BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0817c
Length=270
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607957|ref|NP_215332.1| hypothetical protein Rv0817c [Mycob... 540 7e-152
gi|289756904|ref|ZP_06516282.1| conserved hypothetical protein [... 540 1e-151
gi|289744541|ref|ZP_06503919.1| conserved hypothetical protein [... 538 4e-151
gi|254549789|ref|ZP_05140236.1| hypothetical protein Mtube_04886... 536 2e-150
gi|340625832|ref|YP_004744284.1| hypothetical protein MCAN_08201... 531 5e-149
gi|183984834|ref|YP_001853125.1| hypothetical protein MMAR_4866 ... 413 2e-113
gi|118616283|ref|YP_904615.1| hypothetical protein MUL_0434 [Myc... 410 1e-112
gi|15828174|ref|NP_302437.1| hypothetical protein ML2195 [Mycoba... 404 8e-111
gi|240173185|ref|ZP_04751843.1| hypothetical protein MkanA1_2798... 400 9e-110
gi|118464675|ref|YP_880034.1| hypothetical protein MAV_0759 [Myc... 387 8e-106
gi|41406746|ref|NP_959582.1| hypothetical protein MAP0648c [Myco... 387 1e-105
gi|254773699|ref|ZP_05215215.1| hypothetical protein MaviaA2_033... 384 6e-105
gi|254821034|ref|ZP_05226035.1| hypothetical protein MintA_13952... 382 4e-104
gi|342860294|ref|ZP_08716945.1| hypothetical protein MCOL_15506 ... 377 1e-102
gi|296166425|ref|ZP_06848857.1| conserved hypothetical protein [... 373 2e-101
gi|339293833|gb|AEJ45944.1| hypothetical protein CCDC5079_0754 [... 362 3e-98
gi|333992182|ref|YP_004524796.1| hypothetical protein JDM601_354... 317 1e-84
gi|145222241|ref|YP_001132919.1| hypothetical protein Mflv_1649 ... 314 1e-83
gi|169627844|ref|YP_001701493.1| hypothetical protein MAB_0743c ... 311 9e-83
gi|120406046|ref|YP_955875.1| hypothetical protein Mvan_5098 [My... 303 1e-80
gi|108801489|ref|YP_641686.1| hypothetical protein Mmcs_4526 [My... 303 2e-80
gi|118468523|ref|YP_890013.1| hypothetical protein MSMEG_5785 [M... 301 7e-80
gi|226364351|ref|YP_002782133.1| hypothetical protein ROP_49410 ... 134 2e-29
gi|111021830|ref|YP_704802.1| hypothetical protein RHA1_ro04859 ... 132 7e-29
gi|312138322|ref|YP_004005658.1| hypothetical protein REQ_08590 ... 129 5e-28
gi|226308294|ref|YP_002768254.1| hypothetical protein RER_48070 ... 120 2e-25
gi|333918418|ref|YP_004491999.1| hypothetical protein AS9A_0746 ... 115 8e-24
gi|317509395|ref|ZP_07967014.1| hypothetical protein HMPREF9336_... 108 1e-21
gi|296395420|ref|YP_003660304.1| hypothetical protein Srot_3049 ... 103 3e-20
gi|54022564|ref|YP_116806.1| hypothetical protein nfa5970 [Nocar... 101 1e-19
gi|296141221|ref|YP_003648464.1| hypothetical protein Tpau_3546 ... 94.7 1e-17
gi|343926096|ref|ZP_08765608.1| hypothetical protein GOALK_053_0... 89.7 4e-16
gi|262203795|ref|YP_003275003.1| hypothetical protein Gbro_3936 ... 86.3 4e-15
gi|237785012|ref|YP_002905717.1| hypothetical protein ckrop_0395... 73.6 3e-11
gi|134103526|ref|YP_001109187.1| hypothetical protein SACE_7103 ... 71.6 1e-10
gi|213966470|ref|ZP_03394644.1| putative secreted protein [Coryn... 68.2 1e-09
gi|257057707|ref|YP_003135539.1| hypothetical protein Svir_37680... 65.9 6e-09
gi|326384906|ref|ZP_08206581.1| hypothetical protein SCNU_18272 ... 65.1 1e-08
gi|300859132|ref|YP_003784115.1| hypothetical protein cpfrc_0171... 63.9 2e-08
gi|334563923|ref|ZP_08516914.1| putative secreted protein [Coryn... 62.4 8e-08
gi|308277078|gb|ADO26977.1| Putative secreted protein [Corynebac... 60.5 3e-07
gi|336324674|ref|YP_004604640.1| hypothetical protein CRES_0113 ... 59.3 6e-07
gi|172041290|ref|YP_001801004.1| putative secreted protein [Cory... 58.9 9e-07
gi|337291494|ref|YP_004630515.1| hypothetical protein CULC22_018... 56.2 5e-06
gi|334697519|gb|AEG82316.1| putative secreted protein [Corynebac... 55.5 8e-06
gi|227833980|ref|YP_002835687.1| putative secreted protein [Cory... 54.3 2e-05
gi|68535440|ref|YP_250145.1| putative secreted protein [Coryneba... 53.9 2e-05
gi|260578348|ref|ZP_05846263.1| secreted protein [Corynebacteriu... 53.9 2e-05
gi|296118893|ref|ZP_06837466.1| putative secreted protein [Coryn... 52.8 5e-05
gi|256380807|ref|YP_003104467.1| hypothetical protein Amir_6825 ... 50.8 2e-04
>gi|15607957|ref|NP_215332.1| hypothetical protein Rv0817c [Mycobacterium tuberculosis H37Rv]
gi|15840230|ref|NP_335267.1| hypothetical protein MT0839 [Mycobacterium tuberculosis CDC1551]
gi|31792005|ref|NP_854498.1| hypothetical protein Mb0840c [Mycobacterium bovis AF2122/97]
46 more sequence titles
Length=270
Score = 540 bits (1392), Expect = 7e-152, Method: Compositional matrix adjust.
Identities = 270/270 (100%), Positives = 270/270 (100%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF
Sbjct 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES
Sbjct 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV
Sbjct 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV
Sbjct 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSDVIIEGITRGVTISLDEFKQS
Sbjct 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
>gi|289756904|ref|ZP_06516282.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289712468|gb|EFD76480.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=270
Score = 540 bits (1390), Expect = 1e-151, Method: Compositional matrix adjust.
Identities = 269/270 (99%), Positives = 269/270 (99%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTT RKAANLRSDPFVAILRF
Sbjct 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTARKAANLRSDPFVAILRF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES
Sbjct 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV
Sbjct 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV
Sbjct 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSDVIIEGITRGVTISLDEFKQS
Sbjct 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
>gi|289744541|ref|ZP_06503919.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289685069|gb|EFD52557.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=270
Score = 538 bits (1386), Expect = 4e-151, Method: Compositional matrix adjust.
Identities = 269/270 (99%), Positives = 269/270 (99%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF
Sbjct 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIR DAKLPVGELES
Sbjct 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRSDAKLPVGELES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV
Sbjct 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV
Sbjct 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSDVIIEGITRGVTISLDEFKQS
Sbjct 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
>gi|254549789|ref|ZP_05140236.1| hypothetical protein Mtube_04886 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|306774941|ref|ZP_07413278.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu001]
gi|306787847|ref|ZP_07426169.1| hypothetical exported protein [Mycobacterium tuberculosis SUMu004]
24 more sequence titles
Length=268
Score = 536 bits (1380), Expect = 2e-150, Method: Compositional matrix adjust.
Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF
Sbjct 1 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 60
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI
Sbjct 61 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 120
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV
Sbjct 121 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 180
Query 183 LVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPN 242
LVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPN
Sbjct 181 LVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPN 240
Query 243 TVGARGSDVIIEGITRGVTISLDEFKQS 270
TVGARGSDVIIEGITRGVTISLDEFKQS
Sbjct 241 TVGARGSDVIIEGITRGVTISLDEFKQS 268
>gi|340625832|ref|YP_004744284.1| hypothetical protein MCAN_08201 [Mycobacterium canettii CIPT
140010059]
gi|340004022|emb|CCC43158.1| putative conserved exported protein [Mycobacterium canettii CIPT
140010059]
Length=270
Score = 531 bits (1367), Expect = 5e-149, Method: Compositional matrix adjust.
Identities = 265/270 (99%), Positives = 266/270 (99%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
MPMRKVLV VTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF
Sbjct 1 MPMRKVLVAVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMREHYAELEIKAFAVEHAG GTATLEATMHSIDLSYASWLIR DAKLPVGELES
Sbjct 61 PFIPQAMREHYAELEIKAFAVEHAGVGTATLEATMHSIDLSYASWLIRADAKLPVGELES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISG+RGLVFSGTP SANFAHRV
Sbjct 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGNRGLVFSGTPTSANFAHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV
Sbjct 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSDVIIEGITRGVTISLDEFKQS
Sbjct 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
>gi|183984834|ref|YP_001853125.1| hypothetical protein MMAR_4866 [Mycobacterium marinum M]
gi|183178160|gb|ACC43270.1| conserved protein [Mycobacterium marinum M]
Length=270
Score = 413 bits (1061), Expect = 2e-113, Method: Compositional matrix adjust.
Identities = 209/270 (78%), Positives = 232/270 (86%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M MRKVLVG+T AIV+ ++I+GAVG DFGASIYAEYRLST+VRKAA+L SDPFVAIL F
Sbjct 1 MRMRKVLVGLTATAIVLGIVILGAVGVDFGASIYAEYRLSTSVRKAAHLGSDPFVAILGF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR Y ELEIKA AVEHA G ATLEATMHSIDLS ASWLI P++++ V +LES
Sbjct 61 PFIPQAMRHRYFELEIKAIAVEHAVVGVATLEATMHSIDLSQASWLIEPNSRMTVHKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGR+LGISDLMV AP QESNDATGGTTESGIS GLV SGTP SA+F HRV
Sbjct 121 RIIIDSMHLGRHLGISDLMVQAPPQESNDATGGTTESGISDGHGLVLSGTPTSADFDHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VD+S+A +D++TLVITPT VVTGPDTADQ VPDDK AVL AF+S+LPNQKLPF V
Sbjct 181 SVSVDVSIAPEDQSTLVITPTRVVTGPDTADQTVPDDKLGAVLRAFSSRLPNQKLPFAVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSD+IIEGIT VTISL+ FKQS
Sbjct 241 PNTVGARGSDIIIEGITNDVTISLEGFKQS 270
>gi|118616283|ref|YP_904615.1| hypothetical protein MUL_0434 [Mycobacterium ulcerans Agy99]
gi|118568393|gb|ABL03144.1| conserved protein [Mycobacterium ulcerans Agy99]
Length=270
Score = 410 bits (1053), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 208/270 (78%), Positives = 231/270 (86%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M MRKVLVG+T AIV+ ++I+GAVG DFGASIYAEYRLST+VRKAA+L SDPFVAIL F
Sbjct 1 MRMRKVLVGLTATAIVLGIVILGAVGIDFGASIYAEYRLSTSVRKAAHLGSDPFVAILGF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR Y ELEIKA AVEHA G ATLEATMHSIDLS ASWLI P++++ V +LES
Sbjct 61 PFIPQAMRHRYFELEIKAIAVEHAVVGVATLEATMHSIDLSQASWLIEPNSRMTVHKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLGR+LGISDLMV AP QESNDATGGTTESGIS GLV SGTP SA+F RV
Sbjct 121 RIIIDSMHLGRHLGISDLMVQAPPQESNDATGGTTESGISDGHGLVLSGTPTSADFDQRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VD+S+A +D++TLVITPT VVTGPDTADQ VPDDK AVL AF+S+LPNQKLPF V
Sbjct 181 SVSVDVSIAPEDQSTLVITPTRVVTGPDTADQTVPDDKLGAVLRAFSSRLPNQKLPFAVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
PNTVGARGSD+IIEGIT VTISL+ FKQS
Sbjct 241 PNTVGARGSDIIIEGITNDVTISLEGFKQS 270
>gi|15828174|ref|NP_302437.1| hypothetical protein ML2195 [Mycobacterium leprae TN]
gi|221230651|ref|YP_002504067.1| hypothetical protein MLBr_02195 [Mycobacterium leprae Br4923]
gi|699205|gb|AAA62969.1| u2266m [Mycobacterium leprae]
gi|13093728|emb|CAC31150.1| probable exported protein [Mycobacterium leprae]
gi|219933758|emb|CAR72292.1| probable exported protein [Mycobacterium leprae Br4923]
Length=283
Score = 404 bits (1038), Expect = 8e-111, Method: Compositional matrix adjust.
Identities = 197/270 (73%), Positives = 227/270 (85%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M MRKVL V + +AVL+VG +G D+G SIYAEY LS VR AANL SDPFVAIL F
Sbjct 14 MRMRKVLTSVIATVVTMAVLVVGVLGIDYGTSIYAEYLLSVNVRNAANLGSDPFVAILAF 73
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR+HY ELEIKA AV+HA G A+LEATM+SIDL+YASWLI+PDAKLPV LES
Sbjct 74 PFIPQAMRDHYTELEIKANAVDHAMVGKASLEATMYSIDLTYASWLIKPDAKLPVDRLES 133
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDSMHLG+YLGISDLMV AP +E+N+ATGGTTESGIS GLV SGTP SANF HRV
Sbjct 134 RIIIDSMHLGQYLGISDLMVEAPHRETNNATGGTTESGISSGHGLVLSGTPKSANFDHRV 193
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SVLVDLS+A +D+ATLV TPT + TGPDTA+QPVPDDKR+ VL AF++++ +Q+LPFGV
Sbjct 194 SVLVDLSIAPEDQATLVFTPTGIATGPDTANQPVPDDKRNPVLRAFSARMSDQRLPFGVA 253
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P + GARGSDVIIEGIT+GVTI+LD FKQS
Sbjct 254 PTSEGARGSDVIIEGITQGVTITLDGFKQS 283
>gi|240173185|ref|ZP_04751843.1| hypothetical protein MkanA1_27981 [Mycobacterium kansasii ATCC
12478]
Length=264
Score = 400 bits (1028), Expect = 9e-110, Method: Compositional matrix adjust.
Identities = 198/243 (82%), Positives = 217/243 (90%), Gaps = 0/243 (0%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSG 87
DFGASIYAEYRLST+VRKAANL SDPFVAIL FPFIPQAMR+ Y ELEIKA+A+EH+ G
Sbjct 22 DFGASIYAEYRLSTSVRKAANLGSDPFVAILGFPFIPQAMRDRYGELEIKAYAIEHSTVG 81
Query 88 TATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQES 147
TATLEATMHSIDLS+ASWLI+PDA+L V ELESRIIIDSMHLGRYLG++DLMV AP QES
Sbjct 82 TATLEATMHSIDLSHASWLIQPDARLSVHELESRIIIDSMHLGRYLGMADLMVQAPLQES 141
Query 148 NDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGP 207
NDATGGTTESGISGS GLVFSGTP SA+F RVSV VDLS+ + TLVITPT VVTGP
Sbjct 142 NDATGGTTESGISGSHGLVFSGTPKSADFDRRVSVAVDLSIDPHSQETLVITPTGVVTGP 201
Query 208 DTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
DTADQPVPDDKR+AVLHAF+S+LPNQKLPFGV PNTVGARGSDVIIEGIT VT++L F
Sbjct 202 DTADQPVPDDKREAVLHAFSSRLPNQKLPFGVAPNTVGARGSDVIIEGITYDVTVALTGF 261
Query 268 KQS 270
+QS
Sbjct 262 RQS 264
>gi|118464675|ref|YP_880034.1| hypothetical protein MAV_0759 [Mycobacterium avium 104]
gi|118165962|gb|ABK66859.1| conserved hypothetical protein [Mycobacterium avium 104]
gi|336458334|gb|EGO37313.1| hypothetical protein MAPs_14370 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=270
Score = 387 bits (994), Expect = 8e-106, Method: Compositional matrix adjust.
Identities = 193/270 (72%), Positives = 226/270 (84%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RKVL+GV AI+VAV+ +GA+G D+G SIYAEYRLS++VR+AA+L +DPFVAI+ F
Sbjct 1 MRVRKVLIGVAATAILVAVVALGAIGVDYGTSIYAEYRLSSSVRRAADLGTDPFVAIVAF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PF+PQA+R +Y +LEIKA AV HA +G ATLEATM+S+DL+ ASWLI PDAKL V +LES
Sbjct 61 PFLPQALRGNYNQLEIKANAVSHAMTGKATLEATMYSVDLAQASWLIAPDAKLAVRKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDS HLGRYL ISDLMV AP +E+N ATGG T SGISGS GLVF+GTP SA F HRV
Sbjct 121 RIIIDSTHLGRYLNISDLMVEAPPKETNTATGGITASGISGSHGLVFTGTPKSAGFDHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD ATLV TPT V+TG DTADQ VP DK DAVLHAF+ +LPNQ+LPFGV
Sbjct 181 SVSVDLSIAPDDPATLVFTPTGVLTGSDTADQSVPADKHDAVLHAFSGRLPNQRLPFGVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGIT GVT++L+EFKQS
Sbjct 241 PTTEGARGSDVIIEGITYGVTVTLEEFKQS 270
>gi|41406746|ref|NP_959582.1| hypothetical protein MAP0648c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395096|gb|AAS02965.1| hypothetical protein MAP_0648c [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=289
Score = 387 bits (993), Expect = 1e-105, Method: Compositional matrix adjust.
Identities = 193/270 (72%), Positives = 226/270 (84%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RKVL+GV AI+VAV+ +GA+G D+G SIYAEYRLS++VR+AA+L +DPFVAI+ F
Sbjct 20 MRVRKVLIGVAATAILVAVVALGAIGVDYGTSIYAEYRLSSSVRRAADLGTDPFVAIVAF 79
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PF+PQA+R +Y +LEIKA AV HA +G ATLEATM+S+DL+ ASWLI PDAKL V +LES
Sbjct 80 PFLPQALRGNYNQLEIKANAVSHAMTGKATLEATMYSVDLAQASWLIAPDAKLAVRKLES 139
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDS HLGRYL ISDLMV AP +E+N ATGG T SGISGS GLVF+GTP SA F HRV
Sbjct 140 RIIIDSTHLGRYLNISDLMVEAPPKETNTATGGITASGISGSHGLVFTGTPKSAGFDHRV 199
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD ATLV TPT V+TG DTADQ VP DK DAVLHAF+ +LPNQ+LPFGV
Sbjct 200 SVSVDLSIAPDDPATLVFTPTGVLTGSDTADQSVPADKHDAVLHAFSGRLPNQRLPFGVA 259
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGIT GVT++L+EFKQS
Sbjct 260 PTTEGARGSDVIIEGITYGVTVTLEEFKQS 289
>gi|254773699|ref|ZP_05215215.1| hypothetical protein MaviaA2_03352 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=270
Score = 384 bits (987), Expect = 6e-105, Method: Compositional matrix adjust.
Identities = 192/270 (72%), Positives = 225/270 (84%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RKVL+GV AI+VAV+ +GA+G D+G SIYAEYRLS++VR+AA+L +DPFVAI+ F
Sbjct 1 MRVRKVLIGVAATAILVAVVALGAIGVDYGTSIYAEYRLSSSVRRAADLGTDPFVAIVAF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PF+PQA+R +Y +LEIKA AV HA +G ATLEATM+S+DL+ ASWLI PDAKL V +LES
Sbjct 61 PFLPQALRGNYNQLEIKATAVSHAMTGKATLEATMYSVDLAQASWLIAPDAKLAVRKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDS HLGRYL ISDLMV AP +E+N ATGG T SGISGS GLVF+GTP SA F HRV
Sbjct 121 RIIIDSTHLGRYLNISDLMVEAPPKETNTATGGITASGISGSHGLVFTGTPKSAGFDHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD ATLV TPT V+TG DTADQ VP DK DAVLHAF+ +LPNQ+LPFGV
Sbjct 181 SVSVDLSIAPDDPATLVFTPTGVLTGSDTADQSVPADKHDAVLHAFSGRLPNQRLPFGVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGIT GVT++L+ FKQS
Sbjct 241 PTTEGARGSDVIIEGITYGVTVTLEGFKQS 270
>gi|254821034|ref|ZP_05226035.1| hypothetical protein MintA_13952 [Mycobacterium intracellulare
ATCC 13950]
Length=270
Score = 382 bits (980), Expect = 4e-104, Method: Compositional matrix adjust.
Identities = 194/270 (72%), Positives = 224/270 (83%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RKVL+ VT AI++AV+ +GA+G D+G SIYAEYRLS +VRKAANL SDPFVAI+ F
Sbjct 1 MRVRKVLIAVTATAILLAVVALGAIGVDYGTSIYAEYRLSASVRKAANLGSDPFVAIVAF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR +Y ++EIKA AVEHA +G ATLEATM+S+DL+ ASWLI DAKL V +LES
Sbjct 61 PFIPQAMRGNYDQVEIKANAVEHAMTGKATLEATMYSVDLARASWLITRDAKLAVHKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDS HLGRYLGISDLMV AP +E+N +TGG T SGIS S GLVF+GTP S+ F HRV
Sbjct 121 RIIIDSTHLGRYLGISDLMVEAPPKETNTSTGGVTASGISDSHGLVFTGTPKSSGFDHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD ATLV TPT V+TGPDTADQ VP DK AVLHAFA +LP+Q+LPFGV
Sbjct 181 SVSVDLSIAPDDPATLVFTPTGVLTGPDTADQTVPADKHYAVLHAFAGRLPDQRLPFGVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGIT GVT+SLD FK+S
Sbjct 241 PTTEGARGSDVIIEGITYGVTVSLDGFKRS 270
>gi|342860294|ref|ZP_08716945.1| hypothetical protein MCOL_15506 [Mycobacterium colombiense CECT
3035]
gi|342131949|gb|EGT85190.1| hypothetical protein MCOL_15506 [Mycobacterium colombiense CECT
3035]
Length=270
Score = 377 bits (967), Expect = 1e-102, Method: Compositional matrix adjust.
Identities = 188/270 (70%), Positives = 225/270 (84%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RKVL+ VT AI+VAVL +GA+G D+G SIYAEYRLS++VRKAA L +DPFVAI+ F
Sbjct 1 MRVRKVLIAVTATAILVAVLALGAIGFDYGTSIYAEYRLSSSVRKAAKLGTDPFVAIVAF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR +Y+++EIKA AV+H+ +G ATLEATM+S+DL+ ASWLI PDAKL V +LES
Sbjct 61 PFIPQAMRGNYSQVEIKANAVDHSMTGRATLEATMYSVDLAQASWLISPDAKLWVSKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RII+DS HLGR++GISDLMV AP +E+N +TGG T SGIS S GLVF+GTP SA F RV
Sbjct 121 RIIVDSTHLGRFMGISDLMVEAPPKETNTSTGGVTASGISDSHGLVFTGTPKSAGFDRRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD ATLV TPT V+TG DTA+Q VP DKRDAVL AF+ +LP+Q+LPFGV
Sbjct 181 SVSVDLSIAPDDPATLVFTPTGVLTGSDTANQTVPADKRDAVLRAFSGRLPDQRLPFGVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGITRGVT++L FKQS
Sbjct 241 PTTEGARGSDVIIEGITRGVTVTLQGFKQS 270
>gi|296166425|ref|ZP_06848857.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898186|gb|EFG77760.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=270
Score = 373 bits (958), Expect = 2e-101, Method: Compositional matrix adjust.
Identities = 196/270 (73%), Positives = 226/270 (84%), Gaps = 0/270 (0%)
Query 1 MPMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRF 60
M +RK+L+ V A I VAVL +GAV D+G+SIYAEYRLS +VRK A L+SDPFVAI+ F
Sbjct 1 MRVRKMLIAVAAAVIAVAVLALGAVAVDYGSSIYAEYRLSGSVRKVAGLKSDPFVAIVAF 60
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
PFIPQAMR Y ++EIKA AV+HA G ATLEATM+S+DLS +SWLI P A+LPVG+LES
Sbjct 61 PFIPQAMRGRYNQVEIKANAVDHATVGKATLEATMYSVDLSRSSWLIGPTAELPVGKLES 120
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
RIIIDS HLGRYLGISDLMV AP +E+N ATGG T SGIS S GLVFSGTP SANF HRV
Sbjct 121 RIIIDSTHLGRYLGISDLMVEAPPRETNTATGGVTASGISDSHGLVFSGTPHSANFEHRV 180
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVV 240
SV VDLS+A DD+ATLVITPT V+TG DTADQ VPDD+R+AVLHAFA+++PNQ+LPFGV
Sbjct 181 SVSVDLSIAPDDQATLVITPTGVLTGADTADQAVPDDRREAVLHAFATRVPNQRLPFGVA 240
Query 241 PNTVGARGSDVIIEGITRGVTISLDEFKQS 270
P T GARGSDVIIEGI+ GVT+ LD FKQS
Sbjct 241 PKTEGARGSDVIIEGISYGVTVDLDRFKQS 270
>gi|339293833|gb|AEJ45944.1| hypothetical protein CCDC5079_0754 [Mycobacterium tuberculosis
CCDC5079]
Length=201
Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF
Sbjct 1 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 60
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI
Sbjct 61 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 120
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV
Sbjct 121 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 180
Query 183 L 183
L
Sbjct 181 L 181
>gi|333992182|ref|YP_004524796.1| hypothetical protein JDM601_3542 [Mycobacterium sp. JDM601]
gi|333488150|gb|AEF37542.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=253
Score = 317 bits (812), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 161/241 (67%), Positives = 189/241 (79%), Gaps = 2/241 (0%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSG 87
DFG S+YAEY+LS VR+A +L SDPFVAIL FPFIPQA R+HY E+EIKA AVE G
Sbjct 13 DFGTSVYAEYQLSRAVRRATDLGSDPFVAILGFPFIPQARRDHYDEVEIKAPAVEQPMVG 72
Query 88 TATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQES 147
A LEATMHS+DLS ASW RP AK+ V +LESRIII S++LGRYLGI DLMV AP E+
Sbjct 73 KAMLEATMHSVDLSEASWRFRPGAKISVAKLESRIIIGSVYLGRYLGIRDLMVEAPPNET 132
Query 148 NDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGP 207
NDATGGTTESGIS + GLVF+GTP A + RVSV VDLSV D +TLVITPT V+TGP
Sbjct 133 NDATGGTTESGISSNHGLVFTGTP--AGYGKRVSVAVDLSVGGADHSTLVITPTGVLTGP 190
Query 208 DTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
DTADQ VP+++R AVL AF +P Q+LPFG+VP + GARGSDVIIEGI +T++L EF
Sbjct 191 DTADQHVPEEQRAAVLAAFHGSVPQQRLPFGLVPTSQGARGSDVIIEGIAEDMTVTLPEF 250
Query 268 K 268
+
Sbjct 251 R 251
>gi|145222241|ref|YP_001132919.1| hypothetical protein Mflv_1649 [Mycobacterium gilvum PYR-GCK]
gi|315442680|ref|YP_004075559.1| hypothetical protein Mspyr1_10350 [Mycobacterium sp. Spyr1]
gi|145214727|gb|ABP44131.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315260983|gb|ADT97724.1| hypothetical protein Mspyr1_10350 [Mycobacterium sp. Spyr1]
Length=265
Score = 314 bits (804), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 167/268 (63%), Positives = 199/268 (75%), Gaps = 4/268 (1%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
+RK+++GV A V AV ++GAVG DFGA+IYAEYRL+ +VR AANL DP VAIL FPF
Sbjct 2 VRKLVIGVL--ATVTAV-VLGAVGTDFGAAIYAEYRLARSVRTAANLNWDPSVAILGFPF 58
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
I QA R H+ E+EIKA V H +G A+LEATMHS+ L SWLI PDA L V +LESRI
Sbjct 59 ITQARRHHFDEVEIKASGVGHPVTGKASLEATMHSVGLG-DSWLIPPDATLTVAKLESRI 117
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
IIDS H+GRY+GI DL++ AP E+ D+TGGTTESGIS +RGLVF+GTP A F RVS+
Sbjct 118 IIDSTHVGRYMGIPDLLIEAPTAETEDSTGGTTESGISSNRGLVFTGTPDKAGFHERVSI 177
Query 183 LVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPN 242
VD S A D TLV+T T V+T P TADQ VPDD+ AVL AF ++LP QKLPFG+ P
Sbjct 178 AVDASTAGPDDTTLVLTATGVLTEPGTADQAVPDDQLAAVLAAFTTELPGQKLPFGIAPT 237
Query 243 TVGARGSDVIIEGITRGVTISLDEFKQS 270
T GARGSD+IIEGI VTI L EF+ S
Sbjct 238 TEGARGSDIIIEGIAEDVTIDLSEFRLS 265
>gi|169627844|ref|YP_001701493.1| hypothetical protein MAB_0743c [Mycobacterium abscessus ATCC
19977]
gi|169239811|emb|CAM60839.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=265
Score = 311 bits (796), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 155/245 (64%), Positives = 185/245 (76%), Gaps = 0/245 (0%)
Query 26 GADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAG 85
G DFG +I+AEYRLS T+R ANL SDP VAIL FPFIPQA+R Y E+EIKA V+HA
Sbjct 21 GTDFGFAIFAEYRLSRTLRTEANLSSDPSVAILVFPFIPQALRHRYKEIEIKAHGVDHAE 80
Query 86 SGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQ 145
+G ATLE T+H ID+S ASWLIRPD+ L V LESRIIIDS HLGR++GI+DL V P +
Sbjct 81 TGKATLEGTLHGIDVSRASWLIRPDSPLRVDRLESRIIIDSNHLGRFIGINDLAVEPPPR 140
Query 146 ESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVT 205
E NDATGGTTESGIS GL+F+GTP + F H+V+V VD+SV D+ L + T+VVT
Sbjct 141 EQNDATGGTTESGISTGTGLLFTGTPKTGEFQHKVTVSVDVSVGGPDKTDLQLVATSVVT 200
Query 206 GPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLD 265
GP TAD+ VP++++ V AF +P QKLPF + P TVGARGSDVIIEGI GVTISLD
Sbjct 201 GPGTADRDVPEEQQAGVFAAFTKVVPRQKLPFAIEPTTVGARGSDVIIEGIAEGVTISLD 260
Query 266 EFKQS 270
FKQS
Sbjct 261 AFKQS 265
>gi|120406046|ref|YP_955875.1| hypothetical protein Mvan_5098 [Mycobacterium vanbaalenii PYR-1]
gi|119958864|gb|ABM15869.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=265
Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/243 (63%), Positives = 186/243 (77%), Gaps = 1/243 (0%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSG 87
DFGA+IYAEYRL+ +VR +ANL DP VAIL FPFI QA R HY E+EIKA V+H G
Sbjct 24 DFGAAIYAEYRLARSVRSSANLDWDPSVAILGFPFITQAQRRHYDEVEIKASGVDHGVVG 83
Query 88 TATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQES 147
A+LEATMHS+ L SWLIRP + L VG+LESRIIIDS H+GRY+GI DL++ AP +E+
Sbjct 84 KASLEATMHSVGLP-DSWLIRPGSTLTVGKLESRIIIDSTHMGRYMGIPDLLIEAPTRET 142
Query 148 NDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGP 207
D+TGGTTESGIS + GLVF+GTP A F RVS+ VD+S+ + TLV+T T V+T P
Sbjct 143 EDSTGGTTESGISSNTGLVFTGTPDKAGFHERVSIAVDVSITGPESTTLVLTATGVLTEP 202
Query 208 DTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
TADQ VP+D+ AVL AF++ LP QKLPFG+ P T GARGSD+IIEGI GVTI+LDEF
Sbjct 203 GTADQAVPEDRVPAVLAAFSTTLPGQKLPFGIAPTTEGARGSDLIIEGIAEGVTINLDEF 262
Query 268 KQS 270
+ S
Sbjct 263 RLS 265
>gi|108801489|ref|YP_641686.1| hypothetical protein Mmcs_4526 [Mycobacterium sp. MCS]
gi|119870642|ref|YP_940594.1| hypothetical protein Mkms_4613 [Mycobacterium sp. KMS]
gi|126437474|ref|YP_001073165.1| hypothetical protein Mjls_4909 [Mycobacterium sp. JLS]
gi|108771908|gb|ABG10630.1| putative exported protein [Mycobacterium sp. MCS]
gi|119696731|gb|ABL93804.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237274|gb|ABO00675.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=265
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/268 (59%), Positives = 200/268 (75%), Gaps = 3/268 (1%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRKVL+G+ V V AVGADFG +IYAEYR S T+R ANL SDP+V I+ FPF
Sbjct 1 MRKVLIGLVATVTAVVVG---AVGADFGTAIYAEYRWSRTLRDVANLDSDPWVGIIGFPF 57
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ QAM + E+EI+A V+H G A+LEAT+H +DLS SWL+RPDA + VG++ESRI
Sbjct 58 VTQAMDHEFGEMEIRASGVDHPVVGKASLEATLHDVDLSETSWLVRPDAPMAVGKVESRI 117
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
II+S H+GR++GI DL+V AP E+NDATGGTTESGIS ++G+VF+GTP +A F RVSV
Sbjct 118 IINSTHVGRFIGIPDLLVEAPTGETNDATGGTTESGISSNKGVVFTGTPEAAGFDERVSV 177
Query 183 LVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPN 242
VDLSV+ D+ TLV+T T V+TG TA+Q VP+DK AVL AF++ +P QKLPF + P
Sbjct 178 AVDLSVSGPDQTTLVMTATDVLTGAGTAEQAVPEDKTAAVLDAFSASMPGQKLPFAIAPT 237
Query 243 TVGARGSDVIIEGITRGVTISLDEFKQS 270
GARGSDVIIEGI +TI+LD F+QS
Sbjct 238 AQGARGSDVIIEGIADDMTITLDGFRQS 265
>gi|118468523|ref|YP_890013.1| hypothetical protein MSMEG_5785 [Mycobacterium smegmatis str.
MC2 155]
gi|118169810|gb|ABK70706.1| probable exported protein [Mycobacterium smegmatis str. MC2 155]
Length=271
Score = 301 bits (771), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 146/243 (61%), Positives = 189/243 (78%), Gaps = 0/243 (0%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSG 87
DFGA+IYAEYRL+ TVR AA+L DP+VAIL FPFIPQA Y E+EI+A V+H +
Sbjct 29 DFGAAIYAEYRLARTVRSAASLNWDPWVAILGFPFIPQARDHRYNEIEIRANGVDHPVAE 88
Query 88 TATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQES 147
+LEAT+H +D++ ASWLIR DA LPV E ESRIIIDS H+GRY+GI DL+V AP +++
Sbjct 89 KVSLEATLHDVDITEASWLIREDAPLPVAEAESRIIIDSTHVGRYMGIDDLLVEAPSRDT 148
Query 148 NDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGP 207
NDATGGTTESGISG+ GLVF+GTP ++ RVSV VDLS+ D++TLV+T T ++TGP
Sbjct 149 NDATGGTTESGISGNTGLVFTGTPKASGLDKRVSVAVDLSLEGPDQSTLVLTATGILTGP 208
Query 208 DTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
+TAD+ VPDDK +VL F++ +P+ +LPFG+ P + GARGSD+IIEGI GVTI L F
Sbjct 209 NTADEQVPDDKLASVLDEFSNTIPDLRLPFGIAPTSQGARGSDIIIEGIGEGVTIDLAGF 268
Query 268 KQS 270
+++
Sbjct 269 RKT 271
>gi|226364351|ref|YP_002782133.1| hypothetical protein ROP_49410 [Rhodococcus opacus B4]
gi|226242840|dbj|BAH53188.1| hypothetical protein [Rhodococcus opacus B4]
Length=259
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/268 (36%), Positives = 146/268 (55%), Gaps = 11/268 (4%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRK+++G+ +VA+ +V DFG++ YAEYR+S +R A+L +DP V + FPF
Sbjct 1 MRKLIIGIV---FLVALGLV----VDFGSAAYAEYRVSRELRAGASLTADPEVTVHGFPF 53
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ QA Y +EI+A V+ G T+E+T+ + + + LPV L R+
Sbjct 54 LTQAWNGKYENIEIRAQGVQSDVVGEVTIESTLLGVSAPLSDLVDGSVTSLPVDHLSGRM 113
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
+ID+ LGR+L I DL V+AP +D TGG+ SG+ + G+V +GT VSV
Sbjct 114 LIDATDLGRFLDIPDLQVSAPPASKSDGTGGSGGSGMPTAGGVVLTGTVPVGPLETTVSV 173
Query 183 LVDLSVASDDRATLVITPTAVVTGPDT-ADQPVPDDKRDAVLHAFASKLPNQKLPFGVVP 241
DL + D + I + GP+ AD +P+ A+L F + ++LPFGV P
Sbjct 174 QADLVL---DGGQVKIVASDFYFGPEGHADFTIPEPLAPAILGLFTRTIDPKELPFGVQP 230
Query 242 NTVGARGSDVIIEGITRGVTISLDEFKQ 269
V A GS ++IEG+ VTI L+E +
Sbjct 231 TEVYAEGSQIVIEGVGDNVTIDLNELQN 258
>gi|111021830|ref|YP_704802.1| hypothetical protein RHA1_ro04859 [Rhodococcus jostii RHA1]
gi|110821360|gb|ABG96644.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=259
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 96/267 (36%), Positives = 146/267 (55%), Gaps = 11/267 (4%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRK+++G+ +VA+ +V DFG++ YAEYR+S +R A+L +DP V + FPF
Sbjct 1 MRKLIIGIV---FLVALGLV----VDFGSAAYAEYRVSRELRAGASLTADPEVTVHGFPF 53
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ QA Y +EI+A V+ G T+E+T+ + + + LPV L R+
Sbjct 54 LNQAWDGKYENIEIRAQGVQSDVVGEVTVESTLLGVSAPLSDLVDGSVKTLPVDHLSGRM 113
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
+ID+ LGR+L I DL V+AP +D TGG+ SG+ + G+V +GT VSV
Sbjct 114 LIDATDLGRFLDIPDLQVSAPPASKSDGTGGSGGSGMPTAGGVVLTGTVPVGPIETTVSV 173
Query 183 LVDLSVASDDRATLVITPTAVVTGPDT-ADQPVPDDKRDAVLHAFASKLPNQKLPFGVVP 241
DL + D + I + GP+ AD +P+ A+L F + ++LPFGV P
Sbjct 174 QADLVL---DGGQVKIVASDFYFGPEGHADFTIPEPLAPAILGLFTRTIDPRELPFGVQP 230
Query 242 NTVGARGSDVIIEGITRGVTISLDEFK 268
V A GS ++IEG+ VTI L+E +
Sbjct 231 TEVYAEGSQIVIEGVGNNVTIDLNELQ 257
>gi|312138322|ref|YP_004005658.1| hypothetical protein REQ_08590 [Rhodococcus equi 103S]
gi|325674761|ref|ZP_08154448.1| hypothetical protein HMPREF0724_12230 [Rhodococcus equi ATCC
33707]
gi|311887661|emb|CBH46973.1| putative secreted protein [Rhodococcus equi 103S]
gi|325554347|gb|EGD24022.1| hypothetical protein HMPREF0724_12230 [Rhodococcus equi ATCC
33707]
Length=271
Score = 129 bits (324), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/269 (35%), Positives = 144/269 (54%), Gaps = 14/269 (5%)
Query 3 MRKVLVGVTGAAIVVAVLIVG-AVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFP 61
+RK+++G+ V +VG AV DFGA+ Y+E+R+S +R+ +L +DP V I FP
Sbjct 11 VRKLIIGL--------VCLVGLAVVVDFGAAAYSEFRVSRALREGGSLNADPEVTIHGFP 62
Query 62 FIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESR 121
F+ QA Y +EI+A VE G T+EA++ + + ++ L +PV L+ R
Sbjct 63 FLTQAWNGKYDNVEIRAQQVEADMIGEVTIEASLKGVVVPASALLDGSVQTVPVDYLDGR 122
Query 122 IIIDSMHLGRYLGISDLMVAA-PRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
+ ID+ LG++LGI DL V+A P +S+ G + G+V +GT V
Sbjct 123 MKIDATDLGKFLGIPDLQVSAPPASKSDGTGGSGGSGSTTDDGGIVLTGTVPVGPLQTTV 182
Query 181 SVLVDLSVASDDRATLVITPTAVVTGPD-TADQPVPDDKRDAVLHAFASKLPNQKLPFGV 239
SV DL + + L+I T GP+ A+ VP R VL F + Q LPFG+
Sbjct 183 SVQADLVLRGEQ---LMIVATDFNFGPEGEAEFTVPAPLRQQVLDRFTKTIDPQSLPFGI 239
Query 240 VPNTVGARGSDVIIEGITRGVTISLDEFK 268
+P V A+GS +++EG + I+LDE +
Sbjct 240 MPTEVYAQGSQIVVEGTGENLVINLDELQ 268
>gi|226308294|ref|YP_002768254.1| hypothetical protein RER_48070 [Rhodococcus erythropolis PR4]
gi|229488487|ref|ZP_04382353.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|226187411|dbj|BAH35515.1| hypothetical protein RER_48070 [Rhodococcus erythropolis PR4]
gi|229323991|gb|EEN89746.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=259
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/268 (34%), Positives = 144/268 (54%), Gaps = 11/268 (4%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRK+++G+ V +L +G V ADFGA+ YAEYR+S +R A+L SDP V FPF
Sbjct 1 MRKLIIGI------VFLLGLGLV-ADFGAAAYAEYRVSRELRTGASLESDPEVTFNGFPF 53
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ QA+ Y ++ ++A V+ G T+EA + + + ++ + +LPV +L+ R+
Sbjct 54 LTQALGGKYKDVYVRATGVQSDVVGEVTVEADLRGVTVPFSDIVNGNVTQLPVDKLDGRM 113
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
I++ LG+ L I DL V++P +D TGG+ +G S + +V +GT VSV
Sbjct 114 GINATDLGKLLNIPDLQVSSPPANKSDGTGGSGGTGASTAGAVVLTGTVAVGPVETAVSV 173
Query 183 LVDLSVASDDRATLVITPTAVVTGPD-TADQPVPDDKRDAVLHAFASKLPNQKLPFGVVP 241
+L + + + I + + GP+ AD +P VL F+ + Q LP+G+ P
Sbjct 174 QANLVL---EGGQVKIVASNLYFGPEGKADFSIPAALEPVVLGLFSYTIDPQALPYGIQP 230
Query 242 NTVGARGSDVIIEGITRGVTISLDEFKQ 269
+ V A G ++IEG TI L E +
Sbjct 231 SLVYAEGGRIVIEGSAENTTIDLAELQN 258
>gi|333918418|ref|YP_004491999.1| hypothetical protein AS9A_0746 [Amycolicicoccus subflavus DQS3-9A1]
gi|333480640|gb|AEF39200.1| hypothetical protein AS9A_0746 [Amycolicicoccus subflavus DQS3-9A1]
Length=252
Score = 115 bits (287), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/239 (31%), Positives = 122/239 (52%), Gaps = 4/239 (1%)
Query 27 ADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGS 86
A+ G + Y E+R+S +R +A L +DP V I FPF+ QA R + +EI+A V+ +
Sbjct 5 AELGTAAYTEHRISRALRASAELSADPDVVIHGFPFLLQAARGEFHGIEIRADRVDTDIA 64
Query 87 GTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQE 146
G T+EA + + L +W +R L ELE RI++ + LG + I DL +
Sbjct 65 GRVTIEANLEDVTLEPEAWYVRRTDALHARELEGRIVMHQIELGEFFDIPDLRITPLPTG 124
Query 147 SNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTG 206
DA G T + I+ R ++ + + + V+V L +A L + P TG
Sbjct 125 VIDAFGTATPTTIARFRPVLLTASFPDLGISDEVNVEARLRLAG---TQLHVDPLRYYTG 181
Query 207 PD-TADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISL 264
D + + PVP++ D VL +F+ + Q++PFG+ P +G +++EG V++ L
Sbjct 182 RDGSWENPVPEELHDEVLRSFSITIDVQEVPFGLAPAVAFPQGGRLVVEGSGENVSLEL 240
>gi|317509395|ref|ZP_07967014.1| hypothetical protein HMPREF9336_03386 [Segniliparus rugosus ATCC
BAA-974]
gi|316252318|gb|EFV11769.1| hypothetical protein HMPREF9336_03386 [Segniliparus rugosus ATCC
BAA-974]
Length=262
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/274 (31%), Positives = 133/274 (49%), Gaps = 25/274 (9%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
+K LVG A++ ++++ ADF + ++EYR S VR A+ L+ DP V I FPF
Sbjct 2 WKKALVGF---ALLCGMIVL----ADFLLAAHSEYRFSRAVRGASGLKGDPSVTINGFPF 54
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ + R Y ++ I+A V A +EAT++ + + I +L V +R
Sbjct 55 LWHSERGRYEQITIQATDVPLGEGKYANMEATLNQVSAARGGVAILGADRLHVDSARART 114
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGIS--------GSRGLVFSGT-PIS 173
+D+ +LGRYLGI DL +++ +T E S + G+V +GT +
Sbjct 115 QLDARNLGRYLGIPDLRISS-------STAHAQEMPYSFPLLRRTLATYGVVLTGTVHLG 167
Query 174 ANFAHRVSVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQ 233
FA RV+V + + + ++P PD P P + D VL+ F LPN
Sbjct 168 DGFASRVAVRAAVWLEGQAVRIVPVSPYTGFEAPDAVLTP-PGSESD-VLNLFNVTLPNL 225
Query 234 KLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
LPF + P V GS ++IEG T+G+ ++ F
Sbjct 226 PLPFDIAPQQVSVVGSKIVIEGQTKGMDVTPQRF 259
>gi|296395420|ref|YP_003660304.1| hypothetical protein Srot_3049 [Segniliparus rotundus DSM 44985]
gi|296182567|gb|ADG99473.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=267
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/268 (30%), Positives = 131/268 (49%), Gaps = 13/268 (4%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
+KVL+G A++ VL++ ADF + ++EYR S VR A+ L+ DP V I FPF
Sbjct 7 WKKVLLGF---ALLCGVLVL----ADFLLAAHSEYRFSRAVRGASGLKGDPSVTISGFPF 59
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ + R Y ++ I+A V G A +EAT+ + + + I +L V ++R
Sbjct 60 LWHSERGRYEKITIQAADVPLGGGRYADMEATLGEVSSAKRGFAILGADRLHVNFAKART 119
Query 123 IIDSMHLGRYLGISDLMV--AAPRQESNDATGGTTESGISGSRGLVFSGT-PISANFAHR 179
+D+ +LGRYL I DL + A R + + ++ + G+V +GT + FA R
Sbjct 120 QLDARNLGRYLNIPDLRISSATARAQQMPYSFPLLRRTLT-TYGVVLTGTIHLGDGFASR 178
Query 180 VSVLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGV 239
V+V + + + ++P + PD P P VL+ F LP LPF +
Sbjct 179 VAVRAAIWLEGQSVRIVPVSPYTGLEAPDAV--PTPPGSESDVLNLFNITLPQLPLPFDI 236
Query 240 VPNTVGARGSDVIIEGITRGVTISLDEF 267
V GS +++EG T+ + ++ F
Sbjct 237 AAEQVSVVGSKIVVEGQTKEMDVTPQRF 264
>gi|54022564|ref|YP_116806.1| hypothetical protein nfa5970 [Nocardia farcinica IFM 10152]
gi|54014072|dbj|BAD55442.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=270
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/279 (32%), Positives = 143/279 (52%), Gaps = 22/279 (7%)
Query 3 MRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPF 62
MRK+++G+ A VAVL+ DF A+ Y+EYR+S T+R+ A+L +DP V I FPF
Sbjct 1 MRKLIIGLLCLA-GVAVLV------DFAAAAYSEYRVSRTLREGADLSADPEVTIHGFPF 53
Query 63 IPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRI 122
+ QA+ Y + I+A G +++AT+ + LS + ++PV +E+ +
Sbjct 54 LAQALDGRYQSVVIRAAVKRPDIPGEISVDATLTGVQLSLSELNDGGGRRVPVERVEAAM 113
Query 123 IIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGT---------PIS 173
I+ LGR I DL V + + +D TGG+ SG++ LV +GT +
Sbjct 114 RIEPTELGRLFNIPDLQVHSRPADKSDGTGGSGGSGMTTEGALVLTGTLPGTGTQPGKAA 173
Query 174 ANFAHRVSVLVDLSVASDDRATLVITPTAVVTGPD---TADQPVPDDKRDAVLHAFASKL 230
+V+V +L + D + IT T + D + VP+ ++ AVL F +
Sbjct 174 GQGGEKVAVDAELVLDGDQ---IRITATELHRSSDSDLSTTAVVPEAEQPAVLARFTRTI 230
Query 231 PNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEFKQ 269
+ LPFGV P V A G ++++G VTI LD+ ++
Sbjct 231 DTKDLPFGVHPTKVIALGGQIVVDGRGDNVTIDLDQLQR 269
>gi|296141221|ref|YP_003648464.1| hypothetical protein Tpau_3546 [Tsukamurella paurometabola DSM
20162]
gi|296029355|gb|ADG80125.1| conserved hypothetical protein [Tsukamurella paurometabola DSM
20162]
Length=275
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/260 (33%), Positives = 125/260 (49%), Gaps = 11/260 (4%)
Query 15 IVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAEL 74
I +AVL+V A+ G + AEYRLS +R AA+L SDP V + FP++ +
Sbjct 15 IALAVLVVALFLAELGTAATAEYRLSRELRAAADLDSDPEVTVGGFPYLTSGGHHPKLTI 74
Query 75 EIKAFAVEHAGSGTATLEATMHSIDLSYASW-LIRPDAKLPVGELESRIIIDSMHLGRYL 133
+ + + A +EA + ++DL A D + G +ESR+ +D GRYL
Sbjct 75 AVPSQVGDPKDPKKARIEAELTAVDLPGAVLPTFTADTPIRAGHIESRVRLDQKTFGRYL 134
Query 134 GISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDR 193
GI DL V P + A G + + + G+V +G I + + V +SVA+D
Sbjct 135 GIVDLQVHTPAPKRAGA-GSPADGYVKSATGVVLTGE-IPLPTPQQPARTVLISVAADFS 192
Query 194 A---TLVITPTAVVTGP-DTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARG- 248
A + + T + TGP D A + + AVL AF LP LPF V GARG
Sbjct 193 AVGQAIHVQATRIYTGPEDHAKADLLPGEEPAVLAAFTRTLPAMALPFAVA--ATGARGE 250
Query 249 -SDVIIEGITRGVTISLDEF 267
+DV++ G VT++ F
Sbjct 251 NADVVLLGEADDVTVTPGGF 270
>gi|343926096|ref|ZP_08765608.1| hypothetical protein GOALK_053_00540 [Gordonia alkanivorans NBRC
16433]
gi|343764022|dbj|GAA12534.1| hypothetical protein GOALK_053_00540 [Gordonia alkanivorans NBRC
16433]
Length=285
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/264 (32%), Positives = 118/264 (45%), Gaps = 28/264 (10%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSG 87
D GA+I E+RLS + ++ + DP V + FPF+ QA Y+ I A VE G
Sbjct 26 DVGAAIRGEHRLSRALAESPRVPFDPEVTLAGFPFLTQAANGEYSGATISARGVEMPGCE 85
Query 88 TA------TLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVA 141
A L AT+ + D L + + +D++ L RYL I+DL V+
Sbjct 86 PARGVCRGELGATLGRFQGADRGDFTGSDV-LHTASISAYTRLDAVTLARYLRITDLTVS 144
Query 142 APRQESNDATGGTTESGISGSRGLVFSGT-------------PISANFAH----RVSVLV 184
P + GG + +S S G+VF+GT P SA+ RVSV V
Sbjct 145 TPAPDGRAGGGGPQDGVVSRSEGVVFTGTVALPPEDGLDADDPPSASAYTGPKVRVSVAV 204
Query 185 DLSVASDDRATLVITPTAVVTGPDTA-DQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNT 243
DLSV L I T TGP+ D VP+D R AVL F+ LP + +G+V
Sbjct 205 DLSVTY---GALEIRATDFYTGPERHLDAEVPEDMRAAVLDRFSMVLPRLPMAWGLVAQR 261
Query 244 VGARGSDVIIEGITRGVTISLDEF 267
+ G DV + + G + D F
Sbjct 262 AESFGGDVQLVSESGGTDVRPDRF 285
>gi|262203795|ref|YP_003275003.1| hypothetical protein Gbro_3936 [Gordonia bronchialis DSM 43247]
gi|262087142|gb|ACY23110.1| hypothetical protein Gbro_3936 [Gordonia bronchialis DSM 43247]
Length=312
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/263 (29%), Positives = 118/263 (45%), Gaps = 27/263 (10%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHY-----AELEIKAFAVE 82
D G ++ EY++S + + + DP V + FPF A + A ++
Sbjct 54 DTGLAVRGEYQMSRAIAASPRVTFDPEVTLKGFPFTTHARAGEFDGAVIAARDVTLDGCA 113
Query 83 HAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAA 142
G L AT+ + + W +P + + + +D++ + RYLGI+DL V+
Sbjct 114 GRGGCRGELGATLGAFSVG-DGWRFQPGDVVHTASVSAYTKLDAIAMARYLGITDLTVST 172
Query 143 PRQESNDATGGTTESGISGSRGLVFSGT----PISANFAH-------------RVSVLVD 185
P + GG + S G+VF+GT P + + H +VSV VD
Sbjct 173 PAPDGKAGGGGPQDGAPSRESGVVFTGTVALPPSAGDDPHNPPSASSYEGPKVKVSVAVD 232
Query 186 LSVASDDRATLVITPTAVVTGPDT-ADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTV 244
L++ D R L + T TGP+ D VP + R AVL F++ LP LP+G+VP
Sbjct 233 LAIV-DGR--LQVRATRYYTGPERHEDDDVPAEMRTAVLDRFSTVLPTIPLPWGLVPQRA 289
Query 245 GARGSDVIIEGITRGVTISLDEF 267
+ G D+ + T + LDEF
Sbjct 290 ASLGGDIRLLADTGPTDLVLDEF 312
>gi|237785012|ref|YP_002905717.1| hypothetical protein ckrop_0395 [Corynebacterium kroppenstedtii
DSM 44385]
gi|237757924|gb|ACR17174.1| putative secreted protein [Corynebacterium kroppenstedtii DSM
44385]
Length=312
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/263 (27%), Positives = 118/263 (45%), Gaps = 22/263 (8%)
Query 13 AAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYA 72
AAIV+ L V A D + E R+S ++ +NL P V FPF+ +A +
Sbjct 46 AAIVLMFLAVCAWVGDSLVAARTESRISRELQHYSNLPVQPDVTAGGFPFLYEAESGKLS 105
Query 73 ELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRY 132
L + A ++ G G T+ ++ +I+ S L PV + + + +D + LG
Sbjct 106 SLTVDAQDLDVPGFGLVTVHSSATNIEASTHDILHGRIEDAPVETVSTTLSLDGLALGER 165
Query 133 LGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDD 192
LGI+DL + R+ +N A G ES VFSG+ +V V L + +D
Sbjct 166 LGITDLTI---RRLANTAPNGGQESDS------VFSGS--IGGLDKPATVAVRLRIKAD- 213
Query 193 RATLVITPTAVVTGPDTADQ--------PVPDDKRDAVLHAFASKLPNQKLPFGVVPNTV 244
+ + V+ GP D+ +P+D RD + AF+ +L + LP P+ +
Sbjct 214 --VISMDAYEVLDGPANRDKDAPVVKGREIPEDIRDEIKKAFSLQLEGKYLPLRARPDFI 271
Query 245 GARGSDVIIEGITRGVTISLDEF 267
G + ++ + VTI+L +
Sbjct 272 YCEGGSIFLQASQQNVTINLSDL 294
>gi|134103526|ref|YP_001109187.1| hypothetical protein SACE_7103 [Saccharopolyspora erythraea NRRL
2338]
gi|291008371|ref|ZP_06566344.1| hypothetical protein SeryN2_27951 [Saccharopolyspora erythraea
NRRL 2338]
gi|133916149|emb|CAM06262.1| hypothetical protein SACE_7103 [Saccharopolyspora erythraea NRRL
2338]
Length=271
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/263 (31%), Positives = 124/263 (48%), Gaps = 18/263 (6%)
Query 14 AIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAE 73
AI + ++I V ADFGA+ AEY++S +R+ L DP V I FPF+ QA + +
Sbjct 5 AITLVIVIGLLVAADFGAAAIAEYQVSKKMRQELALNEDPSVRINGFPFLYQAAVGDFRD 64
Query 74 LEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYL 133
+ + A AV+ +EA +H +S + ++ V EL R+ + + +GR++
Sbjct 65 VRLAAQAVKVGQLSEVGIEADLHHARVSTPDVVAGKADRIQVDELVGRVKLKASDVGRFI 124
Query 134 GISDLMVA-APRQ----------ESNDATGGTTESGISGSRGLV-FSGTPISANFAHRVS 181
GI+DL + AP+ S DA S + +R V G+ A +V
Sbjct 125 GITDLTINPAPKDALTSEGGSSEGSGDADQSGPSSTVDRTRTTVQLDGSVNIAGEQTKVK 184
Query 182 VLVDLSVASDDRATLVITPTA--VVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGV 239
V+ LS+ + L I P +VTG + P+P+ +VL F + L LPF V
Sbjct 185 VIAVLSLLN---GQLKIEPRKLDIVTG-SYGEIPLPEVFERSVLEQFNTSLDPGLLPFKV 240
Query 240 VPNTVGARGSDVIIEGITRGVTI 262
P VG +I+EG VTI
Sbjct 241 TPTAVGVERGALIVEGSAANVTI 263
>gi|213966470|ref|ZP_03394644.1| putative secreted protein [Corynebacterium amycolatum SK46]
gi|213950896|gb|EEB62304.1| putative secreted protein [Corynebacterium amycolatum SK46]
Length=285
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/265 (25%), Positives = 123/265 (47%), Gaps = 24/265 (9%)
Query 10 VTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMRE 69
+ G+ + VA L++ D G + +AEY+LS +++ A L P+VAI ++ +
Sbjct 10 IGGSILAVAALVIAT---DMGFASHAEYKLSEHIQETAQLEMTPYVAIGGQAYLSSFVTG 66
Query 70 HYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHL 129
++ + + VE G +LE ++ + +S L + P + +++ +D + L
Sbjct 67 KWSSVTSRIRDVEVPDFGLVSLEYGASNVKIPASSVLSGNFPESPTKQYFTKLSLDGVSL 126
Query 130 GRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVA 189
G LG++DL + + ++S+ G TE+ +F TP A + + V L +
Sbjct 127 GNKLGLTDLSIQS-LKDSSPTGGWETEA--------IFEATP--AGWQGKTQVSAKLRIV 175
Query 190 SDDRATLVITPTAVVTGP----DTADQPVPD-DKRDA--VLHAFASKLPNQKLPFGVVPN 242
S D ++ITP +++ P D+ P+ + DA +L F L + ++P G+
Sbjct 176 SRD---VIITPMEIISAPSSPTDSKIHSKPELSEVDAQHILDTFRLTLRDSEIPMGMPAT 232
Query 243 TVGARGSDVIIEGITRGVTISLDEF 267
V G V IEG T+S F
Sbjct 233 RVYVSGGSVTIEGEQIQCTVSPTNF 257
>gi|257057707|ref|YP_003135539.1| hypothetical protein Svir_37680 [Saccharomonospora viridis DSM
43017]
gi|256587579|gb|ACU98712.1| hypothetical protein Svir_37680 [Saccharomonospora viridis DSM
43017]
Length=270
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/262 (26%), Positives = 105/262 (41%), Gaps = 42/262 (16%)
Query 27 ADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGS 86
ADFGA+ +AE+ +S R+ L DP V+I FPF QA+ Y + I A V
Sbjct 18 ADFGAATFAEHTVSQKAREQLGLDQDPAVSIHGFPFTLQAISGEYDHISITADGVRVQEL 77
Query 87 GTATLEATMHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLG-----ISDLMVA 141
++ A +H D K P+ +L S +D++ +GR +G SD+
Sbjct 78 QDISVRANLH-------------DVKAPMSDLTSG-NVDNIKIGRLVGEITLKASDIARV 123
Query 142 APRQESND--------------------ATGGTTESGISGSRGLVFSGTPISANFAHRVS 181
AP +D ESG + G+ SG A R+
Sbjct 124 APLTNIDDLRIEPSSKAYVLHGEGVDEEKAAEIEESGDDSTAGVRLSGKADVA--GERIE 181
Query 182 VLVDLSVASDDRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVP 241
+ ++ D T+ ITP + G D VP++ + A+L F + + +PF V P
Sbjct 182 IFA-FAMIELDGTTIRITPHRLQFGNDKETTVVPEEVQQALLPNFEADINAGDMPFTVTP 240
Query 242 NTVGARGSDVIIEGITRGVTIS 263
+ + + G VT +
Sbjct 241 TAIHVASGSLTLHGEAENVTFA 262
>gi|326384906|ref|ZP_08206581.1| hypothetical protein SCNU_18272 [Gordonia neofelifaecis NRRL
B-59395]
gi|326196425|gb|EGD53624.1| hypothetical protein SCNU_18272 [Gordonia neofelifaecis NRRL
B-59395]
Length=304
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/288 (26%), Positives = 128/288 (45%), Gaps = 26/288 (9%)
Query 4 RKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFI 63
R + +G A IVV ++ + DF AS AE+RL+ V+ + + +P V + FPF+
Sbjct 15 RYLRIGAWIAVIVVVGSVLALIVDDFAAS-RAEHRLAVAVQASPGVPFEPDVIMAGFPFL 73
Query 64 PQAMREHYAELEIKAFAVEHAGS-----GTATLEATMHSIDLSYASWLIRPDAKLPVGEL 118
++ + I A V G + ++A + + DL + I P++ L +
Sbjct 74 THRASGDFSSVLISAEGVPIEGCTGEPVCRSAVDARLQTTDLG-DTGAIGPESVLRARSM 132
Query 119 ESRIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGT-------- 170
+ IDS LGR +GI DL + P E GG + + + G++ SGT
Sbjct 133 RAETRIDSPTLGRLMGIVDLYINTPAPEDKVGGGGPGDGLLERTEGIMLSGTVPLPGSPE 192
Query 171 ------PISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGPD---TADQPVPDDKRDA 221
P +A + + + S + I T GP+ +AD VP++ R A
Sbjct 193 TQNGYPPSAAAYTAPKVKVSVSATVSVVDGRVRIEATDFYDGPEEHYSAD--VPEEFRSA 250
Query 222 VLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEFKQ 269
VL F++ LP ++ +G +RGSD++ G T V + ++ +
Sbjct 251 VLKRFSTTLPALQMAWGTTAKHALSRGSDLVAVGETGPVAVRPTDYAK 298
>gi|300859132|ref|YP_003784115.1| hypothetical protein cpfrc_01715 [Corynebacterium pseudotuberculosis
FRC41]
gi|300686586|gb|ADK29508.1| putative secreted protein [Corynebacterium pseudotuberculosis
FRC41]
gi|302206826|gb|ADL11168.1| Hypothetical protein CpC231_1708 [Corynebacterium pseudotuberculosis
C231]
gi|302331388|gb|ADL21582.1| Hypothetical protein Cp1002_1716 [Corynebacterium pseudotuberculosis
1002]
gi|341825520|gb|AEK93041.1| Hypothetical protein CpPAT10_1716 [Corynebacterium pseudotuberculosis
PAT10]
Length=262
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/266 (28%), Positives = 113/266 (43%), Gaps = 24/266 (9%)
Query 4 RKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFI 63
R L V A I + LIV G D + AE+R+S VR A+L +P V + FP++
Sbjct 6 RSRLSTVVWAGIALMSLIVALWGVDSAIAARAEHRISHDVRNNAHLDQNPSVYLGGFPYV 65
Query 64 PQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRII 123
+ L + VE G T A + I+L+ S L D + +L +R +
Sbjct 66 GALLSGKVPGLGVSVSDVEVNDFGLLTTTAQVTDIELNR-SQLFSGDVEGTHAQLLTRTV 124
Query 124 -IDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSV 182
D++ +G+ L I DL ++ P S GT S + GTP F+ V+V
Sbjct 125 GFDAVAVGKQLDILDLDLSNPYDVS---PAGTNSSEVQ------LRGTP--DGFSKPVTV 173
Query 183 LVDLSVASDDRATLVITPTAVVT-GPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVP 241
+ + + + T +TPT VV G D P A+ AF L + LP
Sbjct 174 IATMRL---EGPTFKLTPTTVVDRGESDLDDP-------AIFRAFTWTLNTKTLPINAQA 223
Query 242 NTVGARGSDVIIEGITRGVTISLDEF 267
+ V G + E R VT+ L++
Sbjct 224 SYVYLAGGSIRFEAQERNVTLRLEDL 249
>gi|334563923|ref|ZP_08516914.1| putative secreted protein [Corynebacterium bovis DSM 20582]
Length=274
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/261 (25%), Positives = 117/261 (45%), Gaps = 25/261 (9%)
Query 2 PMRKVLVGVTGAAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFP 61
P R+ L+ T +VVAVL+ V AD + AE+R+S + + A+L S P V + FP
Sbjct 3 PRRRRLL--TALGVVVAVLLAATV-ADALVAARAEHRISERIYRDAHLASPPAVEVTGFP 59
Query 62 FIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESR 121
++ + + ++A V+ G G ++ ++ + L + + P ++ +
Sbjct 60 YLGAVLSHEVPSVSVQANDVDVPGFGLVSVTSSAQKVTLPTDAVVSGSFTDAPARKVFTS 119
Query 122 IIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVS 181
+ +D + +GR +G+ DL++ A + + + G TE+ VF GTP F+ +
Sbjct 120 LRLDGVAVGRRMGVDDLLIQA-KDDISPQGGWETEA--------VFEGTP--RGFSEPAA 168
Query 182 VLVDLSVASDDRATLVITPTAVVTGP-DTADQPVPDDKRD-------AVLHAFASKLPNQ 233
V + L + D + I PT V+ P DT + D D ++ F +P
Sbjct 169 VEMRLRIREGD---VHIVPTRVIRAPRDTGPRAPSVDGADLDPALTRQIMDTFRLDIPGS 225
Query 234 KLPFGVVPNTVGARGSDVIIE 254
P P+ + G V +E
Sbjct 226 SFPLRSRPSRIYTSGGSVTVE 246
>gi|308277078|gb|ADO26977.1| Putative secreted protein [Corynebacterium pseudotuberculosis
I19]
Length=243
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/250 (28%), Positives = 107/250 (43%), Gaps = 24/250 (9%)
Query 20 LIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAF 79
LIV G D + AE+R+S VR A+L +P V + FP++ + L +
Sbjct 3 LIVALWGVDSAIAARAEHRISHDVRNNAHLDQNPSVYLGGFPYVGALLSGKVPGLGVSVS 62
Query 80 AVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRII-IDSMHLGRYLGISDL 138
VE G T A + I+L+ S L D + +L +R + D++ +G+ L I DL
Sbjct 63 DVEVNDFGLLTTTAQVTDIELNR-SQLFSGDVEGTHAQLLTRTVGFDAVAVGKQLDILDL 121
Query 139 MVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVI 198
++ P S GT S + GTP F+ V+V+ + + + T +
Sbjct 122 DLSNPYDVS---PAGTNSSEVQ------LRGTP--DGFSKPVTVIATMRL---EGPTFKL 167
Query 199 TPTAVVT-GPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGIT 257
TPT VV G D P A+ AF L + LP + V G + E
Sbjct 168 TPTTVVDRGESDLDDP-------AIFRAFTWTLNTKTLPINAQASYVYLAGGSIRFEAQE 220
Query 258 RGVTISLDEF 267
R VT+ L++
Sbjct 221 RNVTLRLEDL 230
>gi|336324674|ref|YP_004604640.1| hypothetical protein CRES_0113 [Corynebacterium resistens DSM
45100]
gi|336100656|gb|AEI08476.1| hypothetical protein CRES_0113 [Corynebacterium resistens DSM
45100]
Length=318
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/280 (24%), Positives = 116/280 (42%), Gaps = 34/280 (12%)
Query 4 RKVLVGVTGAAIVVAVLIVGAVGADFGASIYA---EYRLSTTVRKAANLRSDPFVAILRF 60
R G+ + +VA+LI A F S+ A E+ S + +NL + P V +
Sbjct 42 RWAKWGLRALSTIVALLIAVA----FTDSLVAGRTEHLYSKALYDQSNLANPPAVFVAGS 97
Query 61 PFIPQAMREHYAELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES 120
P+ A+ + + A V+ G G ++ + + L + + + P ++ +
Sbjct 98 PYTAAALTHEVQAITVNAKDVDMPGWGLMSVHKSAQYVTLPWQAVFGQSFTNAPAKKVFT 157
Query 121 RIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRV 180
R+ +D + +G + + DL++ R + + G TE+ +F GTP F
Sbjct 158 RLQLDGVTIGGKMHVDDLLIQN-RDDISPRGGWETEA--------IFEGTP--KGFDAPA 206
Query 181 SVLVDLSVASDDRATLVITPTAVVTGP------------DTADQPVPDDK-RDAVLHAFA 227
+V + L V D + +TPT V+ GP T D DD+ + + AF
Sbjct 207 TVEMKLRVKEGD---VYLTPTRVIRGPSSEAGEGVLSTVKTVDGDKLDDQLKKRIERAFT 263
Query 228 SKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
K+P ++LP P V G V E T+SL +
Sbjct 264 LKIPGERLPLKEKPKRVYVAGGSVFFESEQLYTTVSLQDL 303
>gi|172041290|ref|YP_001801004.1| putative secreted protein [Corynebacterium urealyticum DSM 7109]
gi|171852594|emb|CAQ05570.1| putative secreted protein [Corynebacterium urealyticum DSM 7109]
Length=298
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/240 (24%), Positives = 106/240 (45%), Gaps = 22/240 (9%)
Query 36 EYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSGTATLEATM 95
E ++S + + ++L P V + FP++ QA+ + + + A V AG G T+ ++
Sbjct 58 EAKISQQLYEGSHLPKPPEVMLAGFPYVTQALTKELEAVTVTAKDVPIAGFGDVTVHSSA 117
Query 96 HSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQESNDATGGTT 155
+D++ + P ++ R+ + + LG+ +GI DL V+ + + + G T
Sbjct 118 QYVDVNASQIFTGDIHDAPARKVFHRLQLGVVPLGKLMGIPDLDVSN-KADISPRGGWET 176
Query 156 ESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGP---DTADQ 212
E+ +F GTP R +V++ V R + + P V+ GP +
Sbjct 177 EA--------IFRGTPK----GFRAPAIVEMKV-RIKRGDVYLRPVTVIEGPVNKKEGAE 223
Query 213 PVPDDKRD-----AVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISLDEF 267
VP D+ D A++ F K+ +PF +P V G V IE T+S+ +
Sbjct 224 IVPADQLDEATTAALMDGFRLKIEKDSIPFPGIPMRVYVGGGSVFIEAEDYYTTVSIGDL 283
>gi|337291494|ref|YP_004630515.1| hypothetical protein CULC22_01891 [Corynebacterium ulcerans BR-AD22]
gi|334699800|gb|AEG84596.1| putative secreted protein [Corynebacterium ulcerans BR-AD22]
Length=262
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/256 (27%), Positives = 109/256 (43%), Gaps = 22/256 (8%)
Query 13 AAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYA 72
A I + LI G D + AE+R+S VR A+L +P V + FP++
Sbjct 15 AGIALISLIAALWGVDAAIAARAEHRISHDVRNNAHLDQNPSVYLGGFPYVGALFSGKVP 74
Query 73 ELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRII-IDSMHLGR 131
L + VE G T + + ++L+ S L D + +L +R + D++ +G+
Sbjct 75 GLGVSVSDVEVNDFGLLTTSSQVTDMELNR-SQLFSGDVEGTHAQLLTRTVGFDAVAVGK 133
Query 132 YLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASD 191
L I DL ++ P S GT S + GTP F+ V+V+ + +
Sbjct 134 QLNILDLDLSNPYDVS---PAGTNSSEVQ------LRGTP--DGFSKPVTVIATMRL--- 179
Query 192 DRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDV 251
+ T +TPT VV D + + D A+ AF L + LP + V G +
Sbjct 180 EGPTFKLTPTTVV---DRGESNLDD---SALFRAFTWTLNTKTLPINAQASYVYLAGGSI 233
Query 252 IIEGITRGVTISLDEF 267
E R VT+ L++
Sbjct 234 RFEAQERNVTLRLEDL 249
>gi|334697519|gb|AEG82316.1| putative secreted protein [Corynebacterium ulcerans 809]
Length=262
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/256 (27%), Positives = 109/256 (43%), Gaps = 22/256 (8%)
Query 13 AAIVVAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYA 72
A I + LI G D + AE+R+S VR A+L +P V + FP++
Sbjct 15 AGIALISLIAALWGVDATIAARAEHRISHDVRNNAHLDQNPSVYLGGFPYVGALFSGKVP 74
Query 73 ELEIKAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRII-IDSMHLGR 131
L + VE G T + + ++L+ S L D + +L +R + D++ +G+
Sbjct 75 GLGVSVSDVEVNDFGLLTTSSQVTDMELNR-SQLFSGDVEGTHAQLLTRTVGFDAVAVGK 133
Query 132 YLGISDLMVAAPRQESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASD 191
L I DL ++ P S GT S + GTP F+ V+V+ + +
Sbjct 134 QLNILDLDLSNPYDVS---PAGTNSSEVQ------LRGTP--DGFSKPVTVIATMRL--- 179
Query 192 DRATLVITPTAVVTGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDV 251
+ T +TPT VV D + + D A+ AF L + LP + V G +
Sbjct 180 EGPTFKLTPTTVV---DRGESNLDD---SALFRAFTWTLNTKTLPINAQASYVYLAGGSI 233
Query 252 IIEGITRGVTISLDEF 267
E R VT+ L++
Sbjct 234 RFEAQERNVTLRLEDL 249
>gi|227833980|ref|YP_002835687.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|262183531|ref|ZP_06042952.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
gi|227454996|gb|ACP33749.1| putative secreted protein [Corynebacterium aurimucosum ATCC 700975]
Length=278
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/155 (32%), Positives = 77/155 (50%), Gaps = 19/155 (12%)
Query 17 VAVLIVGAVGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEI 76
VA +++ A AD +++AE+ ++ + ++ L + P V I PF A + LE+
Sbjct 16 VAGVVLTAWLADSAVAMHAEHTVAQQAKTSSQLENTPNVYIGGVPFTLGAFTKEIPYLEV 75
Query 77 KAFAVEHAGSGTATLEATMHSIDLSYASWLIRPDAKLPVGELES--------RIIIDSMH 128
K+ VE G T+ I IRP+ +L GELE I +D +
Sbjct 76 KSSDVEVPKLGMVNASTTLRDI-------TIRPE-QLFSGELEGSPVSTYTRSISLDGVA 127
Query 129 LGRYLGISDLMVAAPRQESNDATGGTT-ESGISGS 162
LGR LGI+DL +A P S TGGT+ E+ ++G+
Sbjct 128 LGRMLGITDLSIANPDDMS--PTGGTSAEAELTGT 160
>gi|68535440|ref|YP_250145.1| putative secreted protein [Corynebacterium jeikeium K411]
gi|68263039|emb|CAI36527.1| putative secreted protein [Corynebacterium jeikeium K411]
Length=272
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (24%), Positives = 104/245 (43%), Gaps = 29/245 (11%)
Query 35 AEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSGTATLEAT 94
AE+++S + +NL + P V + FP+ A+ + + A V+ G G +++ +
Sbjct 30 AEHKISEALYADSNLANPPKVQVAGFPYTGAALSHELQAVTVVANDVDVPGFGLMSVQTS 89
Query 95 MHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQESNDAT--- 151
I +S P ++ +R+ +D + LG + I L + Q +D +
Sbjct 90 AQYITVSADDVFNGTIENAPARKVFTRLQLDGVLLGNRMDIEALQI----QNLDDISPRG 145
Query 152 GGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGPDTAD 211
G TE+ +F G P FA V V L + + T+ ITP +++ PD D
Sbjct 146 GWETEA--------IFEGKP--KGFAKPARVEVKLRIVA---GTMRITPLKILSAPDGLD 192
Query 212 ---QPVPDDK------RDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTI 262
+ V D+ D ++ AF+ +P ++LP P + G V +E I
Sbjct 193 IKAKDVTDEAALDGAIADRIIDAFSLSIPGKELPMRGNPERIYVSGGSVFVETSKVYTKI 252
Query 263 SLDEF 267
SL +
Sbjct 253 SLSDL 257
>gi|260578348|ref|ZP_05846263.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
gi|258603529|gb|EEW16791.1| secreted protein [Corynebacterium jeikeium ATCC 43734]
Length=272
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/245 (24%), Positives = 104/245 (43%), Gaps = 29/245 (11%)
Query 35 AEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYAELEIKAFAVEHAGSGTATLEAT 94
AE+++S + +NL + P V + FP+ A+ + + A V+ G G +++ +
Sbjct 30 AEHKISEALYADSNLANPPKVQVAGFPYTGAALSHELQAVTVVANDVDVPGFGLMSVQTS 89
Query 95 MHSIDLSYASWLIRPDAKLPVGELESRIIIDSMHLGRYLGISDLMVAAPRQESNDAT--- 151
I +S P ++ +R+ +D + LG + I L + Q +D +
Sbjct 90 AQYITVSADDVFNGTIENAPARKVFTRLQLDGVLLGNRMDIEALQI----QNLDDISPRG 145
Query 152 GGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVVTGPDTAD 211
G TE+ +F G P FA V V L + + T+ ITP +++ PD D
Sbjct 146 GWETEA--------IFEGKP--KGFAKPAKVEVKLRIVA---GTMKITPLKILSAPDGLD 192
Query 212 ---QPVPDDK------RDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTI 262
+ V D+ D ++ AF+ +P ++LP P V G + +E I
Sbjct 193 IKAKDVTDESALDGAIADRIIDAFSLSIPGKELPMRGDPERVYVSGGSLFVETSKVYTKI 252
Query 263 SLDEF 267
SL +
Sbjct 253 SLSDL 257
>gi|296118893|ref|ZP_06837466.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
gi|295967991|gb|EFG81243.1| putative secreted protein [Corynebacterium ammoniagenes DSM 20306]
Length=274
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/243 (27%), Positives = 104/243 (43%), Gaps = 32/243 (13%)
Query 28 DFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQA-MREHYAEL-EIKAFAVEHAG 85
D G +++AE+ L+ V+ A L + P V I P++ A + +H L E+KA +E
Sbjct 45 DTGFAMHAEHTLAQQVKAEAQLENTPQVYIGGMPYLGAAVLPDHEIPLMEVKALDIEVPR 104
Query 86 SGTATLEATMHSIDLSYASWLIRPDAKLPVGELESRII-IDSMHLGRYLGISDLMVAAPR 144
G T+ + ++ A LI + SR I +D++ LGR +GI+DL +A P+
Sbjct 105 LGLVNASTTLRDVQVT-ADQLISGNFTGATVSTWSRAISVDAVSLGRLMGINDLQIANPK 163
Query 145 QESNDATGGTTESGISGSRGLVFSGTPISANFAHRVSVLVDLSVASDDRATLVITPTAVV 204
S T GT+ I GT + V V + L D+R ++TP
Sbjct 164 NIS--PTSGTSAEAI-------LEGTLPGDTESTSVEVTLRL---VDER--FIMTPV--- 206
Query 205 TGPDTADQPVPDDKRDAVLHAFASKLPNQKLPFGVVPNTVGARGSDVIIEGITRGVTISL 264
AD D V AF+ L ++LP V +G + E R ++ +
Sbjct 207 ----NADN-------DRVAEAFSYSLDTRQLPLSAQATAVRLQGGSITFETQHRNTSLEV 255
Query 265 DEF 267
+
Sbjct 256 SQL 258
>gi|256380807|ref|YP_003104467.1| hypothetical protein Amir_6825 [Actinosynnema mirum DSM 43827]
gi|255925110|gb|ACU40621.1| hypothetical protein Amir_6825 [Actinosynnema mirum DSM 43827]
Length=268
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/69 (40%), Positives = 39/69 (57%), Gaps = 2/69 (2%)
Query 15 IVVAVLIVGA--VGADFGASIYAEYRLSTTVRKAANLRSDPFVAILRFPFIPQAMREHYA 72
+V+ L++G V ADFG + EY+++ +R L DP V I FPFI QA+ Y
Sbjct 15 LVITALVLGGLLVAADFGLAAAGEYQVAQRMRDKLQLSEDPAVRINGFPFITQALGGDYR 74
Query 73 ELEIKAFAV 81
++EI A V
Sbjct 75 DIEITANGV 83
Lambda K H
0.318 0.134 0.378
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 416743905326
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40