BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0833
Length=749
Score E
Sequences producing significant alignments: (Bits) Value
gi|57116788|ref|YP_177760.1| PE-PGRS family protein [Mycobacteri... 1083 0.0
gi|148660610|ref|YP_001282133.1| PE-PGRS family protein [Mycobac... 1081 0.0
gi|15840245|ref|NP_335282.1| PE_PGRS family protein [Mycobacteri... 1079 0.0
gi|339297488|gb|AEJ49598.1| hypothetical protein CCDC5180_0761 [... 1073 0.0
gi|339293848|gb|AEJ45959.1| hypothetical protein CCDC5079_0769 [... 1052 0.0
gi|340625847|ref|YP_004744299.1| PE-PGRS family protein [Mycobac... 89.4 2e-15
gi|339630898|ref|YP_004722540.1| PE-PGRS family protein [Mycobac... 89.4 2e-15
gi|121636756|ref|YP_976979.1| PE-PGRS family protein [Mycobacter... 89.4 2e-15
gi|344218658|gb|AEM99288.1| PE-PGRS family protein [Mycobacteriu... 88.2 5e-15
gi|148822039|ref|YP_001286793.1| PE-PGRS family protein [Mycobac... 88.2 5e-15
gi|31792021|ref|NP_854514.1| PE-PGRS family protein [Mycobacteri... 88.2 5e-15
gi|297730330|ref|ZP_06959448.1| PE-PGRS family protein [Mycobact... 87.4 9e-15
gi|297633345|ref|ZP_06951125.1| PE-PGRS family protein [Mycobact... 87.4 9e-15
gi|254549806|ref|ZP_05140253.1| PE-PGRS family protein [Mycobact... 87.0 1e-14
gi|339630353|ref|YP_004721995.1| hypothetical protein MAF_02800 ... 72.0 3e-10
gi|118617969|ref|YP_906301.1| PE-PGRS family protein [Mycobacter... 68.9 3e-09
gi|183981414|ref|YP_001849705.1| PE-PGRS family protein, PE_PGRS... 68.6 4e-09
gi|339293771|gb|AEJ45882.1| PE-PGRS family protein [Mycobacteriu... 67.0 1e-08
gi|57116774|ref|YP_177751.1| PE-PGRS family protein [Mycobacteri... 67.0 1e-08
gi|148660522|ref|YP_001282045.1| PE-PGRS family protein [Mycobac... 67.0 1e-08
gi|148821952|ref|YP_001286706.1| PE-PGRS family protein [Mycobac... 67.0 1e-08
gi|15840160|ref|NP_335197.1| PE_PGRS family protein [Mycobacteri... 65.5 4e-08
gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobac... 62.0 3e-07
gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS... 60.8 8e-07
gi|121637668|ref|YP_977891.1| PE-PGRS family protein wag22b [Myc... 55.1 4e-05
gi|121636668|ref|YP_976891.1| PE-PGRS family protein [Mycobacter... 55.1 4e-05
gi|224990143|ref|YP_002644830.1| PE-PGRS family protein [Mycobac... 55.1 4e-05
gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobac... 53.9 1e-04
gi|339630814|ref|YP_004722456.1| PE-PGRS family protein [Mycobac... 53.1 2e-04
gi|31791932|ref|NP_854425.1| PE-PGRS family protein [Mycobacteri... 52.8 3e-04
gi|148660521|ref|YP_001282044.1| PE-PGRS family protein [Mycobac... 52.8 3e-04
gi|15840158|ref|NP_335195.1| PE_PGRS family protein [Mycobacteri... 52.8 3e-04
gi|57116773|ref|YP_177750.1| PE-PGRS family protein [Mycobacteri... 52.8 3e-04
gi|339293770|gb|AEJ45881.1| PE-PGRS family protein [Mycobacteriu... 52.4 3e-04
gi|294996232|ref|ZP_06801923.1| PE-PGRS family protein [Mycobact... 52.4 3e-04
gi|31792948|ref|NP_855441.1| hypothetical protein Mb1789c [Mycob... 52.0 4e-04
gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS... 48.9 0.003
gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobac... 47.0 0.013
gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 46.6 0.016
gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacter... 46.6 0.019
gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobac... 46.2 0.020
gi|183980217|ref|YP_001848508.1| PE-PGRS family protein [Mycobac... 45.1 0.046
gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 43.9 0.12
gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacter... 43.9 0.12
gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycob... 43.9 0.12
gi|183981863|ref|YP_001850154.1| PE-PGRS family protein [Mycobac... 43.5 0.13
gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobac... 43.1 0.17
gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacter... 43.1 0.18
gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacteri... 43.1 0.20
gi|183981217|ref|YP_001849508.1| PE-PGRS family protein, PE_PGRS... 42.0 0.40
>gi|57116788|ref|YP_177760.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441230|pir||A70812 hypothetical glycine-rich protein Rv0833 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490240|emb|CAE55328.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=749
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 748/749 (99%), Positives = 749/749 (100%), Gaps = 0/749 (0%)
Query 1 LIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
+IGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG
Sbjct 1 MIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
Query 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG
Sbjct 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
Query 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG
Sbjct 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
Query 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG
Sbjct 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
Query 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI
Sbjct 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
Query 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL
Sbjct 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
Query 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF
Sbjct 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
Query 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG
Sbjct 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
Query 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG
Sbjct 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
Query 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG
Sbjct 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
Query 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG
Sbjct 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
Query 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG
Sbjct 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
Query 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sbjct 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
>gi|148660610|ref|YP_001282133.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253797780|ref|YP_003030781.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|148504762|gb|ABQ72571.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|253319283|gb|ACT23886.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457559|gb|AEB02982.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=749
Score = 1081 bits (2795), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/749 (99%), Positives = 748/749 (99%), Gaps = 0/749 (0%)
Query 1 LIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
+IGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG
Sbjct 1 MIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
Query 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG
Sbjct 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
Query 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG
Sbjct 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
Query 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG
Sbjct 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
Query 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI
Sbjct 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
Query 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL
Sbjct 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
Query 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF
Sbjct 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
Query 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG
Sbjct 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
Query 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG
Sbjct 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
Query 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGD GAGGNAGLLAPGLAGG
Sbjct 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGG 600
Query 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG
Sbjct 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
Query 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG
Sbjct 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
Query 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sbjct 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
>gi|15840245|ref|NP_335282.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880403|gb|AAK45096.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=749
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 746/749 (99%), Positives = 747/749 (99%), Gaps = 0/749 (0%)
Query 1 LIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
+IGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG
Sbjct 1 MIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
Query 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG
Sbjct 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
Query 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG
Sbjct 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
Query 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG
Sbjct 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
Query 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI
Sbjct 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
Query 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL
Sbjct 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
Query 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF
Sbjct 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
Query 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG
Sbjct 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
Query 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGA GAGGSGVSGGAGGEGGAGGAGGLFAG
Sbjct 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAAGAGGSGVSGGAGGEGGAGGAGGLFAG 540
Query 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGD GAGGNAGLLAPGLAGG
Sbjct 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGG 600
Query 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG
Sbjct 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
Query 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG
Sbjct 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
Query 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sbjct 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
>gi|339297488|gb|AEJ49598.1| hypothetical protein CCDC5180_0761 [Mycobacterium tuberculosis
CCDC5180]
Length=749
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 742/749 (99%), Positives = 743/749 (99%), Gaps = 0/749 (0%)
Query 1 LIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
+IGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG
Sbjct 1 MIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
Query 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
GAGGAGGS GSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG
Sbjct 61 GAGGAGGSDGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
Query 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG
Sbjct 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
Query 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
LGGQGNHTG HGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG
Sbjct 181 LGGQGNHTGRHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
Query 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI
Sbjct 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
Query 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL
Sbjct 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
Query 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
LGLDGANAPASTNPLHTAQQQALAAVNAPIQA TGRPLIGNGANGAPGSGAPGGHGGWLF
Sbjct 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAATGRPLIGNGANGAPGSGAPGGHGGWLF 420
Query 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG
Sbjct 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
Query 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFA
Sbjct 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAD 540
Query 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
GGAGGAGGS NNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGD GAGGNAGLLAPGLAGG
Sbjct 541 GGAGGAGGSSNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDGGAGGNAGLLAPGLAGG 600
Query 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG
Sbjct 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
Query 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG
Sbjct 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
Query 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sbjct 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
>gi|339293848|gb|AEJ45959.1| hypothetical protein CCDC5079_0769 [Mycobacterium tuberculosis
CCDC5079]
Length=749
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/749 (99%), Positives = 742/749 (99%), Gaps = 0/749 (0%)
Query 1 LIGNGGAGGSGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
+IGNGGAGG+GAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG
Sbjct 1 MIGNGGAGGAGAPGAIGGAGGPAGLIGVGGAGGAGGDSAVAGVIGGAGGAGGAALLFGAG 60
Query 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG
Sbjct 61 GAGGAGGSGGSGAAGGAGGAGGAGGLFASGGSGGFGGFASTGTGGAGGTGGAGGLFASGG 120
Query 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGSGGTGGAGGTGGAGGLFGAGGAGG 180
VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGG+GGTGGAGGTGGAGGL GAGGAGG
Sbjct 121 VGGTGGGAGSGGTGGVGGTGGAGGLFASGGAGGAGGAGGTGGAGGTGGAGGLCGAGGAGG 180
Query 181 LGGQGNHTGGHGGAGGSAGLLALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
LGG+GN TGGHGGAGGSAG +ALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG
Sbjct 181 LGGRGNDTGGHGGAGGSAGRVALGDGGAGGAGGAATTGTGGAGGAGGKAGLLFGSGGAGG 240
Query 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI
Sbjct 241 SGGAAGTFGDTGNSGGAGGAGGKAGLLFGSGGAGGSGGAGGFANGSTGGAGGAGGGAGLI 300
Query 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL
Sbjct 301 GNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVGGIGGLL 360
Query 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF
Sbjct 361 LGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLF 420
Query 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG
Sbjct 421 GGGGTGGSGVSGGAGGDGGAGGILFGAGGAGGAGGAVTGTGATGGSGGAGGGALLFGAGG 480
Query 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG
Sbjct 481 AGGAGGSSGIGGFAAGGAGGPGGAGGLFNGGGAGGAGGSGVSGGAGGEGGAGGAGGLFAG 540
Query 541 GGAGGAGGSGNNVGGAGGAGGVGGLFGAGGAGGSGGGGSVAGDSGAGGNAGLLAPGLAGG 600
GGAGGAGG+G +VGGAGGAGG GGLFGAGGAGGSGGGG VAGD GAGGNAGLLAPGLAGG
Sbjct 541 GGAGGAGGAGGHVGGAGGAGGGGGLFGAGGAGGSGGGGGVAGDGGAGGNAGLLAPGLAGG 600
Query 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG
Sbjct 601 AGGGGGQGFDTGGAGGPGGDAGLLVGSGGVGGAGGFGLTTGGPGAAGGDAGLLFGSGGAG 660
Query 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG
Sbjct 661 GAGGSGRTDLGGAGGAGGKAGLIGNGGNGGAGGAGGNGGGDGGPGGAAFGLGNGGNGGNG 720
Query 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
GTGTSAGSPGAGGAGGSLIGAEGLPGLLP
Sbjct 721 GTGTSAGSPGAGGAGGSLIGAEGLPGLLP 749
>gi|340625847|ref|YP_004744299.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340004037|emb|CCC43173.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=914
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 503 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 541
>gi|339630898|ref|YP_004722540.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330254|emb|CCC25914.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=907
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 503 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 541
>gi|121636756|ref|YP_976979.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989227|ref|YP_002643914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121492403|emb|CAL70871.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772340|dbj|BAH25146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600772|emb|CCC63443.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=910
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 503 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 541
>gi|344218658|gb|AEM99288.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=706
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
>gi|148822039|ref|YP_001286793.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720566|gb|ABR05191.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=734
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
>gi|31792021|ref|NP_854514.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617608|emb|CAD93718.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=773
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
>gi|297730330|ref|ZP_06959448.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506]
Length=396
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 313 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 351
>gi|297633345|ref|ZP_06951125.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
Length=453
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
>gi|254549806|ref|ZP_05140253.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length=389
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/39 (100%), Positives = 39/39 (100%), Gaps = 0/39 (0%)
Query 366 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 404
ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN
Sbjct 239 ANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGAN 277
>gi|339630353|ref|YP_004721995.1| hypothetical protein MAF_02800 [Mycobacterium africanum GM041182]
gi|339329709|emb|CCC25352.1| unnamed protein product [Mycobacterium africanum GM041182]
Length=614
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/41 (74%), Positives = 32/41 (79%), Gaps = 0/41 (0%)
Query 367 NAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
NAPAST+PLHT QQ L VN P Q +TGRPLIGNGANG P
Sbjct 209 NAPASTSPLHTLQQNVLNVVNEPFQTLTGRPLIGNGANGTP 249
>gi|118617969|ref|YP_906301.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570079|gb|ABL04830.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=724
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/35 (83%), Positives = 32/35 (92%), Gaps = 0/35 (0%)
Query 367 NAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGN 401
NAPAST+PLHT QQQAL AVNAP+Q +TGRPLIGN
Sbjct 469 NAPASTSPLHTFQQQALGAVNAPVQTLTGRPLIGN 503
>gi|183981414|ref|YP_001849705.1| PE-PGRS family protein, PE_PGRS9 [Mycobacterium marinum M]
gi|183174740|gb|ACC39850.1| PE-PGRS family protein, PE_PGRS9 [Mycobacterium marinum M]
Length=864
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/35 (83%), Positives = 32/35 (92%), Gaps = 0/35 (0%)
Query 367 NAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGN 401
NAPAST+PLHT QQQAL AVNAP+Q +TGRPLIGN
Sbjct 475 NAPASTSPLHTFQQQALGAVNAPVQTLTGRPLIGN 509
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (83%), Gaps = 0/28 (0%)
Query 380 QQALAAVNAPIQAVTGRPLIGNGANGAP 407
QQ L +NAP+ A TGRPLIGNGANGAP
Sbjct 99 QQLLTLINAPLLAATGRPLIGNGANGAP 126
>gi|339293771|gb|AEJ45882.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=798
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (78%), Gaps = 0/40 (0%)
Query 368 APASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
APAST+PLHT QQ + VN P Q +TGRPLIGNGANG P
Sbjct 374 APASTSPLHTLQQDVINMVNDPFQTLTGRPLIGNGANGTP 413
>gi|57116774|ref|YP_177751.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7388428|sp|O53810.1|PG10_MYCTU RecName: Full=Uncharacterized PE-PGRS family protein PE_PGRS10;
Flags: Precursor
gi|38490226|emb|CAE55317.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=801
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (78%), Gaps = 0/40 (0%)
Query 368 APASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
APAST+PLHT QQ + VN P Q +TGRPLIGNGANG P
Sbjct 377 APASTSPLHTLQQDVINMVNDPFQTLTGRPLIGNGANGTP 416
>gi|148660522|ref|YP_001282045.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148504674|gb|ABQ72483.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
Length=801
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (78%), Gaps = 0/40 (0%)
Query 368 APASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
APAST+PLHT QQ + VN P Q +TGRPLIGNGANG P
Sbjct 377 APASTSPLHTLQQDVINMVNDPFQTLTGRPLIGNGANGTP 416
>gi|148821952|ref|YP_001286706.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|148720479|gb|ABR05104.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
Length=801
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 31/40 (78%), Gaps = 0/40 (0%)
Query 368 APASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
APAST+PLHT QQ + VN P Q +TGRPLIGNGANG P
Sbjct 377 APASTSPLHTLQQDVINMVNDPFQTLTGRPLIGNGANGTP 416
>gi|15840160|ref|NP_335197.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880312|gb|AAK45011.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=785
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/39 (70%), Positives = 30/39 (77%), Gaps = 0/39 (0%)
Query 369 PASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
PAST+PLHT QQ + VN P Q +TGRPLIGNGANG P
Sbjct 378 PASTSPLHTLQQDVINMVNDPFQTLTGRPLIGNGANGTP 416
>gi|340628625|ref|YP_004747077.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
gi|340006815|emb|CCC46004.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059]
Length=901
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/53 (63%), Positives = 39/53 (74%), Gaps = 0/53 (0%)
Query 359 LLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
LLLG +G+N P +PL QQ L A+NAP QA+ GRPLIGNG NGAPG+GA
Sbjct 551 LLLGANGSNGPDPASPLPPVQQAVLDAINAPTQALVGRPLIGNGVNGAPGTGA 603
>gi|183985176|ref|YP_001853467.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
gi|183178502|gb|ACC43612.1| PE-PGRS family protein, PE_PGRS9_2 [Mycobacterium marinum M]
Length=846
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/44 (71%), Positives = 34/44 (78%), Gaps = 0/44 (0%)
Query 367 NAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSG 410
NAPAST+ LH QQQAL +N P QA+TGRPLIGNG GA GSG
Sbjct 455 NAPASTSALHNLQQQALGVINEPTQALTGRPLIGNGTPGAAGSG 498
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/40 (73%), Positives = 30/40 (75%), Gaps = 0/40 (0%)
Query 383 LAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGG 422
LAAVN PI A+TGRPLIGNGANG PG G G GGWL G
Sbjct 86 LAAVNEPIAALTGRPLIGNGANGTPGLGTDGAPGGWLIGN 125
>gi|121637668|ref|YP_977891.1| PE-PGRS family protein wag22b [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121493315|emb|CAL71786.1| PE-PGRS family protein wag22b [second part] [Mycobacterium bovis
BCG str. Pasteur 1173P2]
Length=802
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/90 (62%), Positives = 64/90 (72%), Gaps = 3/90 (3%)
Query 364 DGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGG 423
DG NAP ST+P H QQ L+ +N P +A+TGRPLIGNG +G PG+G GG GGWLFG G
Sbjct 402 DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG 461
Query 424 GTGGSGVSGGAGGDGGAGG---ILFGAGGA 450
G GG+G +G G GGAGG ILFG GGA
Sbjct 462 GNGGAGAAGTNGSAGGAGGAGGILFGTGGA 491
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/38 (72%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 382 ALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
L ++NAP+ A TGRPLIGNGANGAPG+GA GG GWL
Sbjct 4 LLNSINAPVLAATGRPLIGNGANGAPGTGANGGDAGWL 41
>gi|121636668|ref|YP_976891.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224989140|ref|YP_002643827.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121492315|emb|CAL70782.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772253|dbj|BAH25059.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600684|emb|CCC63354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=797
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/66 (52%), Positives = 38/66 (58%), Gaps = 18/66 (27%)
Query 349 GGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPG 408
G TG GGI GLLLG DG NAPAS +PLHT +QQALAA+NAP Q +TG
Sbjct 410 GDTGAGGISGLLLGADGFNAPASASPLHTLKQQALAAINAPTQTLTG------------- 456
Query 409 SGAPGG 414
Sbjct 457 -----R 457
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|224990143|ref|YP_002644830.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224773256|dbj|BAH26062.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601686|emb|CCC64359.1| PE-PGRS family protein wag22b [second part] [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=803
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/90 (62%), Positives = 64/90 (72%), Gaps = 3/90 (3%)
Query 364 DGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGG 423
DG NAP ST+P H QQ L+ +N P +A+TGRPLIGNG +G PG+G GG GGWLFG G
Sbjct 403 DGYNAPESTSPWHNLQQDILSFINEPTEALTGRPLIGNGDSGTPGTGDDGGAGGWLFGNG 462
Query 424 GTGGSGVSGGAGGDGGAGG---ILFGAGGA 450
G GG+G +G G GGAGG ILFG GGA
Sbjct 463 GNGGAGAAGTNGSAGGAGGAGGILFGTGGA 492
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/38 (72%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 382 ALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
L ++NAP+ A TGRPLIGNGANGAPG+GA GG GWL
Sbjct 4 LLNSINAPVLAATGRPLIGNGANGAPGTGANGGDAGWL 41
>gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=910
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/29 (80%), Positives = 28/29 (97%), Gaps = 0/29 (0%)
Query 383 LAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
LAA+NAP+Q++TGRPLIGNGANG PG+GA
Sbjct 102 LAAINAPVQSLTGRPLIGNGANGTPGTGA 130
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/112 (37%), Positives = 45/112 (41%), Gaps = 50/112 (44%)
Query 367 NAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFGGGGTG 426
NAP ST+P+HT QQQAL A+NAPIQA TGRPLIGN G PG G GT
Sbjct 482 NAPTSTSPIHTLQQQALNAINAPIQAATGRPLIGN--------GTPGD------AGSGTD 527
Query 427 GS------------------------------------GVSGGAGGDGGAGG 442
G+ G G G D GG
Sbjct 528 GTPGGWLLGDGGAGGSGGTGLDGGDGGAAGLMGTGGTGGAGGWGGTDEITGG 579
>gi|339630814|ref|YP_004722456.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
gi|339330170|emb|CCC25828.1| PE-PGRS family protein [Mycobacterium africanum GM041182]
Length=843
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/117 (40%), Positives = 51/117 (44%), Gaps = 54/117 (46%)
Query 295 GGAGLIGNGGNGGSGGTSVATGGAGNGGAGGAGGGAGLIGNGGNGGSGGMGDAPGGTGVG 354
G G AGG +GL
Sbjct 440 GDTG---------------------------AGGISGL---------------------- 450
Query 355 GIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
LLG DG NAPAS +PLHT +QQALAA+NAP Q +TGRPLIGNG GA GSGA
Sbjct 451 -----LLGADGFNAPASASPLHTLKQQALAAINAPTQTLTGRPLIGNGTPGAVGSGA 502
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|31791932|ref|NP_854425.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617519|emb|CAD93629.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=797
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/62 (52%), Positives = 35/62 (57%), Gaps = 18/62 (29%)
Query 349 GGTGVGGIGGLLLGLDGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPG 408
G TG GGI GLLLG DG NAPAS +PLHT +QQALAA+NAP Q
Sbjct 410 GDTGAGGISGLLLGADGFNAPASASPLHTLKQQALAAINAPTQ----------------- 452
Query 409 SG 410
Sbjct 453 -T 453
>gi|148660521|ref|YP_001282044.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148821951|ref|YP_001286705.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|253797691|ref|YP_003030692.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|148504673|gb|ABQ72482.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra]
gi|148720478|gb|ABR05103.1| PE-PGRS family protein [Mycobacterium tuberculosis F11]
gi|253319194|gb|ACT23797.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457470|gb|AEB02893.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207]
gi|344218571|gb|AEM99201.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2]
Length=783
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|15840158|ref|NP_335195.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
gi|13880310|gb|AAK45009.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551]
Length=783
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|57116773|ref|YP_177750.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv]
gi|7441228|pir||E70824 hypothetical glycine-rich protein Rv0746 - Mycobacterium tuberculosis
(strain H37RV)
gi|38490225|emb|CAE55316.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv]
Length=783
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|339293770|gb|AEJ45881.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079]
Length=783
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|294996232|ref|ZP_06801923.1| PE-PGRS family protein [Mycobacterium tuberculosis 210]
Length=784
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/39 (72%), Positives = 31/39 (80%), Gaps = 0/39 (0%)
Query 373 NPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGA 411
NP + QQ LAAVNA A+TGRPLIGNGANGAPG+GA
Sbjct 100 NPAQSVQQDLLAAVNAQSVALTGRPLIGNGANGAPGTGA 138
>gi|31792948|ref|NP_855441.1| hypothetical protein Mb1789c [Mycobacterium bovis AF2122/97]
gi|31618539|emb|CAD94491.1| PE-PGRS FAMILY PROTEIN WAG22B [SECOND PART] [Mycobacterium bovis
AF2122/97]
Length=820
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/38 (72%), Positives = 31/38 (82%), Gaps = 0/38 (0%)
Query 382 ALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
L ++NAP+ A TGRPLIGNGANGAPG+GA GG GWL
Sbjct 4 LLNSINAPVLAATGRPLIGNGANGAPGTGANGGDAGWL 41
>gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M]
Length=893
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/44 (55%), Positives = 30/44 (69%), Gaps = 4/44 (9%)
Query 364 DGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
+ ANA +PL T AL A+N P+Q +TGRPL+GNGANG P
Sbjct 91 EAANASFLQDPLQT----ALNAINTPVQDLTGRPLVGNGANGVP 130
>gi|183981609|ref|YP_001849900.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183174935|gb|ACC40045.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=3634
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/28 (65%), Positives = 21/28 (75%), Gaps = 0/28 (0%)
Query 378 AQQQALAAVNAPIQAVTGRPLIGNGANG 405
+Q L AVNAP+Q + GRPLIGNGAN
Sbjct 95 VEQNLLNAVNAPVQTLLGRPLIGNGANA 122
>gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=1451
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/34 (65%), Positives = 25/34 (74%), Gaps = 0/34 (0%)
Query 360 LLGLDGANAPASTNPLHTAQQQALAAVNAPIQAV 393
LLGLDG NA ST+PLH QQQ L A+NAP A+
Sbjct 761 LLGLDGFNASGSTSPLHILQQQTLNAINAPFDAL 794
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/28 (72%), Positives = 22/28 (79%), Gaps = 1/28 (3%)
Query 381 QALAAVN-APIQAVTGRPLIGNGANGAP 407
QAL + AP QA+ GRPLIGNGANGAP
Sbjct 99 QALYDLVNAPTQALLGRPLIGNGANGAP 126
>gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99]
Length=870
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/44 (55%), Positives = 29/44 (66%), Gaps = 4/44 (9%)
Query 364 DGANAPASTNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
+ ANA +PL T AL A N P+Q +TGRPL+GNGANG P
Sbjct 91 EAANASFLQDPLQT----ALNATNKPVQDLTGRPLVGNGANGVP 130
>gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183176277|gb|ACC41387.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=866
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/34 (62%), Positives = 26/34 (77%), Gaps = 4/34 (11%)
Query 374 PLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAP 407
PL + A+N+P+QA+TGRPLIGNGANGAP
Sbjct 97 PLQQLLE----AINSPVQALTGRPLIGNGANGAP 126
>gi|183980217|ref|YP_001848508.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183173543|gb|ACC38653.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=850
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/47 (64%), Positives = 31/47 (66%), Gaps = 0/47 (0%)
Query 375 LHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWLFG 421
L T L AVNAP QA T RPLIGNG GAPG+G GG GGWL G
Sbjct 102 LQTLPLDVLNAVNAPFQAFTDRPLIGNGVAGAPGTGQNGGAGGWLIG 148
>gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M]
Length=910
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/20 (85%), Positives = 19/20 (95%), Gaps = 0/20 (0%)
Query 385 AVNAPIQAVTGRPLIGNGAN 404
AVNAP+Q +TGRPLIGNGAN
Sbjct 104 AVNAPVQTLTGRPLIGNGAN 123
>gi|121636192|ref|YP_976415.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988665|ref|YP_002643352.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121491839|emb|CAL70302.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224771778|dbj|BAH24584.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600208|emb|CCC62878.1| PE-PGRS family protein [first part] [Mycobacterium bovis BCG
str. Moreau RDJ]
Length=916
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/48 (61%), Positives = 32/48 (67%), Gaps = 7/48 (14%)
Query 372 TNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
T+PL LA +N A TGRPLIGNGANGAPG+GA G GGWL
Sbjct 95 TSPL-------LAPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWL 135
>gi|31791456|ref|NP_853949.1| hypothetical protein Mb0285c [Mycobacterium bovis AF2122/97]
gi|31617041|emb|CAD93149.1| PE-PGRS FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length=868
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/48 (61%), Positives = 32/48 (67%), Gaps = 7/48 (14%)
Query 372 TNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
T+PL LA +N A TGRPLIGNGANGAPG+GA G GGWL
Sbjct 95 TSPL-------LAPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWL 135
>gi|183981863|ref|YP_001850154.1| PE-PGRS family protein [Mycobacterium marinum M]
gi|183175189|gb|ACC40299.1| PE-PGRS family protein [Mycobacterium marinum M]
Length=859
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 22/25 (88%), Gaps = 0/25 (0%)
Query 383 LAAVNAPIQAVTGRPLIGNGANGAP 407
LAA+NAP A+TGRPLIGNGANG P
Sbjct 103 LAAINAPALALTGRPLIGNGANGTP 127
>gi|224988667|ref|YP_002643354.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|224771780|dbj|BAH24586.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length=834
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/48 (61%), Positives = 32/48 (67%), Gaps = 7/48 (14%)
Query 372 TNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
T+PL LA +N A TGRPLIGNGANGAPG+GA G GGWL
Sbjct 95 TSPL-------LAPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWL 135
>gi|121636194|ref|YP_976417.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|121491841|emb|CAL70304.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|341600210|emb|CCC62880.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length=834
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/48 (61%), Positives = 32/48 (67%), Gaps = 7/48 (14%)
Query 372 TNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
T+PL LA +N A TGRPLIGNGANGAPG+GA G GGWL
Sbjct 95 TSPL-------LAPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWL 135
>gi|31791458|ref|NP_853951.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97]
gi|31617043|emb|CAD93151.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length=831
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/48 (61%), Positives = 32/48 (67%), Gaps = 7/48 (14%)
Query 372 TNPLHTAQQQALAAVNAPIQAVTGRPLIGNGANGAPGSGAPGGHGGWL 419
T+PL LA +N A TGRPLIGNGANGAPG+GA G GGWL
Sbjct 95 TSPL-------LAPINEFFLANTGRPLIGNGANGAPGTGADGAPGGWL 135
>gi|183981217|ref|YP_001849508.1| PE-PGRS family protein, PE_PGRS9_4 [Mycobacterium marinum M]
gi|183174543|gb|ACC39653.1| PE-PGRS family protein, PE_PGRS9_4 [Mycobacterium marinum M]
Length=881
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/22 (78%), Positives = 21/22 (96%), Gaps = 0/22 (0%)
Query 383 LAAVNAPIQAVTGRPLIGNGAN 404
LAA+NAP+ ++TGRPLIGNGAN
Sbjct 110 LAAINAPVLSLTGRPLIGNGAN 131
Lambda K H
0.307 0.145 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 1782500084724
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40