BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0834c Length=882 Score E Sequences producing significant alignments: (Bits) Value gi|57116789|ref|YP_177761.1| PE-PGRS family protein [Mycobacteri... 1404 0.0 gi|341600773|emb|CCC63444.1| PE-PGRS family protein [Mycobacteri... 1400 0.0 gi|339293849|gb|AEJ45960.1| PE-PGRS family protein [Mycobacteriu... 1400 0.0 gi|294996315|ref|ZP_06802006.1| PE-PGRS family protein [Mycobact... 1395 0.0 gi|339297490|gb|AEJ49600.1| PE-PGRS family protein [Mycobacteriu... 211 4e-52 gi|31792022|ref|NP_854515.1| PE-PGRS family protein [Mycobacteri... 210 7e-52 gi|15840246|ref|NP_335283.1| PE_PGRS family protein [Mycobacteri... 210 8e-52 gi|297730334|ref|ZP_06959452.1| PE-PGRS family protein [Mycobact... 210 8e-52 gi|297633349|ref|ZP_06951129.1| PE-PGRS family protein [Mycobact... 210 8e-52 gi|148822040|ref|YP_001286794.1| PE-PGRS family protein [Mycobac... 210 9e-52 gi|340625848|ref|YP_004744300.1| PE-PGRS family protein [Mycobac... 207 8e-51 gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobac... 148 3e-33 gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobac... 141 6e-31 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 141 7e-31 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 140 8e-31 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 140 1e-30 gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobact... 140 1e-30 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 140 1e-30 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 138 4e-30 gi|183980520|ref|YP_001848811.1| PE-PGRS family protein [Mycobac... 138 4e-30 gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS... 134 7e-29 gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobac... 133 2e-28 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 133 2e-28 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 132 2e-28 gi|118616873|ref|YP_905205.1| PE-PGRS family protein [Mycobacter... 132 4e-28 gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobac... 131 5e-28 gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacter... 131 5e-28 gi|118616393|ref|YP_904725.1| PE-PGRS family protein [Mycobacter... 131 6e-28 gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobac... 130 7e-28 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 130 8e-28 gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobac... 130 9e-28 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 130 1e-27 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 130 1e-27 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 130 1e-27 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 129 2e-27 gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobac... 126 2e-26 gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted p... 126 2e-26 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 126 2e-26 gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024... 125 3e-26 gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobac... 125 3e-26 gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [... 125 5e-26 gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacteri... 124 5e-26 gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [... 124 6e-26 gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobac... 124 7e-26 gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacteri... 124 7e-26 gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacteriu... 124 8e-26 gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobac... 124 9e-26 gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS... 124 1e-25 gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacteriu... 124 1e-25 >gi|57116789|ref|YP_177761.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|121636757|ref|YP_976980.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148660611|ref|YP_001282134.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] 14 more sequence titles Length=882 Score = 1404 bits (3633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 882/882 (100%), Positives = 882/882 (100%), Gaps = 0/882 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA Sbjct 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 Query 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA Sbjct 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 Query 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG Sbjct 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 Query 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG Sbjct 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 Query 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV Sbjct 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 Query 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI Sbjct 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 Query 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG Sbjct 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 Query 541 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR Sbjct 541 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 Query 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA Sbjct 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 Query 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG Sbjct 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 Query 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV Sbjct 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 Query 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV Sbjct 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 Query 841 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP Sbjct 841 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 >gi|341600773|emb|CCC63444.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=882 Score = 1400 bits (3625), Expect = 0.0, Method: Compositional matrix adjust. Identities = 881/882 (99%), Positives = 881/882 (99%), Gaps = 0/882 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA Sbjct 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 Query 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA Sbjct 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 Query 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG Sbjct 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 Query 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG Sbjct 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 Query 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV Sbjct 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 Query 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI Sbjct 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 Query 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG Sbjct 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 Query 541 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 FVGAG NGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR Sbjct 541 FVGAGTNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 Query 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA Sbjct 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 Query 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG Sbjct 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 Query 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV Sbjct 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 Query 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV Sbjct 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 Query 841 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP Sbjct 841 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 >gi|339293849|gb|AEJ45960.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=882 Score = 1400 bits (3625), Expect = 0.0, Method: Compositional matrix adjust. Identities = 881/882 (99%), Positives = 881/882 (99%), Gaps = 0/882 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA Sbjct 121 FIGNGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGA 180 Query 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA Sbjct 181 SGGKGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGA 240 Query 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG Sbjct 241 GGAGGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGG 300 Query 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG Sbjct 301 AGGSGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGG 360 Query 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV Sbjct 361 AATTGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGV 420 Query 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI Sbjct 421 GVGGAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLI 480 Query 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG Sbjct 481 GAGIGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFG 540 Query 541 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR Sbjct 541 FVGAGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSAR 600 Query 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA Sbjct 601 GLIFALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGA 660 Query 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG Sbjct 661 GGDGVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGG 720 Query 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV Sbjct 721 AGGTATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAV 780 Query 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV Sbjct 781 GIAVGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVV 840 Query 841 NGMLAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 NGMLAPSTLGYGGNGGNG NGGAGGTGGKAGVFGAPGQNGLP Sbjct 841 NGMLAPSTLGYGGNGGNGGNGGAGGTGGKAGVFGAPGQNGLP 882 >gi|294996315|ref|ZP_06802006.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=879 Score = 1395 bits (3611), Expect = 0.0, Method: Compositional matrix adjust. Identities = 878/879 (99%), Positives = 879/879 (100%), Gaps = 0/879 (0%) Query 4 VIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQQYQ 63 +IAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQQYQ Sbjct 1 MIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQQYQ 60 Query 64 AMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRPFIG 123 AMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRPFIG Sbjct 61 AMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRPFIG 120 Query 124 NGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGASGG 183 NGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGASGG Sbjct 121 NGTNGAPGTGEAGGPGGWLLGNGGNGGSGAPGQTGGAGGAAGLLGHGGTGGAGGTGASGG 180 Query 184 KGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGAGGA 243 KGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGAGGA Sbjct 181 KGGTGGWLWGSGGAGGAGGSGGGSGGAGGNALMFGIGGNGGAGGAASGVGNGGVGGAGGA 240 Query 244 GGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGGAGG 303 GGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGGAGG Sbjct 241 GGALVAIGGAGGAGGAATTGTGGAGGAGSNALGLFLGLGGSGGQGGDSAMGSGGAGGAGG 300 Query 304 SGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGGAAT 363 SGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGGAAT Sbjct 301 SGGAASPFGIDIGIGGAGGHGGAGTNGGAGGAGGAGGSSGTVFALDLSWGGAGGNGGAAT 360 Query 364 TGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGVGVG 423 TGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGVGVG Sbjct 361 TGTGGAGGTGGFAVAPDFIGFGAAYGGAGGLGGAATGAGGTGGTGGVGAGGFAALGVGVG 420 Query 424 GAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLIGAG 483 GAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLIGAG Sbjct 421 GAGGAGGAATETGGIGGAGGLGVGLLGGAGGAGGPGGAASAGSGGHGGTGGDALGLIGAG 480 Query 484 IGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFGFVG 543 IGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFGFVG Sbjct 481 IGGVGGVGGAATDTGGNGGAGGSGTGLLGGVGGAGGHGGGASVGTGGSGGAGGDGFGFVG 540 Query 544 AGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSARGLI 603 AGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSARGLI Sbjct 541 AGGNGGNAGTGVGVNGANGGNGGSATGALAAVGGAGAAGGDATSGTGGFGGAGGSARGLI 600 Query 604 FALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGAGGD 663 FALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGAGGD Sbjct 601 FALGGAGAAGGDASTGVGGPGGPGGTGTASSPFGIAIAIGGAGAQGGAGTSGATGGAGGD 660 Query 664 GVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGGAGG 723 GVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGGAGG Sbjct 661 GVFEGIAVLGLGFGGAAGAGGAATGDGATGGAGGFGGAGAGIANFLGFSVLHGGAGGAGG 720 Query 724 TATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAVGIA 783 TATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAVGIA Sbjct 721 TATGTGGNGGAGGGGGLSSPVILGIGIGGAGGDGGGALGVLGGMGGDGGDGGEAVAVGIA 780 Query 784 VGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVVNGM 843 VGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVVNGM Sbjct 781 VGGAGGAGGAAPTGNGGAGGNGGDALGLVGVGGNGGNAGTGFGANTGGNGGDTTIVVNGM 840 Query 844 LAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 882 LAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP Sbjct 841 LAPSTLGYGGNGGNGVNGGAGGTGGKAGVFGAPGQNGLP 879 >gi|339297490|gb|AEJ49600.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=478 Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|31792022|ref|NP_854515.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617609|emb|CAD93719.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=831 Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|15840246|ref|NP_335283.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13880404|gb|AAK45097.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=879 Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|297730334|ref|ZP_06959452.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=432 Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|297633349|ref|ZP_06951129.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=451 Score = 210 bits (535), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|148822040|ref|YP_001286794.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148720567|gb|ABR05192.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=879 Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust. Identities = 130/130 (100%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP Sbjct 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|340625848|ref|YP_004744300.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004038|emb|CCC43174.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=881 Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 128/130 (99%), Positives = 130/130 (100%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ Sbjct 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 QYQA+SAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQG+LGAINAPAAALSGRP Sbjct 61 QYQAISAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGVLGAINAPAAALSGRP 120 Query 121 FIGNGTNGAP 130 FIGNGTNGAP Sbjct 121 FIGNGTNGAP 130 >gi|183984370|ref|YP_001852661.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177696|gb|ACC42806.1| PE-PGRS family protein [Mycobacterium marinum M] Length=910 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 87/133 (66%), Positives = 103/133 (78%), Gaps = 4/133 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA PDLVA A +LAG+G++L+ A AAA T+G+LAAAGDEVSAAIAA+FS+HGQ Sbjct 1 MSYVIAVPDLVAGAASELAGVGSTLSTATTAAAAQTTGVLAAAGDEVSAAIAAVFSAHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQ +SAQA FHA+FVQAL+ AY AEAA+ASPL GLL AINAP +L+GRP Sbjct 61 SYQTLSAQAETFHAQFVQALSAGASAYTQAEAASASPL----AGLLAAINAPVQSLTGRP 116 Query 121 FIGNGTNGAPGTG 133 IGNG NG PGTG Sbjct 117 LIGNGANGTPGTG 129 >gi|183985330|ref|YP_001853621.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178656|gb|ACC43766.1| PE-PGRS family protein [Mycobacterium marinum M] Length=2001 Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 80/130 (62%), Positives = 98/130 (76%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA PD++A A DL IG++L AAN+AA T+GLLAAA DEVS AIA+LFS+ Q Sbjct 1 MSYVIATPDMLAAAASDLTNIGSTLGAANSAALARTTGLLAAAEDEVSTAIASLFSASAQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQ +S +AA HA FV +L A AYAAAEA NASPLQTLEQ +L AINAP+ AL+ RP Sbjct 61 EYQMVSTRAAHLHAEFVHSLTRAGAAYAAAEAVNASPLQTLEQNVLAAINAPSQALTARP 120 Query 121 FIGNGTNGAP 130 G+G +GAP Sbjct 121 LFGDGADGAP 130 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 89/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AN+AAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 89/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AN+AAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 89/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AN+AAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|339294426|gb|AEJ46537.1| putative PE family protein [Mycobacterium tuberculosis CCDC5079] Length=1330 Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 71/122 (59%), Positives = 88/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI P+ VA A D+A IG+S+ AN+AAA T+ +LAA DEVSAAIA LF SH + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 FI 122 I Sbjct 122 LI 123 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust. Identities = 72/122 (60%), Positives = 88/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI P+LVA A D+A IG+ AAN+ AA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RFVQ L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/122 (58%), Positives = 88/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI P+ VA A D+A IG+S+ AN+AAA T+ +LAA D+VSAAIA LF SH + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 FI 122 I Sbjct 122 LI 123 >gi|183980520|ref|YP_001848811.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183173846|gb|ACC38956.1| PE-PGRS family protein [Mycobacterium marinum M] Length=824 Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust. Identities = 70/97 (73%), Positives = 78/97 (81%), Gaps = 0/97 (0%) Query 34 VPTSGLLAAAGDEVSAAIAALFSSHGQQYQAMSAQAAAFHARFVQALAGAMGAYAAAEAA 93 V T+ L+AAAGDEVSAAIAALFS H QYQA+SA+A AFH RFVQAL G + YAAAE A Sbjct 34 VSTTRLMAAAGDEVSAAIAALFSDHALQYQAVSAEAVAFHGRFVQALTGGVQMYAAAETA 93 Query 94 NASPLQTLEQGLLGAINAPAAALSGRPFIGNGTNGAP 130 N + LQTL Q LLG +NAPAAA+ GRP IGNGTNGAP Sbjct 94 NTASLQTLGQDLLGMVNAPAAAVLGRPLIGNGTNGAP 130 >gi|183984569|ref|YP_001852860.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177895|gb|ACC43005.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1251 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 75/111 (68%), Positives = 86/111 (78%), Gaps = 0/111 (0%) Query 17 DLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQQYQAMSAQAAAFHARF 76 DL GIG +L AA AAAA T+ L+AAAGDEVS AIA LFS H Q YQA+SAQ AAFH RF Sbjct 18 DLTGIGEALRAATAAAAPSTTSLVAAAGDEVSTAIATLFSEHAQSYQALSAQMAAFHDRF 77 Query 77 VQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRPFIGNGTN 127 + ALAGA G+YA+AEAAN +PLQT+EQ LLGA+NAP L GR IG+G N Sbjct 78 MNALAGASGSYASAEAANVTPLQTIEQDLLGAVNAPTQVLFGRGLIGDGAN 128 >gi|183982702|ref|YP_001850993.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] gi|183176028|gb|ACC41138.1| PE-PGRS family protein, PE_PGRS9_1 [Mycobacterium marinum M] Length=893 Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 78/130 (60%), Positives = 94/130 (73%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 M+FV+A PD+VA A DLAG+G+ + AAN AAA T+G++AAA DEVSAAIAALFS HGQ Sbjct 1 MAFVLAVPDMVAGAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQ +SA+ A FHA+F + LA AY+ AEAANAS LQ Q L AIN P L+GRP Sbjct 61 AYQQISARVAEFHAQFERVLAAGAQAYSGAEAANASFLQDPLQTALNAINTPVQDLTGRP 120 Query 121 FIGNGTNGAP 130 +GNG NG P Sbjct 121 LVGNGANGVP 130 >gi|183982116|ref|YP_001850407.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175442|gb|ACC40552.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1386 Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 67/122 (55%), Positives = 86/122 (71%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFV AP++VA+A DL +G++++AAN AAA T+ +LAA DEVSA IAALF +H Sbjct 1 MSFVGVAPEMVAVAASDLERLGSTISAANVAAAGSTTTILAAGADEVSAVIAALFGTHAL 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q + FH +FVQ L +GAY+AAE N PLQ +EQ LL +NAP AL GRP Sbjct 61 EYQAISTQLSVFHEQFVQTLTNGVGAYSAAELVNVLPLQNVEQDLLNLVNAPTQALFGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/130 (55%), Positives = 90/130 (70%), Gaps = 7/130 (5%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIA P+++ A DLA IG+++TAAN AAA + +L A+ DEVS A+AALF +H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQ +SAQ A FH RFVQ L+ +Y AAEA N +EQ LL A+NAP AL GRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 FIGNGTNGAP 130 IGNG +G+P Sbjct 114 LIGNGADGSP 123 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 71/130 (55%), Positives = 90/130 (70%), Gaps = 7/130 (5%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFVIA P+++ A DLA IG+++TAAN AAA + +L A+ DEVS A+AALF +H Q Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQ +SAQ A FH RFVQ L+ +Y AAEA N +EQ LL A+NAP AL GRP Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVN------VEQSLLAAVNAPTQALFGRP 113 Query 121 FIGNGTNGAP 130 IGNG +G+P Sbjct 114 LIGNGADGSP 123 >gi|118616873|ref|YP_905205.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568983|gb|ABL03734.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=789 Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/97 (71%), Positives = 76/97 (79%), Gaps = 0/97 (0%) Query 34 VPTSGLLAAAGDEVSAAIAALFSSHGQQYQAMSAQAAAFHARFVQALAGAMGAYAAAEAA 93 V T+ L+AAAGDEVSA IAALFS H QYQA+SA+A AFH RFVQAL G + YAAAE A Sbjct 34 VSTTRLMAAAGDEVSADIAALFSDHALQYQAVSAEAVAFHGRFVQALTGGVQMYAAAETA 93 Query 94 NASPLQTLEQGLLGAINAPAAALSGRPFIGNGTNGAP 130 N + LQTL Q LLG +NA AAA+ GRP IGNGTNGAP Sbjct 94 NTASLQTLGQDLLGMVNALAAAVLGRPLIGNGTNGAP 130 >gi|183981221|ref|YP_001849512.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174547|gb|ACC39657.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1610 Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 74/128 (58%), Positives = 93/128 (73%), Gaps = 4/128 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 M +V+AAP+++++A DLA IG++L AANAAA PT +LAAA DEVS AIA LF ++ + Sbjct 1 MGYVVAAPEILSVAASDLANIGSALQAANAAATTPTVSVLAAAADEVSEAIAELFGTYAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQA+SAQAA FHA FVQA+ Y+A E ANASPLQTL LGA+NA A+ GRP Sbjct 61 DYQAISAQAARFHAEFVQAVNADAEWYSATEVANASPLQTL----LGAVNAQTEAMIGRP 116 Query 121 FIGNGTNG 128 IGNG +G Sbjct 117 LIGNGADG 124 >gi|118618448|ref|YP_906780.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118570558|gb|ABL05309.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=870 Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust. Identities = 75/130 (58%), Positives = 92/130 (71%), Gaps = 0/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 M+FV+A PD+VA A DLAG+G+ + AAN AAA T+G++AAA DEVSAAIAALFS HGQ Sbjct 1 MAFVLAVPDMVAEAAADLAGVGSVIDAANTAAAGSTTGIVAAAEDEVSAAIAALFSGHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQ +S + A FHA+F + A + AY+ AEAANAS LQ Q L A N P L+GRP Sbjct 61 AYQQISTRVAEFHAQFERVFAAGVQAYSGAEAANASFLQDPLQTALNATNKPVQDLTGRP 120 Query 121 FIGNGTNGAP 130 +GNG NG P Sbjct 121 LVGNGANGVP 130 >gi|118616393|ref|YP_904725.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568503|gb|ABL03254.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=889 Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust. Identities = 86/127 (68%), Positives = 102/127 (81%), Gaps = 0/127 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+V+A PD++A A D+AGIG+S+ AAN AA T+G++AAA DEVS AIAALFS HGQ Sbjct 1 MSYVVAIPDMLASAAADVAGIGSSVGAANTAAVGATTGVMAAADDEVSVAIAALFSGHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQA+SAQAAAFH +F++AL GA GAYAAAEAANASPLQ EQ +L INAP AL GRP Sbjct 61 AYQAISAQAAAFHDQFLRALTGAGGAYAAAEAANASPLQAAEQEVLAVINAPTNALLGRP 120 Query 121 FIGNGTN 127 IGNGT+ Sbjct 121 LIGNGTD 127 >gi|183985312|ref|YP_001853603.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178638|gb|ACC43748.1| PE-PGRS family protein [Mycobacterium marinum M] Length=846 Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 71/130 (55%), Positives = 93/130 (72%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAG-DEVSAAIAALFSSHG 59 MS+V A+P+++ A +++ IG+SL ANA+AA PT+ LL+A G DEVSAA+ A+F +H Sbjct 1 MSYVFASPEVLNAAAAEVSTIGSSLQTANASAAAPTTALLSALGADEVSAAVTAMFGNHA 60 Query 60 QQYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGR 119 Q YQA+S QAA FH RFV AL AY++AEA+ A+ LQ+L Q LL +NAP AL GR Sbjct 61 QAYQAVSTQAAEFHDRFVAALTAGADAYSSAEASTAATLQSLPQDLLNVVNAPTQALLGR 120 Query 120 PFIGNGTNGA 129 IGNG NGA Sbjct 121 ALIGNGANGA 130 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 90/122 (74%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AANAAAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|183981460|ref|YP_001849751.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183174786|gb|ACC39896.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1483 Score = 130 bits (328), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 74/127 (59%), Positives = 89/127 (71%), Gaps = 6/127 (4%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFV AP++VA A EDLAGIG+S++AANAAA T+ ++ AA DEVSAAIAALF SH + Sbjct 1 MSFVNVAPEMVAAAVEDLAGIGSSISAANAAAVALTTDVVPAAADEVSAAIAALFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SAQ+AAFH R VQ L AY E ANA +Q LL A+N P A GRP Sbjct 61 EYQAISAQSAAFHERLVQTLRSGASAYLGTELANA------QQNLLNAVNGPTQAWLGRP 114 Query 121 FIGNGTN 127 IGNGT+ Sbjct 115 LIGNGTD 121 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 90/122 (74%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AANAAAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 90/122 (74%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AANAAAA T+ +LAA DEVSAAIA LF SH + Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 FI 122 I Sbjct 122 LI 123 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 74/122 (61%), Positives = 90/122 (74%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI AP+ VA A D+A IG+S+ AANAAAA T+ +LAA DEVSAAIA LF SH + Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 121 FI 122 I Sbjct 121 LI 122 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 73/122 (60%), Positives = 89/122 (73%), Gaps = 0/122 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS VI P+ VA A D+A IG+S+ AANAAAA T+ +LAA DEVSAAIA LF SH + Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+S Q AAFH RF Q L+ A+G+Y +AEA NA+PL TLE +L A+NAP AL GRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 121 FI 122 I Sbjct 122 LI 123 >gi|339632516|ref|YP_004724158.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339331872|emb|CCC27575.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1657 Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/128 (55%), Positives = 93/128 (73%), Gaps = 4/128 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA P+++A A DLA IG+ ++AA+A AA+PT+ ++AA DEVSA IAALFS+H Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SAQAAAFH +FV L A Y A E ANA+ ++ +LGA+NAP L GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116 Query 121 FIGNGTNG 128 IG+G +G Sbjct 117 LIGDGAHG 124 >gi|289553720|ref|ZP_06442930.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289438352|gb|EFD20845.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=1323 Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/128 (55%), Positives = 93/128 (73%), Gaps = 4/128 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA P+++A A DLA IG+ ++AA+A AA+PT+ ++AA DEVSA IAALFS+H Q Sbjct 6 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 65 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SAQAAAFH +FV L A Y A E ANA+ ++ +LGA+NAP L GRP Sbjct 66 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 121 Query 121 FIGNGTNG 128 IG+G +G Sbjct 122 LIGDGAHG 129 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 70/128 (55%), Positives = 93/128 (73%), Gaps = 4/128 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA P+++A A DLA IG+ ++AA+A AA+PT+ ++AA DEVSA IAALFS+H Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SAQAAAFH +FV L A Y A E ANA+ ++ +LGA+NAP L GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116 Query 121 FIGNGTNG 128 IG+G +G Sbjct 117 LIGDGAHG 124 >gi|253798432|ref|YP_003031433.1| hypothetical protein TBMG_04024 [Mycobacterium tuberculosis KZN 1435] gi|253319935|gb|ACT24538.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 1435] gi|328458200|gb|AEB03623.1| hypothetical protein TBSG_01494 [Mycobacterium tuberculosis KZN 4207] Length=1616 Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 70/128 (55%), Positives = 93/128 (73%), Gaps = 4/128 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS+VIA P+++A A DLA IG+ ++AA+A AA+PT+ ++AA DEVSA IAALFS+H Q Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SAQAAAFH +FV L A Y A E ANA+ ++ +LGA+NAP L GRP Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRV----VLGAVNAPTQTLLGRP 116 Query 121 FIGNGTNG 128 IG+G +G Sbjct 117 LIGDGAHG 124 >gi|183982951|ref|YP_001851242.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183176277|gb|ACC41387.1| PE-PGRS family protein [Mycobacterium marinum M] Length=866 Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 77/130 (60%), Positives = 93/130 (72%), Gaps = 4/130 (3%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 M+ + A P++V A +L IG+S+ ANA A T+ ++AAA DEVSAAIAALFS HGQ Sbjct 1 MTALTAVPEIVVHAATELRDIGSSVNTANAMATTQTTTIVAAAQDEVSAAIAALFSVHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQ +SAQA FH +FV+AL+ A GAYAAAEAAN PL Q LL AIN+P AL+GRP Sbjct 61 TYQQLSAQAITFHEQFVRALSSAGGAYAAAEAANTGPL----QQLLEAINSPVQALTGRP 116 Query 121 FIGNGTNGAP 130 IGNG NGAP Sbjct 117 LIGNGANGAP 126 >gi|339299780|gb|AEJ51890.1| hypothetical protein CCDC5180_3053 [Mycobacterium tuberculosis CCDC5180] Length=1562 Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 119 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 120 LIGDGVHGAP 129 >gi|15842940|ref|NP_337977.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13883276|gb|AAK47791.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1507 Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 >gi|339296173|gb|AEJ48284.1| hypothetical protein CCDC5079_3095 [Mycobacterium tuberculosis CCDC5079] Length=1536 Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 1 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 59 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 60 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 119 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 120 LIGDGVHGAP 129 >gi|148824551|ref|YP_001289305.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148723078|gb|ABR07703.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=1570 Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 >gi|57117094|ref|YP_177962.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148663207|ref|YP_001284730.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476148|pir||H70846 hypothetical glycine-rich protein Rv3345c - Mycobacterium tuberculosis (strain H37RV) gi|38490359|emb|CAE55587.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148507359|gb|ABQ75168.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1538 Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 >gi|340628328|ref|YP_004746780.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059] gi|340006518|emb|CCC45702.1| pe_pgrs50 protein [Mycobacterium canettii CIPT 140010059] Length=2008 Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 >gi|339633355|ref|YP_004724997.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332711|emb|CCC28429.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1916 Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 >gi|183984369|ref|YP_001852660.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] gi|183177695|gb|ACC42805.1| PE-PGRS family protein, PE_PGRS9_3 [Mycobacterium marinum M] Length=910 Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 91/143 (64%), Positives = 103/143 (73%), Gaps = 4/143 (2%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MSFV P+ VA A DL GIG+ L ANA AA T+ +LAA GDEVSAAIAALFS HGQ Sbjct 1 MSFVNVTPEAVAAAASDLTGIGSVLGEANAVAARATTTVLAAGGDEVSAAIAALFSFHGQ 60 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 YQ + AQA AFHA+F Q +A G YA+AEAANA+P QGLLGA+NAP L+GRP Sbjct 61 SYQTLGAQAEAFHAQFAQLMANGAGTYASAEAANAAPF----QGLLGAVNAPVQTLTGRP 116 Query 121 FIGNGTNGAPGTGEAGGPGGWLL 143 IGNG NGAPGTG GG GGWL+ Sbjct 117 LIGNGANGAPGTGANGGAGGWLI 139 Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/53 (63%), Positives = 38/53 (72%), Gaps = 0/53 (0%) Query 93 ANASPLQTLEQGLLGAINAPAAALSGRPFIGNGTNGAPGTGEAGGPGGWLLGN 145 A+ SPL TL+Q L AINAP A +GRP IGNGT GA G+G G GGWLLG+ Sbjct 482 ASTSPLHTLQQQALNAINAPVEAATGRPLIGNGTPGAAGSGADGTAGGWLLGD 534 >gi|344221186|gb|AEN01817.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1508 Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 84/130 (65%), Positives = 102/130 (79%), Gaps = 1/130 (0%) Query 1 MSFVIAAPDLVAMATEDLAGIGASLTAANAAAAVPTSGLLAAAGDEVSAAIAALFSSHGQ 60 MS ++A P+LVA A DL GIG +++AANAAAA PT+ +LAAAGDEVSAAIAALF +H Q Sbjct 3 MSLMVA-PELVAAAAADLTGIGQAISAANAAAAGPTTQVLAAAGDEVSAAIAALFGTHAQ 61 Query 61 QYQAMSAQAAAFHARFVQALAGAMGAYAAAEAANASPLQTLEQGLLGAINAPAAALSGRP 120 +YQA+SA+ A FH +FV++L A AYA AEAANASPLQ LEQ +LGAINAP GRP Sbjct 62 EYQALSARVATFHEQFVRSLTAAGSAYATAEAANASPLQALEQQVLGAINAPTQLWLGRP 121 Query 121 FIGNGTNGAP 130 IG+G +GAP Sbjct 122 LIGDGVHGAP 131 Lambda K H 0.309 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2162834517398 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40