BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0831c

Length=271
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15840242|ref|NP_335279.1|  hypothetical protein MT0852 [Mycoba...   552    2e-155
gi|15607971|ref|NP_215346.1|  hypothetical protein Rv0831c [Mycob...   551    3e-155
gi|289442234|ref|ZP_06431978.1|  conserved hypothetical protein [...   550    1e-154
gi|339293846|gb|AEJ45957.1|  hypothetical protein CCDC5079_0767 [...   550    1e-154
gi|289760960|ref|ZP_06520338.1|  conserved hypothetical protein [...   527    7e-148
gi|183984817|ref|YP_001853108.1|  hypothetical protein MMAR_4849 ...   469    2e-130
gi|240171876|ref|ZP_04750535.1|  hypothetical protein MkanA1_2135...   463    1e-128
gi|54023545|ref|YP_117787.1|  hypothetical protein nfa15770 [Noca...   180    2e-43 
gi|336120957|ref|YP_004575744.1|  hypothetical protein MLP_53270 ...   130    2e-28 
gi|308231528|ref|ZP_07412778.2|  conserved membrane protein [Myco...   120    2e-25 
gi|15607488|ref|NP_214861.1|  hypothetical protein Rv0347 [Mycoba...   120    2e-25 
gi|323721256|gb|EGB30314.1|  membrane protein [Mycobacterium tube...   120    2e-25 
gi|240171632|ref|ZP_04750291.1|  hypothetical protein MkanA1_2011...   100    3e-19 
gi|289568258|ref|ZP_06448485.1|  LOW QUALITY PROTEIN: conserved m...  77.8    2e-12 
gi|336120556|ref|YP_004575342.1|  hypothetical protein MLP_49250 ...  66.6    4e-09 
gi|220915153|ref|YP_002490457.1|  hypothetical protein A2cp1_0030...  57.0    3e-06 
gi|269957820|ref|YP_003327609.1|  hypothetical protein Xcel_3046 ...  47.8    0.002 
gi|167566722|ref|ZP_02359638.1|  hypothetical protein BoklE_29451...  45.1    0.010 
gi|337767922|emb|CCB76635.1|  conserved protein of unknown functi...  43.5    0.034 
gi|30250464|ref|NP_842534.1|  hypothetical protein NE2545 [Nitros...  43.5    0.035 
gi|300865780|ref|ZP_07110535.1|  conserved hypothetical protein [...  42.7    0.057 
gi|344342584|ref|ZP_08773455.1|  hypothetical protein MarpuDRAFT_...  40.4    0.28  
gi|240171062|ref|ZP_04749721.1|  hypothetical protein MkanA1_1725...  40.0    0.35  
gi|222112336|ref|YP_002554600.1|  hypothetical protein Dtpsy_3168...  39.3    0.60  
gi|111023445|ref|YP_706417.1|  dihydroxy-acid dehydratase [Rhodoc...  37.7    1.7   
gi|154495777|ref|ZP_02034473.1|  hypothetical protein BACCAP_0005...  37.0    3.5   
gi|300113075|ref|YP_003759650.1|  hypothetical protein Nwat_0359 ...  36.6    4.5   
gi|87306732|ref|ZP_01088879.1|  hypothetical protein DSM3645_1037...  36.2    5.4   


>gi|15840242|ref|NP_335279.1| hypothetical protein MT0852 [Mycobacterium tuberculosis CDC1551]
 gi|13880400|gb|AAK45093.1| hypothetical protein MT0852 [Mycobacterium tuberculosis CDC1551]
Length=305

 Score =  552 bits (1422),  Expect = 2e-155, Method: Compositional matrix adjust.
 Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM
Sbjct  35   MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  94

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV
Sbjct  95   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  154

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR
Sbjct  155  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  214

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA
Sbjct  215  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  274

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271
            LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ
Sbjct  275  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  305


>gi|15607971|ref|NP_215346.1| hypothetical protein Rv0831c [Mycobacterium tuberculosis H37Rv]
 gi|31792019|ref|NP_854512.1| hypothetical protein Mb0854c [Mycobacterium bovis AF2122/97]
 gi|121636755|ref|YP_976978.1| hypothetical protein BCG_0884c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 69 more sequence titles
 Length=271

 Score =  551 bits (1421),  Expect = 3e-155, Method: Compositional matrix adjust.
 Identities = 271/271 (100%), Positives = 271/271 (100%), Gaps = 0/271 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM
Sbjct  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV
Sbjct  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR
Sbjct  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA
Sbjct  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271
            LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ
Sbjct  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271


>gi|289442234|ref|ZP_06431978.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289568784|ref|ZP_06449011.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289749347|ref|ZP_06508725.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289415153|gb|EFD12393.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289542538|gb|EFD46186.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289689934|gb|EFD57363.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length=271

 Score =  550 bits (1416),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM
Sbjct  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV
Sbjct  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVGLERIGLRFVLEIRVPAGVDGRI WSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR
Sbjct  121  SSIVGLERIGLRFVLEIRVPAGVDGRIMWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA
Sbjct  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271
            LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ
Sbjct  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271


>gi|339293846|gb|AEJ45957.1| hypothetical protein CCDC5079_0767 [Mycobacterium tuberculosis 
CCDC5079]
Length=271

 Score =  550 bits (1416),  Expect = 1e-154, Method: Compositional matrix adjust.
 Identities = 270/271 (99%), Positives = 270/271 (99%), Gaps = 0/271 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANR LKHLLINDLPIERQAQDVSWGM
Sbjct  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRALKHLLINDLPIERQAQDVSWGM  60

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV
Sbjct  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR
Sbjct  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA
Sbjct  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271
            LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ
Sbjct  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLRQ  271


>gi|289760960|ref|ZP_06520338.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289708466|gb|EFD72482.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=297

 Score =  527 bits (1357),  Expect = 7e-148, Method: Compositional matrix adjust.
 Identities = 258/258 (100%), Positives = 258/258 (100%), Gaps = 0/258 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM
Sbjct  35   MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  94

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV
Sbjct  95   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  154

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR
Sbjct  155  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  214

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA
Sbjct  215  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  274

Query  241  LVSTFQDLYGPAQVVFQE  258
            LVSTFQDLYGPAQVVFQE
Sbjct  275  LVSTFQDLYGPAQVVFQE  292


>gi|183984817|ref|YP_001853108.1| hypothetical protein MMAR_4849 [Mycobacterium marinum M]
 gi|183178143|gb|ACC43253.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=270

 Score =  469 bits (1207),  Expect = 2e-130, Method: Compositional matrix adjust.
 Identities = 226/270 (84%), Positives = 245/270 (91%), Gaps = 1/270 (0%)

Query  1    MLPETNQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGM  60
            MLPE N D VQPNAPVALVT EIRHP TDSLTES++RELKHLLINDLPIERQAQDVSWGM
Sbjct  1    MLPEMNPDGVQPNAPVALVTAEIRHPATDSLTESSSRELKHLLINDLPIERQAQDVSWGM  60

Query  61   TAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQV  120
            TAPG APTPVADRFVRY NRDNT +ASLKNQAIVVET+AY SF+ F D+++RV DARAQV
Sbjct  61   TAPGAAPTPVADRFVRYGNRDNTVSASLKNQAIVVETSAYSSFDNFCDILLRVADARAQV  120

Query  121  SSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYR  180
            SSIVG+ERIGLR+VLEIRVPAGVDGRI WSNWIDEQLLGPQR  PGGL + EWQGAAVYR
Sbjct  121  SSIVGVERIGLRYVLEIRVPAGVDGRIAWSNWIDEQLLGPQRIAPGGLSMAEWQGAAVYR  180

Query  181  ELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
            E QPGKSLI+RYGPGMGQALD NYHLRR+T AQTGPFFL+DIDSFWTP  GSIPE+NRDA
Sbjct  181  EAQPGKSLILRYGPGMGQALDANYHLRRVTAAQTGPFFLMDIDSFWTPL-GSIPEFNRDA  239

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKDELLR  270
            LVST QDLYGPA+ VFQ++IT RL+DELLR
Sbjct  240  LVSTLQDLYGPAREVFQDLITPRLRDELLR  269


>gi|240171876|ref|ZP_04750535.1| hypothetical protein MkanA1_21350 [Mycobacterium kansasii ATCC 
12478]
Length=267

 Score =  463 bits (1191),  Expect = 1e-128, Method: Compositional matrix adjust.
 Identities = 222/266 (84%), Positives = 242/266 (91%), Gaps = 0/266 (0%)

Query  6    NQDEVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGG  65
            +QD +QPNAPVALVT+EIRHP TDSLTES +RELKHLLINDLPIERQAQDVSWG+TAPG 
Sbjct  2    SQDGIQPNAPVALVTMEIRHPATDSLTESTSRELKHLLINDLPIERQAQDVSWGVTAPGA  61

Query  66   APTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVG  125
            APTPVADRFVRY NRDNT +ASLKNQAIVVET+AYR FE F D+V+RV DARAQVSSIVG
Sbjct  62   APTPVADRFVRYGNRDNTVSASLKNQAIVVETSAYRDFETFCDLVLRVADARAQVSSIVG  121

Query  126  LERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQPG  185
            +ERIGLR+VLEIRVP GVDGR+ W NWIDEQLLGP R  PGGL LTEWQGAAVYRE QPG
Sbjct  122  VERIGLRYVLEIRVPVGVDGRVNWGNWIDEQLLGPYRIAPGGLSLTEWQGAAVYREPQPG  181

Query  186  KSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTF  245
            KSLI+RYGPG+GQALD +YHLRRITP QTGPFFL+DIDSFWTP GGSIPEYNRDALVST 
Sbjct  182  KSLILRYGPGVGQALDQSYHLRRITPPQTGPFFLMDIDSFWTPVGGSIPEYNRDALVSTL  241

Query  246  QDLYGPAQVVFQEMITSRLKDELLRQ  271
             DLYGPA+ VFQ++IT+RLKDELLRQ
Sbjct  242  TDLYGPAREVFQDLITARLKDELLRQ  267


>gi|54023545|ref|YP_117787.1| hypothetical protein nfa15770 [Nocardia farcinica IFM 10152]
 gi|54015053|dbj|BAD56423.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=261

 Score =  180 bits (456),  Expect = 2e-43, Method: Compositional matrix adjust.
 Identities = 101/258 (40%), Positives = 151/258 (59%), Gaps = 8/258 (3%)

Query  13   NAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVAD  72
            N P+A+V VEIRH  TD++TE   R ++  L +  PIE  A+DV+  +   G  P+P   
Sbjct  9    NPPIAMVAVEIRHSGTDTVTEEGYRAIRQQLRHQWPIELPAKDVA--IEFEGTNPSPTVV  66

Query  73   RFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGLR  132
             + RY +RD  TA  ++  A  VET  Y+ +E     +   +D RA VS   G  R+GLR
Sbjct  67   EYRRYASRDLATAIVVRPGATTVETVDYKGWETLRQTLKAALDVRAAVSEPSGYVRVGLR  126

Query  133  FVLEIRVPAGVDGRI-TWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQPGKSLIVR  191
            ++ E+RVP   DG    WS W+   LL  Q     GL L +W G + ++    G  +++R
Sbjct  127  YIDEVRVPG--DGIAPDWSEWMHPSLLAAQPDDTAGLPLHDWHGLSAFKPAD-GHMVVLR  183

Query  192  YGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTFQDLYGP  251
            YGP  G A++P+ HL+R + + TGPFFLLDIDSFW  + GSIPE+  D LV+   +L+ P
Sbjct  184  YGPRTGYAVEPDGHLKRPS-SPTGPFFLLDIDSFWEVT-GSIPEFAPDELVTKCDNLHAP  241

Query  252  AQVVFQEMITSRLKDELL  269
             + +F+ ++T +L+ E+ 
Sbjct  242  IRKLFEGLVTDKLRKEVF  259


>gi|336120957|ref|YP_004575744.1| hypothetical protein MLP_53270 [Microlunatus phosphovorus NM-1]
 gi|334688756|dbj|BAK38341.1| hypothetical protein MLP_53270 [Microlunatus phosphovorus NM-1]
Length=273

 Score =  130 bits (328),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 91/267 (35%), Positives = 145/267 (55%), Gaps = 8/267 (2%)

Query  9    EVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAP-  67
            E+ P+AP+ L+ +E+RHP  + L      ++   + + LP+  +  +VS  + A    P 
Sbjct  8    EIYPSAPIVLMAIEVRHPLCEPLDRKQVTDMSARVKHLLPLPSEMNEVSVTVQAGSDGPP  67

Query  68   --TPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVG  125
                V   F R+ +RD  TA S++  ++V+ETT Y S++   +++  V+ AR  V++  G
Sbjct  68   VQQQVVRSFPRWTSRDKRTALSVRPDSLVIETTNYGSYDRMRELLDIVLLARLAVAAPAG  127

Query  126  LERIGLRFVLEIRVPAGVDGRI-TWSNWIDEQLLGPQRFTPG-GLVLTEWQGAAVYRELQ  183
            +ERIGLR++ EIRVPA     + TW  W+D  LLGP        LV    +G  V+    
Sbjct  128  VERIGLRYIDEIRVPAENGSSVPTWEQWVDASLLGPAHVGAELSLVPVVNEGVFVFSG-G  186

Query  184  PGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVS  243
               +L++RYG     A+     LRR      GP F LDIDSFW  +   +PE++ D ++ 
Sbjct  187  SDHALVLRYGAQSDYAVQSTPDLRRPL-PPPGPLFKLDIDSFWQ-AADEVPEFDVDLILR  244

Query  244  TFQDLYGPAQVVFQEMITSRLKDELLR  270
                L+ P + VF+ +IT RL++E+LR
Sbjct  245  QADALHEPVRGVFESVITDRLREEVLR  271


>gi|308231528|ref|ZP_07412778.2| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
 gi|308369370|ref|ZP_07417524.2| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
 gi|308370381|ref|ZP_07421296.2| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
 19 more sequence titles
 Length=270

 Score =  120 bits (302),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 86/262 (33%), Positives = 129/262 (50%), Gaps = 8/262 (3%)

Query  12   PNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVA  71
            PN P+ALV +E+RHP T+    SA   LK  L    PI  Q +     +    G  T  +
Sbjct  11   PNDPLALVLIELRHPRTEPPVPSAISILKEELARWTPILEQEEVRQVNLET--GEHTAHS  68

Query  72   DRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGL  131
             +  + V RD  TA + +  A+ +E T Y  +E F  +V  +V AR  V+ + G  RIGL
Sbjct  69   QK--KLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIVHAMVTARQDVAPVDGCIRIGL  126

Query  132  RFVLEIRVPAGVDGRITWSNWIDEQLLGP-QRFTPGGLVLTEWQGAAVYRELQPGKSLIV  190
            R++ EIR  A +     W+ W+ E LLGP  +     L  T  +        +PG SL +
Sbjct  127  RYINEIR--ASLAEPSGWAYWVAESLLGPGTQLADLKLTTTAQRHVIQCEGPEPGDSLTL  184

Query  191  RYGPGMGQALDPNYHLRRIT-PAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTFQDLY  249
            RY    G  +     L+R+  P   G FFL+DIDS W+     IP  +   +    + L+
Sbjct  185  RYAGARGAVIQSTPFLQRLKEPPAEGDFFLIDIDSAWSDPCKGIPALDAHLVDEVAERLH  244

Query  250  GPAQVVFQEMITSRLKDELLRQ  271
             P   +F+ +ITS L+ ++L+Q
Sbjct  245  TPIGPLFESLITSELRTKVLQQ  266


>gi|15607488|ref|NP_214861.1| hypothetical protein Rv0347 [Mycobacterium tuberculosis H37Rv]
 gi|15839733|ref|NP_334770.1| hypothetical protein MT0362 [Mycobacterium tuberculosis CDC1551]
 gi|31791525|ref|NP_854018.1| hypothetical protein Mb0355 [Mycobacterium bovis AF2122/97]
 53 more sequence titles
 Length=328

 Score =  120 bits (302),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 87/262 (34%), Positives = 130/262 (50%), Gaps = 8/262 (3%)

Query  12   PNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVA  71
            PN P+ALV +E+RHP T+    SA   LK  L    PI  Q +     +    G  T  +
Sbjct  69   PNDPLALVLIELRHPRTEPPVPSAISILKEELARWTPILEQEEVRQVNLET--GEHTAHS  126

Query  72   DRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGL  131
             +  + V RD  TA + +  A+ +E T Y  +E F  +V  +V AR  V+ + G  RIGL
Sbjct  127  QK--KLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIVHAMVTARQDVAPVDGCIRIGL  184

Query  132  RFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRE-LQPGKSLIV  190
            R++ EIR  A +     W+ W+ E LLGP        + T  Q   +  E  +PG SL +
Sbjct  185  RYINEIR--ASLAEPSGWAYWVAESLLGPGTQLADLKLTTTAQRHVIQCEGPEPGDSLTL  242

Query  191  RYGPGMGQALDPNYHLRRIT-PAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTFQDLY  249
            RY    G  +     L+R+  P   G FFL+DIDS W+     IP  +   +    + L+
Sbjct  243  RYAGARGAVIQSTPFLQRLKEPPAEGDFFLIDIDSAWSDPCKGIPALDAHLVDEVAERLH  302

Query  250  GPAQVVFQEMITSRLKDELLRQ  271
             P   +F+ +ITS L+ ++L+Q
Sbjct  303  TPIGPLFESLITSELRTKVLQQ  324


>gi|323721256|gb|EGB30314.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
 gi|339293402|gb|AEJ45513.1| hypothetical protein CCDC5079_0323 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339297047|gb|AEJ49157.1| hypothetical protein CCDC5180_0320 [Mycobacterium tuberculosis 
CCDC5180]
Length=267

 Score =  120 bits (302),  Expect = 2e-25, Method: Compositional matrix adjust.
 Identities = 87/262 (34%), Positives = 130/262 (50%), Gaps = 8/262 (3%)

Query  12   PNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVA  71
            PN P+ALV +E+RHP T+    SA   LK  L    PI  Q +     +    G  T  +
Sbjct  8    PNDPLALVLIELRHPRTEPPVPSAISILKEELARWTPILEQEEVRQVNLET--GEHTAHS  65

Query  72   DRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGL  131
             +  + V RD  TA + +  A+ +E T Y  +E F  +V  +V AR  V+ + G  RIGL
Sbjct  66   QK--KLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIVHAMVTARQDVAPVDGCIRIGL  123

Query  132  RFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRE-LQPGKSLIV  190
            R++ EIR  A +     W+ W+ E LLGP        + T  Q   +  E  +PG SL +
Sbjct  124  RYINEIR--ASLAEPSGWAYWVAESLLGPGTQLADLKLTTTAQRHVIQCEGPEPGDSLTL  181

Query  191  RYGPGMGQALDPNYHLRRIT-PAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTFQDLY  249
            RY    G  +     L+R+  P   G FFL+DIDS W+     IP  +   +    + L+
Sbjct  182  RYAGARGAVIQSTPFLQRLKEPPAEGDFFLIDIDSAWSDPCKGIPALDAHLVDEVAERLH  241

Query  250  GPAQVVFQEMITSRLKDELLRQ  271
             P   +F+ +ITS L+ ++L+Q
Sbjct  242  TPIGPLFESLITSELRTKVLQQ  263


>gi|240171632|ref|ZP_04750291.1| hypothetical protein MkanA1_20118 [Mycobacterium kansasii ATCC 
12478]
Length=271

 Score =  100 bits (249),  Expect = 3e-19, Method: Compositional matrix adjust.
 Identities = 74/263 (29%), Positives = 120/263 (46%), Gaps = 9/263 (3%)

Query  9    EVQPNAPVALVTVEIRHPTTDSLTESANRELKHLLIND-LPIERQAQDVSW--GMTAPGG  65
            EV P AP+ALVT EIR   +  L +    +   + + D  P+      V++  G   PG 
Sbjct  6    EVFPKAPLALVTTEIRFTDSPRLRQQETLDAVAIALEDRFPLNTPQTSVTFNVGSLGPGV  65

Query  66   APTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVG  125
             P    +R V   N   T + ++   + + ETTAYR F+ F   V  V +A    +    
Sbjct  66   LPQVEQERRVVLTNTTRTESVTITPSSFICETTAYREFDDFRVGVTAVCEALIDANVRPA  125

Query  126  LERIGLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQPG  185
            L R+GLR++ E+RVP  +     W+ WID+ ++ P    P  + +   QG   + +L  G
Sbjct  126  LVRVGLRYIDEVRVPEPITDVRAWAKWIDDGIIRPLTIGPDDVAVRNVQGLVTF-DLGDG  184

Query  186  KSLIVRYGPGMGQA--LDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVS  243
            K L  +Y   + Q   + P +  R     + GPFF+LD D F       +   + D + +
Sbjct  185  KGLNFQYA-ALNQTPVVQPQFLNR--GQFEPGPFFVLDFDGFRDFGEQDVVRLDADEVTN  241

Query  244  TFQDLYGPAQVVFQEMITSRLKD  266
                ++ P   +FQ  IT   ++
Sbjct  242  VLTAVHDPTGAMFQRAITEDARN  264


>gi|289568258|ref|ZP_06448485.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T17]
 gi|289542011|gb|EFD45660.1| LOW QUALITY PROTEIN: conserved membrane protein [Mycobacterium 
tuberculosis T17]
Length=211

 Score = 77.8 bits (190),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 54/149 (37%), Positives = 77/149 (52%), Gaps = 6/149 (4%)

Query  12   PNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVA  71
            PN P+ALV +E+RHP T+    SA   LK  L    PI  Q +     +    G  T  +
Sbjct  69   PNDPLALVLIELRHPRTEPPVPSAISILKEELARWTPILEQEEVRQVNLET--GEHTAHS  126

Query  72   DRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGL  131
             +  + V RD  TA + +  A+ +E T Y  +E F  +V  +V AR  V+ + G  RIGL
Sbjct  127  QK--KLVARDRRTAITFRPDAMTLEVTDYPGWEEFRSIVHAMVTARQDVAPVDGCIRIGL  184

Query  132  RFVLEIRVPAGVDGRITWSNWIDEQLLGP  160
            R++ EIR  A +     W+ W+ E LLGP
Sbjct  185  RYINEIR--ASLAEPSGWAYWVAESLLGP  211


>gi|336120556|ref|YP_004575342.1| hypothetical protein MLP_49250 [Microlunatus phosphovorus NM-1]
 gi|334688354|dbj|BAK37939.1| hypothetical protein MLP_49250 [Microlunatus phosphovorus NM-1]
Length=284

 Score = 66.6 bits (161),  Expect = 4e-09, Method: Compositional matrix adjust.
 Identities = 61/260 (24%), Positives = 109/260 (42%), Gaps = 11/260 (4%)

Query  15   PVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVADRF  74
            P+    +EIR P    L++    EL    + +LP+ R A+     +   G     + D +
Sbjct  17   PLVYAVIEIRVPFAPRLSKGETAELLQEALAELPVLR-AEKRQRLVPKDGNIQVEIEDGW  75

Query  75   VRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGLRFV  134
             R+++  N+ +  + N +IV ETT Y  FE F    +  +   ++ +   G ER+GLR++
Sbjct  76   -RFLDLANSRSLVVTNTSIVYETTRYPGFETFLGEFIACLHLISEHARPAGYERLGLRYI  134

Query  135  LEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQ--------PGK  186
             E+     V     W  WI  +L+     + G +           R+L+           
Sbjct  135  NEVWPTRPVQSFDDWKQWIAPELVTTLVRSEGEVHRNVDGDRPQLRDLEVHLQFSLADNC  194

Query  187  SLIVRYGPGMGQALDPNYHLRR-ITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTF  245
            +L  R     G  +  N  L+R +TPA  G F ++D D FW     SI  ++ + +    
Sbjct  195  ALTTRVATQTGLGVVGNDPLKRWVTPAAAGNFCVIDFDGFWPRIPDSIQPFDIEKISRQL  254

Query  246  QDLYGPAQVVFQEMITSRLK  265
            + ++ P +  F    T   +
Sbjct  255  KAVHNPVKGGFGWATTHEFR  274


>gi|220915153|ref|YP_002490457.1| hypothetical protein A2cp1_0030 [Anaeromyxobacter dehalogenans 
2CP-1]
 gi|219953007|gb|ACL63391.1| hypothetical protein A2cp1_0030 [Anaeromyxobacter dehalogenans 
2CP-1]
Length=263

 Score = 57.0 bits (136),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 56/215 (27%), Positives = 99/215 (47%), Gaps = 10/215 (4%)

Query  13   NAPVALVTVEIRHPTTDSLTESA-NRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVA  71
             +P+ LV  +IR P    L ++A     +  L +D P+  + Q V++ +T  GG     +
Sbjct  14   KSPLRLVVGQIRFPLQLRLADTAFTAPFQDALADDYPVAAREQQVAFQVTPKGGLQAAPS  73

Query  72   DRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGL  131
            +  +R+ +R+   A  L   A+ +E   Y + E F+    +V+ A  +   +    R+GL
Sbjct  74   ETLLRFASRNGDWAVVLGESALTLEVRGYSAVEEFSSRFEKVLGAAKERLRLRERSRLGL  133

Query  132  RFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLV-LTEWQGAAVYRELQPGKSLIV  190
            R++ E R  AG      W+  ++ +LLG   F    L+  T    A   R  +    L +
Sbjct  134  RYINEFRHDAG-RSLADWAKLMNPELLG---FAGNNLLGGTVEHMAHEVRVRRDDGVLAI  189

Query  191  RYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSF  225
            R+G  +G  ++P        P   G F+LLD+D +
Sbjct  190  RHGLLVGGVVEPI----PTAPVAEGRFYLLDMDYY  220


>gi|269957820|ref|YP_003327609.1| hypothetical protein Xcel_3046 [Xylanimonas cellulosilytica DSM 
15894]
 gi|269306501|gb|ACZ32051.1| hypothetical protein Xcel_3046 [Xylanimonas cellulosilytica DSM 
15894]
Length=270

 Score = 47.8 bits (112),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 59/262 (23%), Positives = 115/262 (44%), Gaps = 23/262 (8%)

Query  13   NAPVALVTVEIRHPTTDSLTESANRELKHL--LINDLPIERQAQDVSWGMTAPGGAPTPV  70
            NAP+ALV  +IR P    L        +    ++++ P+     +V++ +T  G    P 
Sbjct  22   NAPLALVLCQIRWPEFQHLRGDLGETAQAFGSVLDEYPVISNLHEVAYTITPEGVTQQP-  80

Query  71   ADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIG  130
             ++  ++ + D     SL  + + +  T Y SF  F + +  V++A      +  +ER+G
Sbjct  81   GEKIFQWHSIDGVWHISLSRRFVTLYCTTYTSFPDFLERLESVLEAVETQVKVPLVERVG  140

Query  131  LRFVLEIRVPAGVDGRI--TWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQPGKSL  188
            +R+V ++      D R+      ++  ++LG          +     A   R +    +L
Sbjct  141  VRYVNQV-----TDSRLVENLGEYVRPEVLGYSGLAGVSDYVRLASSANQARYVVDDAAL  195

Query  189  IVRYG--PGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDALVSTFQ  246
             VR G  P  G+ +DP      ++PAQ  P ++LD+D+    S   +  ++  +++ST  
Sbjct  196  QVRSGIVPA-GETVDPA-----VSPAQV-PSWVLDLDA----SSERVAPFDASSVLSTAG  244

Query  247  DLYGPAQVVFQEMITSRLKDEL  268
             L   A   F+++ T     E 
Sbjct  245  RLSDFAYDFFKQVSTEGFLKEF  266


>gi|167566722|ref|ZP_02359638.1| hypothetical protein BoklE_29451 [Burkholderia oklahomensis EO147]
Length=255

 Score = 45.1 bits (105),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 58/128 (46%), Gaps = 4/128 (3%)

Query  36   NRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVADRFVRYVNRDNTTAASLKNQAIVV  95
            N  + H  I + P +  + +VS+     G     +  +   +   D +    L  QA+ +
Sbjct  38   NAIVHHFAIVEPPADMLSHEVSFDNA--GVRTKQITSKQRSFFAIDRSRQLVLAAQAMFI  95

Query  96   ETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGLRFVLEIRVPAGVDGRITWSNWIDE  155
              T+Y ++E      +  +DA +       + R GLR++ EI VP  +D    W  +ID+
Sbjct  96   NYTSYSTYEETKAQFVAAIDAISASFPEAKVARFGLRYINEITVP--LDDPTQWETYIDD  153

Query  156  QLLGPQRF  163
            +LLG + F
Sbjct  154  RLLGSRSF  161


>gi|337767922|emb|CCB76635.1| conserved protein of unknown function [Streptomyces cattleya 
NRRL 8057]
Length=275

 Score = 43.5 bits (101),  Expect = 0.034, Method: Compositional matrix adjust.
 Identities = 52/216 (25%), Positives = 87/216 (41%), Gaps = 11/216 (5%)

Query  12   PNAPVALVTVEIRHPTTDSLTES--ANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTP  69
            P+AP+  V  ++R  T   L     A +     L  D P   Q  + +   T        
Sbjct  21   PDAPLVRVIGQLRFGTLSVLASGNDAAQAFMKELSGDYPFVEQGFEQTMLFTPGQPMKQA  80

Query  70   VADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERI  129
             A    R  + D ++  +L N A+ +ETTAY+    F   + R+      V+ +    RI
Sbjct  81   EAGSIWRLRSADQSSVVALTNGALTLETTAYQGRTEFCRELTRLGSLLESVTRLPSFSRI  140

Query  130  GLRFVLEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRELQPGKSLI  189
             +R+   +    G     + S+ +  +L+G      GG     +  +     L  GK L+
Sbjct  141  AVRYTNRL---VGETTLSSLSSLVHPELVGLVGAPLGGGAQLTFALSQALLALNDGK-LL  196

Query  190  VRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSF  225
            V++G      L  N  +    PA   P +LLD+DS+
Sbjct  197  VQFG-----RLPENGTIDPTLPAVAEPSWLLDLDSY  227


>gi|30250464|ref|NP_842534.1| hypothetical protein NE2545 [Nitrosomonas europaea ATCC 19718]
 gi|30139305|emb|CAD86457.1| hypothetical protein NE2545 [Nitrosomonas europaea ATCC 19718]
Length=267

 Score = 43.5 bits (101),  Expect = 0.035, Method: Compositional matrix adjust.
 Identities = 38/140 (28%), Positives = 63/140 (45%), Gaps = 8/140 (5%)

Query  13   NAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAP--GGAPT--  68
            NAPV     ++RH     L   A      +     P  ++   +++ + AP  G AP   
Sbjct  7    NAPVYFTIAQVRHNPVLRLGSYAPDIQDRMRKAGYPDFKKGIAMAFTL-APQLGDAPQTQ  65

Query  69   -PVADRFVR--YVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVG  125
             PV ++  R  + + D+T    ++  A+   TT Y +FEA  D  MR +    +  ++  
Sbjct  66   PPVVEQVERLMFFSTDSTRGFIVEQNALSFHTTEYETFEALADEFMRGLAIVHECVTLAH  125

Query  126  LERIGLRFVLEIRVPAGVDG  145
             ERIGLR++  +  P G  G
Sbjct  126  SERIGLRYLDAVVPPGGETG  145


>gi|300865780|ref|ZP_07110535.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300336221|emb|CBN55688.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
Length=266

 Score = 42.7 bits (99),  Expect = 0.057, Method: Compositional matrix adjust.
 Identities = 41/209 (20%), Positives = 87/209 (42%), Gaps = 16/209 (7%)

Query  10   VQPNAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSW-----GMTAPG  64
            +  + P+  V  ++R PT   +      E +  +  D PI +Q+Q +        +    
Sbjct  10   IYKHTPLIEVVGQLRFPTILKINNQEPFEFQERIRFDYPIYKQSQSMDIPPEIASLVPQI  69

Query  65   GAPTPVADRFVRY--VNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSS  122
            G+      ++  Y  ++ ++    SL    + + T  Y+ +E F +  +++++   ++ +
Sbjct  70   GSLVSQVSQYTTYNFISENSKWQLSLNRDNLTLSTVEYKRYEDFKEKFIKIINVFEEIYN  129

Query  123  IVGLERIGLRFV-LEIRVPAGVDGRITWSNWIDEQLLGPQRFTP-GGLVLTEWQGAAVYR  180
                 R+GLR+  L +R    ++    WS  I  Q+      +   G + T  +   +  
Sbjct  130  PSFYVRLGLRYKDLILRSKLKMEEDKPWSALISPQIASELHSSELSGSIRTLVKNLEI--  187

Query  181  ELQPGK-----SLIVRYGPGMGQALDPNY  204
            EL+ GK      L++  GP  G   +P Y
Sbjct  188  ELEVGKVNFNHGLVISQGPSQGNIQEPGY  216


>gi|344342584|ref|ZP_08773455.1| hypothetical protein MarpuDRAFT_0268 [Marichromatium purpuratum 
984]
 gi|343805920|gb|EGV23815.1| hypothetical protein MarpuDRAFT_0268 [Marichromatium purpuratum 
984]
Length=262

 Score = 40.4 bits (93),  Expect = 0.28, Method: Compositional matrix adjust.
 Identities = 52/206 (26%), Positives = 82/206 (40%), Gaps = 37/206 (17%)

Query  79   NRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGLRFV----  134
            N+D T    L   +I  +TT Y + E F   ++R + A  +  S+  + R+GLR++    
Sbjct  73   NQDRTAGFVLLPSSITFQTTNYDTHETFIPELLRGLSAVHEEVSLDHVGRLGLRYLDAVL  132

Query  135  ------LEIRVPAGVDG-------RITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVYRE  181
                  +E     GV G       +   S  +    +GP   T G LV+       VYR 
Sbjct  133  PRSGEQVEQYFADGVHGVKFDAPCQHAMSESVFSTKVGP-LVTSGTLVVR------VYRA  185

Query  182  LQPGKSLIVRYGPGMGQ-ALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGSIPEYNRDA  240
              P     + + P + Q  L PN       P   G   +LD D F +   G +P  N D 
Sbjct  186  NAP-----LGFPPDLSQNGLTPNARFAMTEPCDHG---VLDTDHFCS---GRMP-INPDE  233

Query  241  LVSTFQDLYGPAQVVFQEMITSRLKD  266
            L +    L+   + VF +  T   ++
Sbjct  234  LEAQLHSLHASVKSVFMKATTDHARE  259


>gi|240171062|ref|ZP_04749721.1| hypothetical protein MkanA1_17254 [Mycobacterium kansasii ATCC 
12478]
Length=271

 Score = 40.0 bits (92),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 60/233 (26%), Positives = 91/233 (40%), Gaps = 32/233 (13%)

Query  13   NAPVALVTVEIRHP--TTDSLTESA-NRELKHLLINDLPIERQAQDVSWGMTAPGGAPTP  69
            +AP+     +IR P  T  S  E A    +   L +  P+    Q+ +  +T  G +  P
Sbjct  21   SAPLVRAIAQIRFPHLTRFSTNEDAVATRIADALADQYPLMDVGQETTLIITPDGLSEDP  80

Query  70   VADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVG---L  126
               R  R  + D     +     + V+TT Y       D   R+VDA   V+  V    +
Sbjct  81   TTTRLWRLSSGDRDWQITFCGTFLSVDTTHYVRLR---DFAQRLVDAWKAVNEQVTVPYI  137

Query  127  ERIGLRFV-------LEIRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVY  179
            +R+G+R+V       L  R+P            +  ++LG          L      A Y
Sbjct  138  DRLGVRYVNQLTRRDLLTRLP----------ELLRTEVLGISVSQGEEFALLSNITEARY  187

Query  180  RELQPGKSLIVRYGPGMGQALDPNYHLRRITPAQTGPFFLLDIDSFWTPSGGS  232
            R L  G S + R+G      L  N  +    PA   P +LLD+DSF   + GS
Sbjct  188  R-LSDGASFMARWG-----MLPANTSIDNAVPAYDYPTWLLDMDSFREFTPGS  234


>gi|222112336|ref|YP_002554600.1| hypothetical protein Dtpsy_3168 [Acidovorax ebreus TPSY]
 gi|221731780|gb|ACM34600.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length=261

 Score = 39.3 bits (90),  Expect = 0.60, Method: Compositional matrix adjust.
 Identities = 23/82 (29%), Positives = 39/82 (48%), Gaps = 3/82 (3%)

Query  56   VSWGMTAPGG---APTPVADRFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMR  112
            +S  +TA  G    PTPV      + N +NT    L  Q++ +++T Y  FE F+   + 
Sbjct  50   ISIQLTAQEGQPPTPTPVQQERFLFGNVENTHTFILDGQSLTLQSTNYGQFETFSACFLD  109

Query  113  VVDARAQVSSIVGLERIGLRFV  134
             +        +   ER+GLR++
Sbjct  110  GLSIVNDAVKLAFTERVGLRYL  131


>gi|111023445|ref|YP_706417.1| dihydroxy-acid dehydratase [Rhodococcus jostii RHA1]
 gi|110822975|gb|ABG98259.1| dihydroxy-acid dehydratase [Rhodococcus jostii RHA1]
Length=614

 Score = 37.7 bits (86),  Expect = 1.7, Method: Compositional matrix adjust.
 Identities = 26/78 (34%), Positives = 41/78 (53%), Gaps = 9/78 (11%)

Query  137  IRVPAGVDGRITWSNWIDEQLLGPQRFTPGGLVLTEWQGAAVY--RELQPGKSLIVRY--  192
            +R    VDG +  +  IDE L   Q   P  +V ++ +  +V   +++QPG+ L+VRY  
Sbjct  428  LRGNIAVDGAVIKTAGIDEDLFHFQ--GPARVVESQEEAVSVILGKKIQPGEVLVVRYEG  485

Query  193  ---GPGMGQALDPNYHLR  207
               GPGM + L P   L+
Sbjct  486  PAGGPGMQEMLHPTAFLK  503


>gi|154495777|ref|ZP_02034473.1| hypothetical protein BACCAP_00056 [Bacteroides capillosus ATCC 
29799]
 gi|150274975|gb|EDN02023.1| hypothetical protein BACCAP_00056 [Bacteroides capillosus ATCC 
29799]
Length=262

 Score = 37.0 bits (84),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 38/151 (26%), Positives = 65/151 (44%), Gaps = 6/151 (3%)

Query  14   APVALVTVEIRHPTTDSLTESANRELKHLLINDLP-IERQAQDVSWGMTAPGGAPTPVA-  71
            +P+  V  ++R P   S+  +   + +  +  + P   +  +  +  MT   GAP  V  
Sbjct  14   SPLVEVICQLRFPAILSIGANDPVDFQEAIRQEFPRFNKVKERPAPKMTMVDGAPKMVQP  73

Query  72   DRFVRY--VNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERI  129
            D    Y  V+ D     +L    I + T  Y+ +E F   + R +    Q+ +    ER+
Sbjct  74   DPITNYTFVSEDGLWKLNLTQNFIALSTLRYQRWEDFAQRLDRPLAQFIQIYNPTFFERV  133

Query  130  GLRFVLEI-RVPAGVDGRITWSNWIDEQLLG  159
            GLR+V    R   G++G   WS+ I    LG
Sbjct  134  GLRYVNAFSRRFLGLEG-TPWSDLIQPAFLG  163


>gi|300113075|ref|YP_003759650.1| hypothetical protein Nwat_0359 [Nitrosococcus watsonii C-113]
 gi|299539012|gb|ADJ27329.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length=259

 Score = 36.6 bits (83),  Expect = 4.5, Method: Compositional matrix adjust.
 Identities = 29/130 (23%), Positives = 53/130 (41%), Gaps = 3/130 (2%)

Query  13   NAPVALVTVEIRHPTTDSLTESANRELKHLLINDLPIERQAQDVSWGMTAPGGAPTPVAD  72
            N P+  V  E R      + E   + ++  L    PIE+  Q        PGG      +
Sbjct  9    NQPLKFVLAEFRFSPVMQIAEYIPK-IQEALRKQYPIEK-TQSEQTVQVQPGGIAVSTVN  66

Query  73   RFVRYVNRDNTTAASLKNQAIVVETTAYRSFEAFTDVVMRVVDARAQVSSIVGLERIGLR  132
            R+  +++ D  +A  +  + +V  T  Y  F+ F+    + ++    +     + RIGLR
Sbjct  67   RWA-FISADKKSAIEINQERLVYITAEYPRFDGFSAACKQAIETLVDIVEPSLILRIGLR  125

Query  133  FVLEIRVPAG  142
            +   I +  G
Sbjct  126  YSDLITIDDG  135


>gi|87306732|ref|ZP_01088879.1| hypothetical protein DSM3645_10372 [Blastopirellula marina DSM 
3645]
 gi|87290911|gb|EAQ82798.1| hypothetical protein DSM3645_10372 [Blastopirellula marina DSM 
3645]
Length=289

 Score = 36.2 bits (82),  Expect = 5.4, Method: Compositional matrix adjust.
 Identities = 26/92 (29%), Positives = 43/92 (47%), Gaps = 9/92 (9%)

Query  49   IERQAQDVSWGMTAPGGAPTPVADRFVRYV--NRDNTTAASLKNQAIVVETTAYRSFEAF  106
            +E Q Q ++ G+        P+A+  VR++   R    A  L    +  E ++Y +FE F
Sbjct  77   VEEQMQQLTLGVM-------PIAESDVRWIFGGRKRREAIILTKDFVTYEVSSYTNFEEF  129

Query  107  TDVVMRVVDARAQVSSIVGLERIGLRFVLEIR  138
                   +D  A  ++I    +IGLR+V  IR
Sbjct  130  VARFSAALDVIANYANITEAVQIGLRYVNVIR  161



Lambda     K      H
   0.319    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 419877318148




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40