BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0827c Length=130 Score E Sequences producing significant alignments: (Bits) Value gi|15607967|ref|NP_215342.1| transcriptional regulatory protein ... 267 3e-70 gi|15840240|ref|NP_335277.1| ArsR family transcriptional regulat... 267 4e-70 gi|340625842|ref|YP_004744294.1| putative transcriptional regula... 266 6e-70 gi|289760956|ref|ZP_06520334.1| ArsR family transcriptional regu... 254 3e-66 gi|323720751|gb|EGB29823.1| transcriptional regulator [Mycobacte... 228 2e-58 gi|339297483|gb|AEJ49593.1| transcriptional regulatory protein [... 218 2e-55 gi|118616294|ref|YP_904626.1| transcription regulator ArsR [Myco... 218 3e-55 gi|41406759|ref|NP_959595.1| hypothetical protein MAP0661c [Myco... 218 3e-55 gi|342860308|ref|ZP_08716959.1| hypothetical protein MCOL_15576 ... 209 1e-52 gi|240171879|ref|ZP_04750538.1| transcription regulator ArsR [My... 204 3e-51 gi|296166410|ref|ZP_06848842.1| ArsR family transcriptional regu... 201 2e-50 gi|226306921|ref|YP_002766881.1| ArsR family transcriptional reg... 201 4e-50 gi|229491070|ref|ZP_04384901.1| regulatory protein, ArsR [Rhodoc... 200 5e-50 gi|254820532|ref|ZP_05225533.1| hypothetical protein MintA_11416... 189 1e-46 gi|120404687|ref|YP_954516.1| regulatory protein ArsR [Mycobacte... 188 2e-46 gi|336458348|gb|EGO37327.1| putative transcriptional regulator [... 186 9e-46 gi|118463740|ref|YP_880049.1| ArsR family transcriptional regula... 186 1e-45 gi|254773713|ref|ZP_05215229.1| hypothetical protein MaviaA2_034... 186 1e-45 gi|145222491|ref|YP_001133169.1| regulatory protein ArsR [Mycoba... 182 1e-44 gi|120404202|ref|YP_954031.1| regulatory protein ArsR [Mycobacte... 182 1e-44 gi|111022337|ref|YP_705309.1| ArsR family transcriptional regula... 182 2e-44 gi|169629688|ref|YP_001703337.1| ArsR family transcriptional reg... 182 2e-44 gi|226364874|ref|YP_002782656.1| ArsR family transcriptional reg... 179 1e-43 gi|317507186|ref|ZP_07964941.1| arsR family bacterial regulatory... 176 1e-42 gi|126434086|ref|YP_001069777.1| ArsR family transcriptional reg... 174 4e-42 gi|333922041|ref|YP_004495622.1| putative ArsR family transcript... 171 3e-41 gi|108798458|ref|YP_638655.1| ArsR family transcriptional regula... 171 3e-41 gi|343928430|ref|ZP_08767878.1| putative ArsR family transcripti... 169 9e-41 gi|262203029|ref|YP_003274237.1| ArsR family transcriptional reg... 166 1e-39 gi|84496074|ref|ZP_00994928.1| probable transcriptional regulato... 160 6e-38 gi|119952329|ref|YP_950002.1| ArsR family transcriptional regula... 137 5e-31 gi|289744551|ref|ZP_06503929.1| LOW QUALITY PROTEIN: hypothetica... 131 4e-29 gi|326331211|ref|ZP_08197505.1| transcriptional regulator, ArsR ... 128 2e-28 gi|269796936|ref|YP_003316391.1| ArsR family transcriptional reg... 124 3e-27 gi|88856552|ref|ZP_01131209.1| predicted transcriptional regulat... 123 9e-27 gi|116662430|ref|YP_829483.1| ArsR family transcriptional regula... 118 2e-25 gi|336321901|ref|YP_004601869.1| regulatory protein ArsR [Cellvi... 117 4e-25 gi|336119958|ref|YP_004574736.1| ArsR family transcriptional reg... 115 2e-24 gi|309811540|ref|ZP_07705321.1| transcriptional regulator, ArsR ... 112 1e-23 gi|334337721|ref|YP_004542873.1| transcriptional regulator, ArsR... 110 5e-23 gi|62391617|ref|YP_227019.1| ArsR family regulatory protein [Cor... 110 1e-22 gi|336120886|ref|YP_004575672.1| ArsR family transcriptional reg... 109 1e-22 gi|23308976|ref|NP_601975.2| transcriptional regulator [Coryneba... 109 1e-22 gi|332668890|ref|YP_004451898.1| regulatory protein ArsR [Cellul... 107 6e-22 gi|46205509|ref|ZP_00048463.2| COG0640: Predicted transcriptiona... 107 8e-22 gi|334697489|gb|AEG82286.1| ArsR-family transcription regulator ... 104 4e-21 gi|297625703|ref|YP_003687466.1| ArsR family transcriptional reg... 104 5e-21 gi|337291464|ref|YP_004630485.1| ArsR family transcription regul... 104 5e-21 gi|336179960|ref|YP_004585335.1| ArsR family transcriptional reg... 102 2e-20 gi|300859095|ref|YP_003784078.1| ArsR family transcriptional reg... 100 6e-20 >gi|15607967|ref|NP_215342.1| transcriptional regulatory protein [Mycobacterium tuberculosis H37Rv] gi|31792015|ref|NP_854508.1| transcriptional regulatory protein [Mycobacterium bovis AF2122/97] gi|121636751|ref|YP_976974.1| putative transcriptional regulatory protein [Mycobacterium bovis BCG str. Pasteur 1173P2] 68 more sequence titles Length=130 Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ Sbjct 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV Sbjct 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 Query 121 AKASATKDVG 130 AKASATKDVG Sbjct 121 AKASATKDVG 130 >gi|15840240|ref|NP_335277.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis CDC1551] gi|254231139|ref|ZP_04924466.1| hypothetical protein TBCG_00817 [Mycobacterium tuberculosis C] gi|13880398|gb|AAK45091.1| transcriptional regulator, ArsR family [Mycobacterium tuberculosis CDC1551] gi|124600198|gb|EAY59208.1| hypothetical protein TBCG_00817 [Mycobacterium tuberculosis C] Length=132 Score = 267 bits (683), Expect = 4e-70, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ Sbjct 3 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 62 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV Sbjct 63 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 122 Query 121 AKASATKDVG 130 AKASATKDVG Sbjct 123 AKASATKDVG 132 >gi|340625842|ref|YP_004744294.1| putative transcriptional regulatory protein [Mycobacterium canettii CIPT 140010059] gi|340004032|emb|CCC43168.1| putative transcriptional regulatory protein [Mycobacterium canettii CIPT 140010059] Length=130 Score = 266 bits (681), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 129/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLW+LADREMSVNELAEQVGKPAPSVSQ Sbjct 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWTLADREMSVNELAEQVGKPAPSVSQ 60 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV Sbjct 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 Query 121 AKASATKDVG 130 AKASATKDVG Sbjct 121 AKASATKDVG 130 >gi|289760956|ref|ZP_06520334.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis GM 1503] gi|289708462|gb|EFD72478.1| ArsR family transcriptional regulator [Mycobacterium tuberculosis GM 1503] Length=140 Score = 254 bits (649), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ Sbjct 3 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 62 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV Sbjct 63 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 122 Query 121 AKAS 124 AKAS Sbjct 123 AKAS 126 >gi|323720751|gb|EGB29823.1| transcriptional regulator [Mycobacterium tuberculosis CDC1551A] Length=113 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/113 (99%), Positives = 113/113 (100%), Gaps = 0/113 (0%) Query 18 VVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDG 77 +VEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDG Sbjct 1 MVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDG 60 Query 78 TTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 130 TTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG Sbjct 61 TTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 113 >gi|339297483|gb|AEJ49593.1| transcriptional regulatory protein [Mycobacterium tuberculosis CCDC5180] Length=107 Score = 218 bits (555), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%) Query 24 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR 83 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR Sbjct 1 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR 60 Query 84 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 130 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG Sbjct 61 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 107 >gi|118616294|ref|YP_904626.1| transcription regulator ArsR [Mycobacterium ulcerans Agy99] gi|183984820|ref|YP_001853111.1| transcription regulator ArsR [Mycobacterium marinum M] gi|118568404|gb|ABL03155.1| ArsR-family transcriptional regulator [Mycobacterium ulcerans Agy99] gi|183178146|gb|ACC43256.1| ArsR-family transcriptional regulator [Mycobacterium marinum M] Length=123 Score = 218 bits (555), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 106/123 (87%), Positives = 112/123 (92%), Gaps = 0/123 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 M+AD+ PLPDDQV LVVEVFRMLADATRVQVLWSLADREMSVNELAE + KPAPSVSQ Sbjct 1 MHADNRSQPLPDDQVGLVVEVFRMLADATRVQVLWSLADREMSVNELAEHIHKPAPSVSQ 60 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRD TTIFY LENEHVRQLVIDAVFNAEHAGPG+PRHHR+ GGLQ+V Sbjct 61 HLAKLRMARLVRTRRDKTTIFYSLENEHVRQLVIDAVFNAEHAGPGVPRHHRSDGGLQAV 120 Query 121 AKA 123 A Sbjct 121 TDA 123 >gi|41406759|ref|NP_959595.1| hypothetical protein MAP0661c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395109|gb|AAS02978.1| hypothetical protein MAP_0661c [Mycobacterium avium subsp. paratuberculosis K-10] Length=135 Score = 218 bits (554), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 108/130 (84%), Positives = 114/130 (88%), Gaps = 0/130 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 M+ADS LPDDQV LVVEVFRMLADATRVQVLWSL DREMSVNELAE VGKPAPSVSQ Sbjct 3 MHADSSAGRLPDDQVRLVVEVFRMLADATRVQVLWSLTDREMSVNELAEHVGKPAPSVSQ 62 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRR+GTTIFY LENEHVRQLVIDAVFNAEHAGPG+P HHR GGL+SV Sbjct 63 HLAKLRMARLVRTRREGTTIFYSLENEHVRQLVIDAVFNAEHAGPGVPGHHRGEGGLKSV 122 Query 121 AKASATKDVG 130 A +S + G Sbjct 123 AASSRHRPRG 132 >gi|342860308|ref|ZP_08716959.1| hypothetical protein MCOL_15576 [Mycobacterium colombiense CECT 3035] gi|342131963|gb|EGT85204.1| hypothetical protein MCOL_15576 [Mycobacterium colombiense CECT 3035] Length=133 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 102/124 (83%), Positives = 110/124 (89%), Gaps = 0/124 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 M+AD+G LPDDQ LVVEVFRMLADATRVQVLWSL D EMSVNELAE VGKPAPSVSQ Sbjct 1 MHADNGKGRLPDDQANLVVEVFRMLADATRVQVLWSLTDHEMSVNELAEHVGKPAPSVSQ 60 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRR+GTTIFY LEN+HVRQLVIDAVFNAEHAGPG+P HHR GL++V Sbjct 61 HLAKLRMARLVRTRREGTTIFYSLENDHVRQLVIDAVFNAEHAGPGVPGHHRGDSGLKAV 120 Query 121 AKAS 124 A+ S Sbjct 121 AEPS 124 >gi|240171879|ref|ZP_04750538.1| transcription regulator ArsR [Mycobacterium kansasii ATCC 12478] Length=126 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 105/130 (81%), Positives = 112/130 (87%), Gaps = 4/130 (3%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 M+A++ P LPDDQ LVVEVFRMLADATRVQ+LWSLA EMSVNELAE V KPAPSVSQ Sbjct 1 MHANNRPTRLPDDQAGLVVEVFRMLADATRVQILWSLATTEMSVNELAEHVRKPAPSVSQ 60 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 HLAKLRMARLVRTRRDGTTIFY LEN+HVRQLVIDAVFNAEHAGPG+PRHHR GLQ+V Sbjct 61 HLAKLRMARLVRTRRDGTTIFYSLENDHVRQLVIDAVFNAEHAGPGVPRHHR-GDGLQAV 119 Query 121 AKASATKDVG 130 SAT D G Sbjct 120 ---SATPDAG 126 >gi|296166410|ref|ZP_06848842.1| ArsR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295898171|gb|EFG77745.1| ArsR family transcriptional regulator [Mycobacterium parascrofulaceum ATCC BAA-614] Length=119 Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 96/112 (86%), Positives = 103/112 (92%), Gaps = 0/112 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 +PDDQ LVVEVFRMLADATRVQVLWSL DRE+SVNELAE VGKPAPSVSQHLAKLRMAR Sbjct 1 MPDDQANLVVEVFRMLADATRVQVLWSLTDRELSVNELAEHVGKPAPSVSQHLAKLRMAR 60 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVA 121 LVRTRR+GTTIFY LEN+HVRQLV DAVFNAEHAGPG+P HHR AGGL++V Sbjct 61 LVRTRREGTTIFYSLENDHVRQLVTDAVFNAEHAGPGVPGHHRKAGGLKAVG 112 >gi|226306921|ref|YP_002766881.1| ArsR family transcriptional regulator [Rhodococcus erythropolis PR4] gi|226186038|dbj|BAH34142.1| putative ArsR family transcriptional regulator [Rhodococcus erythropolis PR4] Length=140 Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 101/129 (79%), Positives = 110/129 (86%), Gaps = 2/129 (1%) Query 1 MYADSG--PDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSV 58 M ADSG LPDDQV LVVEVFRMLADATRVQVLW+L DRE SVNELAE+VGKPAPSV Sbjct 1 MNADSGVCRRKLPDDQVDLVVEVFRMLADATRVQVLWALVDRECSVNELAERVGKPAPSV 60 Query 59 SQHLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQ 118 SQHLAKLRMARLVRTRRDGTT+FYRLEN+HVRQLV DAVFNAEHAGPG+P HHR+ G L+ Sbjct 61 SQHLAKLRMARLVRTRRDGTTVFYRLENDHVRQLVTDAVFNAEHAGPGLPGHHRSEGELR 120 Query 119 SVAKASATK 127 + + K Sbjct 121 EIHPERSAK 129 >gi|229491070|ref|ZP_04384901.1| regulatory protein, ArsR [Rhodococcus erythropolis SK121] gi|229322051|gb|EEN87841.1| regulatory protein, ArsR [Rhodococcus erythropolis SK121] Length=140 Score = 200 bits (509), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 100/122 (82%), Positives = 108/122 (89%), Gaps = 2/122 (1%) Query 1 MYADSG--PDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSV 58 M ADSG LPDDQV LVVEVFRMLADATRVQVLW+L DRE SVNELAE+VGKPAPSV Sbjct 1 MNADSGVCRRKLPDDQVDLVVEVFRMLADATRVQVLWALVDRECSVNELAERVGKPAPSV 60 Query 59 SQHLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQ 118 SQHLAKLRMARLVRTRRDGTT+FYRLEN+HVRQLV DAVFNAEHAGPG+P HHR+ G L+ Sbjct 61 SQHLAKLRMARLVRTRRDGTTVFYRLENDHVRQLVTDAVFNAEHAGPGLPGHHRSEGELR 120 Query 119 SV 120 + Sbjct 121 EI 122 >gi|254820532|ref|ZP_05225533.1| hypothetical protein MintA_11416 [Mycobacterium intracellulare ATCC 13950] Length=115 Score = 189 bits (479), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 91/107 (86%), Positives = 99/107 (93%), Gaps = 0/107 (0%) Query 18 VVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDG 77 +VEVFRMLADATRVQVLWSL D EMSVNELAE VGKPAPSVSQHLAKLRMARLVRTRR+G Sbjct 1 MVEVFRMLADATRVQVLWSLTDHEMSVNELAEHVGKPAPSVSQHLAKLRMARLVRTRREG 60 Query 78 TTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKAS 124 TTIFY LEN+HVRQLVIDAVFNAEHAGPG+P HHR GL++VA++S Sbjct 61 TTIFYSLENDHVRQLVIDAVFNAEHAGPGVPGHHRGDDGLKAVAESS 107 >gi|120404687|ref|YP_954516.1| regulatory protein ArsR [Mycobacterium vanbaalenii PYR-1] gi|119957505|gb|ABM14510.1| transcriptional regulator, ArsR family [Mycobacterium vanbaalenii PYR-1] Length=137 Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 91/117 (78%), Positives = 103/117 (89%), Gaps = 0/117 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LP+DQV LVVEVFRMLADATRVQVLW+L DREMSVNELAE VGKPAPSVSQHLAKLRMAR Sbjct 12 LPEDQVGLVVEVFRMLADATRVQVLWALVDREMSVNELAEHVGKPAPSVSQHLAKLRMAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASAT 126 LVRTRR+GTTIFY +EN+HV QLV DAVFNAEH+GPG+P HH + G L+++ + T Sbjct 72 LVRTRREGTTIFYSMENDHVAQLVTDAVFNAEHSGPGVPGHHASTGELRALHPDTPT 128 >gi|336458348|gb|EGO37327.1| putative transcriptional regulator [Mycobacterium avium subsp. paratuberculosis S397] Length=110 Score = 186 bits (472), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 91/107 (86%), Positives = 96/107 (90%), Gaps = 0/107 (0%) Query 24 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR 83 MLADATRVQVLWSL DREMSVNELAE VGKPAPSVSQHLAKLRMARLVRTRR+GTTIFY Sbjct 1 MLADATRVQVLWSLTDREMSVNELAEHVGKPAPSVSQHLAKLRMARLVRTRREGTTIFYS 60 Query 84 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 130 LENEHVRQLVIDAVFNAEHAGPG+P HHR GGL+SVA +S + G Sbjct 61 LENEHVRQLVIDAVFNAEHAGPGVPGHHRGEGGLKSVAASSRHRPRG 107 >gi|118463740|ref|YP_880049.1| ArsR family transcriptional regulator [Mycobacterium avium 104] gi|118165027|gb|ABK65924.1| transcriptional regulator, ArsR family protein [Mycobacterium avium 104] Length=110 Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 91/107 (86%), Positives = 96/107 (90%), Gaps = 0/107 (0%) Query 24 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR 83 MLADATRVQVLWSL DREMSVNELAE VGKPAPSVSQHLAKLRMARLVRTRR+GTTIFY Sbjct 1 MLADATRVQVLWSLTDREMSVNELAEHVGKPAPSVSQHLAKLRMARLVRTRREGTTIFYS 60 Query 84 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASATKDVG 130 LENEHVRQLVIDAVFNAEHAGPG+P HHR GGL+SVA +S + G Sbjct 61 LENEHVRQLVIDAVFNAEHAGPGVPGHHRGEGGLKSVAASSRHRPRG 107 >gi|254773713|ref|ZP_05215229.1| hypothetical protein MaviaA2_03422 [Mycobacterium avium subsp. avium ATCC 25291] Length=110 Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 90/101 (90%), Positives = 94/101 (94%), Gaps = 0/101 (0%) Query 24 MLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRDGTTIFYR 83 MLADATRVQVLWSL DREMSVNELAE VGKPAPSVSQHLAKLRMARLVRTRR+GTTIFY Sbjct 1 MLADATRVQVLWSLTDREMSVNELAEYVGKPAPSVSQHLAKLRMARLVRTRREGTTIFYS 60 Query 84 LENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKAS 124 LENEHVRQLVIDAVFNAEHAGPG+P HHR GGL+SVA +S Sbjct 61 LENEHVRQLVIDAVFNAEHAGPGVPGHHRGEGGLKSVAASS 101 >gi|145222491|ref|YP_001133169.1| regulatory protein ArsR [Mycobacterium gilvum PYR-GCK] gi|315442938|ref|YP_004075817.1| ArsR family transcriptional regulator [Mycobacterium sp. Spyr1] gi|145214977|gb|ABP44381.1| transcriptional regulator, ArsR family [Mycobacterium gilvum PYR-GCK] gi|315261241|gb|ADT97982.1| transcriptional regulator, ArsR family [Mycobacterium sp. Spyr1] Length=141 Score = 182 bits (463), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 88/108 (82%), Positives = 96/108 (89%), Gaps = 0/108 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LPDD V LVVEVFRMLADATRVQ+LW+L REMSVN+LA +GKPAPSVSQHLAKLRMAR Sbjct 12 LPDDHVGLVVEVFRMLADATRVQLLWALGSREMSVNDLAAHIGKPAPSVSQHLAKLRMAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGL 117 LVRTRR+GTTIFY L+N+HVRQLV DAV+NAEHAGPGIP HHR A L Sbjct 72 LVRTRREGTTIFYSLDNDHVRQLVTDAVYNAEHAGPGIPGHHRDATEL 119 >gi|120404202|ref|YP_954031.1| regulatory protein ArsR [Mycobacterium vanbaalenii PYR-1] gi|119957020|gb|ABM14025.1| transcriptional regulator, ArsR family [Mycobacterium vanbaalenii PYR-1] Length=136 Score = 182 bits (462), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 86/108 (80%), Positives = 96/108 (89%), Gaps = 0/108 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LPDDQV LVVEVFRMLADATRVQ+LW+L REMSVN+LA V KPAPSVSQHLAKLRMAR Sbjct 12 LPDDQVNLVVEVFRMLADATRVQILWALVSREMSVNDLAAHVNKPAPSVSQHLAKLRMAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGL 117 LVRTRR+GT++FY L+N+H+RQLV DAVFNAEHAGPG+P HHR A L Sbjct 72 LVRTRREGTSVFYSLDNDHIRQLVTDAVFNAEHAGPGVPGHHRDAAEL 119 >gi|111022337|ref|YP_705309.1| ArsR family transcriptional regulator [Rhodococcus jostii RHA1] gi|110821867|gb|ABG97151.1| probable transcriptional regulator, ArsR family protein [Rhodococcus jostii RHA1] Length=136 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/107 (83%), Positives = 96/107 (90%), Gaps = 0/107 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 L +DQV LVVEVFRMLADATRVQVLW L E+SVNELAE+VGKPAPSVSQHLAKLRMAR Sbjct 12 LDEDQVGLVVEVFRMLADATRVQVLWQLVGGELSVNELAERVGKPAPSVSQHLAKLRMAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGG 116 LVRTRR+GT+I+Y + NEHV+QLV DAVFNAEHAGPGIP HHRA GG Sbjct 72 LVRTRREGTSIYYSVANEHVQQLVTDAVFNAEHAGPGIPGHHRATGG 118 >gi|169629688|ref|YP_001703337.1| ArsR family transcriptional regulator [Mycobacterium abscessus ATCC 19977] gi|169241655|emb|CAM62683.1| Putative transcriptional regulator, ArsR family [Mycobacterium abscessus] Length=127 Score = 182 bits (461), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 88/112 (79%), Positives = 98/112 (88%), Gaps = 0/112 (0%) Query 9 PLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMA 68 PL D+QV LVVEVFRMLADATRV+VLW+L E+SVNELA+ VGKPAPSVSQHLAKLRMA Sbjct 11 PLGDEQVGLVVEVFRMLADATRVRVLWALTAGELSVNELADSVGKPAPSVSQHLAKLRMA 70 Query 69 RLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 RLVRTRRDGTT++Y LENEHV QLV DAV+NAEHAGPGIP HHR L++V Sbjct 71 RLVRTRRDGTTVYYSLENEHVEQLVTDAVYNAEHAGPGIPPHHRTEAALRAV 122 >gi|226364874|ref|YP_002782656.1| ArsR family transcriptional regulator [Rhodococcus opacus B4] gi|226243363|dbj|BAH53711.1| putative ArsR family transcriptional regulator [Rhodococcus opacus B4] Length=145 Score = 179 bits (454), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 88/109 (81%), Positives = 96/109 (89%), Gaps = 0/109 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 L +DQV LVVEVFRMLAD TRVQVLW L E+SVNELAE+VGKPAPSVSQHLAKLRMAR Sbjct 26 LDEDQVGLVVEVFRMLADPTRVQVLWQLVGGELSVNELAERVGKPAPSVSQHLAKLRMAR 85 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQ 118 LV TRR+GT+I+Y + NEHV+QLV DAVFNAEHAGPGIP HHRAAG LQ Sbjct 86 LVHTRREGTSIYYSVANEHVQQLVTDAVFNAEHAGPGIPGHHRAAGDLQ 134 >gi|317507186|ref|ZP_07964941.1| arsR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] gi|316254522|gb|EFV13837.1| arsR family bacterial regulatory protein [Segniliparus rugosus ATCC BAA-974] Length=138 Score = 176 bits (445), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 88/125 (71%), Positives = 100/125 (80%), Gaps = 4/125 (3%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LPDDQV L+VEVFRML DATRV+VLW+L DRE SVNELAE VGKPA SVSQHLAKLRMAR Sbjct 13 LPDDQVDLIVEVFRMLTDATRVRVLWALVDRECSVNELAEHVGKPASSVSQHLAKLRMAR 72 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGL----QSVAKASA 125 LV+TR++G +FYRLEN+HVRQL+ DAVFNAEHAGP +P HHR L Q+VAK Sbjct 73 LVKTRKEGVQVFYRLENDHVRQLLTDAVFNAEHAGPEVPAHHRGEEELRVLHQNVAKPQR 132 Query 126 TKDVG 130 +G Sbjct 133 RNGLG 137 >gi|126434086|ref|YP_001069777.1| ArsR family transcriptional regulator [Mycobacterium sp. JLS] gi|126233886|gb|ABN97286.1| transcriptional regulator, ArsR family [Mycobacterium sp. JLS] Length=138 Score = 174 bits (441), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 83/111 (75%), Positives = 93/111 (84%), Gaps = 0/111 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LPDD+ LV EVFRMLADATRVQ+LW+L E SVN+LA VGKPAPSVSQHLAKLRMAR Sbjct 12 LPDDEANLVAEVFRMLADATRVQILWALVSHEKSVNDLATHVGKPAPSVSQHLAKLRMAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 LVRTRR+GTTI+Y L+N HV QLV DAVFNAEHAGPG+P HHR A L ++ Sbjct 72 LVRTRREGTTIYYSLDNNHVAQLVTDAVFNAEHAGPGVPGHHRDASDLAAL 122 >gi|333922041|ref|YP_004495622.1| putative ArsR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] gi|333484262|gb|AEF42822.1| Putative ArsR family transcriptional regulator [Amycolicicoccus subflavus DQS3-9A1] Length=115 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/102 (78%), Positives = 90/102 (89%), Gaps = 0/102 (0%) Query 17 LVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRD 76 LVVE+FRMLAD TR+ +LW+L DRE+SVNE+A VGKP PSVSQHLAKLRMARLVRTRRD Sbjct 3 LVVEIFRMLADPTRITILWALVDRELSVNEIAAVVGKPGPSVSQHLAKLRMARLVRTRRD 62 Query 77 GTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQ 118 GT +FYR+ENEHVRQLV DAVFNAEHAGPG+P HHRA ++ Sbjct 63 GTQVFYRIENEHVRQLVTDAVFNAEHAGPGVPPHHRAESEIR 104 >gi|108798458|ref|YP_638655.1| ArsR family transcriptional regulator [Mycobacterium sp. MCS] gi|119867558|ref|YP_937510.1| ArsR family transcriptional regulator [Mycobacterium sp. KMS] gi|108768877|gb|ABG07599.1| transcriptional regulator, ArsR family [Mycobacterium sp. MCS] gi|119693647|gb|ABL90720.1| transcriptional regulator, ArsR family [Mycobacterium sp. KMS] Length=151 Score = 171 bits (433), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/123 (70%), Positives = 97/123 (79%), Gaps = 4/123 (3%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LP D+ LV EVFRMLADATRVQ+LW+L E SVN+LA VGKPAPSVSQHLAKLRMAR Sbjct 25 LPGDEANLVAEVFRMLADATRVQILWALVSHEKSVNDLATHVGKPAPSVSQHLAKLRMAR 84 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQS----VAKASA 125 LVRTRR+GTTI+Y L+N HV QLV DAVFNAEHAGPG+P HHR A L + V AS Sbjct 85 LVRTRREGTTIYYSLDNNHVAQLVTDAVFNAEHAGPGVPGHHRDASDLAALHADVPAASP 144 Query 126 TKD 128 +K+ Sbjct 145 SKN 147 >gi|343928430|ref|ZP_08767878.1| putative ArsR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] gi|343761615|dbj|GAA14804.1| putative ArsR family transcriptional regulator [Gordonia alkanivorans NBRC 16433] Length=114 Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 83/104 (80%), Positives = 91/104 (88%), Gaps = 0/104 (0%) Query 17 LVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRD 76 LVVEVFRMLAD TR+Q+LW+LAD EMSV+ELAE VGKP PSVSQHLAKLRMARLVRTRR Sbjct 3 LVVEVFRMLADPTRIQLLWALADTEMSVSELAEVVGKPGPSVSQHLAKLRMARLVRTRRA 62 Query 77 GTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSV 120 GTTI Y LENEHVR+LV DAVFNAEHAGPG+P HHR L++V Sbjct 63 GTTIHYSLENEHVRRLVTDAVFNAEHAGPGVPPHHRGDAALRAV 106 >gi|262203029|ref|YP_003274237.1| ArsR family transcriptional regulator [Gordonia bronchialis DSM 43247] gi|262086376|gb|ACY22344.1| regulatory protein ArsR [Gordonia bronchialis DSM 43247] Length=127 Score = 166 bits (420), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 82/103 (80%), Positives = 90/103 (88%), Gaps = 0/103 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 L DDQV LVVEVFRMLAD TRV++LW+LAD E+SV+ELA VGK SVSQHLAKLRM+R Sbjct 11 LADDQVALVVEVFRMLADPTRVRLLWALADAELSVSELAVAVGKAPSSVSQHLAKLRMSR 70 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHR 112 LVRTRRDGTTIFY LEN+HVRQLV DAV NAEHAGPG+P HHR Sbjct 71 LVRTRRDGTTIFYGLENDHVRQLVFDAVRNAEHAGPGVPAHHR 113 >gi|84496074|ref|ZP_00994928.1| probable transcriptional regulatory protein [Janibacter sp. HTCC2649] gi|84382842|gb|EAP98723.1| probable transcriptional regulatory protein [Janibacter sp. HTCC2649] Length=117 Score = 160 bits (405), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 76/106 (72%), Positives = 87/106 (83%), Gaps = 0/106 (0%) Query 10 LPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 LP +QV L VEVFRML+D TR++VLW+L + E+SVNELAE GKPAP+VSQHLAKLRMAR Sbjct 4 LPSEQVELAVEVFRMLSDGTRIRVLWALLEAELSVNELAEAAGKPAPAVSQHLAKLRMAR 63 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAG 115 LVRTRRDG +FYRLEN+HV LV DAV NAEHA G+P HHR A Sbjct 64 LVRTRRDGNQVFYRLENDHVANLVRDAVHNAEHASDGVPSHHRGAA 109 >gi|119952329|ref|YP_950002.1| ArsR family transcriptional regulator [Arthrobacter aurescens TC1] gi|42558792|gb|AAS20132.1| predicted transcriptional regulator ArsR [Arthrobacter aurescens] gi|119951459|gb|ABM10369.1| putative transcriptional regulator, ArsR family [Arthrobacter aurescens TC1] Length=127 Score = 137 bits (345), Expect = 5e-31, Method: Compositional matrix adjust. Identities = 68/98 (70%), Positives = 78/98 (80%), Gaps = 0/98 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L VEVF MLADATRV+++ +L D E+SVNELAE VGK VSQHLAKLRMAR+V TR Sbjct 23 VELAVEVFSMLADATRVRIILALRDTELSVNELAETVGKSPAGVSQHLAKLRMARIVATR 82 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHR 112 ++GT +FYRLENEH RQLV DA+F AEHA PRHHR Sbjct 83 QNGTRVFYRLENEHARQLVADAIFQAEHALGETPRHHR 120 >gi|289744551|ref|ZP_06503929.1| LOW QUALITY PROTEIN: hypothetical transcriptional regulatory protein [Mycobacterium tuberculosis 02_1987] gi|289685079|gb|EFD52567.1| LOW QUALITY PROTEIN: hypothetical transcriptional regulatory protein [Mycobacterium tuberculosis 02_1987] Length=130 Score = 131 bits (329), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 62/62 (100%), Positives = 62/62 (100%), Gaps = 0/62 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ Sbjct 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 Query 61 HL 62 HL Sbjct 61 HL 62 >gi|326331211|ref|ZP_08197505.1| transcriptional regulator, ArsR family [Nocardioidaceae bacterium Broad-1] gi|325950981|gb|EGD43027.1| transcriptional regulator, ArsR family [Nocardioidaceae bacterium Broad-1] Length=133 Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 65/114 (58%), Positives = 82/114 (72%), Gaps = 0/114 (0%) Query 1 MYADSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQ 60 M+A++ P DD V L VEV RMLAD TR+QV L D E SV+ELA + KP P VSQ Sbjct 16 MHANTQPPVWGDDVVTLAVEVLRMLADPTRLQVAGLLLDEERSVSELAGMLDKPVPGVSQ 75 Query 61 HLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAA 114 HLAK+RMARLV TR++GT++ YR+EN HVRQLV+D + + EH +P HHR+A Sbjct 76 HLAKMRMARLVTTRKEGTSVLYRVENGHVRQLVLDTIGHVEHLLDQVPAHHRSA 129 >gi|269796936|ref|YP_003316391.1| ArsR family transcriptional regulator [Sanguibacter keddieii DSM 10542] gi|269099121|gb|ACZ23557.1| transcriptional regulator, ArsR family [Sanguibacter keddieii DSM 10542] Length=144 Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/115 (56%), Positives = 81/115 (71%), Gaps = 2/115 (1%) Query 4 DSGPDPLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLA 63 DS + D V L VEVF M ADATR++++ +L D E+ V +AE VGK +VSQHLA Sbjct 25 DSRRGEIEDHLVELAVEVFAMFADATRLRIVLALRDGELPVARIAETVGKSPSAVSQHLA 84 Query 64 KLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPR--HHRAAGG 116 KLRMAR+V TR+DGT +FYRL +EHVR+LV DA++ AEH G+PR HH A G Sbjct 85 KLRMARMVSTRQDGTRVFYRLTDEHVRELVTDAIYQAEHVAEGLPRLHHHEADDG 139 >gi|88856552|ref|ZP_01131209.1| predicted transcriptional regulator [marine actinobacterium PHSC20C1] gi|88814206|gb|EAR24071.1| predicted transcriptional regulator [marine actinobacterium PHSC20C1] Length=123 Score = 123 bits (308), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 60/100 (60%), Positives = 75/100 (75%), Gaps = 0/100 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L VEVF MLADATRV+++ +L E+SV+ L++ VGK SVSQHLAKLR+AR+V TR Sbjct 16 VELAVEVFSMLADATRVRIILALRSNELSVSHLSDIVGKSPASVSQHLAKLRLARIVHTR 75 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAA 114 +DGT IFYRL NEH QLV +A+F AEH+ P HHR + Sbjct 76 QDGTKIFYRLANEHASQLVSEAIFQAEHSLSSEPAHHRTS 115 >gi|116662430|ref|YP_829483.1| ArsR family transcriptional regulator [Arthrobacter sp. FB24] gi|116613209|gb|ABK05902.1| transcriptional regulator, ArsR family [Arthrobacter sp. FB24] Length=121 Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/106 (56%), Positives = 77/106 (73%), Gaps = 1/106 (0%) Query 11 PDDQ-VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 PD + V L EVF MLADATRV+++ +L D E+SVN LA+ V K +VSQHLAK+R+AR Sbjct 12 PDSRFVDLAAEVFAMLADATRVRIILALRDGELSVNHLADIVDKTPAAVSQHLAKMRLAR 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAG 115 V TR+DGT +FYRLE++H R LV +A+ AEH+ G PRHH + Sbjct 72 FVATRQDGTRVFYRLEDDHARHLVTEAILQAEHSLDGTPRHHHSGS 117 >gi|336321901|ref|YP_004601869.1| regulatory protein ArsR [Cellvibrio gilvus ATCC 13127] gi|336105482|gb|AEI13301.1| regulatory protein ArsR [Cellvibrio gilvus ATCC 13127] Length=119 Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 59/99 (60%), Positives = 74/99 (75%), Gaps = 0/99 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L VEVF MLADATRV+++ +L E++V +LA+ VGK VSQHLAKLR+AR+V TR Sbjct 17 VELAVEVFAMLADATRVRIILALRGGELAVGDLAQAVGKSPTVVSQHLAKLRLARMVTTR 76 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRA 113 +GT +FY+L +EH RQLV DAVF AEH+ PRHH A Sbjct 77 HEGTRVFYKLADEHARQLVTDAVFQAEHSIDAHPRHHHA 115 >gi|336119958|ref|YP_004574736.1| ArsR family transcriptional regulator [Microlunatus phosphovorus NM-1] gi|334687748|dbj|BAK37333.1| ArsR family transcriptional regulator [Microlunatus phosphovorus NM-1] Length=124 Score = 115 bits (288), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 58/99 (59%), Positives = 74/99 (75%), Gaps = 1/99 (1%) Query 13 DQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVR 72 D V L VE+F MLAD TRV+++ +L E SVN LA VGKP+ +VSQHLAKLR+AR++ Sbjct 16 DLVALAVEIFAMLADPTRVKIILTLIGGESSVNNLAVAVGKPSSAVSQHLAKLRLARILL 75 Query 73 TRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHH 111 TR++G ++YRL NEHV QLV DA+ AEH+ G PRHH Sbjct 76 TRQEGNRVYYRLANEHVAQLVTDALHQAEHS-IGHPRHH 113 >gi|309811540|ref|ZP_07705321.1| transcriptional regulator, ArsR family [Dermacoccus sp. Ellin185] gi|308434510|gb|EFP58361.1| transcriptional regulator, ArsR family [Dermacoccus sp. Ellin185] Length=123 Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 62/105 (60%), Positives = 77/105 (74%), Gaps = 4/105 (3%) Query 11 PDDQ-VCLVVEVFRMLADATRVQVLWSL-ADREMSVNELAEQVGKPAPSVSQHLAKLRMA 68 PD Q V L VEVF +LADATRV+++ +L A E+SVN LA+ V K +VSQHLA+LRMA Sbjct 12 PDSQYVELAVEVFGLLADATRVRIILALRASDELSVNHLADIVDKSPAAVSQHLARLRMA 71 Query 69 RLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEH--AGPGIPRHH 111 R+V TR++G +FYRLENEH QLV DA+F AEH A +P HH Sbjct 72 RIVSTRQEGQRVFYRLENEHASQLVTDAIFQAEHSVAEGHVPAHH 116 >gi|334337721|ref|YP_004542873.1| transcriptional regulator, ArsR family [Isoptericola variabilis 225] gi|334108089|gb|AEG44979.1| transcriptional regulator, ArsR family [Isoptericola variabilis 225] Length=124 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/99 (58%), Positives = 70/99 (71%), Gaps = 0/99 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L EVF +LADATRV+++ +L + E SV+ LAE VGK +VSQHLAKLR R+VRTR Sbjct 17 VELAAEVFSLLADATRVRIILALGEGEQSVSALAETVGKSPTAVSQHLAKLRWGRIVRTR 76 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRA 113 +DGT +FY L +EH R LV AVF A+HA P HH A Sbjct 77 QDGTRVFYSLVDEHARNLVTQAVFQAQHAVDDPPAHHGA 115 >gi|62391617|ref|YP_227019.1| ArsR family regulatory protein [Corynebacterium glutamicum ATCC 13032] gi|41326959|emb|CAF20803.1| Bacterial regulatory proteins, ArsR family [Corynebacterium glutamicum ATCC 13032] Length=114 Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/107 (57%), Positives = 76/107 (72%), Gaps = 5/107 (4%) Query 11 PDDQ-VCLVVEVFRMLADATRVQVLWSLADR-EMSVNELAEQVGKPAPSVSQHLAKLRMA 68 PD Q V L VEVF +LADATRV+++ +L + E+SVN LA+ V K +VSQHLA+LRMA Sbjct 3 PDSQYVELAVEVFGLLADATRVRIILALRNSGELSVNHLADIVDKSPAAVSQHLARLRMA 62 Query 69 RLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHA---GPGIPRHHR 112 R+V TR++G +FY+L NEH QLV DA+F AEH G P HHR Sbjct 63 RIVSTRQEGQRVFYKLTNEHASQLVSDAIFQAEHTIADGQTPPHHHR 109 >gi|336120886|ref|YP_004575672.1| ArsR family transcriptional regulator [Microlunatus phosphovorus NM-1] gi|334688684|dbj|BAK38269.1| ArsR family transcriptional regulator [Microlunatus phosphovorus NM-1] Length=121 Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 63/118 (54%), Positives = 77/118 (66%), Gaps = 7/118 (5%) Query 1 MYADSGPD------PLPDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKP 54 M AD+ D P+ V L VEVF MLAD TRV+++ +L E+ VN +A V K Sbjct 1 MRADNQRDRVEVAGPVDAQFVELAVEVFSMLADPTRVRIVLALQGGELPVNTIATAVDKA 60 Query 55 APSVSQHLAKLRMARLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHR 112 SVSQHLAKLR+AR+V +R+DG +FYRL NEH QLV DA+ AEHA G PRHHR Sbjct 61 PASVSQHLAKLRLARIVASRQDGNRVFYRLANEHAAQLVTDAIHQAEHA-LGQPRHHR 117 >gi|23308976|ref|NP_601975.2| transcriptional regulator [Corynebacterium glutamicum ATCC 13032] gi|21325554|dbj|BAC00176.1| Predicted transcriptional regulators [Corynebacterium glutamicum ATCC 13032] Length=129 Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 60/107 (57%), Positives = 76/107 (72%), Gaps = 5/107 (4%) Query 11 PDDQ-VCLVVEVFRMLADATRVQVLWSLADR-EMSVNELAEQVGKPAPSVSQHLAKLRMA 68 PD Q V L VEVF +LADATRV+++ +L + E+SVN LA+ V K +VSQHLA+LRMA Sbjct 18 PDSQYVELAVEVFGLLADATRVRIILALRNSGELSVNHLADIVDKSPAAVSQHLARLRMA 77 Query 69 RLVRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHA---GPGIPRHHR 112 R+V TR++G +FY+L NEH QLV DA+F AEH G P HHR Sbjct 78 RIVSTRQEGQRVFYKLTNEHASQLVSDAIFQAEHTIADGQTPPHHHR 124 >gi|332668890|ref|YP_004451898.1| regulatory protein ArsR [Cellulomonas fimi ATCC 484] gi|332337928|gb|AEE44511.1| regulatory protein ArsR [Cellulomonas fimi ATCC 484] Length=121 Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 54/102 (53%), Positives = 71/102 (70%), Gaps = 0/102 (0%) Query 11 PDDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARL 70 PD+ + VEV R+LAD TR+ +L L EM VN +AE +G+PAP+VSQHLA+LR RL Sbjct 18 PDEDLDHAVEVLRLLADRTRLAILAMLDGTEMPVNAIAEALGRPAPAVSQHLARLRAGRL 77 Query 71 VRTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHR 112 V +RRDGTT+FY +EHV LV + + + EHA +P HHR Sbjct 78 VTSRRDGTTVFYGQPDEHVAALVANVLQHTEHALYDVPPHHR 119 >gi|46205509|ref|ZP_00048463.2| COG0640: Predicted transcriptional regulators [Magnetospirillum magnetotacticum MS-1] Length=164 Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 59/111 (54%), Positives = 74/111 (67%), Gaps = 1/111 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L EVF +LADATRV+++ +L D E+ VN LAE VGK +VSQHLAKLR R+VR R Sbjct 17 VELAAEVFSLLADATRVRIVLALRDAELPVNALAEVVGKSPTAVSQHLAKLRWGRIVRAR 76 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGLQSVAKASA 125 ++G +FY L +EH R LV AVF A+HA P+HH A G Q+ K A Sbjct 77 QEGNRVFYSLVDEHARTLVTQAVFQAQHAVDDHPQHH-ADGAHQAAEKPPA 126 >gi|334697489|gb|AEG82286.1| ArsR-family transcription regulator [Corynebacterium ulcerans 809] Length=132 Score = 104 bits (260), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 52/108 (49%), Positives = 71/108 (66%), Gaps = 2/108 (1%) Query 11 PDDQVC-LVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 P+ Q EVF +L+DATRV+++ +L D E SVNELAE++ K + SQHLAKLR + Sbjct 12 PESQYANFAAEVFTLLSDATRVRIILALRDTEKSVNELAEEISKSPTTTSQHLAKLRWGK 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNA-EHAGPGIPRHHRAAGG 116 +V R+DG +FYRL ++H R+LV AVF+A +H P HHR G Sbjct 72 IVEARQDGNRVFYRLIDDHARELVTHAVFHAQQHVAGSAPTHHRNPDG 119 >gi|297625703|ref|YP_003687466.1| ArsR family transcriptional regulator [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296921468|emb|CBL56022.1| Transcriptional regulator, ArsR family [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length=141 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 51/103 (50%), Positives = 73/103 (71%), Gaps = 0/103 (0%) Query 15 VCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTR 74 V L EVF +L+DATR++++ +L D E+SV +LA++V K +VSQHLAKLR ++V+ R Sbjct 17 VDLAAEVFSLLSDATRIRIILALRDGELSVGDLADRVRKSPTAVSQHLAKLRWGKIVQAR 76 Query 75 RDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRAAGGL 117 ++GT +FY L +EH R+LV AVF AEH G+P HH G+ Sbjct 77 QEGTRVFYSLIDEHARKLVAQAVFQAEHVVGGVPPHHLNGEGV 119 >gi|337291464|ref|YP_004630485.1| ArsR family transcription regulator [Corynebacterium ulcerans BR-AD22] gi|334699770|gb|AEG84566.1| ArsR-family transcription regulator [Corynebacterium ulcerans BR-AD22] Length=132 Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 52/108 (49%), Positives = 71/108 (66%), Gaps = 2/108 (1%) Query 11 PDDQVC-LVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMAR 69 P+ Q EVF +L+DATRV+++ +L D E SVNELAE++ K + SQHLAKLR + Sbjct 12 PESQYANFAAEVFTLLSDATRVRIILALRDTEKSVNELAEEISKSPTTTSQHLAKLRWGK 71 Query 70 LVRTRRDGTTIFYRLENEHVRQLVIDAVFNA-EHAGPGIPRHHRAAGG 116 +V R+DG +FYRL ++H R+LV AVF+A +H P HHR G Sbjct 72 IVEARQDGNRVFYRLIDDHARELVTHAVFHAQQHVAGSAPMHHRNPDG 119 >gi|336179960|ref|YP_004585335.1| ArsR family transcriptional regulator [Frankia symbiont of Datisca glomerata] gi|334860940|gb|AEH11414.1| transcriptional regulator, ArsR family [Frankia symbiont of Datisca glomerata] Length=128 Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 51/102 (50%), Positives = 70/102 (69%), Gaps = 0/102 (0%) Query 12 DDQVCLVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLV 71 D+QV L E FR+LAD TR+++LW+L E SV LAE VG +VSQHLAKLR+A LV Sbjct 13 DEQVHLAAEAFRLLADPTRIKILWALLHGESSVACLAELVGAAPTAVSQHLAKLRLAGLV 72 Query 72 RTRRDGTTIFYRLENEHVRQLVIDAVFNAEHAGPGIPRHHRA 113 R RR+GT ++Y + HV+ L+ + +F+A+HA +P H R Sbjct 73 RGRREGTFVYYSAADVHVQALLTEGLFHADHADRDLPDHPRG 114 >gi|300859095|ref|YP_003784078.1| ArsR family transcriptional regulator [Corynebacterium pseudotuberculosis FRC41] gi|300686549|gb|ADK29471.1| ArsR-family transcription regulator [Corynebacterium pseudotuberculosis FRC41] gi|302206802|gb|ADL11144.1| HTH-type transcriptional regulator CmtR [Corynebacterium pseudotuberculosis C231] gi|302331356|gb|ADL21550.1| HTH-type transcriptional regulator CmtR [Corynebacterium pseudotuberculosis 1002] gi|308277048|gb|ADO26947.1| ArsR family transcriptional regulator [Corynebacterium pseudotuberculosis I19] gi|341825486|gb|AEK93007.1| HTH-type transcriptional regulator CmtR [Corynebacterium pseudotuberculosis PAT10] Length=132 Score = 100 bits (249), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 50/101 (50%), Positives = 68/101 (68%), Gaps = 1/101 (0%) Query 17 LVVEVFRMLADATRVQVLWSLADREMSVNELAEQVGKPAPSVSQHLAKLRMARLVRTRRD 76 EVF +L+DATRV+++ +L D E SVNELAE++GK + SQHLAKLR ++V R+D Sbjct 19 FAAEVFTLLSDATRVRIILALRDAEKSVNELAEEIGKSPTTTSQHLAKLRWGKIVEARQD 78 Query 77 GTTIFYRLENEHVRQLVIDAVFNAEHAGPGI-PRHHRAAGG 116 G +FYRL + H R+LV AVF+A+ P HHR + G Sbjct 79 GNRVFYRLIDAHARELVTLAVFHAQRCVVNTAPAHHRNSDG 119 Lambda K H 0.320 0.133 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127765705240 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40