BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0816c Length=140 Score E Sequences producing significant alignments: (Bits) Value gi|15607956|ref|NP_215331.1| thioredoxin ThiX [Mycobacterium tub... 276 5e-73 gi|289442219|ref|ZP_06431963.1| thioredoxin thiX [Mycobacterium ... 276 1e-72 gi|254363754|ref|ZP_04979800.1| thioredoxin thiX [Mycobacterium ... 275 1e-72 gi|340625831|ref|YP_004744283.1| putative thioredoxin THIX [Myco... 270 4e-71 gi|308370504|ref|ZP_07666951.1| thioredoxin thiX [Mycobacterium ... 270 5e-71 gi|308231644|ref|ZP_07413277.2| thioredoxin thiX [Mycobacterium ... 227 5e-58 gi|254821035|ref|ZP_05226036.1| thioredoxin [Mycobacterium intra... 174 6e-42 gi|41406745|ref|NP_959581.1| ThiX [Mycobacterium avium subsp. pa... 172 1e-41 gi|118462455|ref|YP_880033.1| thioredoxin [Mycobacterium avium 1... 172 1e-41 gi|342860293|ref|ZP_08716944.1| thioredoxin [Mycobacterium colom... 167 4e-40 gi|15828175|ref|NP_302438.1| thiredoxin [Mycobacterium leprae TN... 167 5e-40 gi|699219|gb|AAA62983.1| thiX [Mycobacterium leprae] 167 6e-40 gi|254773698|ref|ZP_05215214.1| thioredoxin [Mycobacterium avium... 164 3e-39 gi|240170984|ref|ZP_04749643.1| thioredoxin ThiX [Mycobacterium ... 154 5e-36 gi|183983627|ref|YP_001851918.1| thioredoxin ThiX [Mycobacterium... 152 1e-35 gi|118617127|ref|YP_905459.1| thioredoxin ThiX [Mycobacterium ul... 151 3e-35 gi|118472309|ref|YP_890014.1| thiredoxin [Mycobacterium smegmati... 143 1e-32 gi|120406047|ref|YP_955876.1| thioredoxin domain-containing prot... 140 4e-32 gi|296166328|ref|ZP_06848765.1| thioredoxin ThiX [Mycobacterium ... 140 5e-32 gi|108801490|ref|YP_641687.1| thioredoxin domain-containing prot... 139 1e-31 gi|145222240|ref|YP_001132918.1| thioredoxin domain-containing p... 137 4e-31 gi|333992183|ref|YP_004524797.1| thioredoxin ThiX [Mycobacterium... 137 7e-31 gi|169627843|ref|YP_001701492.1| thioredoxin ThiX [Mycobacterium... 119 1e-25 gi|54022563|ref|YP_116805.1| putative thioredoxin [Nocardia farc... 110 5e-23 gi|333918417|ref|YP_004491998.1| thioredoxin [Amycolicicoccus su... 102 2e-20 gi|229488324|ref|ZP_04382190.1| thiredoxin [Rhodococcus erythrop... 90.9 5e-17 gi|111021829|ref|YP_704801.1| thioredoxin [Rhodococcus jostii RH... 90.1 9e-17 gi|226364350|ref|YP_002782132.1| thioredoxin [Rhodococcus opacus... 88.6 3e-16 gi|312138321|ref|YP_004005657.1| thioredoxin [Rhodococcus equi 1... 79.7 1e-13 gi|226308295|ref|YP_002768255.1| thioredoxin [Rhodococcus erythr... 77.8 5e-13 gi|317509396|ref|ZP_07967015.1| thioredoxin [Segniliparus rugosu... 77.0 9e-13 gi|296395421|ref|YP_003660305.1| alkyl hydroperoxide reductase/ ... 73.6 9e-12 gi|302549552|ref|ZP_07301894.1| thioredoxin [Streptomyces virido... 70.1 1e-10 gi|257057708|ref|YP_003135540.1| thiol-disulfide isomerase-like ... 69.3 2e-10 gi|269124863|ref|YP_003298233.1| hypothetical protein Tcur_0600 ... 68.9 2e-10 gi|290962560|ref|YP_003493742.1| thioredoxin [Streptomyces scabi... 68.9 2e-10 gi|297197815|ref|ZP_06915212.1| thioredoxin [Streptomyces sviceu... 67.4 7e-10 gi|134103527|ref|YP_001109188.1| thioredoxin [Saccharopolyspora ... 66.2 2e-09 gi|311895113|dbj|BAJ27521.1| putative thioredoxin [Kitasatospora... 65.9 2e-09 gi|311743222|ref|ZP_07717029.1| ThiX protein [Aeromicrobium mari... 65.9 2e-09 gi|291441112|ref|ZP_06580502.1| thioredoxin [Streptomyces ghanae... 65.5 2e-09 gi|302531006|ref|ZP_07283348.1| thioredoxin [Streptomyces sp. AA... 64.7 4e-09 gi|21219599|ref|NP_625378.1| thioredoxin [Streptomyces coelicolo... 64.7 5e-09 gi|302867772|ref|YP_003836409.1| thioredoxin domain-containing p... 64.3 5e-09 gi|284028953|ref|YP_003378884.1| hypothetical protein Kfla_0980 ... 63.9 7e-09 gi|90194297|gb|ABD92692.1| putative thioredoxin [Amycolatopsis m... 63.2 1e-08 gi|300790811|ref|YP_003771102.1| thioredoxin [Amycolatopsis medi... 63.2 1e-08 gi|126348342|emb|CAJ90064.1| putative thioredoxin [Streptomyces ... 62.8 1e-08 gi|182440314|ref|YP_001828033.1| putative thioredoxin [Streptomy... 62.8 2e-08 gi|310643791|ref|YP_003948549.1| thioredoxin [Paenibacillus poly... 62.4 2e-08 >gi|15607956|ref|NP_215331.1| thioredoxin ThiX [Mycobacterium tuberculosis H37Rv] gi|15840229|ref|NP_335266.1| thioredoxin ThiX, putative [Mycobacterium tuberculosis CDC1551] gi|31792004|ref|NP_854497.1| thioredoxin ThiX [Mycobacterium bovis AF2122/97] 54 more sequence titles Length=140 Score = 276 bits (707), Expect = 5e-73, Method: Compositional matrix adjust. Identities = 140/140 (100%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR Sbjct 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY Sbjct 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 Query 121 RTSGVPKAADLRSALKPLLA 140 RTSGVPKAADLRSALKPLLA Sbjct 121 RTSGVPKAADLRSALKPLLA 140 >gi|289442219|ref|ZP_06431963.1| thioredoxin thiX [Mycobacterium tuberculosis T46] gi|289568769|ref|ZP_06448996.1| thioredoxin thiX [Mycobacterium tuberculosis T17] gi|289749332|ref|ZP_06508710.1| thioredoxin thiX [Mycobacterium tuberculosis T92] gi|289752865|ref|ZP_06512243.1| thioredoxin thiX [Mycobacterium tuberculosis EAS054] gi|289415138|gb|EFD12378.1| thioredoxin thiX [Mycobacterium tuberculosis T46] gi|289542523|gb|EFD46171.1| thioredoxin thiX [Mycobacterium tuberculosis T17] gi|289689919|gb|EFD57348.1| thioredoxin thiX [Mycobacterium tuberculosis T92] gi|289693452|gb|EFD60881.1| thioredoxin thiX [Mycobacterium tuberculosis EAS054] Length=140 Score = 276 bits (705), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTTMIV+SVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR Sbjct 1 MTTMIVSSVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY Sbjct 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 Query 121 RTSGVPKAADLRSALKPLLA 140 RTSGVPKAADLRSALKPLLA Sbjct 121 RTSGVPKAADLRSALKPLLA 140 >gi|254363754|ref|ZP_04979800.1| thioredoxin thiX [Mycobacterium tuberculosis str. Haarlem] gi|134149268|gb|EBA41313.1| thioredoxin thiX [Mycobacterium tuberculosis str. Haarlem] Length=140 Score = 275 bits (704), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 139/140 (99%), Positives = 140/140 (100%), Gaps = 0/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR Sbjct 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV+SLPTTLIFDVDGRQRY Sbjct 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVVSLPTTLIFDVDGRQRY 120 Query 121 RTSGVPKAADLRSALKPLLA 140 RTSGVPKAADLRSALKPLLA Sbjct 121 RTSGVPKAADLRSALKPLLA 140 >gi|340625831|ref|YP_004744283.1| putative thioredoxin THIX [Mycobacterium canettii CIPT 140010059] gi|340004021|emb|CCC43157.1| putative thioredoxin THIX [Mycobacterium canettii CIPT 140010059] Length=140 Score = 270 bits (691), Expect = 4e-71, Method: Compositional matrix adjust. Identities = 138/140 (99%), Positives = 138/140 (99%), Gaps = 0/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAE GLSGAGPTVVHFR Sbjct 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAERGLSGAGPTVVHFR 60 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 APGCAPCDRVRR VGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY Sbjct 61 APGCAPCDRVRRVVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 Query 121 RTSGVPKAADLRSALKPLLA 140 RTSGVPKAADLRSALKPLLA Sbjct 121 RTSGVPKAADLRSALKPLLA 140 >gi|308370504|ref|ZP_07666951.1| thioredoxin thiX [Mycobacterium tuberculosis SUMu003] gi|308331703|gb|EFP20554.1| thioredoxin thiX [Mycobacterium tuberculosis SUMu003] Length=137 Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 137/137 (100%), Positives = 137/137 (100%), Gaps = 0/137 (0%) Query 4 MIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPG 63 MIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPG Sbjct 1 MIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPG 60 Query 64 CAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTS 123 CAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTS Sbjct 61 CAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTS 120 Query 124 GVPKAADLRSALKPLLA 140 GVPKAADLRSALKPLLA Sbjct 121 GVPKAADLRSALKPLLA 137 >gi|308231644|ref|ZP_07413277.2| thioredoxin thiX [Mycobacterium tuberculosis SUMu001] gi|308370153|ref|ZP_07666872.1| thioredoxin thiX [Mycobacterium tuberculosis SUMu002] gi|308371768|ref|ZP_07426168.2| thioredoxin thiX [Mycobacterium tuberculosis SUMu004] 9 more sequence titles Length=114 Score = 227 bits (578), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 113/114 (99%), Positives = 114/114 (100%), Gaps = 0/114 (0%) Query 27 VILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAH 86 +ILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAH Sbjct 1 MILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAH 60 Query 87 IEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 140 IEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA Sbjct 61 IEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 114 >gi|254821035|ref|ZP_05226036.1| thioredoxin [Mycobacterium intracellulare ATCC 13950] Length=144 Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 101/146 (70%), Positives = 114/146 (79%), Gaps = 8/146 (5%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREV--GPETTPAAPARTAELGLSGAGPTVVH 58 M T+IV +VA A+AT+ WLLTRRS +RE+ GP+ PAA A LGLS GPTVVH Sbjct 1 MMTVIVVTVAALAVATLLGWLLTRRSGSIREIDPGPDRDPAA--DVAALGLSRGGPTVVH 58 Query 59 FRAPGCAPCDRVRRGVGDVCADLGD----VAHIEVDLDSNPQAARRFSVLSLPTTLIFDV 114 F AP C PCDRVRR V VC DLGD +AH+EVDLD+NP+ ARR+SVLSLPTTLIFD+ Sbjct 59 FSAPWCGPCDRVRRVVTQVCDDLGDPGSPIAHVEVDLDANPETARRYSVLSLPTTLIFDI 118 Query 115 DGRQRYRTSGVPKAADLRSALKPLLA 140 DGRQRYRTSGVP AADLRSALKPLLA Sbjct 119 DGRQRYRTSGVPSAADLRSALKPLLA 144 >gi|41406745|ref|NP_959581.1| ThiX [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395095|gb|AAS02964.1| ThiX [Mycobacterium avium subsp. paratuberculosis K-10] Length=139 Score = 172 bits (437), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/140 (67%), Positives = 105/140 (75%), Gaps = 1/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTT++V A A AT+A WLLTRRS +RE+ A LGLS GPTVVHF Sbjct 1 MTTLVVI-FAVLAAATLAGWLLTRRSRRIREIDAGPQRDTGDDVAALGLSRDGPTVVHFS 59 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 AP C PCDRVRR V VCADLG VAH+E+DLD++P ARR++VLSLPTTLIFD DGRQRY Sbjct 60 APWCGPCDRVRRVVDQVCADLGGVAHVEIDLDAHPDTARRYAVLSLPTTLIFDADGRQRY 119 Query 121 RTSGVPKAADLRSALKPLLA 140 R+SGVP AADLRSALKPLLA Sbjct 120 RSSGVPGAADLRSALKPLLA 139 >gi|118462455|ref|YP_880033.1| thioredoxin [Mycobacterium avium 104] gi|118163742|gb|ABK64639.1| Thioredoxin [Mycobacterium avium 104] gi|336458333|gb|EGO37312.1| thiol-disulfide isomerase-like thioredoxin [Mycobacterium avium subsp. paratuberculosis S397] Length=139 Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 93/140 (67%), Positives = 105/140 (75%), Gaps = 1/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTT++V A A AT+A WLLTRRS +RE+ A LGLS GPTVVHF Sbjct 1 MTTLVVI-FAVLAAATLAGWLLTRRSGRIREIDAGPQRDTGDDVAALGLSRDGPTVVHFS 59 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 AP C PCDRVRR V VCADLG VAH+E+DLD++P ARR++VLSLPTTLIFD DGRQRY Sbjct 60 APWCGPCDRVRRVVDQVCADLGGVAHVEIDLDAHPDTARRYAVLSLPTTLIFDADGRQRY 119 Query 121 RTSGVPKAADLRSALKPLLA 140 R+SGVP AADLRSALKPLLA Sbjct 120 RSSGVPGAADLRSALKPLLA 139 >gi|342860293|ref|ZP_08716944.1| thioredoxin [Mycobacterium colombiense CECT 3035] gi|342131948|gb|EGT85189.1| thioredoxin [Mycobacterium colombiense CECT 3035] Length=139 Score = 167 bits (424), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 86/118 (73%), Positives = 93/118 (79%), Gaps = 0/118 (0%) Query 23 TRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLG 82 TRRS +RE+ A A LGLS GPTVVHF AP C PCDRVRR V VC DLG Sbjct 22 TRRSGRIREIATTPDRDTDADIAALGLSRNGPTVVHFSAPWCGPCDRVRRVVQQVCDDLG 81 Query 83 DVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 140 DVAH+EVDLD+NP+ ARR+SVLSLPTTLIFDVDGRQRYRTSGVP +ADLRSALKPLLA Sbjct 82 DVAHVEVDLDANPETARRYSVLSLPTTLIFDVDGRQRYRTSGVPSSADLRSALKPLLA 139 >gi|15828175|ref|NP_302438.1| thiredoxin [Mycobacterium leprae TN] gi|221230652|ref|YP_002504068.1| thiredoxin [Mycobacterium leprae Br4923] gi|13093729|emb|CAC31151.1| thiredoxin [Mycobacterium leprae] gi|219933759|emb|CAR72293.1| thiredoxin [Mycobacterium leprae Br4923] Length=140 Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 90/141 (64%), Positives = 100/141 (71%), Gaps = 2/141 (1%) Query 1 MTTMIVASVATGAL-ATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHF 59 M T IVA++ G L A RWL TR S + E+ TA+LGLS GPT+VHF Sbjct 1 MMTAIVATITVGMLTAFTGRWL-TRHSGNVHEICSGPGQGTGTDTADLGLSRTGPTIVHF 59 Query 60 RAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQR 119 AP C PCDRVRR V VC DL DVAHIE+DLD+NP A RRFSVLSLPTTLIFD DG+QR Sbjct 60 SAPWCGPCDRVRRVVYQVCKDLPDVAHIEIDLDTNPAAVRRFSVLSLPTTLIFDTDGQQR 119 Query 120 YRTSGVPKAADLRSALKPLLA 140 YRTSGVPKA DL S L+PLLA Sbjct 120 YRTSGVPKAFDLLSTLEPLLA 140 >gi|699219|gb|AAA62983.1| thiX [Mycobacterium leprae] Length=172 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 90/141 (64%), Positives = 100/141 (71%), Gaps = 2/141 (1%) Query 1 MTTMIVASVATGAL-ATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHF 59 M T IVA++ G L A RWL TR S + E+ TA+LGLS GPT+VHF Sbjct 33 MMTAIVATITVGMLTAFTGRWL-TRHSGNVHEICSGPGQGTGTDTADLGLSRTGPTIVHF 91 Query 60 RAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQR 119 AP C PCDRVRR V VC DL DVAHIE+DLD+NP A RRFSVLSLPTTLIFD DG+QR Sbjct 92 SAPWCGPCDRVRRVVYQVCKDLPDVAHIEIDLDTNPAAVRRFSVLSLPTTLIFDTDGQQR 151 Query 120 YRTSGVPKAADLRSALKPLLA 140 YRTSGVPKA DL S L+PLLA Sbjct 152 YRTSGVPKAFDLLSTLEPLLA 172 >gi|254773698|ref|ZP_05215214.1| thioredoxin [Mycobacterium avium subsp. avium ATCC 25291] Length=139 Score = 164 bits (416), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/140 (64%), Positives = 100/140 (72%), Gaps = 1/140 (0%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 MTT++V A WLLTRRS +RE+ A LGLS GPTVVHF Sbjct 1 MTTLVVILAVLAAATLAG-WLLTRRSGRIREIDAGPQRDTGDDVAALGLSRDGPTVVHFS 59 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 AP C PCDRVRR V VCADLG VAH+E+DLD++P ARR++VLSLPTTLIFD DGRQRY Sbjct 60 APWCGPCDRVRRVVDQVCADLGGVAHVEIDLDAHPDTARRYAVLSLPTTLIFDADGRQRY 119 Query 121 RTSGVPKAADLRSALKPLLA 140 R+SGVP AADLRSALKPLLA Sbjct 120 RSSGVPGAADLRSALKPLLA 139 >gi|240170984|ref|ZP_04749643.1| thioredoxin ThiX [Mycobacterium kansasii ATCC 12478] Length=134 Score = 154 bits (389), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 79/125 (64%), Positives = 92/125 (74%), Gaps = 4/125 (3%) Query 15 ATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGV 74 AT W + RRS +LRE G A ++LGLS GPTVVHF A C PC VRR V Sbjct 13 ATAIGWTVNRRSGVLRETGA----AVHQDASDLGLSDTGPTVVHFSAAWCGPCAVVRRVV 68 Query 75 GDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSA 134 G+VCA L DVAH+E+D+D+NP AA+R SVLSLPTT IFD DGRQ YRT+GVPKAADLR+A Sbjct 69 GEVCAGLPDVAHVEIDIDANPVAAQRMSVLSLPTTFIFDADGRQLYRTAGVPKAADLRAA 128 Query 135 LKPLL 139 L+PLL Sbjct 129 LQPLL 133 >gi|183983627|ref|YP_001851918.1| thioredoxin ThiX [Mycobacterium marinum M] gi|183176953|gb|ACC42063.1| thioredoxin ThiX [Mycobacterium marinum M] Length=142 Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 83/140 (60%), Positives = 99/140 (71%), Gaps = 3/140 (2%) Query 2 TTMIVASVATGAL--ATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHF 59 TT+I AS AL A+ + RR+ +LRE GP +T A T++LGLS GPTV+HF Sbjct 3 TTLIAASAIVAALTGASAIGLTVNRRAGVLRETGP-STDRAHQDTSDLGLSETGPTVMHF 61 Query 60 RAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQR 119 A C PC VRR V VC +L DVAH+EVD+D+NP AA+R SVLSLPTT IFD DGRQR Sbjct 62 SANWCGPCAAVRRVVDQVCEELPDVAHVEVDIDANPVAAKRLSVLSLPTTFIFDTDGRQR 121 Query 120 YRTSGVPKAADLRSALKPLL 139 YRT+GVPK ADLR+ L PLL Sbjct 122 YRTAGVPKVADLRATLIPLL 141 >gi|118617127|ref|YP_905459.1| thioredoxin ThiX [Mycobacterium ulcerans Agy99] gi|118569237|gb|ABL03988.1| thioredoxin ThiX [Mycobacterium ulcerans Agy99] Length=142 Score = 151 bits (381), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 83/140 (60%), Positives = 98/140 (70%), Gaps = 3/140 (2%) Query 2 TTMIVASVATGAL--ATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHF 59 TT+I AS AL A+ + RR+ +LRE GP +T A T++LGLS GPTV+HF Sbjct 3 TTLIAASAIVAALTGASAIGLTVNRRAGVLRETGP-STDRAHQDTSDLGLSETGPTVMHF 61 Query 60 RAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQR 119 A C PC VRR V VC +L DVAH+EVD D+NP AA+R SVLSLPTT IFD DGRQR Sbjct 62 SANWCGPCAAVRRVVDQVCEELPDVAHVEVDSDANPVAAKRLSVLSLPTTFIFDTDGRQR 121 Query 120 YRTSGVPKAADLRSALKPLL 139 YRT+GVPK ADLR+ L PLL Sbjct 122 YRTAGVPKVADLRATLIPLL 141 >gi|118472309|ref|YP_890014.1| thiredoxin [Mycobacterium smegmatis str. MC2 155] gi|118173596|gb|ABK74492.1| thiredoxin [Mycobacterium smegmatis str. MC2 155] Length=154 Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 76/130 (59%), Positives = 92/130 (71%), Gaps = 10/130 (7%) Query 21 LLTRRSVILREVGP------ETTPAAPART----AELGLSGAGPTVVHFRAPGCAPCDRV 70 +LTRRS +R+ GP ET A A +LGLS GPT++HF A C PC V Sbjct 25 VLTRRSGRVRQTGPGSAVGAETDAVAQAEAERNLTDLGLSRTGPTILHFSAEWCGPCAGV 84 Query 71 RRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAAD 130 RR V VCA+L +AH+E+D+D+NPQAARR SVLSLPTT IFD G QRYRTSGVP+AAD Sbjct 85 RRVVDQVCAELPAIAHVEIDMDANPQAARRLSVLSLPTTFIFDARGHQRYRTSGVPRAAD 144 Query 131 LRSALKPLLA 140 LR+A++PLLA Sbjct 145 LRTAVEPLLA 154 >gi|120406047|ref|YP_955876.1| thioredoxin domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958865|gb|ABM15870.1| Thioredoxin domain [Mycobacterium vanbaalenii PYR-1] Length=143 Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 78/138 (57%), Positives = 96/138 (70%), Gaps = 3/138 (2%) Query 4 MIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAE-LGLSGAGPTVVHFRAP 62 +I +A LA + LLT RS +++ G PA + LGLS GPTV+HF A Sbjct 8 VIAVLIAAFGLAFVIGRLLTLRSGLIK--GAAEWPALDDSDVDALGLSRTGPTVLHFSAV 65 Query 63 GCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRT 122 C PC VRR V VCA+L +V H+E+DLD++P++AR+ SVLSLPTT IFD DGRQRYRT Sbjct 66 WCGPCAGVRRVVDQVCAELPEVTHVEIDLDADPESARKLSVLSLPTTFIFDADGRQRYRT 125 Query 123 SGVPKAADLRSALKPLLA 140 SGVP AADLRSAL+PLLA Sbjct 126 SGVPTAADLRSALQPLLA 143 >gi|296166328|ref|ZP_06848765.1| thioredoxin ThiX [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898337|gb|EFG77906.1| thioredoxin ThiX [Mycobacterium parascrofulaceum ATCC BAA-614] Length=139 Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 81/143 (57%), Positives = 96/143 (68%), Gaps = 7/143 (4%) Query 1 MTTMIVASVA---TGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVV 57 M+T+++A A AT A L+ RRS +LRE P P A A +GL PTVV Sbjct 1 MSTLVIAGTALVTALGAATAAGVLVNRRSGVLRETDPGPRPDA----AAIGLPENRPTVV 56 Query 58 HFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGR 117 HF A C PC VRR V VC L DVAH+E+D+D+NP AA++ SVLSLPTT IFD GR Sbjct 57 HFTAAWCGPCASVRRVVEQVCGALPDVAHLEIDIDANPAAAKQLSVLSLPTTFIFDAAGR 116 Query 118 QRYRTSGVPKAADLRSALKPLLA 140 QRYRT+GVPKAADLR AL+PLLA Sbjct 117 QRYRTAGVPKAADLRQALQPLLA 139 >gi|108801490|ref|YP_641687.1| thioredoxin domain-containing protein [Mycobacterium sp. MCS] gi|119870643|ref|YP_940595.1| thioredoxin domain-containing protein [Mycobacterium sp. KMS] gi|126437475|ref|YP_001073166.1| thioredoxin domain-containing protein [Mycobacterium sp. JLS] gi|108771909|gb|ABG10631.1| Thioredoxin domain protein [Mycobacterium sp. MCS] gi|119696732|gb|ABL93805.1| Thioredoxin domain [Mycobacterium sp. KMS] gi|126237275|gb|ABO00676.1| Thioredoxin domain [Mycobacterium sp. JLS] Length=140 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 69/102 (68%), Positives = 79/102 (78%), Gaps = 0/102 (0%) Query 39 AAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAA 98 AA T+ LGLS GPTV+HF A C PCD VRR V VC +L +VAH E+D+D+NP+AA Sbjct 39 AANIDTSGLGLSDTGPTVLHFSADWCGPCDAVRRVVDQVCRELPEVAHAEIDIDANPEAA 98 Query 99 RRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 140 RR SVLSLPTT+IFD GR RYRTSGVPK ADLRS L+PLLA Sbjct 99 RRLSVLSLPTTIIFDAHGRPRYRTSGVPKVADLRSVLEPLLA 140 >gi|145222240|ref|YP_001132918.1| thioredoxin domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|315442679|ref|YP_004075558.1| thioredoxin [Mycobacterium sp. Spyr1] gi|145214726|gb|ABP44130.1| Thioredoxin domain [Mycobacterium gilvum PYR-GCK] gi|315260982|gb|ADT97723.1| Thioredoxin [Mycobacterium sp. Spyr1] Length=140 Score = 137 bits (346), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 71/110 (65%), Positives = 80/110 (73%), Gaps = 0/110 (0%) Query 31 EVGPETTPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVD 90 E+ P A TA LGLS GPTV+HF A C PC VRR V VC DL V H+E+D Sbjct 31 EMTPTDDEARAVDTAGLGLSTTGPTVLHFSASWCGPCAGVRRVVDRVCEDLPAVEHVEID 90 Query 91 LDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 140 +D+NP+AARR SVLSLPTT+IFD DGR RYRTS VP AADLRSAL+PLLA Sbjct 91 MDANPEAARRLSVLSLPTTIIFDADGRPRYRTSRVPTAADLRSALEPLLA 140 >gi|333992183|ref|YP_004524797.1| thioredoxin ThiX [Mycobacterium sp. JDM601] gi|333488151|gb|AEF37543.1| thioredoxin ThiX [Mycobacterium sp. JDM601] Length=143 Score = 137 bits (344), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 83/144 (58%), Positives = 96/144 (67%), Gaps = 8/144 (5%) Query 4 MIVASVATGAL-ATIARWLLTRRSVILREVG---PETTPAAPARTAELGLSGAGPTVVHF 59 M V ++ TG L A + W ++RR+ L+ V PE A A LGL PTVVHF Sbjct 1 MSVVAMLTGLLLAGVIGWWMSRRAGALKAVAATAPEIG-ADDGGAAFLGLQPGRPTVVHF 59 Query 60 RAPGCAPCDRVRRGVGDVCADLG---DVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDG 116 AP C PC VRR V VC DLG ++AH EVD+D+NP AARRFSVLSLPTTLIFD G Sbjct 60 SAPWCGPCAGVRRVVQTVCDDLGGPGEIAHREVDIDTNPAAARRFSVLSLPTTLIFDAAG 119 Query 117 RQRYRTSGVPKAADLRSALKPLLA 140 RQRYR +GVP AA LRSAL+PLLA Sbjct 120 RQRYRAAGVPTAAALRSALEPLLA 143 >gi|169627843|ref|YP_001701492.1| thioredoxin ThiX [Mycobacterium abscessus ATCC 19977] gi|169239810|emb|CAM60838.1| Probable thioredoxin ThiX [Mycobacterium abscessus] Length=155 Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 75/136 (56%), Positives = 87/136 (64%), Gaps = 3/136 (2%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 +T +I +VA A + IA + RS LRE GP T A + LS GPT+VHF Sbjct 17 VTAVIAIAVALLASSLIA-VAIKSRSGKLRE-GPGGTDDVQAPPG-IELSATGPTIVHFS 73 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 A C PC VRR V V AD +VAHIEVD+D+NP AAR SVLSLPTT IFD GRQ Y Sbjct 74 AVWCGPCAAVRRVVDQVSADHPEVAHIEVDIDANPDAARVLSVLSLPTTFIFDATGRQAY 133 Query 121 RTSGVPKAADLRSALK 136 R SGVPKA DLR+AL+ Sbjct 134 RVSGVPKATDLRTALQ 149 >gi|54022563|ref|YP_116805.1| putative thioredoxin [Nocardia farcinica IFM 10152] gi|54014071|dbj|BAD55441.1| putative thioredoxin [Nocardia farcinica IFM 10152] Length=148 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 62/115 (54%), Positives = 72/115 (63%), Gaps = 12/115 (10%) Query 38 PAAPART--------AELGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAH--- 86 PAAPA T A G++G GP V+HF A C PC VRR V V ADL H Sbjct 30 PAAPASTNPERAGLLAAAGVTGTGPAVLHFSAEWCGPCAAVRRVVAGVTADLAAEPHPPQ 89 Query 87 -IEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLLA 140 IE+D+D+ P AR +VLSLPTT +FD GR+R+R SGVPKA DLRSAL PL A Sbjct 90 DIEIDIDAEPALARELNVLSLPTTFVFDAAGRERFRISGVPKAGDLRSALAPLTA 144 >gi|333918417|ref|YP_004491998.1| thioredoxin [Amycolicicoccus subflavus DQS3-9A1] gi|333480638|gb|AEF39198.1| thioredoxin [Amycolicicoccus subflavus DQS3-9A1] Length=148 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 59/143 (42%), Positives = 76/143 (54%), Gaps = 5/143 (3%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILR---EVGPETTPAAPARTA--ELGLSGAGPT 55 M+ +++ S AT + W R +L P T A A + E GLS GPT Sbjct 1 MSGLLILSSATAIATAVGIWWQRRNGAVLAAPASAEPADTAAGSATSELLEAGLSVDGPT 60 Query 56 VVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVD 115 VVHF A C PC VRR + + V HIE+D+D PQ R V SLPTTL++D + Sbjct 61 VVHFTADWCGPCAAVRRVISTTLPEFPHVTHIELDIDDYPQLTRTLGVRSLPTTLVYDAE 120 Query 116 GRQRYRTSGVPKAADLRSALKPL 138 +QRYR GVP A+ LR AL P+ Sbjct 121 MQQRYRIPGVPTASALREALIPV 143 >gi|229488324|ref|ZP_04382190.1| thiredoxin [Rhodococcus erythropolis SK121] gi|229323828|gb|EEN89583.1| thiredoxin [Rhodococcus erythropolis SK121] Length=158 Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 56/127 (45%), Positives = 69/127 (55%), Gaps = 9/127 (7%) Query 21 LLTRRSVILREVGPETTPAAPARTAELGLSG-----AGPTVVHFRAPGCAPCDRVRRGVG 75 L R+ +R P T AA +R L +G GP V+HF A C PC VRR VG Sbjct 20 FLKSRNGKVRVTTPAATGAADSRLELLRAAGVSSPNGGPVVLHFSADWCGPCAAVRRVVG 79 Query 76 DVCADLGDV----AHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADL 131 V + D IE+D+D P AR SVLSLPTT I D +++R SGVP AADL Sbjct 80 QVVISMADAPRPPVEIELDIDKEPALAREMSVLSLPTTFILDGGLEEQFRVSGVPSAADL 139 Query 132 RSALKPL 138 ++AL PL Sbjct 140 KAALVPL 146 >gi|111021829|ref|YP_704801.1| thioredoxin [Rhodococcus jostii RHA1] gi|110821359|gb|ABG96643.1| probable thioredoxin [Rhodococcus jostii RHA1] Length=158 Score = 90.1 bits (222), Expect = 9e-17, Method: Compositional matrix adjust. Identities = 62/151 (42%), Positives = 76/151 (51%), Gaps = 17/151 (11%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGP------ 54 +T +++A A A + W RR +R G T R L +G GP Sbjct 4 ITLLLIALFAAVAFGLV--W--QRREGTVRSTGGTTGVVTDQRRLLLEAAGVGPASPEHP 59 Query 55 ---TVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEV----DLDSNPQAARRFSVLSLP 107 TV+HF A C PC VRR VG V ADL V D+D P A+ VLSLP Sbjct 60 RRATVLHFSADWCGPCAAVRRVVGQVVADLAGEPEPPVEVEVDIDEYPALAKELGVLSLP 119 Query 108 TTLIFDVDGRQRYRTSGVPKAADLRSALKPL 138 TT I D D +QR+R SGVP A DLR+AL+PL Sbjct 120 TTFILDADLQQRFRVSGVPAATDLRAALEPL 150 >gi|226364350|ref|YP_002782132.1| thioredoxin [Rhodococcus opacus B4] gi|226242839|dbj|BAH53187.1| putative thioredoxin [Rhodococcus opacus B4] Length=158 Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 58/128 (46%), Positives = 66/128 (52%), Gaps = 13/128 (10%) Query 24 RRSVILREVGPETTPAAPARTAELGLSGAGP---------TVVHFRAPGCAPCDRVRRGV 74 RR +R G T R L +G GP TV+HF A C PC VRR V Sbjct 23 RRQGKVRTTGETTAVVTDQRRLLLEAAGIGPQSPEHPRRATVLHFSADWCGPCAAVRRVV 82 Query 75 GDVCADLGDVAHIEV----DLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAAD 130 G V ADL V D+D P A+ VLSLPTT I D D +QR+R SGVP AAD Sbjct 83 GQVVADLAGEPEPPVEVEVDIDEYPALAKELGVLSLPTTFILDADLQQRFRVSGVPTAAD 142 Query 131 LRSALKPL 138 LR+AL PL Sbjct 143 LRAALGPL 150 >gi|312138321|ref|YP_004005657.1| thioredoxin [Rhodococcus equi 103S] gi|325674762|ref|ZP_08154449.1| thioredoxin [Rhodococcus equi ATCC 33707] gi|311887660|emb|CBH46972.1| putative secreted thioredoxin [Rhodococcus equi 103S] gi|325554348|gb|EGD24023.1| thioredoxin [Rhodococcus equi ATCC 33707] Length=157 Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 47/105 (45%), Positives = 58/105 (56%), Gaps = 8/105 (7%) Query 43 RTAELGLSGAG-PTVVHFRAPGCAPCDRVRRGVGDVCADLGD-------VAHIEVDLDSN 94 + A G++ G P V+HF A C PC VRR VG V A +EVD+D + Sbjct 46 QLAAAGVTATGRPIVLHFSADWCGPCAAVRRVVGQVLARFEADPDGTPAATEVEVDIDEH 105 Query 95 PQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLL 139 P A+ VLSLPTT I D +R+R SGVP A DL +AL PLL Sbjct 106 PALAKTLGVLSLPTTFILDGALTERFRISGVPSAPDLETALAPLL 150 >gi|226308295|ref|YP_002768255.1| thioredoxin [Rhodococcus erythropolis PR4] gi|226187412|dbj|BAH35516.1| putative thioredoxin [Rhodococcus erythropolis PR4] Length=158 Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 55/128 (43%), Positives = 69/128 (54%), Gaps = 9/128 (7%) Query 20 WLLTRRSVILREVGPETTPAAPARTAELGLSG-----AGPTVVHFRAPGCAPCDRVRRGV 74 + L R+ +R P AA +R L +G GP V+HF A C PC VRR V Sbjct 19 FFLKSRNGKVRVTTPAAAGAADSRLELLSSAGVSSPNGGPVVLHFSADWCGPCAAVRRVV 78 Query 75 GDVCADLGDV----AHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAAD 130 G V + D IE+D+D P AR SVLSLPTT I D +++R SGVP AAD Sbjct 79 GQVVVSMADAPRPPVEIELDIDKEPALAREMSVLSLPTTFILDGGLEEQFRVSGVPSAAD 138 Query 131 LRSALKPL 138 L++AL PL Sbjct 139 LKAALVPL 146 >gi|317509396|ref|ZP_07967015.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] gi|316252319|gb|EFV11770.1| thioredoxin [Segniliparus rugosus ATCC BAA-974] Length=144 Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 49/105 (47%), Positives = 58/105 (56%), Gaps = 8/105 (7%) Query 38 PAAPARTA----ELGLSGAG---PTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVD 90 PAAPA A EL G G P V+HF A CAPC R + V + G +E+D Sbjct 36 PAAPAVQALNLGELADHGVGAGEPVVLHFSATWCAPCKAARTVIESVVSQ-GSGRDVELD 94 Query 91 LDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 LD N AR+ VLSLPTTL++D DG R +GVPKA LR L Sbjct 95 LDENQALARKLGVLSLPTTLVYDGDGALLARIAGVPKADKLRELL 139 >gi|296395421|ref|YP_003660305.1| alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Segniliparus rotundus DSM 44985] gi|296182568|gb|ADG99474.1| alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen [Segniliparus rotundus DSM 44985] Length=138 Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 48/135 (36%), Positives = 68/135 (51%), Gaps = 6/135 (4%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 + ++ VA GAL W + + L + GP A G+ P V+HF Sbjct 10 LAVALIVGVAVGAL-----WRSRQGKIRLAKPGPSAPDPHVDELAGHGVGSGEPVVMHFS 64 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 A CAPC R + V A+ G +E+DLD + AR+ VLSLPTTL+++ +G Sbjct 65 AAWCAPCSAARAVIQSVTAE-GRGRDVELDLDEHSALARKLGVLSLPTTLVYNGEGTLVA 123 Query 121 RTSGVPKAADLRSAL 135 R +GVPKA LR+ L Sbjct 124 RIAGVPKADKLRALL 138 >gi|302549552|ref|ZP_07301894.1| thioredoxin [Streptomyces viridochromogenes DSM 40736] gi|302467170|gb|EFL30263.1| thioredoxin [Streptomyces viridochromogenes DSM 40736] Length=141 Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 38/92 (42%), Positives = 54/92 (59%), Gaps = 1/92 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 AELG G T+V F + CAPC RR +G+V + VAH+E+D +++ RR + Sbjct 46 AELGAELGERATLVQFSSAFCAPCRATRRVLGEVAGMVPGVAHVEIDAEAHLDLVRRLDI 105 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 L PT L+ D DGR R +G P+ AD+ +AL Sbjct 106 LKTPTVLVLDADGRVVRRATGQPRKADVIAAL 137 >gi|257057708|ref|YP_003135540.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora viridis DSM 43017] gi|256587580|gb|ACU98713.1| thiol-disulfide isomerase-like thioredoxin [Saccharomonospora viridis DSM 43017] Length=145 Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/137 (36%), Positives = 63/137 (46%), Gaps = 6/137 (4%) Query 1 MTTMIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAELGLSGAGPTVVHFR 60 + +VA V TG L L +R+ + R T P + L T+V Sbjct 9 LVATLVAGVLTGGL------LRSRQGRVRRSAEEATGPPSLPGPVSDALVADAVTLVQLS 62 Query 61 APGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRY 120 CAPC R + V VAH+E+D+ P+ A VL PTT+ FD GR+ Sbjct 63 TTFCAPCRHARAVLARVAETTDGVAHVELDITDRPEVAEALRVLRTPTTIAFDPTGRELL 122 Query 121 RTSGVPKAADLRSALKP 137 R SGVPK A LR+AL P Sbjct 123 RISGVPKPATLRTALAP 139 >gi|269124863|ref|YP_003298233.1| hypothetical protein Tcur_0600 [Thermomonospora curvata DSM 43183] gi|268309821|gb|ACY96195.1| hypothetical protein Tcur_0600 [Thermomonospora curvata DSM 43183] Length=143 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/96 (41%), Positives = 55/96 (58%), Gaps = 1/96 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 AELG + G T+V F CAPC RR + +V A + VAHIE+D +S+ RR V Sbjct 47 AELGAALGERATLVQFSTAFCAPCRATRRVLAEVAAMVEGVAHIEIDAESHLDLVRRLGV 106 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLL 139 + PT L+ D G R R +G P+ AD+ +AL ++ Sbjct 107 VRTPTVLVLDAAGNVRRRATGAPRKADVIAALGAVI 142 >gi|290962560|ref|YP_003493742.1| thioredoxin [Streptomyces scabiei 87.22] gi|260652086|emb|CBG75218.1| putative thioredoxin [Streptomyces scabiei 87.22] Length=128 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 39/92 (43%), Positives = 53/92 (58%), Gaps = 1/92 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 AELG G T+V F + CAPC RR + +V A + VAH+E+D + + RR + Sbjct 33 AELGEGLGERATLVQFSSAFCAPCRATRRVLAEVAAMVPGVAHVEIDAEEHLDLVRRLDI 92 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 L PT L+ D DGR R SG P+ AD+ +AL Sbjct 93 LKTPTVLVLDADGRIVRRASGQPRRADVIAAL 124 >gi|297197815|ref|ZP_06915212.1| thioredoxin [Streptomyces sviceus ATCC 29083] gi|297146877|gb|EDY60630.2| thioredoxin [Streptomyces sviceus ATCC 29083] Length=137 Score = 67.4 bits (163), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/92 (41%), Positives = 52/92 (57%), Gaps = 1/92 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 AELG G T+V F + CAPC RR +G+V + VAH+E+D + N R + Sbjct 42 AELGEDLGERATLVQFSSAFCAPCRATRRVLGEVAGLVPGVAHVEIDAEKNLDLVRALDI 101 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 L PT L+ D DGR R +G P+ AD+ +A+ Sbjct 102 LKTPTVLVLDADGRVVRRATGQPRKADVIAAI 133 >gi|134103527|ref|YP_001109188.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|291008370|ref|ZP_06566343.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] gi|133916150|emb|CAM06263.1| thioredoxin [Saccharopolyspora erythraea NRRL 2338] Length=146 Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/86 (40%), Positives = 48/86 (56%), Gaps = 0/86 (0%) Query 55 TVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDV 114 T++ F CAPC R + D V H+EVDL +P+ + V PTTL+ D Sbjct 61 TLLQFSTTFCAPCRHTRILLADFAGRTEGVRHVEVDLTDHPEWSTPLGVHRTPTTLVLDG 120 Query 115 DGRQRYRTSGVPKAADLRSALKPLLA 140 GR+ +R GVP+ +L +AL+PLLA Sbjct 121 AGREVFRVGGVPRRDELDAALRPLLA 146 >gi|311895113|dbj|BAJ27521.1| putative thioredoxin [Kitasatospora setae KM-6054] Length=140 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 51/140 (37%), Positives = 69/140 (50%), Gaps = 9/140 (6%) Query 1 MTTMIVASV---ATGALATIARWLLTRRSVILREVGPETTPAAPART-AELGLS-GAGPT 55 MT +IV V A GA ++ + R LR G + A T AELG G T Sbjct 1 MTGLIVCLVVLAAAGAFGSVRKA----RDGRLRVRGEDGADGAVRLTGAELGEPLGERAT 56 Query 56 VVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVD 115 +V F C PC RR + +V + VAH+EVD +S + RR +L PT L+ D Sbjct 57 LVQFSTSFCQPCRATRRTLAEVAGMVEGVAHVEVDAESQLELVRRLEILRTPTVLVLDAS 116 Query 116 GRQRYRTSGVPKAADLRSAL 135 GR R +G P+ AD+ +AL Sbjct 117 GRVVRRAAGQPRKADVIAAL 136 >gi|311743222|ref|ZP_07717029.1| ThiX protein [Aeromicrobium marinum DSM 15272] gi|311313290|gb|EFQ83200.1| ThiX protein [Aeromicrobium marinum DSM 15272] Length=150 Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 47/139 (34%), Positives = 69/139 (50%), Gaps = 11/139 (7%) Query 4 MIVASVATGALATIARWLLTRRSVILREVGPETTPAAPARTAEL-------GLSGAGPTV 56 + VA V T ALA + R RR+ REV P + + A T E G G+ ++ Sbjct 7 LAVAIVVTFALALLMR----RRNGRFREVAPPRSAPSEAMTGERLTAAEIGGELGSRVSL 62 Query 57 VHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDG 116 V F + C+PC R + DV A DV H+E+D +++ RR +L PT L+ D G Sbjct 63 VQFSSAFCSPCRATRALLHDVVAGRSDVRHVEIDAEAHLDLVRRLGILRTPTVLVLDGSG 122 Query 117 RQRYRTSGVPKAADLRSAL 135 R R SG+P + +A+ Sbjct 123 RVVGRASGLPSRDQVEAAI 141 >gi|291441112|ref|ZP_06580502.1| thioredoxin [Streptomyces ghanaensis ATCC 14672] gi|291344007|gb|EFE70963.1| thioredoxin [Streptomyces ghanaensis ATCC 14672] Length=132 Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 37/92 (41%), Positives = 51/92 (56%), Gaps = 1/92 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 AELG G T+V F + CAPC RR + DV + VAH+E+D ++ RR + Sbjct 30 AELGARLGERATLVQFSSAFCAPCRATRRVLADVAGMVPGVAHVEIDAEARLDLVRRLEI 89 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 L PT L+ D GR R +G P+ AD+ +AL Sbjct 90 LKTPTVLVLDAGGRVVRRAAGQPRKADVIAAL 121 >gi|302531006|ref|ZP_07283348.1| thioredoxin [Streptomyces sp. AA4] gi|302439901|gb|EFL11717.1| thioredoxin [Streptomyces sp. AA4] Length=134 Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 44/128 (35%), Positives = 63/128 (50%), Gaps = 1/128 (0%) Query 14 LATIARWLLTRRSVILREVGPET-TPAAPARTAELGLSGAGPTVVHFRAPGCAPCDRVRR 72 +AT A +L R+ +R P T PA AE + T+V C PC R Sbjct 3 VATAAGLVLRARNGRIRAAKPAAATRPLPAPVAEALDPQSAVTLVQISTTFCTPCRHTRA 62 Query 73 GVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLR 132 + + + H+++D+ P+ A+ SVLS PTTL D +GR+ R GVPK +L Sbjct 63 ILSSLAEKTDGLHHVDLDVTERPEVAQALSVLSTPTTLALDPEGRELLRVGGVPKCPELL 122 Query 133 SALKPLLA 140 AL+P LA Sbjct 123 EALRPHLA 130 >gi|21219599|ref|NP_625378.1| thioredoxin [Streptomyces coelicolor A3(2)] gi|289773213|ref|ZP_06532591.1| thioredoxin [Streptomyces lividans TK24] gi|8744977|emb|CAB95303.1| putative thioredoxin [Streptomyces coelicolor A3(2)] gi|289703412|gb|EFD70841.1| thioredoxin [Streptomyces lividans TK24] Length=126 Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 37/92 (41%), Positives = 53/92 (58%), Gaps = 1/92 (1%) Query 45 AELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSV 103 A+LG G T+V F + CAPC RR +G+V + VAH+E+D + + + R V Sbjct 31 ADLGAELGPRATLVQFSSAFCAPCRATRRVLGEVAGLVPGVAHVEIDAEGHLELVRALDV 90 Query 104 LSLPTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 L PT L+ D DGR R +G P+ AD+ +AL Sbjct 91 LKTPTVLVLDADGRVVRRATGQPRRADVIAAL 122 >gi|302867772|ref|YP_003836409.1| thioredoxin domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315505825|ref|YP_004084712.1| thioredoxin domain-containing protein [Micromonospora sp. L5] gi|302570631|gb|ADL46833.1| Thioredoxin domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|315412444|gb|ADU10561.1| Thioredoxin domain-containing protein [Micromonospora sp. L5] Length=160 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 39/89 (44%), Positives = 49/89 (56%), Gaps = 0/89 (0%) Query 47 LGLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSL 106 LG+ T+V F AP CAPC RR + DV A L +A +EV +D + AAR V Sbjct 66 LGVRPGEVTLVQFSAPVCAPCRAARRVLADVAARLDGIAVLEVGVDEHLDAARELDVWRT 125 Query 107 PTTLIFDVDGRQRYRTSGVPKAADLRSAL 135 PT L+ D GR R +GVP DL +AL Sbjct 126 PTVLVVDAAGRVVRRAAGVPDRDDLIAAL 154 >gi|284028953|ref|YP_003378884.1| hypothetical protein Kfla_0980 [Kribbella flavida DSM 17836] gi|283808246|gb|ADB30085.1| hypothetical protein Kfla_0980 [Kribbella flavida DSM 17836] Length=153 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 43/138 (32%), Positives = 72/138 (53%), Gaps = 6/138 (4%) Query 4 MIVASVATGALATIAR-WLLTR----RSVILREVGPETTPAAPARTAELGLS-GAGPTVV 57 ++VA++A G L ++ + W R R + R V PA ++G G T++ Sbjct 7 VLVAALAAGVLLSVLKTWYDGRFRATRVIEGRAVDETERPADRVTAEDIGAELGERATLL 66 Query 58 HFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDVDGR 117 F + CAPC RR + +V + + V H+E+D +S+ + RR +++ PT L+ D G Sbjct 67 QFSSAFCAPCRATRRVLAEVESMVDGVRHVEIDAESHLELVRRLNIMRTPTVLVLDAAGG 126 Query 118 QRYRTSGVPKAADLRSAL 135 R SG P+ AD+ +AL Sbjct 127 TVTRASGQPRKADVIAAL 144 >gi|90194297|gb|ABD92692.1| putative thioredoxin [Amycolatopsis mediterranei] Length=130 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/85 (36%), Positives = 47/85 (56%), Gaps = 0/85 (0%) Query 55 TVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDV 114 T+V CAPC + +G + + H+E+D+ + P+ A+ +VL PTT+ Sbjct 41 TLVQISTTFCAPCRHAKAVLGPLAERTDGLHHVELDVTNQPEVAQSLAVLRTPTTIALTP 100 Query 115 DGRQRYRTSGVPKAADLRSALKPLL 139 DGR+ R GVPK +L +AL+P L Sbjct 101 DGRELLRVGGVPKGPELLAALRPYL 125 >gi|300790811|ref|YP_003771102.1| thioredoxin [Amycolatopsis mediterranei U32] gi|299800325|gb|ADJ50700.1| thioredoxin [Amycolatopsis mediterranei U32] gi|340532503|gb|AEK47708.1| thioredoxin [Amycolatopsis mediterranei S699] Length=141 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/85 (36%), Positives = 47/85 (56%), Gaps = 0/85 (0%) Query 55 TVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLPTTLIFDV 114 T+V CAPC + +G + + H+E+D+ + P+ A+ +VL PTT+ Sbjct 52 TLVQISTTFCAPCRHAKAVLGPLAERTDGLHHVELDVTNQPEVAQSLAVLRTPTTIALTP 111 Query 115 DGRQRYRTSGVPKAADLRSALKPLL 139 DGR+ R GVPK +L +AL+P L Sbjct 112 DGRELLRVGGVPKGPELLAALRPYL 136 >gi|126348342|emb|CAJ90064.1| putative thioredoxin [Streptomyces ambofaciens ATCC 23877] Length=188 Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 35/88 (40%), Positives = 49/88 (56%), Gaps = 0/88 (0%) Query 48 GLSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNPQAARRFSVLSLP 107 G GA T+V F + CAPC RR +G+V + V H+E+D ++ + R VL P Sbjct 97 GELGARATLVQFSSAFCAPCRATRRILGEVAGMVPGVRHVEIDAEARLELVRALGVLKTP 156 Query 108 TTLIFDVDGRQRYRTSGVPKAADLRSAL 135 T L+ D DGR R G P+ AD+ +AL Sbjct 157 TVLVLDADGRVVRRAVGQPRKADVIAAL 184 >gi|182440314|ref|YP_001828033.1| putative thioredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|326780981|ref|ZP_08240246.1| putative thioredoxin [Streptomyces cf. griseus XylebKG-1] gi|178468830|dbj|BAG23350.1| putative thioredoxin [Streptomyces griseus subsp. griseus NBRC 13350] gi|326661314|gb|EGE46160.1| putative thioredoxin [Streptomyces griseus XylebKG-1] Length=108 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/104 (35%), Positives = 52/104 (50%), Gaps = 1/104 (0%) Query 37 TPAAPARTAELGLS-GAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHIEVDLDSNP 95 TP ++LG G T+V F + C PC RR +G+V + VAH+EVD +S+ Sbjct 5 TPGQRLDASQLGAELGKRATLVQFSSAFCQPCRATRRTLGEVAGMVDGVAHVEVDAESHL 64 Query 96 QAARRFSVLSLPTTLIFDVDGRQRYRTSGVPKAADLRSALKPLL 139 R + PT L+ D +G R SG P+ D+ +AL L Sbjct 65 ALVRELDITKTPTVLVLDAEGEVVRRASGQPRTVDVVAALAHAL 108 >gi|310643791|ref|YP_003948549.1| thioredoxin [Paenibacillus polymyxa SC2] gi|309248741|gb|ADO58308.1| Thioredoxin [Paenibacillus polymyxa SC2] Length=105 Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 31/88 (36%), Positives = 51/88 (58%), Gaps = 2/88 (2%) Query 49 LSGAGPTVVHFRAPGCAPCDRVRRGVGDVCADLGDVAHI-EVDLDSNPQAARRFSVLSLP 107 + G G +V F AP C PC + + D+ ++GD I +V++D NP++A RF V+S+P Sbjct 15 VEGTGTVLVDFWAPWCGPCKMIAPILEDLSTEVGDSVKIAKVNVDENPESASRFGVMSIP 74 Query 108 TTLIFDVDGRQRYRTSGVPKAADLRSAL 135 T ++F DG+ + G+ L+S L Sbjct 75 TLIVFK-DGQPVDKVVGLNSKEALKSML 101 Lambda K H 0.322 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 130895291376 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40