BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0825c
Length=213
Score E
Sequences producing significant alignments: (Bits) Value
gi|15840238|ref|NP_335275.1| hypothetical protein MT0847 [Mycoba... 438 2e-121
gi|15607965|ref|NP_215340.1| hypothetical protein Rv0825c [Mycob... 435 2e-120
gi|253797772|ref|YP_003030773.1| hypothetical protein TBMG_00839... 434 4e-120
gi|297633337|ref|ZP_06951117.1| hypothetical protein MtubK4_0440... 432 1e-119
gi|254549797|ref|ZP_05140244.1| hypothetical protein Mtube_04926... 432 1e-119
gi|289744549|ref|ZP_06503927.1| conserved hypothetical protein [... 432 2e-119
gi|289446389|ref|ZP_06436133.1| conserved hypothetical protein [... 431 3e-119
gi|339630891|ref|YP_004722533.1| hypothetical protein MAF_08350 ... 430 8e-119
gi|323720749|gb|EGB29821.1| hypothetical protein TMMG_03882 [Myc... 405 2e-111
gi|339297481|gb|AEJ49591.1| hypothetical protein CCDC5180_0754 [... 402 2e-110
gi|289573452|ref|ZP_06453679.1| conserved hypothetical protein [... 385 2e-105
gi|118616292|ref|YP_904624.1| hypothetical protein MUL_0446 [Myc... 367 8e-100
gi|183984823|ref|YP_001853114.1| hypothetical protein MMAR_4855 ... 364 6e-99
gi|240171882|ref|ZP_04750541.1| hypothetical protein MkanA1_2138... 354 5e-96
gi|167967513|ref|ZP_02549790.1| hypothetical protein MtubH3_0553... 345 3e-93
gi|41406757|ref|NP_959593.1| hypothetical protein MAP0659c [Myco... 340 1e-91
gi|118463319|ref|YP_880046.1| hypothetical protein MAV_0773 [Myc... 320 7e-86
gi|254820534|ref|ZP_05225535.1| hypothetical protein MintA_11426... 319 1e-85
gi|342860305|ref|ZP_08716956.1| hypothetical protein MCOL_15561 ... 317 8e-85
gi|296166413|ref|ZP_06848845.1| TetR family transcriptional regu... 315 3e-84
gi|108801473|ref|YP_641670.1| TetR family transcriptional regula... 312 3e-83
gi|118471962|ref|YP_889997.1| hypothetical protein MSMEG_5768 [M... 305 3e-81
gi|333992165|ref|YP_004524779.1| hypothetical protein JDM601_352... 291 4e-77
gi|120406032|ref|YP_955861.1| TetR family transcriptional regula... 282 2e-74
gi|145222261|ref|YP_001132939.1| TetR family transcriptional reg... 265 4e-69
gi|169627857|ref|YP_001701506.1| hypothetical protein MAB_0756c ... 206 1e-51
gi|325675613|ref|ZP_08155297.1| TetR family transcriptional regu... 198 4e-49
gi|111023231|ref|YP_706203.1| hypothetical protein RHA1_ro06268 ... 186 2e-45
gi|312140747|ref|YP_004008083.1| tetr family transcriptional reg... 179 2e-43
gi|226365738|ref|YP_002783521.1| TetR family transcriptional reg... 176 2e-42
gi|229489674|ref|ZP_04383537.1| transcriptional regulator, TetR ... 175 4e-42
gi|300786892|ref|YP_003767183.1| TetR family transcriptional reg... 174 6e-42
gi|226305584|ref|YP_002765544.1| TetR family transcriptional reg... 174 7e-42
gi|296138341|ref|YP_003645584.1| TetR family transcriptional reg... 153 1e-35
gi|302527629|ref|ZP_07279971.1| conserved hypothetical protein [... 149 2e-34
gi|333920415|ref|YP_004493996.1| TetR family transcriptional reg... 146 2e-33
gi|257056271|ref|YP_003134103.1| transcriptional regulator [Sacc... 145 4e-33
gi|284046847|ref|YP_003397187.1| TetR family transcriptional reg... 139 3e-31
gi|169628564|ref|YP_001702213.1| hypothetical protein MAB_1473c ... 132 2e-29
gi|333918262|ref|YP_004491843.1| TetR family transcriptional reg... 123 1e-26
gi|239986014|ref|ZP_04706678.1| TetR family transcriptional regu... 120 1e-25
gi|54024532|ref|YP_118774.1| putative transcriptional regulator ... 119 3e-25
gi|326780863|ref|ZP_08240128.1| regulatory protein TetR [Strepto... 119 4e-25
gi|343926256|ref|ZP_08765765.1| putative TetR family transcripti... 111 7e-23
gi|229488501|ref|ZP_04382367.1| transcriptional regulator, TetR ... 108 4e-22
gi|226308148|ref|YP_002768108.1| TetR family transcriptional reg... 108 7e-22
gi|229491713|ref|ZP_04385534.1| transcriptional regulator, TetR ... 107 1e-21
gi|182440199|ref|YP_001827918.1| TetR family transcriptional reg... 106 3e-21
gi|226308996|ref|YP_002768956.1| TetR family transcriptional reg... 106 3e-21
gi|229492962|ref|ZP_04386757.1| transcriptional regulator, TetR ... 103 1e-20
>gi|15840238|ref|NP_335275.1| hypothetical protein MT0847 [Mycobacterium tuberculosis CDC1551]
gi|13880396|gb|AAK45089.1| hypothetical protein MT0847 [Mycobacterium tuberculosis CDC1551]
Length=239
Score = 438 bits (1127), Expect = 2e-121, Method: Compositional matrix adjust.
Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE
Sbjct 27 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 86
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 87 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 146
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 147 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 206
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 207 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 239
>gi|15607965|ref|NP_215340.1| hypothetical protein Rv0825c [Mycobacterium tuberculosis H37Rv]
gi|31792013|ref|NP_854506.1| hypothetical protein Mb0848c [Mycobacterium bovis AF2122/97]
gi|121636749|ref|YP_976972.1| hypothetical protein BCG_0878c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
56 more sequence titles
Length=213
Score = 435 bits (1119), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 212/213 (99%), Positives = 213/213 (100%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|253797772|ref|YP_003030773.1| hypothetical protein TBMG_00839 [Mycobacterium tuberculosis KZN
1435]
gi|289553082|ref|ZP_06442292.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|253319275|gb|ACT23878.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289437714|gb|EFD20207.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
605]
gi|328457551|gb|AEB02974.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length=219
Score = 434 bits (1116), Expect = 4e-120, Method: Compositional matrix adjust.
Identities = 212/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGL ERYFYE
Sbjct 7 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLRERYFYE 66
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 67 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 126
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 127 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 186
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 187 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 219
>gi|297633337|ref|ZP_06951117.1| hypothetical protein MtubK4_04401 [Mycobacterium tuberculosis
KZN 4207]
gi|297730321|ref|ZP_06959439.1| hypothetical protein MtubKR_04476 [Mycobacterium tuberculosis
KZN R506]
gi|313657646|ref|ZP_07814526.1| hypothetical protein MtubKV_04456 [Mycobacterium tuberculosis
KZN V2475]
gi|344218650|gb|AEM99280.1| hypothetical protein MTCTRI2_0842 [Mycobacterium tuberculosis
CTRI-2]
Length=213
Score = 432 bits (1112), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGL ERYFYE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLRERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|254549797|ref|ZP_05140244.1| hypothetical protein Mtube_04926 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=213
Score = 432 bits (1112), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTV AVCRHAGLTERYFYE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVGAVCRHAGLTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|289744549|ref|ZP_06503927.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289756912|ref|ZP_06516290.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|294996305|ref|ZP_06801996.1| hypothetical protein Mtub2_17821 [Mycobacterium tuberculosis
210]
gi|289685077|gb|EFD52565.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289712476|gb|EFD76488.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|339293841|gb|AEJ45952.1| hypothetical protein CCDC5079_0762 [Mycobacterium tuberculosis
CCDC5079]
Length=213
Score = 432 bits (1110), Expect = 2e-119, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREH VRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHCVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|289446389|ref|ZP_06436133.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289419347|gb|EFD16548.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=213
Score = 431 bits (1109), Expect = 3e-119, Method: Compositional matrix adjust.
Identities = 211/213 (99%), Positives = 212/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DY VNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYGVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|339630891|ref|YP_004722533.1| hypothetical protein MAF_08350 [Mycobacterium africanum GM041182]
gi|339330247|emb|CCC25907.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
Length=213
Score = 430 bits (1105), Expect = 8e-119, Method: Compositional matrix adjust.
Identities = 210/213 (99%), Positives = 211/213 (99%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTER YE
Sbjct 1 MQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERCLYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
>gi|323720749|gb|EGB29821.1| hypothetical protein TMMG_03882 [Mycobacterium tuberculosis CDC1551A]
Length=199
Score = 405 bits (1042), Expect = 2e-111, Method: Compositional matrix adjust.
Identities = 198/199 (99%), Positives = 199/199 (100%), Gaps = 0/199 (0%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+ESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD
Sbjct 1 MESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 60
Query 75 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 134
DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE
Sbjct 61 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 120
Query 135 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 194
LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY
Sbjct 121 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 180
Query 195 APHRERGESEHSIPAGPHN 213
APHRERGESEHSIPAGPHN
Sbjct 181 APHRERGESEHSIPAGPHN 199
>gi|339297481|gb|AEJ49591.1| hypothetical protein CCDC5180_0754 [Mycobacterium tuberculosis
CCDC5180]
Length=199
Score = 402 bits (1033), Expect = 2e-110, Method: Compositional matrix adjust.
Identities = 197/199 (99%), Positives = 198/199 (99%), Gaps = 0/199 (0%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+ESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREH VRAVYD
Sbjct 1 MESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHCVRAVYD 60
Query 75 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 134
DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE
Sbjct 61 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 120
Query 135 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 194
LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY
Sbjct 121 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 180
Query 195 APHRERGESEHSIPAGPHN 213
APHRERGESEHSIPAGPHN
Sbjct 181 APHRERGESEHSIPAGPHN 199
>gi|289573452|ref|ZP_06453679.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289537883|gb|EFD42461.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=215
Score = 385 bits (990), Expect = 2e-105, Method: Compositional matrix adjust.
Identities = 188/188 (100%), Positives = 188/188 (100%), Gaps = 0/188 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE
Sbjct 28 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 87
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA
Sbjct 88 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 147
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI
Sbjct 148 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 207
Query 181 DYCVNMLL 188
DYCVNMLL
Sbjct 208 DYCVNMLL 215
>gi|118616292|ref|YP_904624.1| hypothetical protein MUL_0446 [Mycobacterium ulcerans Agy99]
gi|118568402|gb|ABL03153.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=213
Score = 367 bits (941), Expect = 8e-100, Method: Compositional matrix adjust.
Identities = 174/213 (82%), Positives = 193/213 (91%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+Q GQ RGRW+GVPLE RHA+RRD L+AAGVQLLG GPALTVRAVCR A LTERYFYE
Sbjct 1 MQAGQRRGRWTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCRQAALTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SF+DR+HFVRAVYDDVCTRAMATL SA TPR+AVE+FV LMVDDPVRGRVLLLAPAVEP
Sbjct 61 SFSDRDHFVRAVYDDVCTRAMATLMSANTPRDAVERFVALMVDDPVRGRVLLLAPAVEPV 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGA+WMPNFI+LLQRKLS+I DPVLQKLVATSLIGALTGLFTAYLNG+LGATR+QFI
Sbjct 121 LTRSGADWMPNFIDLLQRKLSQIADPVLQKLVATSLIGALTGLFTAYLNGQLGATRQQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCV++LL TAA YAPHR+RGE+EH + A H+
Sbjct 181 DYCVDLLLGTAAAYAPHRDRGEAEHPVAARQHD 213
>gi|183984823|ref|YP_001853114.1| hypothetical protein MMAR_4855 [Mycobacterium marinum M]
gi|183178149|gb|ACC43259.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=213
Score = 364 bits (934), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 173/213 (82%), Positives = 192/213 (91%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+Q GQ RGRW+GVPLE RHA+RRD L+AAGVQLLG GPALTVRAVCR A LTERYFYE
Sbjct 1 MQAGQRRGRWTGVPLEDRHAVRRDTLIAAGVQLLGEEAGPALTVRAVCRQAALTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SF+DR+HFVRAVYDDVCTRAMATL SA TPR+AVE+FV LMVDDPVRGRVLLLAPAVEP
Sbjct 61 SFSDRDHFVRAVYDDVCTRAMATLMSANTPRDAVERFVALMVDDPVRGRVLLLAPAVEPV 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGA+WMPNFI+LLQRKLS+I DPVLQKLVATSLIGALTGLFTAYLNG+LGATR+QFI
Sbjct 121 LTRSGADWMPNFIDLLQRKLSQIADPVLQKLVATSLIGALTGLFTAYLNGQLGATRQQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCV++LL TAA YAPHR+RGE+E + A H+
Sbjct 181 DYCVDLLLGTAAAYAPHRDRGEAERPVAARQHD 213
>gi|240171882|ref|ZP_04750541.1| hypothetical protein MkanA1_21380 [Mycobacterium kansasii ATCC
12478]
Length=213
Score = 354 bits (908), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 172/213 (81%), Positives = 187/213 (88%), Gaps = 0/213 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+Q GQ RGRW+GVPLE RHA+RR+NL+AAGVQLLG GPALTVRAVCR A LTERYFYE
Sbjct 1 MQAGQKRGRWTGVPLEDRHAVRRENLIAAGVQLLGEKDGPALTVRAVCRKAALTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SF DREHFVRAVYDDVCTRAMATL SA T REAVE+FV LMVDDPVRGRVLLLAP VEP
Sbjct 61 SFTDREHFVRAVYDDVCTRAMATLMSAHTAREAVERFVALMVDDPVRGRVLLLAPTVEPV 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFIELLQRKLSRIVDPV+QKLVATSLIGALTGLFTAYLNG+LGATR+QFI
Sbjct 121 LTRSGAEWMPNFIELLQRKLSRIVDPVVQKLVATSLIGALTGLFTAYLNGQLGATRQQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
DYCV+MLL+ AA++ PHR E+ H A P +
Sbjct 181 DYCVDMLLNAAASHVPHRPGQEAGHPAAARPRD 213
>gi|167967513|ref|ZP_02549790.1| hypothetical protein MtubH3_05537 [Mycobacterium tuberculosis
H37Ra]
Length=167
Score = 345 bits (884), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 166/167 (99%), Positives = 167/167 (100%), Gaps = 0/167 (0%)
Query 47 VCRHAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPV 106
+CRHAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPV
Sbjct 1 MCRHAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPV 60
Query 107 RGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTA 166
RGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTA
Sbjct 61 RGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTA 120
Query 167 YLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 213
YLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN
Sbjct 121 YLNGRLGATRKQFIDYCVNMLLSTAATYAPHRERGESEHSIPAGPHN 167
>gi|41406757|ref|NP_959593.1| hypothetical protein MAP0659c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395107|gb|AAS02976.1| hypothetical protein MAP_0659c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336458345|gb|EGO37324.1| hypothetical protein MAPs_14480 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=204
Score = 340 bits (871), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 165/204 (81%), Positives = 180/204 (89%), Gaps = 0/204 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+QTGQ RGRW+GVPLESR ALRRDNL+ AGVQLLGG+GGPALTVRAVCR A LTERYFYE
Sbjct 1 MQTGQRRGRWTGVPLESRLALRRDNLINAGVQLLGGSGGPALTVRAVCRKAALTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SF DR+ FVRAVYDDVCTRAM TLTSA TPREAVE+FVELMVDDPVRGRVLLLAPAVEP
Sbjct 61 SFTDRDEFVRAVYDDVCTRAMNTLTSATTPREAVERFVELMVDDPVRGRVLLLAPAVEPV 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LTRSGAEWMPNFI+LLQRKLSRI D VLQK++ATSL+G L+ LFTAYL+G+LGATRKQFI
Sbjct 121 LTRSGAEWMPNFIDLLQRKLSRIGDAVLQKMIATSLVGGLSSLFTAYLHGQLGATRKQFI 180
Query 181 DYCVNMLLSTAATYAPHRERGESE 204
DYC NML TAA Y E G+ +
Sbjct 181 DYCTNMLYITAAPYVSAGELGKPQ 204
>gi|118463319|ref|YP_880046.1| hypothetical protein MAV_0773 [Mycobacterium avium 104]
gi|254773710|ref|ZP_05215226.1| hypothetical protein MaviaA2_03407 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164606|gb|ABK65503.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=192
Score = 320 bits (821), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 156/192 (82%), Positives = 170/192 (89%), Gaps = 0/192 (0%)
Query 13 VPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAV 72
+PLESR ALRRDNL+ AGVQLLGG+GGPALTVRAVCR A LTERYFYESF DR+ FVRAV
Sbjct 1 MPLESRLALRRDNLINAGVQLLGGSGGPALTVRAVCRKAALTERYFYESFTDRDEFVRAV 60
Query 73 YDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNF 132
YDDVCTRAM TLTSA TPREAVE+FVELMVDDPVRGRVLLLAPAVEP LTRSGAEWMPNF
Sbjct 61 YDDVCTRAMNTLTSATTPREAVERFVELMVDDPVRGRVLLLAPAVEPVLTRSGAEWMPNF 120
Query 133 IELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAA 192
I+LLQRKLSRI D VLQK++ATSL+G L+ LFTAYL+G+LGATRKQFIDYC NML TAA
Sbjct 121 IDLLQRKLSRIGDAVLQKMIATSLVGGLSSLFTAYLHGQLGATRKQFIDYCTNMLYITAA 180
Query 193 TYAPHRERGESE 204
Y E G+S+
Sbjct 181 PYVSAGELGKSQ 192
>gi|254820534|ref|ZP_05225535.1| hypothetical protein MintA_11426 [Mycobacterium intracellulare
ATCC 13950]
Length=190
Score = 319 bits (818), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/190 (82%), Positives = 171/190 (90%), Gaps = 0/190 (0%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+ESR ALRRDNL++AGVQLLGG+GGPALTVRAVCR A LTERYFYESFADR+ FVRAVYD
Sbjct 1 MESRLALRRDNLISAGVQLLGGSGGPALTVRAVCRKAALTERYFYESFADRDEFVRAVYD 60
Query 75 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 134
DVCTRAM TLTSA TPREAVE+FVELMVDDPVRGRVLLLAPAVEP L RSGAEWMPNFI+
Sbjct 61 DVCTRAMNTLTSATTPREAVERFVELMVDDPVRGRVLLLAPAVEPVLVRSGAEWMPNFID 120
Query 135 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 194
LLQRKLSRI D VLQK++ATSL+G L+ LFTAYL+G+LGATR+QFIDYC+NML TAA Y
Sbjct 121 LLQRKLSRIGDAVLQKMIATSLVGGLSSLFTAYLHGQLGATRRQFIDYCINMLYITAAPY 180
Query 195 APHRERGESE 204
P E G+S+
Sbjct 181 VPAGELGKSQ 190
>gi|342860305|ref|ZP_08716956.1| hypothetical protein MCOL_15561 [Mycobacterium colombiense CECT
3035]
gi|342131960|gb|EGT85201.1| hypothetical protein MCOL_15561 [Mycobacterium colombiense CECT
3035]
Length=190
Score = 317 bits (812), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 155/190 (82%), Positives = 169/190 (89%), Gaps = 0/190 (0%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+ESR ALRRDNL++AGVQLLG GGPALTVRAVCR A LTERYFYESFADR+ FVRAVYD
Sbjct 1 MESRLALRRDNLISAGVQLLGSPGGPALTVRAVCREAALTERYFYESFADRDEFVRAVYD 60
Query 75 DVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIE 134
DVCTRAM TLTSA TPREAVE+FVELMVDDPV GRVLLLAPAVEP LTRSGAEWMPNFI+
Sbjct 61 DVCTRAMNTLTSATTPREAVERFVELMVDDPVGGRVLLLAPAVEPVLTRSGAEWMPNFID 120
Query 135 LLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATY 194
LLQRKLSRI D VLQK++ATSLIG L+ LFTAYL+G+LGATRKQFIDYC+NML TAA Y
Sbjct 121 LLQRKLSRIGDAVLQKMIATSLIGGLSSLFTAYLHGQLGATRKQFIDYCINMLYITAAPY 180
Query 195 APHRERGESE 204
P E G+S+
Sbjct 181 VPAGELGKSQ 190
>gi|296166413|ref|ZP_06848845.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898174|gb|EFG77748.1| TetR family transcriptional regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=187
Score = 315 bits (807), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 155/185 (84%), Positives = 164/185 (89%), Gaps = 0/185 (0%)
Query 17 SRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYDDV 76
R ALRRDNL+AAGVQLLGG G PALTVRAVCR A LTERYFYESFADR+ FVRAVYDDV
Sbjct 3 DRLALRRDNLIAAGVQLLGGDGRPALTVRAVCRKAALTERYFYESFADRDEFVRAVYDDV 62
Query 77 CTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELL 136
CTRAM TLTSA TPREAVE+FVELMVDDPVRGRVLLLAPAVEP LTRSGAEWMPNFI LL
Sbjct 63 CTRAMNTLTSATTPREAVEKFVELMVDDPVRGRVLLLAPAVEPILTRSGAEWMPNFIALL 122
Query 137 QRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLSTAATYAP 196
QRKLSRI DPVLQK++ATSLIG L+ LFTAYLNG+LGA+RKQFIDYCVNML TAA Y P
Sbjct 123 QRKLSRIGDPVLQKMIATSLIGGLSSLFTAYLNGQLGASRKQFIDYCVNMLYITAAPYVP 182
Query 197 HRERG 201
+ G
Sbjct 183 TPDLG 187
>gi|108801473|ref|YP_641670.1| TetR family transcriptional regulator [Mycobacterium sp. MCS]
gi|119870626|ref|YP_940578.1| TetR family transcriptional regulator [Mycobacterium sp. KMS]
gi|126437458|ref|YP_001073149.1| TetR family transcriptional regulator [Mycobacterium sp. JLS]
gi|108771892|gb|ABG10614.1| transcriptional regulator, TetR family [Mycobacterium sp. MCS]
gi|119696715|gb|ABL93788.1| transcriptional regulator, TetR family [Mycobacterium sp. KMS]
gi|126237258|gb|ABO00659.1| transcriptional regulator, TetR family [Mycobacterium sp. JLS]
Length=194
Score = 312 bits (799), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 146/194 (76%), Positives = 168/194 (87%), Gaps = 0/194 (0%)
Query 1 VQTGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYE 60
+ +GQ RGRWSGVPL+ R ALRRD LV AGV+LLGG GGPALTVRAVCR AGLTERYFYE
Sbjct 1 MSSGQRRGRWSGVPLQDRQALRRDELVTAGVKLLGGEGGPALTVRAVCREAGLTERYFYE 60
Query 61 SFADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
SF DR+ FVRA YDDVC+RAM+ L +A+TPR+AVE+FV+LMVDDP RGRVLLLAPA EP
Sbjct 61 SFVDRDEFVRAAYDDVCSRAMSALMTAETPRDAVERFVKLMVDDPTRGRVLLLAPASEPV 120
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
LT+SGA WMPNFIEL+Q KL+RI DP +Q +VAT LIGALT LFTAYL+GRL ATR+QFI
Sbjct 121 LTQSGAAWMPNFIELVQHKLTRITDPAIQAMVATGLIGALTALFTAYLDGRLSATREQFI 180
Query 181 DYCVNMLLSTAATY 194
DYCV+MLLS A++
Sbjct 181 DYCVDMLLSRVASH 194
>gi|118471962|ref|YP_889997.1| hypothetical protein MSMEG_5768 [Mycobacterium smegmatis str.
MC2 155]
gi|118173249|gb|ABK74145.1| conserved hypothetical protein [Mycobacterium smegmatis str.
MC2 155]
Length=194
Score = 305 bits (780), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 147/192 (77%), Positives = 162/192 (85%), Gaps = 0/192 (0%)
Query 3 TGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESF 62
+GQ RGRWSGVPL R ALRRD L+AAGV+LLG A GPALTVRAVCR AGLTERYFYE F
Sbjct 3 SGQRRGRWSGVPLRERTALRRDELIAAGVKLLGAADGPALTVRAVCREAGLTERYFYECF 62
Query 63 ADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALT 122
DR+ FVRAVYDDVC AM+ LT+A TPR+AVEQFV LMVDDP RGRVLLLAP EP LT
Sbjct 63 NDRDGFVRAVYDDVCATAMSALTAADTPRKAVEQFVSLMVDDPTRGRVLLLAPESEPVLT 122
Query 123 RSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDY 182
RSGAEWMPNFI+LLQRKL+RI DPV Q +VATSLIGALT LFTAYLN RL ATR+QFID+
Sbjct 123 RSGAEWMPNFIDLLQRKLTRIADPVRQAMVATSLIGALTALFTAYLNDRLPATREQFIDF 182
Query 183 CVNMLLSTAATY 194
CV+MLL ++
Sbjct 183 CVDMLLGRVGSF 194
>gi|333992165|ref|YP_004524779.1| hypothetical protein JDM601_3525 [Mycobacterium sp. JDM601]
gi|333488133|gb|AEF37525.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=204
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 141/189 (75%), Positives = 155/189 (83%), Gaps = 0/189 (0%)
Query 3 TGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESF 62
+GQ RGRWSGVPL R ALRRD + AGV LLG GP LT+R++CR A LTERYFYESF
Sbjct 3 SGQRRGRWSGVPLAERPALRRDEFIEAGVGLLGDENGPTLTIRSLCRAAALTERYFYESF 62
Query 63 ADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALT 122
DR+ FVRAVYDDVCTRAM TL SAQTPR AVE FV LMVDDPVRGRVLLLAPA EP LT
Sbjct 63 TDRDEFVRAVYDDVCTRAMTTLLSAQTPRAAVEAFVTLMVDDPVRGRVLLLAPATEPVLT 122
Query 123 RSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDY 182
SGA+WMPNFI +LQRKL+RI DP LQ +VAT LIGALT LF+AYL GRL ATR QFID+
Sbjct 123 HSGAQWMPNFIGMLQRKLTRIGDPPLQHMVATGLIGALTALFSAYLEGRLAATRSQFIDF 182
Query 183 CVNMLLSTA 191
CV+MLL+T
Sbjct 183 CVDMLLNTG 191
>gi|120406032|ref|YP_955861.1| TetR family transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119958850|gb|ABM15855.1| transcriptional regulator, TetR family [Mycobacterium vanbaalenii
PYR-1]
Length=193
Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/191 (70%), Positives = 156/191 (82%), Gaps = 0/191 (0%)
Query 3 TGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESF 62
+GQ RGRWSGVPL+ R ALRRD L+ AG+ LLG GGP LTVRAVC+ AGLTERYFYESF
Sbjct 3 SGQRRGRWSGVPLQDRQALRRDELITAGISLLGSPGGPHLTVRAVCKAAGLTERYFYESF 62
Query 63 ADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALT 122
DR+ +V AVYD+VCT AM+TL + + R+AVE+FV LM+DDP RGRVLLLAP VEP L
Sbjct 63 TDRDEYVAAVYDNVCTAAMSTLMKSDSMRDAVERFVALMIDDPARGRVLLLAPEVEPVLA 122
Query 123 RSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDY 182
RSGA WMPNFI+LLQR L++I DP Q +VAT LIGALT LFTAYL+GRLGATR++FID+
Sbjct 123 RSGARWMPNFIDLLQRNLTQISDPTTQAMVATGLIGALTALFTAYLDGRLGATRERFIDH 182
Query 183 CVNMLLSTAAT 193
C +LLS A T
Sbjct 183 CAELLLSRAVT 193
>gi|145222261|ref|YP_001132939.1| TetR family transcriptional regulator [Mycobacterium gilvum PYR-GCK]
gi|315442691|ref|YP_004075570.1| TetR family transcriptional regulator [Mycobacterium sp. Spyr1]
gi|145214747|gb|ABP44151.1| transcriptional regulator, TetR family [Mycobacterium gilvum
PYR-GCK]
gi|315260994|gb|ADT97735.1| transcriptional regulator, TetR family [Mycobacterium sp. Spyr1]
Length=193
Score = 265 bits (676), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/191 (71%), Positives = 154/191 (81%), Gaps = 0/191 (0%)
Query 3 TGQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESF 62
+GQ RGRWSGVPL+ R ALRRD L+ AG+ LLG +GGP LTVRAVC+ AGLTERYFYESF
Sbjct 3 SGQRRGRWSGVPLQDRQALRRDELITAGIGLLGSSGGPNLTVRAVCKAAGLTERYFYESF 62
Query 63 ADREHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALT 122
DR+ +V AVYDDVCT AMATL +++ R+AVE+FV LM+DDP RGRVLLLAP EP L
Sbjct 63 TDRDEYVAAVYDDVCTAAMATLRESESMRDAVERFVALMIDDPARGRVLLLAPEAEPVLA 122
Query 123 RSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDY 182
RSGA WMPNFIELLQ L+RI D Q +VAT LIGALT LFTAYL+GRL ATR+QFID+
Sbjct 123 RSGARWMPNFIELLQHNLTRITDTTTQAMVATGLIGALTALFTAYLDGRLEATREQFIDH 182
Query 183 CVNMLLSTAAT 193
C +LLS A T
Sbjct 183 CAELLLSRAVT 193
>gi|169627857|ref|YP_001701506.1| hypothetical protein MAB_0756c [Mycobacterium abscessus ATCC
19977]
gi|169239824|emb|CAM60852.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=210
Score = 206 bits (525), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/187 (57%), Positives = 131/187 (71%), Gaps = 1/187 (0%)
Query 6 NRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADR 65
R W+GV R RR L+AAGV+LLG PA+TVRAVCR AG+TERYFYE F+DR
Sbjct 7 QRRSWAGVSPAERADERRRELMAAGVRLLGLRPRPAVTVRAVCRSAGMTERYFYEHFSDR 66
Query 66 EHFVRAVYDDVCTRAMATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSG 125
+ FVRAVYD V RA+ L+ ++ E V+ F LMVD+P GRVLL+AP EP L+ SG
Sbjct 67 DTFVRAVYDHVGFRAIEALSGVRSAYEGVDAFARLMVDEPTMGRVLLIAPTFEPTLSESG 126
Query 126 AEWMPNFIELLQRKLS-RIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCV 184
+W+P F+ LLQ KLS + D V Q+LVATSL+GALT LFTAYLN L R++F+DYCV
Sbjct 127 YDWLPRFVALLQGKLSTNLADEVQQQLVATSLVGALTSLFTAYLNEELNVDRQRFVDYCV 186
Query 185 NMLLSTA 191
+LL A
Sbjct 187 QILLQGA 193
>gi|325675613|ref|ZP_08155297.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
gi|325553584|gb|EGD23262.1| TetR family transcriptional regulator [Rhodococcus equi ATCC
33707]
Length=206
Score = 198 bits (504), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 107/204 (53%), Positives = 137/204 (68%), Gaps = 10/204 (4%)
Query 6 NRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADR 65
R W+G LE R A RR+ L+AAG++LLG GG A++VRAVCR A LTERYFYESFADR
Sbjct 5 QRRTWAGTGLEERRAARRETLLAAGIELLGAEGGAAVSVRAVCRSAALTERYFYESFADR 64
Query 66 EHFVRAVYDDVCTRA----MATLTSAQTPRE----AVEQFVELMVDDPVRGRVLLLAPAV 117
+ FVRAVY+DV +A +A + S+ +P++ AV FVELMVDDP RGRVLLLAP
Sbjct 65 DEFVRAVYEDVGRQARDAIVAAVASSGSPQDRAVAAVSAFVELMVDDPARGRVLLLAPLA 124
Query 118 EPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRK 177
EPAL G E P F+ L+ +LS + DP +++ A L+GALT LF YL+G + A R+
Sbjct 125 EPALGGQGLELAPAFVLLVHEQLSPLSDPDERQMTAVGLVGALTSLFIGYLDGTITAPRE 184
Query 178 QFIDYCVNMLLSTAATYAPHRERG 201
QF+ +CV +L AA P RG
Sbjct 185 QFVAHCVALL--QAAGQPPGGSRG 206
>gi|111023231|ref|YP_706203.1| hypothetical protein RHA1_ro06268 [Rhodococcus jostii RHA1]
gi|110822761|gb|ABG98045.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=192
Score = 186 bits (471), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/182 (54%), Positives = 126/182 (70%), Gaps = 8/182 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
LE R RR++L+ AGV LLG GPA+ VRAVCR A LTERYFYESF DR+ FVR+VY
Sbjct 3 LEDRREARRNSLLRAGVALLGAPDGPAVNVRAVCRAAALTERYFYESFRDRDEFVRSVYT 62
Query 75 DVCTRAMATLT----SAQTPRE----AVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
V A ATL S +T R+ AV+ FV+LMVDDP GRVLLLAP EPAL+R G
Sbjct 63 AVGDEAQATLVEAVASTETARQRAEAAVDAFVKLMVDDPAMGRVLLLAPLSEPALSRRGI 122
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
+ MP F+ L+ +LS + D V ++LVA ++GALT LF YL+G + A+R+QF+ +CV +
Sbjct 123 DLMPGFVALVHDQLSAVDDEVEKQLVAVGVVGALTTLFIGYLDGTVAASREQFVAHCVTL 182
Query 187 LL 188
++
Sbjct 183 VV 184
>gi|312140747|ref|YP_004008083.1| tetr family transcriptional regulator [Rhodococcus equi 103S]
gi|311890086|emb|CBH49404.1| putative TetR family transcriptional regulator [Rhodococcus equi
103S]
Length=205
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/204 (52%), Positives = 136/204 (67%), Gaps = 10/204 (4%)
Query 6 NRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADR 65
R W+G LE R A RR+ L+ AG++LLG GG A++VRAVCR A LTERYFYESFADR
Sbjct 4 QRRTWAGTGLEERRAARREALLGAGIELLGAEGGAAVSVRAVCRSAALTERYFYESFADR 63
Query 66 EHFVRAVYDDVCTRA----MATLTSAQTPRE----AVEQFVELMVDDPVRGRVLLLAPAV 117
+ FVRAVY+DV +A +A + S+ +P++ AV FVELMVDDP RGRVLLLAP
Sbjct 64 DEFVRAVYEDVGRQARDALVAAVASSGSPQDRAVAAVSAFVELMVDDPARGRVLLLAPLA 123
Query 118 EPALTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRK 177
EPAL G E P F+ L+ +LS + DP +++ A L+GALT LF YL+G + A R+
Sbjct 124 EPALGGQGLELAPAFVLLVHEQLSPLSDPDARQMTAVGLVGALTSLFIGYLDGTITAPRE 183
Query 178 QFIDYCVNMLLSTAATYAPHRERG 201
QF+ +CV +L AA P RG
Sbjct 184 QFVAHCVALL--QAAGQPPGGSRG 205
>gi|226365738|ref|YP_002783521.1| TetR family transcriptional regulator [Rhodococcus opacus B4]
gi|226244228|dbj|BAH54576.1| putative TetR family transcriptional regulator [Rhodococcus opacus
B4]
Length=192
Score = 176 bits (446), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/182 (52%), Positives = 122/182 (68%), Gaps = 8/182 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
LE R RR++L+ AGV LLG GPA+ VRAVCR A LTERYFYESF DR+ FVR+VY
Sbjct 3 LEDRREARRNSLLRAGVALLGAPDGPAVNVRAVCRAASLTERYFYESFRDRDEFVRSVYA 62
Query 75 DVCTRAMATLTSA--------QTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
V +A L A + AV+ FV+LMVDDP GRVLLLAP EPAL+R G
Sbjct 63 AVGDQAQTALVEAVASTETARERAAAAVDAFVKLMVDDPAMGRVLLLAPLSEPALSRRGI 122
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
+ MP F+ L+ +LS + D V ++LVA ++GALT LF YL+G + A+R+QF+ +CV +
Sbjct 123 DLMPGFVGLVHDQLSAVDDEVEKQLVAIGVVGALTTLFIGYLDGTVAASREQFVAHCVTL 182
Query 187 LL 188
++
Sbjct 183 VV 184
>gi|229489674|ref|ZP_04383537.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229323771|gb|EEN89529.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=189
Score = 175 bits (443), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/183 (51%), Positives = 121/183 (67%), Gaps = 8/183 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+E R A R+ L GV LLG GPA+ VRAVC+ AGLTERYFYESF DR+ +V AV+
Sbjct 3 IEERRATRKATLFDVGVTLLGAVDGPAVNVRAVCKAAGLTERYFYESFTDRDQYVVAVHT 62
Query 75 DVCTRAMATLTSA---QTPREAV-----EQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
V RA + L SA +T EAV + FV+LMVDDP GRVLL+AP EP L+ G
Sbjct 63 FVAERAQSALASAVESETASEAVATAAVDAFVKLMVDDPAMGRVLLIAPLSEPVLSGRGI 122
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
E MP F++L+ +LS I DPV ++LVA L+GAL LF YL+G + R++F+ +CV +
Sbjct 123 ESMPAFVDLVYDQLSEIADPVDKQLVAVGLVGALFTLFIGYLDGTIVVDRERFVRHCVRL 182
Query 187 LLS 189
L++
Sbjct 183 LIN 185
>gi|300786892|ref|YP_003767183.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|299796406|gb|ADJ46781.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
U32]
gi|340528380|gb|AEK43585.1| TetR family transcriptional regulator [Amycolatopsis mediterranei
S699]
Length=196
Score = 174 bits (442), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/187 (51%), Positives = 123/187 (66%), Gaps = 9/187 (4%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W+G L+ R ALRR+ LVAAG++LLG G +VRAVCRHA LTERYFYESFADRE V
Sbjct 6 WAGTTLDDRKALRREQLVAAGLELLGTEGSAGTSVRAVCRHAKLTERYFYESFADREELV 65
Query 70 RAVYDDVCTRAMATLT----SAQTP----REAVEQFVELMVDDPVRGRVLLLAPAVEPAL 121
AVY+ V +A L A TP AV FVEL+VDDP +GRVLLLAP +PAL
Sbjct 66 AAVYEHVGEQARQALVDAVRDAPTPVSRAEHAVRAFVELIVDDPRKGRVLLLAPLTDPAL 125
Query 122 TRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFID 181
TR G +P F L+ +L+ D +++VA L+GALT +F AYL+G L +R++ +
Sbjct 126 TRRGLHLLPVFAALVGEQLTH-GDETERRMVAVGLVGALTNVFVAYLDGSLKVSRERLVA 184
Query 182 YCVNMLL 188
+CV ++L
Sbjct 185 HCVKLVL 191
>gi|226305584|ref|YP_002765544.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226184701|dbj|BAH32805.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=189
Score = 174 bits (441), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/183 (50%), Positives = 121/183 (67%), Gaps = 8/183 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+E R A R+ L GV LLG GPA+ VRAVC+ AGLTERYFYESF DR+ +V AV+
Sbjct 3 IEERRATRKATLFDVGVTLLGAVDGPAVNVRAVCKAAGLTERYFYESFTDRDQYVVAVHT 62
Query 75 DVCTRA---MATLTSAQTPREAV-----EQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
V RA +AT ++T EAV + FV+LMVDDP GRVLL+AP EP L+ G
Sbjct 63 FVAERAQSALATAVESETTSEAVATAAVDAFVKLMVDDPAMGRVLLIAPLSEPVLSGRGI 122
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
E MP F++L+ +LS I DPV ++LVA L+GAL LF YL+G + R++F+ +CV +
Sbjct 123 ESMPAFVDLVYDQLSEIADPVDKQLVAVGLVGALFTLFIGYLDGSIVVERERFVRHCVRL 182
Query 187 LLS 189
L++
Sbjct 183 LIN 185
>gi|296138341|ref|YP_003645584.1| TetR family transcriptional regulator [Tsukamurella paurometabola
DSM 20162]
gi|296026475|gb|ADG77245.1| putative transcriptional regulator, TetR family [Tsukamurella
paurometabola DSM 20162]
Length=194
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/181 (45%), Positives = 110/181 (61%), Gaps = 8/181 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
LE R RR ++ AGV LLGG G ++VRAVCR G+TERYFYE+F +R+ FVRAVYD
Sbjct 4 LEQRQHARRRTMLDAGVGLLGGPDGATVSVRAVCRSTGITERYFYEAFGNRDEFVRAVYD 63
Query 75 DVCTRAM--------ATLTSAQTPREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
DV RA T + P AV +VEL++D P GRVLLLAP E AL G
Sbjct 64 DVSHRAQDALRETVRGTASLPDLPAAAVAAYVELVIDQPELGRVLLLAPYRETALAEYGR 123
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
M F +++ L + +D ++L + ++GALT LFT +L+G L +R+ + YCV++
Sbjct 124 GHMAGFFDVVGAALPQNIDAQSRRLASVGMVGALTALFTEFLSGHLAVSREDLVSYCVDL 183
Query 187 L 187
L
Sbjct 184 L 184
>gi|302527629|ref|ZP_07279971.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302436524|gb|EFL08340.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length=191
Score = 149 bits (377), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/186 (49%), Positives = 121/186 (66%), Gaps = 9/186 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
++ R A RR L+AAG+ LLG G A++VRAVCR A LTERYFYESFADRE V AVY+
Sbjct 1 MDDRKAQRRAQLLAAGLDLLGAQGSAAVSVRAVCRSAKLTERYFYESFADRESLVAAVYE 60
Query 75 DVCTRAMATLTSAQT--------PREAVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGA 126
DV +A L A + AV FVELM+DDP +GRVLLLAP +PALT+ G
Sbjct 61 DVGDQARKALADAVSGEADPARRAERAVTAFVELMLDDPRKGRVLLLAPLTDPALTQRGL 120
Query 127 EWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNM 186
+P F L+ +LSR D ++LVA L+GAL+ +F AYL+G L +R++ +++CV +
Sbjct 121 HLLPAFTALVGEQLSR-GDETGRQLVAIGLVGALSNVFIAYLDGTLKVSRERLVEHCVQL 179
Query 187 LLSTAA 192
+L A
Sbjct 180 VLGADA 185
>gi|333920415|ref|YP_004493996.1| TetR family transcriptional regulator [Amycolicicoccus subflavus
DQS3-9A1]
gi|333482636|gb|AEF41196.1| TetR family transcriptional regulator [Amycolicicoccus subflavus
DQS3-9A1]
Length=193
Score = 146 bits (368), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/184 (42%), Positives = 113/184 (62%), Gaps = 9/184 (4%)
Query 15 LESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYD 74
+ R RR+ L+ AG++LLG GPA+T+RAVC AGLT+RYFYESFADR+ +V AV+D
Sbjct 6 MRQRQEARREALLDAGIELLGHPEGPAVTLRAVCSAAGLTQRYFYESFADRDAYVGAVFD 65
Query 75 DVCTRAMATLTSAQTPREA---------VEQFVELMVDDPVRGRVLLLAPAVEPALTRSG 125
V ++A+ + A T E +E F E++VD P GRVL+LAP +EPAL R+G
Sbjct 66 HVASQAIGVILKAYTYAEGDLNSRAHAVIEAFTEMIVDHPAAGRVLVLAPFIEPALGRAG 125
Query 126 AEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVN 185
+P F++L+ + ++ A + IGAL+ L+ +YL+G L +R + + CV
Sbjct 126 LARVPEFVDLVADGFDAYAEVDDRRTAAVAAIGALSSLYASYLDGTLTISRDKLVAGCVK 185
Query 186 MLLS 189
+L
Sbjct 186 SVLD 189
>gi|257056271|ref|YP_003134103.1| transcriptional regulator [Saccharomonospora viridis DSM 43017]
gi|256586143|gb|ACU97276.1| transcriptional regulator [Saccharomonospora viridis DSM 43017]
Length=202
Score = 145 bits (365), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/195 (45%), Positives = 118/195 (61%), Gaps = 9/195 (4%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W+G L R A RR L+ AG++LLG +G A++VRAVCR A LTERYFYE+F R+ FV
Sbjct 8 WAGTTLSDRRATRRRQLLEAGLELLGTSGPSAVSVRAVCRQAKLTERYFYENFTGRDEFV 67
Query 70 RAVYDDVCTRAMATLTSA---------QTPREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
AVY+ V A L A AV FV L++DDP +GRVLLL+P +PA
Sbjct 68 VAVYEHVAALAHQVLVDAVELAGPEIRDRAEAAVSVFVTLILDDPRKGRVLLLSPLADPA 127
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
L R GA+ +P F EL++ +LS VD + + AT+L+G L +F AYLNG L +R
Sbjct 128 LLRLGAQRLPMFAELVREQLSDRVDEQDRAMTATALVGGLANVFIAYLNGTLDVSRDHLT 187
Query 181 DYCVNMLLSTAATYA 195
+CV ++L A ++
Sbjct 188 AHCVRLVLGADALHS 202
>gi|284046847|ref|YP_003397187.1| TetR family transcriptional regulator [Conexibacter woesei DSM
14684]
gi|283951068|gb|ADB53812.1| transcriptional regulator, TetR family [Conexibacter woesei DSM
14684]
Length=211
Score = 139 bits (350), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/196 (44%), Positives = 113/196 (58%), Gaps = 14/196 (7%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W G LE R A RR L+ AG +LLG G ++TVR VCR A LTERYFYESFADR+ +
Sbjct 9 WGGRTLEDRRATRRAQLLDAGYELLGTRGASSVTVRGVCRAAQLTERYFYESFADRDALI 68
Query 70 RAVYDDVCTRAMATLTSAQT--PRE-------AVEQFVELMVDDPVRGRVLLLAPAVEPA 120
AV+ A L +A T P + AVE FV+L+ DDP RGRVLL + A
Sbjct 69 VAVHARAADEAREALAAAVTAVPADPLTRATAAVEAFVDLLQDDPRRGRVLLTEAFADEA 128
Query 121 LTRSGAEWMPNFIELLQRKLSRIV-----DPVLQKLVATSLIGALTGLFTAYLNGRLGAT 175
LTRSG + MP+F LL ++ D V +L + +L+GAL LF +L+G L T
Sbjct 129 LTRSGIDLMPSFAALLVEQIHAAFGDDGPDEVDAQLTSVALVGALAHLFVGWLDGTLPVT 188
Query 176 RKQFIDYCVNMLLSTA 191
R++ + + V ++L A
Sbjct 189 RERLVAHVVGLILGAA 204
>gi|169628564|ref|YP_001702213.1| hypothetical protein MAB_1473c [Mycobacterium abscessus ATCC
19977]
gi|169240531|emb|CAM61559.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=197
Score = 132 bits (333), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/193 (42%), Positives = 108/193 (56%), Gaps = 5/193 (2%)
Query 7 RGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADRE 66
R +W+G E R A RR L+ AG+ LG GPALT+R VCR +G++ER FYE F DR+
Sbjct 4 RRQWAGTTPEERRATRRRALLDAGIAALGAIDGPALTIRTVCRSSGVSERNFYEEFGDRD 63
Query 67 HFVRAVYDDVCTRAMATLTSAQTPRE-----AVEQFVELMVDDPVRGRVLLLAPAVEPAL 121
FVRAVY DV M +T + AVE F+ VD+PV GRVL++AP EP L
Sbjct 64 DFVRAVYQDVLESVMRVVTEFAAEGDDLETRAVETFIGATVDNPVYGRVLMVAPFTEPTL 123
Query 122 TRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFID 181
+G F L ++ L I DP ++ ++ SL+GA +G YL G L +R + ID
Sbjct 124 GSAGFAGSLAFASLAEKALIDIDDPGRRRFLSVSLVGAASGAIIDYLRGDLAISRDELID 183
Query 182 YCVNMLLSTAATY 194
Y M +A +
Sbjct 184 YISRMGRQVSAIF 196
>gi|333918262|ref|YP_004491843.1| TetR family transcriptional regulator [Amycolicicoccus subflavus
DQS3-9A1]
gi|333480483|gb|AEF39043.1| Transcriptional regulator, TetR family [Amycolicicoccus subflavus
DQS3-9A1]
Length=230
Score = 123 bits (309), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/208 (38%), Positives = 118/208 (57%), Gaps = 16/208 (7%)
Query 4 GQNRGRWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFA 63
G R W+G LE R A RR NLV + L+GG G A+TVR+VCR AGLT+RYFYE+F
Sbjct 10 GPERRVWAGTTLEERRAERRRNLVDTALSLIGGEGCTAVTVRSVCRKAGLTDRYFYENFD 69
Query 64 DREHFVRAVYDDVCTRAMATL--TSAQTPREAVEQ--------FVELMVDDPVRGRVLLL 113
R+ V +++V A+A L + ++ P +++E F+ +DDP +GR+LL+
Sbjct 70 GRDDLVVTTFNEVVGEALALLRDSISRLPDDSLETRARTIVNAFLSFAIDDPRKGRLLLV 129
Query 114 APAVEPALTRSGAEWMPNFIELLQRKLSRIVD---PVLQKLVATSLIGALTGLFTAYLNG 170
P E ALT G + P +L++ + D + + A L G+L LF+A+L G
Sbjct 130 EPLAEKALTGVGVTFGPIITKLMRAQFPAGPDRPSRTSRAMTALGLTGSLGALFSAWLGG 189
Query 171 RLGATRKQFIDYCVNMLLSTAATYAPHR 198
L TR + D+CV ++L+ +YAP R
Sbjct 190 TLHVTRDELTDHCVILILN---SYAPRR 214
>gi|239986014|ref|ZP_04706678.1| TetR family transcriptional regulator [Streptomyces roseosporus
NRRL 11379]
gi|291442955|ref|ZP_06582345.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
gi|291345902|gb|EFE72806.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
15998]
Length=202
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/189 (38%), Positives = 102/189 (54%), Gaps = 9/189 (4%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W G L R A RR L+ +L G G A+TVR+VCR A LT+RYFYESF R+ +
Sbjct 6 WGGTKLADRRAARRQTLLDVAERLAGEEGCAAVTVRSVCREARLTDRYFYESFTGRDDLL 65
Query 70 RAVYDDVCTRAMATLTSAQT---------PREAVEQFVELMVDDPVRGRVLLLAPAVEPA 120
A ++ V A + L A R AV FV L++D P +GR+LLL P +P
Sbjct 66 LAAFERVADEARSALEGAVATGGPQREVRARAAVSAFVALVLDAPHKGRLLLLEPFADPE 125
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
L MP F +L+ +L+ D + ++L A +L+G L LF +L+G L R++
Sbjct 126 LGARSHLLMPAFTDLVGGQLAGTGDDIDRRLAAHALVGGLANLFAGWLHGTLDVPRERLE 185
Query 181 DYCVNMLLS 189
+CV ++L+
Sbjct 186 AHCVELVLT 194
>gi|54024532|ref|YP_118774.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
gi|54016040|dbj|BAD57410.1| putative transcriptional regulator [Nocardia farcinica IFM 10152]
Length=208
Score = 119 bits (298), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/199 (39%), Positives = 109/199 (55%), Gaps = 12/199 (6%)
Query 1 VQTGQNRGR-----WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTE 55
+QTGQ+ W G L R RR L+ A + L+G AG +T+RAVCR A LT+
Sbjct 1 MQTGQDSDDAGPRIWGGTTLTERREARRAALLEAALDLIGEAGAAGVTMRAVCRRANLTD 60
Query 56 RYFYESFADREHFVRAVYDDVCTR---AMATLTSAQTP---REAVEQFVELMVDDPVRGR 109
RYFYESF+ R+ + +Y +V M T A P R E V+ +++DP + R
Sbjct 61 RYFYESFSSRDELLDVLYREVAEEFLDPMTAFTDADDPSRDRALAEVLVDKVLEDPRKSR 120
Query 110 VLLLAPAVEPALTRSGAEWMPNFIELLQRKL-SRIVDPVLQKLVATSLIGALTGLFTAYL 168
+ L+ P L ++ MP F L+Q L I DPV ++L A S+ G+F+A+L
Sbjct 121 LFLVEPYSSTGLGQTTIAVMPAFTRLIQDHLFVHIEDPVKRRLAAVSMASGNAGMFSAWL 180
Query 169 NGRLGATRKQFIDYCVNML 187
NG L ATR+Q +++CV ML
Sbjct 181 NGSLRATREQIVEHCVAML 199
>gi|326780863|ref|ZP_08240128.1| regulatory protein TetR [Streptomyces cf. griseus XylebKG-1]
gi|326661196|gb|EGE46042.1| regulatory protein TetR [Streptomyces griseus XylebKG-1]
Length=199
Score = 119 bits (297), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/189 (38%), Positives = 103/189 (55%), Gaps = 9/189 (4%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W G L R A RR L+ +L G G A+TVR+VCR A LT+RYFYESF R+ +
Sbjct 6 WGGTKLADRRAARRQVLLDVAERLAGEEGCAAVTVRSVCREARLTDRYFYESFTGRDDLL 65
Query 70 RAVYDDVCTRAMATLTSA---QTPRE------AVEQFVELMVDDPVRGRVLLLAPAVEPA 120
A ++ V A L A P+ V FV L++D P +GR+LLL P +PA
Sbjct 66 LAAFERVADEARGALEEAVALSDPQRDIRAGAVVSAFVALVLDAPHKGRLLLLEPFADPA 125
Query 121 LTRSGAEWMPNFIELLQRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFI 180
L MP F +L+ +L+ D + +++ A +L+GAL LF +L+G L R++
Sbjct 126 LGAHSHRLMPVFTDLVGGQLAGTGDDIDRRMAAHALVGALANLFAGWLHGTLDVPRERLE 185
Query 181 DYCVNMLLS 189
+CV ++L+
Sbjct 186 AHCVELVLA 194
>gi|343926256|ref|ZP_08765765.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
gi|343763885|dbj|GAA12691.1| putative TetR family transcriptional regulator [Gordonia alkanivorans
NBRC 16433]
Length=204
Score = 111 bits (277), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/192 (36%), Positives = 101/192 (53%), Gaps = 15/192 (7%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
W G LE R RR+ ++A LLG G A+T+RAV R AGL+ RYFYESF+ E V
Sbjct 7 WRGQTLEDRSTDRREQMLAVAETLLGTGGTAAVTMRAVVREAGLSPRYFYESFSSTEELV 66
Query 70 RAVYDDVCTRAMATLTSAQTP-------REAVEQFVELMVDDPVRGRVLLLAPAVEPALT 122
AVYD V + +A + + P R +E F E D+P R R+LL P + L
Sbjct 67 TAVYDRVTEQLLARIAVIERPADRRGNVRALLEGFREFFQDEPGRARILLREPLADDVLR 126
Query 123 RSGAEWMPNFIELLQRKLSRIVD-----PVLQKLVATSLIGALTGLFTAYLNGRLGATRK 177
A +P F+ Q L+ + D P +++++L GAL L+ +++GRL T +
Sbjct 127 AHRAATVPGFV---QAVLAMVTDENSLAPERVAVISSALTGALVALYLDHIDGRLALTPE 183
Query 178 QFIDYCVNMLLS 189
Q D V+++ +
Sbjct 184 QLSDAAVDLVFA 195
>gi|229488501|ref|ZP_04382367.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229324005|gb|EEN89760.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=218
Score = 108 bits (271), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/199 (35%), Positives = 101/199 (51%), Gaps = 16/199 (8%)
Query 9 RWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHF 68
RW G E R A RR L+ AG+Q++G G A T+RA CR A LTERYFYESFA+R+
Sbjct 13 RWRGQEPEDRRAARRTQLIEAGLQIMGTEGAAAATMRATCREAALTERYFYESFANRDEL 72
Query 69 VRAVYDDVCTRAMATLTSA-----QTP----REAVEQFVELMVDDPVRGRVLLLAPAVEP 119
+ AV D+V A T+ A P R V+ F + DP RGR++ + EP
Sbjct 73 LVAVLDEVVLGARDTILDALEAAPSEPSALIRHVVKAFTNYVFKDPRRGRIMFVESQAEP 132
Query 120 ALTRSGAEWMPNFIELLQRKLSRI-----VDPVLQKLVATSLIGALTGLFTAYLNGRLGA 174
AL G E M F + L + D +L + L GAL ++ A+
Sbjct 133 ALWDRGRELMAEFTNPISASLELMYGGEATDSANSELNSVGLFGALAFIYQAHTPSS-KI 191
Query 175 TRKQFIDYCVNMLLSTAAT 193
+RK+ +++ +++++ AT
Sbjct 192 SRKRLVEH-ISLMVEAQAT 209
>gi|226308148|ref|YP_002768108.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226187265|dbj|BAH35369.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=218
Score = 108 bits (269), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/199 (35%), Positives = 101/199 (51%), Gaps = 16/199 (8%)
Query 9 RWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHF 68
RW G E R A RR L+ AG+Q++G G A T+RA CR A LTERYFYESFA+R+
Sbjct 13 RWRGQEPEDRRAARRAQLIEAGLQIMGTEGAAAATMRATCREAALTERYFYESFANRDEL 72
Query 69 VRAVYDDVCTRAMATLTSA-----QTP----REAVEQFVELMVDDPVRGRVLLLAPAVEP 119
+ AV D+V A T+ A P R V+ F + DP RGR++ + EP
Sbjct 73 LVAVLDEVVLGARDTILDALEAAPSEPSALIRHVVKAFTTYVFKDPRRGRIMFVESQAEP 132
Query 120 ALTRSGAEWMPNFIELLQRKLSRI-----VDPVLQKLVATSLIGALTGLFTAYLNGRLGA 174
AL G E M F + L + D +L + L GAL ++ A+
Sbjct 133 ALWDRGRELMAEFTNPISASLELMYGGEATDSANSELNSVGLFGALAFIYQAHTPSS-KI 191
Query 175 TRKQFIDYCVNMLLSTAAT 193
+RK+ +++ +++++ AT
Sbjct 192 SRKRLVEH-ISLMVEAQAT 209
>gi|229491713|ref|ZP_04385534.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229321394|gb|EEN87194.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=223
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/193 (36%), Positives = 99/193 (52%), Gaps = 12/193 (6%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
+ GV R A RR+ L+ AG++L+G A P LTVR VC+ AG+ RYFYESF DR+ +
Sbjct 28 YGGVDGALRVAQRREALIEAGLELMGSAE-PELTVRGVCKQAGVAARYFYESFTDRDALM 86
Query 70 RAVYD----DVCTRAMATLTSAQTPR----EAVEQFVELMVDDPVRGRVLLLAPAVEPAL 121
AVYD D+ A + +A+T R + V + +DP RGR+L + P L
Sbjct 87 SAVYDTVITDIAVSTQAAVDAAETERGKALAGIANIVRTIANDPRRGRLLFSSALTSPVL 146
Query 122 TRSGAEWMPNFIELL---QRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQ 178
FI LL + R+ D L AT L+G L +A+L+G + T ++
Sbjct 147 AEKRQASTTIFIGLLAANAKTFYRLNDSGHLTLTATFLVGGLAQTLSAWLDGYIDVTEEE 206
Query 179 FIDYCVNMLLSTA 191
+ C +LL+ A
Sbjct 207 LVAECAAILLAPA 219
>gi|182440199|ref|YP_001827918.1| TetR family transcriptional regulator [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178468715|dbj|BAG23235.1| putative TetR-family transcriptional regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
Length=175
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/167 (38%), Positives = 94/167 (57%), Gaps = 9/167 (5%)
Query 32 QLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFVRAVYDDVCTRAMATLTSA---Q 88
+L G G A+TVR+VCR A LT+RYFYESF R+ + A ++ V A L A
Sbjct 4 RLAGEEGCAAVTVRSVCREARLTDRYFYESFTGRDDLLLAAFERVADEARGALEEAVALS 63
Query 89 TPRE------AVEQFVELMVDDPVRGRVLLLAPAVEPALTRSGAEWMPNFIELLQRKLSR 142
P+ V FV L++D P +GR+LLL P +PAL MP F +L+ +L+
Sbjct 64 DPQRDIRAGAVVSAFVALVLDAPHKGRLLLLEPFADPALGAHSHRLMPVFTDLVGGQLAG 123
Query 143 IVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQFIDYCVNMLLS 189
D + +++ A +L+GAL LF +L+G L R++ +CV ++L+
Sbjct 124 TGDDIDRRMAAHALVGALANLFAGWLHGTLDVPRERLEAHCVELVLA 170
>gi|226308996|ref|YP_002768956.1| TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226188113|dbj|BAH36217.1| putative TetR family transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=206
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/193 (36%), Positives = 98/193 (51%), Gaps = 12/193 (6%)
Query 10 WSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHFV 69
+ GV R A RR+ L+ AG++L+G A P LTVR VC+ AG+ RYFYESF DR+ +
Sbjct 11 YGGVDGALRVAQRRETLIEAGLELMGSAE-PELTVRGVCKKAGVAARYFYESFTDRDALM 69
Query 70 RAVYD----DVCTRAMATLTSAQTPR----EAVEQFVELMVDDPVRGRVLLLAPAVEPAL 121
AVYD D+ A + +A+T R + V + DP RGR+L + P L
Sbjct 70 SAVYDTVITDIAVSTQAAVDAAETERGKALAGIANIVRTIAQDPRRGRLLFSSALTSPVL 129
Query 122 TRSGAEWMPNFIELL---QRKLSRIVDPVLQKLVATSLIGALTGLFTAYLNGRLGATRKQ 178
FI LL + R+ D L AT L+G L +A+L+G + T ++
Sbjct 130 AEKRRASTTIFIGLLAANAKTFYRLNDSGHLTLTATFLVGGLAQTLSAWLDGYIDVTEEE 189
Query 179 FIDYCVNMLLSTA 191
+ C +LL+ A
Sbjct 190 LVAECAAILLAPA 202
>gi|229492962|ref|ZP_04386757.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
gi|229319992|gb|EEN85818.1| transcriptional regulator, TetR family [Rhodococcus erythropolis
SK121]
Length=206
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/199 (35%), Positives = 105/199 (53%), Gaps = 18/199 (9%)
Query 9 RWSGVPLESRHALRRDNLVAAGVQLLGGAGGPALTVRAVCRHAGLTERYFYESFADREHF 68
R++G+ E R ALRR++L+AAG+ + AG T+ A+C HA LTERYFYESF R+
Sbjct 8 RYAGLSGEQRAALRRESLLAAGLDVFAAAGRQGATMTAICAHAKLTERYFYESFTSRDEL 67
Query 69 VRAVYDDVCTR----AMATLTSAQTPRE-----AVEQFVELMVDDPVRGRVLLL-APAVE 118
++ V+D + MA L + RE A+ FV ++ DDP +GRV ++ + A E
Sbjct 68 LQQVFDGIVDEVRVAGMAALRTTDGTREERVRSAIASFVNILTDDPRKGRVAMVESVAYE 127
Query 119 PALT-RSGAEWMPNFIELLQRKLS-----RIVDPVLQKLVATSLIGALTGLFTAYLNGRL 172
P T R GA + F +++ + + R P ++ +G L L TA+LNG +
Sbjct 128 PLRTHRRGA--LRGFAQMVADEAALLYGDRAWPPHQGEINGLLFVGGLAELVTAWLNGEI 185
Query 173 GATRKQFIDYCVNMLLSTA 191
T + +D STA
Sbjct 186 DITPTEIVDAATYQFTSTA 204
Lambda K H
0.322 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 251148961304
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40