|333480598|gb|AEF39158.1| hypothetical protein AS9A_0704 [Amycolicicoccus subflavus DQS3-9A1] Length=384 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 206/366 (57%), Positives = 245/366 (67%), Gaps = 19/366 (5%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVPAP+ PD G WH GDPL EQR A V++DRSHR+V+++ G DR TWLHS+++Q Sbjct 34 AVPAPEEWPDQGVAWHCGDPLVEQREATAGLVVIDRSHRSVISVTGADRLTWLHSLTSQS 93 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 +DLP+GA+ ++L LD GR+E H++ T GT +LDTE LL+YL+KMVFWS V Sbjct 94 FTDLPDGATAESLILDINGRIEHHFVATHFDGTVWLDTEREYAAALLSYLQKMVFWSKVE 153 Query 123 PRAADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDV 182 R ADMAVL+L+GP LA+ +P AV L GG R P G + D Sbjct 154 VREADMAVLTLIGPALAK----------AIPDTTKAVALPDGGFTR--PLGWPAEGRADA 201 Query 183 VVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIG 242 VV R W TQAG RPAG WA EA RV + RPR+GVDTDERTIPHE WIG Sbjct 202 VVPRPQLTRWWAEYTQAGARPAGTWALEALRVT----SLRPRVGVDTDERTIPHEARWIG 257 Query 243 -GPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGRTV 300 GAVHL KGCYRGQETVARVHNLG+PPR LVLLHLD S + RP TGD V AGGRTV Sbjct 258 TAEQHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHLDGSDEHRPMTGDPVTAGGRTV 317 Query 301 GRLGTVVEHVELGPVALALLKRGLPGDTALVTG-PEAEVAAVIDVDSLPPADDVGAGRRA 359 GR+GTV++H E GPVALAL+KR + +T L G P EVAA ID DSLP ++V GR A Sbjct 318 GRVGTVIDHFEFGPVALALMKRTIKPETELTAGAPGREVAASIDPDSLPQYEEVQPGRAA 377 Query 360 VERLRG 365 V+RLRG Sbjct 378 VDRLRG 383 >gi|226364338|ref|YP_002782120.1| hypothetical protein ROP_49280 [Rhodococcus opacus B4] gi|226242827|dbj|BAH53175.1| hypothetical protein [Rhodococcus opacus B4] Length=373 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 223/366 (61%), Positives = 266/366 (73%), Gaps = 14/366 (3%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVPAP PDAG WH+GDPLGEQR+ + AV+VDRSHR V+ + G +R TWLH+IS+QH Sbjct 18 AVPAPAGSPDAGVAWHHGDPLGEQRSAERSAVVVDRSHRFVIAISGPERLTWLHTISSQH 77 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 V+ LP+GAS +NLSLD GRVE H++QT+L G T++DTE RG LL++L KMVFWS Sbjct 78 VAALPDGASAENLSLDVNGRVEHHFVQTDLDGVTWIDTEADRGPDLLSFLTKMVFWSKAE 137 Query 123 PR-AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELD 181 PR ++AVL+++GP VL A G+ V A + AV +AGGG VRRMP A D Sbjct 138 PRDGNELAVLNVIGPDAPS--VLGAAGVAVPAAPYAAVAVAGGGFVRRMPWPTADS--FD 193 Query 182 VVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWI 241 ++V R A W RLT AG PAG WA+EA RVA A RPR+G+DTD+RTIPHEV WI Sbjct 194 LLVPREGLATWWGRLTAAGAAPAGTWAFEALRVA----AVRPRIGLDTDDRTIPHEVRWI 249 Query 242 GGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGRT 299 GGP GAVHL KGCYRGQETVARVHNLG+PPR LVLLHLD S + RP GD V AGGR Sbjct 250 GGPAEHGAVHLEKGCYRGQETVARVHNLGKPPRHLVLLHLDGSAEGRPEPGDPVTAGGRA 309 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRA 359 VGR+GTV++H ELGP+ALAL+KR +P DT LVTGP AA ID DS+P D V AGR A Sbjct 310 VGRIGTVIDHHELGPIALALVKRSVPTDTELVTGP---CAASIDPDSVPVDDAVQAGRAA 366 Query 360 VERLRG 365 V+RLRG Sbjct 367 VDRLRG 372 >gi|326384540|ref|ZP_08206219.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395] gi|326196674|gb|EGD53869.1| folate-binding protein YgfZ [Gordonia neofelifaecis NRRL B-59395] Length=390 Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 207/379 (55%), Positives = 249/379 (66%), Gaps = 20/379 (5%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV P+ P G WHYGDPLGEQR+ A +VDRS RAV+ L G +R TWLH+IS+QH Sbjct 14 AVATPEGDPSPGVAWHYGDPLGEQRSATTRAAIVDRSDRAVIELSGPERLTWLHTISSQH 73 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 ++ L + S +NLSLDG GR+EDH++ T++ TT++DTE RG+ L +L KMVFW+ VT Sbjct 74 LTHLADRRSAENLSLDGNGRIEDHFVLTDIDETTWIDTEASRGQSLADFLTKMVFWAKVT 133 Query 123 PRA-ADMAVLSLLGPRLAEERVLDALGL--DVLPAEWLAVPLAGG-----GIVRRMPD-G 173 P A DMAVL+LLGP + + + L D +P + +P G R MP G Sbjct 134 PTARPDMAVLTLLGPDALTGPIAEIIALPSDAMPYQAGDLPELRHDDEPLGFWRVMPGIG 193 Query 174 LAGQIE-LDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDER 232 G +D+VV D +W R LT AG PAG+WAYEA RV A RPRL +DTDER Sbjct 194 EHGATPVVDLVVPEPDLREWWRLLTDAGAAPAGMWAYEALRVN----ALRPRLHLDTDER 249 Query 233 TIPHEVGWIGGPG-AGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLD-ESVQRPSTG 290 TIPHEV WIGGP GAVHL+KGCYRGQETVARV NLGRPPR LVLLHLD S RP TG Sbjct 250 TIPHEVDWIGGPDEGGAVHLDKGCYRGQETVARVANLGRPPRRLVLLHLDGSSAYRPITG 309 Query 291 DAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTG----PEAEVAAVIDVDS 346 AV AGGRTVGR+GTV++H E GP+ALAL+KR +P D LV G P+ A ID D Sbjct 310 VAVTAGGRTVGRVGTVIDHFENGPIALALVKRNVPVDAELVVGDADSPDTSATARIDADL 369 Query 347 LPPADDVGAGRRAVERLRG 365 D V GR AV+RLRG Sbjct 370 YTSDDQVPPGRAAVDRLRG 388 >gi|262200948|ref|YP_003272156.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] gi|262084295|gb|ACY20263.1| folate-binding protein YgfZ [Gordonia bronchialis DSM 43247] Length=389 Score = 339 bits (869), Expect = 5e-91, Method: Compositional matrix adjust. Identities = 204/376 (55%), Positives = 247/376 (66%), Gaps = 16/376 (4%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVP D WHYGDPLGEQRA A++VDRS RAV+ + G +R TWLH+IS+QH Sbjct 15 AVPESDGATAVSIAWHYGDPLGEQRAAACGAIIVDRSDRAVIEISGDERLTWLHTISSQH 74 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 +S+LP+ +S +NLSLD GRVE+H++ T++ G T++DTE RG L +L KMVFW+ Sbjct 75 ISNLPDRSSAENLSLDVNGRVEEHFVLTDVDGVTWVDTEGSRGAALHGFLAKMVFWAKAE 134 Query 123 PRA-ADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGG-------GIVRRMP--D 172 P DM V++L+GP ++ + L +D + A L G R MP Sbjct 135 PVLRPDMKVVTLVGPAARSGQIAELLEIDPDAPIYAAGDLPETHHEDEPLGFWRVMPPIG 194 Query 173 GLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDER 232 A +DVV+ W L AG R AG WA++A RVA A RPRLG DTD+R Sbjct 195 ENATLPVVDVVLPEYLLDRWWSALVDAGARMAGTWAFDALRVA----AVRPRLGADTDDR 250 Query 233 TIPHEVGWIGGPGA-GAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTG 290 TIPHEVGWIGGP GAVHL+KGCYRGQETVARVHNLG+ PR LVLLHLD S RP+TG Sbjct 251 TIPHEVGWIGGPAEFGAVHLDKGCYRGQETVARVHNLGKSPRRLVLLHLDGSADGRPATG 310 Query 291 DAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPA 350 D V+AGGRTVGRLGTVV+H ELG VALAL+KR +P DT LV G E V+A ID DS+ Sbjct 311 DPVVAGGRTVGRLGTVVDHFELGLVALALVKRNVPADTDLVVGTENPVSARIDPDSVRAD 370 Query 351 DDVGAGRRAVERLRGG 366 D V AGR AVERLR G Sbjct 371 DHVQAGRAAVERLRRG 386 >gi|343925902|ref|ZP_08765417.1| hypothetical protein GOALK_050_01970 [Gordonia alkanivorans NBRC 16433] gi|343764253|dbj|GAA12343.1| hypothetical protein GOALK_050_01970 [Gordonia alkanivorans NBRC 16433] Length=392 Score = 336 bits (861), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 206/380 (55%), Positives = 247/380 (65%), Gaps = 24/380 (6%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVP P + WH+GDPLGEQRA ++VDRS RAV+ + G +R +WLH+IS+QH Sbjct 15 AVPGPGEFHSSETPWHFGDPLGEQRAASTGVIVVDRSDRAVVEIPGDERLSWLHTISSQH 74 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 ++ LP+ S +NLSLD GRVE+H++ T++ G T++DTE RGE L +L KMVFW+ Sbjct 75 IAALPDRRSAENLSLDANGRVEEHFVLTDIDGVTWVDTEGVRGEALAGFLAKMVFWAKAQ 134 Query 123 PRA-ADMAVLSLLGPRLAEERVLDALGL----DVLPAEWLA------VPLAGGGIVRRMP 171 P DM VL+L+GP V + L + DV A L PL G RRMP Sbjct 135 PAPRTDMKVLTLVGPGAVTGPVAELLEIPADADVYQAGNLPETHHEDEPL---GFWRRMP 191 Query 172 DGLAGQIEL---DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVD 228 L +L DVV+ W L +AG R AG WAY+A RVA ARRPRLG D Sbjct 192 P-LGENRDLPVVDVVLPEFVLLRWWDALVEAGARMAGSWAYDALRVA----ARRPRLGAD 246 Query 229 TDERTIPHEVGWIGGPG-AGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLD-ESVQR 286 TDERTIPHEV WIGGP GAVHL+KGCYRGQETVARVHNLG+ PR LVLLHLD S QR Sbjct 247 TDERTIPHEVDWIGGPAEQGAVHLDKGCYRGQETVARVHNLGKSPRRLVLLHLDGSSDQR 306 Query 287 PSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDS 346 P+TGD V AGGRTVGRLGTV++H E GP+ALAL+KR + D L G E V+A ID DS Sbjct 307 PTTGDPVTAGGRTVGRLGTVIDHYEWGPIALALVKRNVGADVELTIGAEEPVSARIDPDS 366 Query 347 LPPADDVGAGRRAVERLRGG 366 + D V AGR AVERLR G Sbjct 367 IREDDHVQAGRAAVERLRSG 386 >gi|300790820|ref|YP_003771111.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] gi|299800334|gb|ADJ50709.1| glycine cleavage T protein [Amycolatopsis mediterranei U32] gi|340532513|gb|AEK47718.1| glycine cleavage T protein [Amycolatopsis mediterranei S699] Length=376 Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 190/377 (51%), Positives = 240/377 (64%), Gaps = 27/377 (7%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 ++P+PD P+AG WH+GDP EQR V++DRSHR L + G DR +WLH + +QH Sbjct 13 SIPSPDDHPEAGVPWHWGDPFAEQRTASRSVVVIDRSHREFLAVTGEDRLSWLHLVISQH 72 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPW--------RGEP--LLAYL 112 V+ L EG+ T+ L LD QGRVE H + L GT YLDT+P +G P L YL Sbjct 73 VTGLAEGSGTEALVLDSQGRVETHMVLAHLDGTVYLDTDPGPSVTSALPKGGPQTLREYL 132 Query 113 RKMVFWSMVTPRAA--DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRM 170 M FWS V R A ++A+L++LGP ERVL A+G +V P + L GGG RRM Sbjct 133 EAMKFWSKVDIRDATGELALLTVLGPD--AERVLSAVGAEVGPEPYAVAALPGGGFARRM 190 Query 171 PDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTD 230 P G+ +D+ V R DW +RLT AG R AG W ++A RV + RPRLGVDTD Sbjct 191 P--WPGRSSVDLAVPREALVDWWKRLTDAGARAAGSWVFDALRVE----SLRPRLGVDTD 244 Query 231 ERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPST 289 +RTIPHEVGW+G A H+ KGCYRGQETV++VHN+GRPPR L+LLHLD S + P Sbjct 245 DRTIPHEVGWVG----SAAHVAKGCYRGQETVSKVHNVGRPPRNLLLLHLDGSPEVTPEP 300 Query 290 GDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAE-VAAVIDVDSLP 348 GD VL GRTVGR+GTV++H ELGP+ALAL+KR P L+ G E V A ID DS+ Sbjct 301 GDPVLLDGRTVGRIGTVIQHHELGPIALALVKRSTPVGAELLAGSEDNLVQAAIDPDSV- 359 Query 349 PADDVGAGRRAVERLRG 365 P++ GR A +LRG Sbjct 360 PSEQPAPGRAAAAQLRG 376 >gi|257057714|ref|YP_003135546.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] gi|256587586|gb|ACU98719.1| folate-binding protein YgfZ [Saccharomonospora viridis DSM 43017] Length=376 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 186/377 (50%), Positives = 233/377 (62%), Gaps = 29/377 (7%) Query 4 VPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHV 63 V P+ P+AG WH+GDP EQR +VDRSHR ++T+ G DR +WLH + +QHV Sbjct 14 VAPPEDHPEAGVPWHWGDPFAEQRTASRGVAVVDRSHREIITVTGEDRLSWLHLVISQHV 73 Query 64 SDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEP-----------WRGEPLLAYL 112 ++LPEG T+ L LD GR++ H + + GT YLDT+P +PLL Y Sbjct 74 TELPEGEGTEALVLDSHGRIDAHMVLAYVDGTVYLDTDPGAQATTALPKGGEKQPLLDYF 133 Query 113 RKMVFWSMVTPRAA--DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRM 170 M FWS V R A + A+L+LLGP ++ + LD P AV GGI RRM Sbjct 134 EAMKFWSKVDIRDATDEWALLTLLGPEVSTMLSRFDIELDTRP---YAVTRFSGGIARRM 190 Query 171 PDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTD 230 P G +D+++ R + DW +LT AG RPAG WA++A RV + RP+LGVDTD Sbjct 191 P--WPGPSSVDLLIPRSELVDWWTKLTDAGARPAGTWAFDALRVE----SLRPKLGVDTD 244 Query 231 ERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPST 289 ERTIPHEV WIG A H+ KGCYRGQETVA+VHN+G+PPR +VLLHLD S + P T Sbjct 245 ERTIPHEVNWIG----SAAHVAKGCYRGQETVAKVHNVGKPPRNMVLLHLDGSQEIYPET 300 Query 290 GDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVA-AVIDVDSLP 348 GD VL G RTVGR+G+V +H ELGP+ALALLKR P D L+ G E V A ID DSL Sbjct 301 GDPVLRGDRTVGRVGSVAQHHELGPIALALLKRSTPADAELLAGTEDRVVQASIDPDSL- 359 Query 349 PADDVGAGRRAVERLRG 365 P + GR A RLRG Sbjct 360 PREHTAPGREAARRLRG 376 >gi|134103536|ref|YP_001109197.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] gi|291008361|ref|ZP_06566334.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] gi|133916159|emb|CAM06272.1| glycine cleavage T protein (aminomethyl transferase) [Saccharopolyspora erythraea NRRL 2338] Length=376 Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 185/390 (48%), Positives = 236/390 (61%), Gaps = 48/390 (12%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AVP PD DAG WH+GDP EQR+ AV+VDRSHR V+ + G +R +WLH + +QH Sbjct 7 AVPPPDDSADAGVPWHFGDPFAEQRSATRSAVVVDRSHRQVIAVPGEERLSWLHLVLSQH 66 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRG-------------EPLL 109 +++LP+G +T+ L LD G V+ H + G YLDTEP + LL Sbjct 67 MTELPDGRATEALVLDSHGHVDCHVMVAHHDGVVYLDTEPGAQATSALPSLGVDGRQSLL 126 Query 110 AYLRKMVFWSMVTPRAA--DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVP------- 160 YL M FWS V PR A + A+LS++GP A+ L +++ VP Sbjct 127 EYLEAMRFWSKVEPRDASEEFALLSVIGPDAAQ-----------LLSKFATVPSGGDEVA 175 Query 161 -LAGGGIVRRMPDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVP 219 L GGG VR +P G D+VV R D +W +LT AG+RPAG AY+A RV Sbjct 176 GLPGGGFVRTVP--FRGLFTADLVVPRADLVEWWTKLTDAGMRPAGTMAYDALRVE---- 229 Query 220 ARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLH 279 A RPR+G +TD+R IPHE+GW+ A H+ KGCYRGQETV++VHN+G+PPR +VLLH Sbjct 230 ALRPRVGFETDDRAIPHELGWV----HVAAHVAKGCYRGQETVSKVHNVGKPPRRMVLLH 285 Query 280 LDESVQ-RPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTG-PEAE 337 LD SV+ RP TGD V G R VGR+GTVV H ELGP+ALALLKR P D LV G PE + Sbjct 286 LDGSVEIRPETGDPVWHGERKVGRVGTVVLHHELGPIALALLKRTAPVDAELVAGDPEQD 345 Query 338 --VAAVIDVDSLPPADDVGAGRRAVERLRG 365 VAA +D DS+PP GR A + L+G Sbjct 346 RAVAAAVDPDSVPPDTGEPPGRIAAQGLKG 375 >gi|302531017|ref|ZP_07283359.1| glycine cleavage T protein [Streptomyces sp. AA4] gi|302439912|gb|EFL11728.1| glycine cleavage T protein [Streptomyces sp. AA4] Length=373 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 181/377 (49%), Positives = 229/377 (61%), Gaps = 30/377 (7%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV AP+ P+AG WH+GDP EQR V++DRSHR +L + G +R +WLH + +QH Sbjct 13 AVAAPEGHPEAGVPWHWGDPFAEQRTAARGVVVIDRSHREILAVTGEERLSWLHLVISQH 72 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPW--------RG--EPLLAYL 112 V++L T+ L LD QG V+ H++ G T YLD++P +G + L YL Sbjct 73 VTELAGNTGTEALVLDSQGHVDTHFVLAHAGETVYLDSDPGPLVTSALPKGGKQTLREYL 132 Query 113 RKMVFWSMVTPRAA--DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRM 170 M FWS V R A ++AVLS+LGP LG+++ + L GG RRM Sbjct 133 EAMKFWSKVEIRDATEELAVLSVLGPETD-----SVLGVELGTEPYSVAALPEGGFARRM 187 Query 171 PDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTD 230 P + D+VV R W +RLT AG RPAG W ++A RV +R PRLGVDTD Sbjct 188 P--WPTRAGADLVVPRAQLTQWWQRLTDAGARPAGSWTFDALRVE----SRHPRLGVDTD 241 Query 231 ERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPST 289 ERTIPHEVGWIG A H+ KGCYRGQETV++VHN+GRPPR L LLHLD S + P T Sbjct 242 ERTIPHEVGWIG----SAAHVAKGCYRGQETVSKVHNVGRPPRYLALLHLDGSPEITPET 297 Query 290 GDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVA-AVIDVDSLP 348 GD V G R VGR+GTV +H ELGP+ALAL+KR +PG L+ G E V A +D DS+ Sbjct 298 GDPVKLGERVVGRIGTVAQHHELGPIALALVKRSVPGGAELLAGDEDRVVQATVDPDSV- 356 Query 349 PADDVGAGRRAVERLRG 365 PA GR A +RLRG Sbjct 357 PAVHAAPGREAAQRLRG 373 >gi|256380819|ref|YP_003104479.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] gi|255925122|gb|ACU40633.1| folate-binding protein YgfZ [Actinosynnema mirum DSM 43827] Length=364 Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust. Identities = 177/350 (51%), Positives = 220/350 (63%), Gaps = 16/350 (4%) Query 3 AVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 AV D PD G WH+GDP EQRA + DRSHR V+ + G DR TWLHS+++QH Sbjct 11 AVAPFDGAPDQGVPWHFGDPFAEQRAAARGVAVFDRSHRGVIAVPGEDRLTWLHSLTSQH 70 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 + L + T+ L LD QGRVE H + GGT YLD E PLL YL +MVFWS V Sbjct 71 FTALGQDRGTEMLVLDAQGRVEHHAVVANTGGTAYLDVEAETTAPLLEYLSRMVFWSKVE 130 Query 123 PR--AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 PR A++A+L++ GP AE +L L + V L GGG RR+ AG + Sbjct 131 PRDATAELALLTVAGPDAAE--LLGKLDVPVPDGADGVRELPGGGFARRVSWPGAGAV-- 186 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 D++V RG+ DW RLT AG R AG WA+ A RV + RPR GVDTDE+TIPHEV W Sbjct 187 DLLVPRGELGDWWSRLTGAGARAAGSWAF----TALRVESLRPRPGVDTDEKTIPHEVNW 242 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTGDAVLAGGRT 299 IG AVHL+KGCYRGQETVA+V N+GRPPR ++LLHLD + + +P TGD V G R Sbjct 243 IG----SAVHLDKGCYRGQETVAKVQNVGRPPRRMLLLHLDGTREVQPETGDPVRHGDRV 298 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVA-AVIDVDSLP 348 VGR+G+V H +LGPV LAL+KR +P D L+ G E V A +D DS+P Sbjct 299 VGRVGSVALHHDLGPVVLALVKRSVPVDAELLVGAEDRVVQASVDPDSVP 348 >gi|296141246|ref|YP_003648489.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] gi|296029380|gb|ADG80150.1| folate-binding protein YgfZ [Tsukamurella paurometabola DSM 20162] Length=349 Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 189/377 (51%), Positives = 232/377 (62%), Gaps = 48/377 (12%) Query 1 VAAVPAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSIST 60 V+ + P+ DAG WHYGDP GEQRA + A +VDRS+R V+TL G DR +WLHSI++ Sbjct 8 VSGIANPEDAVDAGVTWHYGDPFGEQRAAERGAAVVDRSNRRVITLTGPDRLSWLHSITS 67 Query 61 QHVSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEP--------LLAYL 112 QH++ LP+G S QNL+LDG GRV DH+ T+ GT YLDTEP P L YL Sbjct 68 QHLTALPDGGSVQNLNLDGSGRVLDHFWVTDSDGTAYLDTEPATLAPKEAPLSPDLGTYL 127 Query 113 RKMVFWSMVTPRA-ADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMP 171 ++MVF + V +A D+AVL++ GP A V A G+ R P Sbjct 128 QRMVFRADVQVQARDDLAVLTVFGPDAA------------------TVAEAVPGVRRSEP 169 Query 172 DGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDE 231 D E++++++R D L AG RP G WAYEA RVA A R G+DTD+ Sbjct 170 D------EVNLIIERAAVPDAITTLVAAGARPVGTWAYEARRVA----AAHARAGLDTDD 219 Query 232 RTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQ-RPSTG 290 +TIPHEV WIG AVHL+KGCYRGQET+ARVHN+GRPPR LVLLHLD S P+TG Sbjct 220 KTIPHEVNWIG----TAVHLDKGCYRGQETIARVHNIGRPPRRLVLLHLDGSADATPATG 275 Query 291 DAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPA 350 D V GRTVGRLGTVVEH + GP+ALAL+KR +P D L EA AA + PA Sbjct 276 DPVTVDGRTVGRLGTVVEHADYGPIALALIKRTIPDDAKL----EAGGAAAAIDADVTPA 331 Query 351 DDVG--AGRRAVERLRG 365 D AGR AV+RLRG Sbjct 332 ADTAEQAGRSAVDRLRG 348 >gi|331694330|ref|YP_004330569.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] gi|326949019|gb|AEA22716.1| folate-binding protein YgfZ [Pseudonocardia dioxanivorans CB1190] Length=362 Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust. Identities = 200/354 (57%), Positives = 225/354 (64%), Gaps = 19/354 (5%) Query 4 VPAPDP-GPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQH 62 VPA P PDA H GDPL EQRA A +VDRSHR VL + G DR +WLH + TQH Sbjct 8 VPADAPHDPDARVPAHRGDPLAEQRAMARGAAVVDRSHRGVLAVPGEDRLSWLHLLLTQH 67 Query 63 VSDLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVT 122 VS+LP T+ L LD GRV H + +G T +LD EP LL YL KMVFWS V Sbjct 68 VSELPGDTGTEALVLDINGRVLHHMVVAHVGDTVWLDVEPDDAAELLGYLTKMVFWSKVE 127 Query 123 PRAA--DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIEL 180 PR A ++AVLS++GP VL A G+ V P A+ LAGGG VRRMP G+ Sbjct 128 PRDATDELAVLSVVGPDTPT--VLAAAGVPV-PDGVGALALAGGGFVRRMP--WPGKDAA 182 Query 181 DVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGW 240 DVVV R +R W RLT AG R AG A+EA RV A RPRL VDTDERTIPHEVGW Sbjct 183 DVVVPRAERDAWFARLTAAGARAAGTMAFEALRVE----ALRPRLRVDTDERTIPHEVGW 238 Query 241 IGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQR-PSTGDAVLAGGRT 299 IG AVHL KGCYRGQETVARV NLGRPPR LVLLHLD + P GD V+ GGR Sbjct 239 IG----SAVHLTKGCYRGQETVARVANLGRPPRRLVLLHLDAGDEELPRPGDPVVNGGRP 294 Query 300 VGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVA-AVIDVDSLPPADD 352 VGR+GTV H ELG VALAL+KR +P D LV G + A A ID DS+ ADD Sbjct 295 VGRVGTVTLHHELGAVALALVKRSVPVDAELVAGVDERAAPARIDPDSI-EADD 347 >gi|258655141|ref|YP_003204297.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] gi|258558366|gb|ACV81308.1| folate-binding protein YgfZ [Nakamurella multipartita DSM 44233] Length=369 Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust. Identities = 169/338 (50%), Positives = 211/338 (63%), Gaps = 26/338 (7%) Query 10 GPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEG 69 G D G WHYGDP EQRA ++ A L+D ++R VL + G DR TWLH++S+QH++DL +G Sbjct 30 GADEGVAWHYGDPTAEQRAAESGAALIDHTNRDVLAVTGEDRLTWLHTLSSQHLTDLADG 89 Query 70 ASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPRAADMA 129 AST+ L L G VE H + T G YLDTEP G LLA+L M FWS V AD+A Sbjct 90 ASTEALFLSPNGHVEHHAVLTHQDGVVYLDTEPGAGAALLAFLDGMRFWSKVEVAPADLA 149 Query 130 VLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVVVKRGDR 189 VL+L GP A D G + P GG RR +G LD+V+ R Sbjct 150 VLALAGPTAA-----DVAGRARNAEPGRSGP--DGGFTRRSAEG------LDLVLPRAAV 196 Query 190 ADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAV 249 + L AG PAG WA + A R+P RRPR GVDTDE+TIP+EV W+ + AV Sbjct 197 GAVAQELRAAGAVPAGSWAAD----ALRIPTRRPRWGVDTDEKTIPNEVSWL----STAV 248 Query 250 HLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESV-QRPSTGDAVLAG-GRTVGRLGTVV 307 HL+KGCYRGQETVARVHNLGRPPR LV+L+LD SV P G+ V +G GR VGRLGT+ Sbjct 249 HLHKGCYRGQETVARVHNLGRPPRRLVMLNLDGSVGTLPEPGEPVTSGAGRAVGRLGTIA 308 Query 308 EHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVD 345 +H ELGP+ALAL+KR + T L+ G + AV+D+D Sbjct 309 QHHELGPIALALIKRSVEAGTPLLVG---GIDAVVDID 343 >gi|325001986|ref|ZP_08123098.1| folate-binding protein YgfZ [Pseudonocardia sp. P1] Length=373 Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 192/363 (53%), Positives = 221/363 (61%), Gaps = 17/363 (4%) Query 11 PDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGA 70 PDA H+GDP EQRA A +VDRSHR V+ + G +R +WLH + TQHVS+LP Sbjct 19 PDAAVPAHHGDPPAEQRAMARAAAVVDRSHREVIAVSGEERLSWLHLLLTQHVSELPPDT 78 Query 71 STQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR--AADM 128 T+ L LD QGRV H G T YLDTEP G PLL YL KMVFWS V PR + Sbjct 79 GTEALVLDVQGRVLHHMAVAATGDTVYLDTEPGEGAPLLDYLTKMVFWSKVEPRDVTGEF 138 Query 129 AVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVVVKRGD 188 AVL ++GP + + VL+ GL + PA L GGG VRR P G+ +DVVV R Sbjct 139 AVLGVVGPDVPD--VLEKAGLPLPPAPHGVAALPGGGFVRRTP--WPGRDAVDVVVPRDA 194 Query 189 RADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGGPGAGA 248 W LT AG R AG A+EA RV +R PRL DTD+RTIPHEVGWIG A Sbjct 195 TGTWWSALTAAGARAAGTIAFEALRVE----SRAPRLHRDTDDRTIPHEVGWIG----PA 246 Query 249 VHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQR-PSTGDAVLAGGRTVGRLGTVV 307 VHL KGCYRGQETVARV NLGRPPR VLL LD + P TGD V RTVGR+GTVV Sbjct 247 VHLTKGCYRGQETVARVANLGRPPRRQVLLLLDAGDEELPRTGDPVRRDDRTVGRVGTVV 306 Query 308 EHVELGPVALALLKRGLPGDTALVTGPEAEVA-AVIDVDSLPP-ADDVGAGRRAVERLRG 365 +H ELGPVALAL+KR +P D L G + V+ A ID DS D+ GR A ER G Sbjct 307 QHHELGPVALALVKRSVPVDAELTAGVDDRVSPATIDPDSYEQDPDNPPPGRAARERTAG 366 Query 366 GIR 368 R Sbjct 367 AAR 369 >gi|158317892|ref|YP_001510400.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EAN1pec] gi|158113297|gb|ABW15494.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. EAN1pec] Length=409 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 177/392 (46%), Positives = 217/392 (56%), Gaps = 60/392 (15%) Query 9 PGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPE 68 P PDA HYGDPL EQR AVLVDRS+R VL + G +R TWLHS+++QH+S L Sbjct 27 PEPDATVAAHYGDPLREQRRAVTTAVLVDRSNRGVLRVTGPERLTWLHSLTSQHLSQLAP 86 Query 69 GASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTP--RAA 126 G T+ L L G +E H + + G T++D EP LL++L M F V P A Sbjct 87 GRGTEALVLSPHGHIEHHLVLADDGTATWIDVEPGSAPRLLSFLESMRFMLRVEPGDATA 146 Query 127 DMAVLSLLGPRLAEERVLDALGLDVLPAEWLAV----------PLAGGGI---------- 166 + AVLSLLGP A + G +P E P A G + Sbjct 147 ETAVLSLLGPG-AADVARAVFGPSAVPGEAGGGPAAGTAAAGSPTAAGAVTTGPYPVTRA 205 Query 167 -------------------VRRMPDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIW 207 +RRMP GL D++V R D A +L AG PAG+ Sbjct 206 AATTDPTATGAAVGGPAPLIRRMPYGL------DLLVARADLATIADQLVGAGATPAGLS 259 Query 208 AYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHN 267 A+EA R+A ARRPRLG +TD RTIPHEVGW+ AVHL+KGCYRGQETVARVHN Sbjct 260 AFEALRIA----ARRPRLGRETDHRTIPHEVGWL----PAAVHLDKGCYRGQETVARVHN 311 Query 268 LGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGD 327 LGRPPR +VLLHLD +V P G V +GGR VG +G H ELGP+ALA++KR LP D Sbjct 312 LGRPPRRMVLLHLDGAVAAP--GTPVTSGGRAVGFVGASEMHHELGPIALAVVKRSLPAD 369 Query 328 TAL-VTGPE-AEVAAVIDVDSLPPADDVGAGR 357 L VT P+ A+VAA ID ++ P AGR Sbjct 370 AVLVVTDPDGAQVAATIDPEAGPEQPTRPAGR 401 >gi|312200122|ref|YP_004020183.1| folate-binding protein YgfZ [Frankia sp. EuI1c] gi|311231458|gb|ADP84313.1| folate-binding protein YgfZ [Frankia sp. EuI1c] Length=393 Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust. Identities = 181/376 (49%), Positives = 216/376 (58%), Gaps = 46/376 (12%) Query 10 GPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEG 69 G DAG HYGDPL EQR AVLVDRSHR V+ + G DR TWLHS+++QH+S L Sbjct 31 GVDAGVAAHYGDPLREQRLASTGAVLVDRSHRGVVRVTGPDRLTWLHSLTSQHLSALRPL 90 Query 70 ASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEP-----LLAYLRKMVFWSMVTPR 124 T+ L L G VE H + + G T +D EP L +L M F V P Sbjct 91 RGTEALLLSPHGHVEHHLVLADDGQATLIDVEPAGDASSGAVALTRFLESMRFLLRVEPA 150 Query 125 --AADMAVLSLLGPRLAEERVLDALGLDV--LPAEWLA---------------VPLAGGG 165 A AVLSL+GP+ A V ALG D +PA+W A P+A G Sbjct 151 DVTAATAVLSLVGPQ-AAATVAQALGADAADVPADWAAPTGDGAAGLPAEAGRYPVARFG 209 Query 166 ---IVRRMPDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARR 222 + RRMP G +D++++R A RL AG AG+ A+EA R+A A+R Sbjct 210 PDVLARRMPYG------VDLLIERSGLASVAERLRAAGATVAGLDAFEAIRIA----AQR 259 Query 223 PRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDE 282 PRLG DTD RTIPHEVGW+ GAVHL+KGCYRGQETVARVHNLGRPPR LVLLHLD Sbjct 260 PRLGADTDHRTIPHEVGWL----TGAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDG 315 Query 283 SVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTG-PEA-EVAA 340 +V P G V GR VG +G+ H ELGPVALA++KR +P D LV P+ EVAA Sbjct 316 AVAAP--GSPVTTAGRQVGFVGSSRMHAELGPVALAMVKRSIPDDAPLVVNDPDGHEVAA 373 Query 341 VIDVDSLPPADDVGAG 356 ID DS P D AG Sbjct 374 QIDPDSGPVRPDRPAG 389 >gi|288920191|ref|ZP_06414507.1| folate-binding protein YgfZ [Frankia sp. EUN1f] gi|288348441|gb|EFC82702.1| folate-binding protein YgfZ [Frankia sp. EUN1f] Length=415 Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 175/398 (44%), Positives = 214/398 (54%), Gaps = 66/398 (16%) Query 9 PGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPE 68 P PD HYGDPL EQR A LVDRS+R V+ + G DR TWLHS+++QH+S L Sbjct 27 PEPDTAVAAHYGDPLREQRLAATGAALVDRSNREVVRITGADRLTWLHSVTSQHLSQLAP 86 Query 69 GASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR--AA 126 T+ L L G VE H + + G T++D EP LLA+L+ M F V P A Sbjct 87 MHGTEALVLSPHGHVEHHLVLADDGIATWIDVEPTTAPRLLAFLQSMRFLMRVEPVDVTA 146 Query 127 DMAVLSLLGPRLAEERVLDALGLDVLPAEWLA---------VPLAGGGIV---------- 167 ++AVLSL GPR A+E G LPA VP G+V Sbjct 147 EVAVLSLTGPR-ADEVAAAVFGPAALPAPLAGTGTGGATGAVPRTSAGVVTSGPYPVSHA 205 Query 168 --------------------------RRMPDGLAGQIELDVVVKRGDRADWQRRLTQAGV 201 RRMP GL D++V R D A RLT AG Sbjct 206 APAGTQAAPDEQSAPDAPAGGRLPLIRRMPHGL------DLLVARSDLAATADRLTSAGA 259 Query 202 RPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIGGPGAGAVHLNKGCYRGQET 261 G+ A+EA R+A +R+PRL +TD RTIPHEVGW+ A AVHL+KGCYRGQET Sbjct 260 ALIGLSAFEAQRIA----SRQPRLNRETDHRTIPHEVGWL----ASAVHLDKGCYRGQET 311 Query 262 VARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGPVALALLK 321 VARVHNLGRPPR LVLLHLD +V + G V A GRTVG +G+ H ELGP+ALA++K Sbjct 312 VARVHNLGRPPRRLVLLHLDGTVA--AQGCPVTAAGRTVGFVGSSEMHHELGPIALAVVK 369 Query 322 RGLPGDTALVTGPE--AEVAAVIDVDSLPPADDVGAGR 357 R + D LV + A+VAA ID D+ P AGR Sbjct 370 RSVALDVPLVVTDQDGAQVAAAIDPDAEPEQPSRPAGR 407 >gi|145592879|ref|YP_001157176.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] gi|145302216|gb|ABP52798.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora tropica CNB-440] Length=369 Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 170/346 (50%), Positives = 209/346 (61%), Gaps = 33/346 (9%) Query 18 HYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSL 77 HYGDPL EQR + LVDRSHR V+ + G DR WLH+++TQH++DLP+G T+ L L Sbjct 36 HYGDPLREQRTLETGVGLVDRSHRGVIAVPGEDRLGWLHTLTTQHLADLPDGQGTELLVL 95 Query 78 DGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR--AADMAVLSLLG 135 G VE H + E GGTT+LDTEP LL YL +M F+S V PR D A+LSL+G Sbjct 96 SPHGHVEQHAMVAEEGGTTWLDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLSLVG 155 Query 136 PRLAEERVLDALGL-DVLPAEWLAVP---LAGGGI---------VRRMPDG---LAGQIE 179 P A + LG+ D+ + L VP G + VR +P G G + Sbjct 156 P--AAVDAVATLGVSDLAEPDLLEVPGPKFRAGSVPPRPTVRYDVRALPIGGWARRGPLG 213 Query 180 LDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVG 239 +D++V R L A V G+WAYEA RVA ARRPR+G+DTD R+IP EV Sbjct 214 VDLLVAREGMGRVVAELRGADVPVVGLWAYEAVRVA----ARRPRVGLDTDHRSIPAEVD 269 Query 240 WIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLD--ESVQRPSTGDAVLAGG 297 +G AVHL KGCYRGQETVARVHN+GRPPR LVLLHLD + Q PS G V G Sbjct 270 LVG----PAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDQPPSAGTPVTRDG 325 Query 298 RTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVID 343 RTVG +GT V H ELG VALA++KR +P D L+ G E AA+ID Sbjct 326 RTVGFVGTAVHHHELGQVALAVVKRNVPDDARLLVG---ETAAMID 368 >gi|159036043|ref|YP_001535296.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] gi|157914878|gb|ABV96305.1| glycine cleavage T protein (aminomethyl transferase) [Salinispora arenicola CNS-205] Length=369 Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 169/350 (49%), Positives = 205/350 (59%), Gaps = 41/350 (11%) Query 18 HYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLSL 77 HYGDPL EQR + LVDRSHR V+ + G +R WLH+++TQH+++LP G T+ L L Sbjct 36 HYGDPLREQRTLETAVGLVDRSHRGVIAVPGEERLGWLHTLTTQHLAELPAGQGTELLVL 95 Query 78 DGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR--AADMAVLSLLG 135 G VE H + E GGTT+LDTEP LL YL +M F+S V PR D A+L+L+G Sbjct 96 SPHGHVEQHAMVAEDGGTTWLDTEPGDTGGLLGYLERMRFFSKVEPRDVTPDHALLALVG 155 Query 136 PRLAE-ERVLDALGL---DVL----------------PAEWLAVPLAGGGIVRRMPDGLA 175 P E L GL DVL + PL GG RR P G Sbjct 156 PAAVEAAATLGVSGLADPDVLEVPGPKFRAGSVPPRPTVRYDVRPLPVGGWARRGPLG-- 213 Query 176 GQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIP 235 +D++V R L AGV AG+WAYEA RV ARRPR+GVDTD RTIP Sbjct 214 ----VDLLVARDTMGQVVTDLRAAGVPVAGLWAYEAVRVG----ARRPRVGVDTDHRTIP 265 Query 236 HEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLD--ESVQRPSTGDAV 293 EV +G AVHL KGCYRGQETVARVHN+GRPPR LVLLHLD + + PS G V Sbjct 266 AEVDLVG----PAVHLEKGCYRGQETVARVHNMGRPPRRLVLLHLDGVTTDEPPSAGTPV 321 Query 294 LAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVID 343 + GR VG +GT V H ELG +ALA++KR +P D L+ G E AA+ID Sbjct 322 MREGRAVGFVGTAVHHHELGQIALAVVKRNVPDDARLLVG---ETAAMID 368 >gi|111220431|ref|YP_711225.1| hypothetical protein FRAAL0963 [Frankia alni ACN14a] gi|111147963|emb|CAJ59629.1| conserved hypothetical protein [Frankia alni ACN14a] Length=363 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 167/341 (49%), Positives = 204/341 (60%), Gaps = 32/341 (9%) Query 7 PDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDL 66 P G DA HYGDPL EQRA + A LVDRSHR V+ + G DR +WLHSI++QH+S L Sbjct 2 PAAGDDATVAAHYGDPLREQRALRDGAALVDRSHREVVRIGGPDRLSWLHSITSQHLSGL 61 Query 67 PEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR-- 124 ++ L L QG VE H + + G T++D EP LL YL M F V P Sbjct 62 GALRGSEALVLSPQGHVEHHLVLADDGTATWVDVEPGTAAGLLRYLESMRFLLRVEPADV 121 Query 125 AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAV-----PLAG---------GGIVRRM 170 +A AVLS++GP G D+ E LA+ P+ G G +VRRM Sbjct 122 SARTAVLSVVGPAAVPTVAAALGGADLDLPEPLALEPTGAPVTGPYPVARAADGTLVRRM 181 Query 171 PDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTD 230 G +D++V R A +RL AG PAG+ A++A R+A ARRPRLG +TD Sbjct 182 AYG------VDLLVDRATLAATAQRLLAAGAVPAGLSAFDALRIA----ARRPRLGRETD 231 Query 231 ERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTG 290 RTIPHEVGW+ A AVHL+KGCYRGQETVARVHNLGRPPR LVLLHLD +V P G Sbjct 232 HRTIPHEVGWL----ADAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAP--G 285 Query 291 DAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALV 331 AV A GR VG +GT H ELGP+ALA++KR +P ALV Sbjct 286 SAVTADGREVGFVGTSEMHEELGPIALAIVKRSVPAGAALV 326 >gi|284992990|ref|YP_003411544.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] gi|284066235|gb|ADB77173.1| folate-binding protein YgfZ [Geodermatophilus obscurus DSM 43160] Length=368 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 181/367 (50%), Positives = 210/367 (58%), Gaps = 18/367 (4%) Query 5 PAPDPGPDAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVS 64 P P D HYG PL EQR A LVDRS R VL + G DR TWLHS+ TQH+ Sbjct 11 PGAVPVEDGSVPAHYGSPLREQRELAEGAGLVDRSDRDVLVVPGADRLTWLHSLLTQHLE 70 Query 65 DLPEGASTQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR 124 L +G + L L G VE H + EL G+T++D EP G L YL +M F V P Sbjct 71 QLGDGVGAEALELSPNGHVEHHLVLAELAGSTWVDVEPGTGAALQTYLERMRFLLRVEPA 130 Query 125 --AADMAVLSLLGPRLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDV 182 A+LSL GPR + VL A GL V + + L GGG VRRMP G +D+ Sbjct 131 LVTGAWALLSLAGPR--GDEVLAAAGLPVPALPYAVLALDGGGWVRRMPPIGDGAPVVDL 188 Query 183 VVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEVGWIG 242 +V RG+ A L AG PAG+ AYEA RV ARRPRLGVDTD RTIP+E GW+ Sbjct 189 LVPRGELAARADALLAAGAAPAGVDAYEALRVE----ARRPRLGVDTDHRTIPNETGWL- 243 Query 243 GPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDE-SVQRPSTGDAVLAGGRTVG 301 AVHL KGCYRGQETVARVHNLGRPPR LVLLHLD + Q P G V G R VG Sbjct 244 ---TSAVHLAKGCYRGQETVARVHNLGRPPRRLVLLHLDGLAEQLPEAGTPVQLGARDVG 300 Query 302 RLGTVVEHVELGPVALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPA--DDVGAGRRA 359 R+G+VV H ELG VALAL+K+ + D L A A ID D P D V A R Sbjct 301 RVGSVVRHHELGVVALALVKQSVAMDAELTV---AGARAAIDPDDAPVTLDDTVAAARDR 357 Query 360 VERLRGG 366 V+ +R G Sbjct 358 VQAVRSG 364 >gi|213966464|ref|ZP_03394638.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] gi|213950890|gb|EEB62298.1| glycine cleavage T protein [Corynebacterium amycolatum SK46] Length=341 Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 155/351 (45%), Positives = 202/351 (58%), Gaps = 15/351 (4%) Query 17 WHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGASTQNLS 76 WHYG PL EQR Q D +VDRS+ V+ + G DR T+L+++ +Q V D G T+ L+ Sbjct 3 WHYGRPLVEQRHLQEDCGVVDRSYYRVIEVTGEDRLTYLNTLFSQKVDDATPGTVTEALN 62 Query 77 LDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPRAADMAVLSLLGP 136 LD G V H T L + +D P + LL YL MVFWS V A+ A++S++GP Sbjct 63 LDANGHVLHHMTLTVLDDSVLIDVPPVGFDSLLKYLNMMVFWSKVEIAEAERAIISVMGP 122 Query 137 RLAEERVLDALGLDVLPAEWLAVPLAGGGIVRRMPDGLAGQIELDVVVKRGDRADWQRRL 196 E VL + GL P A + G VR +P G++ DV+V+R D L Sbjct 123 NAPE--VLVSAGL-AFPQVGKATTV-GHSYVRHVPWPRGGRV--DVLVRRQDLVGAWEAL 176 Query 197 TQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTDERTIPHEV-GWIGGP-GAGAVHLNKG 254 AG P G+ +EA RV + RP LG+D DE+ IPHE WI AVHL+KG Sbjct 177 VAAGASPVGLMGWEAERVV----SLRPELGIDVDEKMIPHEAPRWIASEFDTAAVHLDKG 232 Query 255 CYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTGDAVLAGGRTVGRLGTVVEHVELGP 314 CYRGQETV+RVHN+GR PR+LV+L LD S P TGD V+ G R VGR+GTVV+H + GP Sbjct 233 CYRGQETVSRVHNVGRSPRVLVMLQLDGSATLPETGDPVMMGKRAVGRVGTVVQHADYGP 292 Query 315 VALALLKRGLPGDTALVTGPEAEVAAVIDVDSLPPADDVGAGRRAVERLRG 365 +ALALLKR LV G + A +D S+ + + GR A+ RLRG Sbjct 293 IALALLKRSAQEREGLVVG---DCAVAVDPSSIDRVEQLPPGRAAINRLRG 340 >gi|86739182|ref|YP_479582.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. CcI3] gi|86566044|gb|ABD09853.1| glycine cleavage T protein (aminomethyl transferase) [Frankia sp. CcI3] Length=385 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 172/376 (46%), Positives = 212/376 (57%), Gaps = 42/376 (11%) Query 12 DAGAIWHYGDPLGEQRAGQADAVLVDRSHRAVLTLDGGDRQTWLHSISTQHVSDLPEGAS 71 D HYGDPL EQRA + A +VDRSHR VL + G DR +WLHSI++QH+S L Sbjct 28 DDAVAAHYGDPLREQRAVRGGAAVVDRSHRDVLRVSGPDRLSWLHSITSQHLSALGALRG 87 Query 72 TQNLSLDGQGRVEDHWIQTELGGTTYLDTEPWRGEPLLAYLRKMVFWSMVTPR--AADMA 129 T+ L L G VE H + + G +T++D EP G LL YL M F V P A A Sbjct 88 TEALVLSPHGHVEHHLVLADDGTSTWVDVEPGTGGILLRYLESMRFMLRVEPADLGAVTA 147 Query 130 VLSLLGPR--------LAEERVLDALGLDVLPAE--WLAVPLAG---------GGIVRRM 170 VLS+LGPR L P + P+ G G +VRRM Sbjct 148 VLSVLGPRAAQVAAAALGGPGDGAPGPGLPEPQAPGPVGAPITGPYPVGRTGTGTLVRRM 207 Query 171 PDGLAGQIELDVVVKRGDRADWQRRLTQAGVRPAGIWAYEAHRVAHRVPARRPRLGVDTD 230 P G +D++V R D RL AG AG+ A++A R+A +RRPRL +TD Sbjct 208 PHG------VDLLVGRADLTGTVERLRAAGAGLAGLSAFDAMRIA----SRRPRLSRETD 257 Query 231 ERTIPHEVGWIGGPGAGAVHLNKGCYRGQETVARVHNLGRPPRMLVLLHLDESVQRPSTG 290 RTIPHEVGW+ A AVHL+KGCYRGQETVARVHNLGRPPR LVLLHLD +V P + Sbjct 258 HRTIPHEVGWL----ASAVHLDKGCYRGQETVARVHNLGRPPRRLVLLHLDGTVAAPRS- 312 Query 291 DAVLAGGRTVGRLGTVVEHVELGPVALALLKRGLPGDTALVTG-PE-AEVAAVIDVDSLP 348 V GGR VG +G+ H ELGP+ALA++KR +P D +LV P+ A +AA ID D P Sbjct 313 -TVTVGGREVGFVGSSEVHEELGPIALAVIKRSVPTDASLVVADPDGAPLAAAIDPDDEP 371 Query 349 PADDVGAGRRAVERLR 364 A +R RLR Sbjct 372 ATT---APKRPAGRLR 384 Lambda K H 0.319 0.139 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 697456489850 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40