BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0851c Length=275 Score E Sequences producing significant alignments: (Bits) Value gi|15840264|ref|NP_335301.1| short chain dehydrogenase [Mycobact... 550 8e-155 gi|15607991|ref|NP_215366.1| short chain dehydrogenase [Mycobact... 548 2e-154 gi|121636774|ref|YP_976997.1| short chain dehydrogenase [Mycobac... 546 1e-153 gi|289446416|ref|ZP_06436160.1| short-chain type dehydrogenase/r... 545 3e-153 gi|31792039|ref|NP_854532.1| short chain dehydrogenase [Mycobact... 544 5e-153 gi|340625865|ref|YP_004744317.1| putative short-chain type dehyd... 543 1e-152 gi|296169511|ref|ZP_06851131.1| short-chain dehydrogenase/reduct... 443 1e-122 gi|345111070|pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c ... 442 4e-122 gi|41406808|ref|NP_959644.1| short chain dehydrogenase [Mycobact... 441 8e-122 gi|183984723|ref|YP_001853014.1| short-chain type dehydrogenase/... 430 1e-118 gi|240173184|ref|ZP_04751842.1| short chain dehydrogenase [Mycob... 427 1e-117 gi|342860372|ref|ZP_08717023.1| short chain dehydrogenase [Mycob... 426 3e-117 gi|118616193|ref|YP_904525.1| short chain dehydrogenase [Mycobac... 422 3e-116 gi|254818647|ref|ZP_05223648.1| short chain dehydrogenase [Mycob... 419 3e-115 gi|149926904|ref|ZP_01915163.1| hypothetical protein LMED105_129... 179 5e-43 gi|119475011|ref|ZP_01615364.1| short chain dehydrogenase [marin... 174 1e-41 gi|226314751|ref|YP_002774647.1| short chain dehydrogenase [Brev... 173 3e-41 gi|302873888|ref|YP_003842521.1| short-chain dehydrogenase/reduc... 168 8e-40 gi|94310784|ref|YP_583994.1| hypothetical protein Rmet_1846 [Cup... 165 6e-39 gi|302873360|ref|YP_003841993.1| short-chain dehydrogenase/reduc... 164 9e-39 gi|186475803|ref|YP_001857273.1| hypothetical protein Bphy_1038 ... 164 1e-38 gi|152982854|ref|YP_001353681.1| hypothetical protein mma_1991 [... 159 4e-37 gi|340788992|ref|YP_004754457.1| short-chain dehydrogenase/reduc... 159 5e-37 gi|334140696|ref|YP_004533898.1| short-chain dehydrogenase/reduc... 157 2e-36 gi|160898804|ref|YP_001564386.1| hypothetical protein Daci_3363 ... 157 2e-36 gi|333915021|ref|YP_004488753.1| short-chain dehydrogenase/reduc... 157 2e-36 gi|338974473|ref|ZP_08629833.1| short-chain dehydrogenase/reduct... 157 2e-36 gi|73541109|ref|YP_295629.1| hypothetical protein Reut_A1415 [Ra... 156 3e-36 gi|170692437|ref|ZP_02883600.1| short-chain dehydrogenase/reduct... 156 3e-36 gi|344174716|emb|CCA86526.1| putative oxidoreductase dehydrogena... 156 3e-36 gi|108761191|ref|YP_628648.1| short chain dehydrogenase/reductas... 155 5e-36 gi|326317178|ref|YP_004234850.1| short-chain dehydrogenase/reduc... 155 7e-36 gi|17546488|ref|NP_519890.1| hypothetical protein RSc1769 [Ralst... 154 1e-35 gi|329912396|ref|ZP_08275744.1| Hypothetical Protein IMCC9480_77... 154 1e-35 gi|254448095|ref|ZP_05061558.1| oxidoreductase, short chain dehy... 154 2e-35 gi|338531018|ref|YP_004664352.1| short chain dehydrogenase/reduc... 153 2e-35 gi|338533004|ref|YP_004666338.1| short chain dehydrogenase [Myxo... 153 2e-35 gi|120611532|ref|YP_971210.1| hypothetical protein Aave_2868 [Ac... 153 2e-35 gi|194289585|ref|YP_002005492.1| hypothetical protein RALTA_A147... 153 3e-35 gi|293608758|ref|ZP_06691061.1| conserved hypothetical protein [... 152 5e-35 gi|50084885|ref|YP_046395.1| short-chain dehydrogenase [Acinetob... 152 6e-35 gi|334140719|ref|YP_004533921.1| short-chain dehydrogenase/reduc... 152 6e-35 gi|260549948|ref|ZP_05824163.1| short chain dehydrogenase [Acine... 152 7e-35 gi|119477670|ref|ZP_01617820.1| hypothetical protein GP2143_0941... 152 7e-35 gi|88703944|ref|ZP_01101659.1| Short-chain dehydrogenase/reducta... 152 7e-35 gi|300691461|ref|YP_003752456.1| oxidoreductase dehydrogenase [R... 152 7e-35 gi|113867547|ref|YP_726036.1| hypothetical protein H16_A1536 [Ra... 152 8e-35 gi|108757113|ref|YP_634033.1| short chain dehydrogenase [Myxococ... 152 8e-35 gi|26988476|ref|NP_743901.1| short chain dehydrogenase [Pseudomo... 151 1e-34 gi|325121477|gb|ADY81000.1| putative short-chain dehydrogenase [... 151 1e-34 >gi|15840264|ref|NP_335301.1| short chain dehydrogenase [Mycobacterium tuberculosis CDC1551] gi|308231654|ref|ZP_07413312.2| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu001] gi|308378737|ref|ZP_07668817.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu010] gi|308379885|ref|ZP_07669069.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu011] gi|13880423|gb|AAK45115.1| oxidoreductase, short-chain dehydrogenase/reductase family [Mycobacterium tuberculosis CDC1551] gi|308216471|gb|EFO75870.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu001] gi|308359370|gb|EFP48221.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu010] gi|308363278|gb|EFP52129.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis SUMu011] Length=278 Score = 550 bits (1417), Expect = 8e-155, Method: Compositional matrix adjust. Identities = 275/275 (100%), Positives = 275/275 (100%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV Sbjct 4 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 63 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 64 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 123 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 124 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 183 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 184 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 243 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 244 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 278 >gi|15607991|ref|NP_215366.1| short chain dehydrogenase [Mycobacterium tuberculosis H37Rv] gi|148660628|ref|YP_001282151.1| short chain dehydrogenase [Mycobacterium tuberculosis H37Ra] gi|148822059|ref|YP_001286813.1| short chain dehydrogenase [Mycobacterium tuberculosis F11] 33 more sequence titles Length=275 Score = 548 bits (1413), Expect = 2e-154, Method: Compositional matrix adjust. Identities = 274/275 (99%), Positives = 275/275 (100%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV Sbjct 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 >gi|121636774|ref|YP_976997.1| short chain dehydrogenase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989245|ref|YP_002643932.1| short-chain dehydrogenase [Mycobacterium bovis BCG str. Tokyo 172] gi|289442260|ref|ZP_06432004.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis T46] 14 more sequence titles Length=275 Score = 546 bits (1407), Expect = 1e-153, Method: Compositional matrix adjust. Identities = 273/275 (99%), Positives = 274/275 (99%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH V Sbjct 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 >gi|289446416|ref|ZP_06436160.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis CPHL_A] gi|289419374|gb|EFD16575.1| short-chain type dehydrogenase/reductase [Mycobacterium tuberculosis CPHL_A] Length=275 Score = 545 bits (1404), Expect = 3e-153, Method: Compositional matrix adjust. Identities = 272/275 (99%), Positives = 273/275 (99%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH V Sbjct 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVVE NLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 181 VSVLCPMVVENNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 >gi|31792039|ref|NP_854532.1| short chain dehydrogenase [Mycobacterium bovis AF2122/97] gi|31617626|emb|CAD93736.1| PUTATIVE SHORT-CHAIN TYPE DEHYDROGENASE/REDUCTASE [Mycobacterium bovis AF2122/97] Length=275 Score = 544 bits (1402), Expect = 5e-153, Method: Compositional matrix adjust. Identities = 272/275 (99%), Positives = 273/275 (99%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH V Sbjct 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGH DVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 61 MCDVRHREEVTHLADEAFRLLGHFDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 >gi|340625865|ref|YP_004744317.1| putative short-chain type dehydrogenase/reductase [Mycobacterium canettii CIPT 140010059] gi|340004055|emb|CCC43191.1| putative short-chain type dehydrogenase/reductase [Mycobacterium canettii CIPT 140010059] Length=275 Score = 543 bits (1399), Expect = 1e-152, Method: Compositional matrix adjust. Identities = 272/275 (99%), Positives = 273/275 (99%), Gaps = 0/275 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVH V Sbjct 1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH Sbjct 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG Sbjct 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 VSVLCPMVV TNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN Sbjct 181 VSVLCPMVVGTNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILAN 240 Query 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH Sbjct 241 RLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 >gi|296169511|ref|ZP_06851131.1| short-chain dehydrogenase/reductase family oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895777|gb|EFG75472.1| short-chain dehydrogenase/reductase family oxidoreductase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=276 Score = 443 bits (1140), Expect = 1e-122, Method: Compositional matrix adjust. Identities = 219/276 (80%), Positives = 241/276 (88%), Gaps = 1/276 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGF GRG V+TGGASGIGLAT TEFARRGARVVL DVD+PGL QAVNHLRA+GFD H V Sbjct 1 MDGFEGRGTVVTGGASGIGLATATEFARRGARVVLSDVDQPGLEQAVNHLRAQGFDAHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 +CDVRH E+ HLA E+FRLLG VDVVFSNAGIVV GPI +MTHDDWRWV+D+DLWG+IH Sbjct 61 VCDVRHLHEMVHLAKESFRLLGRVDVVFSNAGIVVAGPIAQMTHDDWRWVVDIDLWGNIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 VEAFLPRL EQGTGGH+ FTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREV DGIG Sbjct 121 AVEAFLPRLREQGTGGHLAFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVKEDGIG 180 Query 181 VSVLCPMVVETNLVANSERIRGAACA-QSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 VSVLCPMVVET LV+NSERIRGA SS + G LP QD+ +GV+D+A+LTADAILA Sbjct 181 VSVLCPMVVETKLVSNSERIRGADYGLTSSPKAADGTLPTQDEGVGVEDVARLTADAILA 240 Query 240 NRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 NRLYVLPH A+RASIRRRFERID+TF +QAAEGW H Sbjct 241 NRLYVLPHEAARASIRRRFERIDQTFADQAAEGWSH 276 >gi|345111070|pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis gi|345111071|pdb|3TJR|B Chain B, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length=301 Score = 442 bits (1136), Expect = 4e-122, Method: Compositional matrix adjust. Identities = 217/276 (79%), Positives = 240/276 (87%), Gaps = 1/276 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + GF GR AV+TGGASGIGLAT TEFARRGAR+VL DVD+P L QAVN LR +GFD H V Sbjct 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 85 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 +CDVRH +E+ LADEAFRLLG VDVVFSNAGIVV GP+ +M HDDWRWVID+DLWGSIH Sbjct 86 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 145 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 VEAFLPRLLEQGTGGH+ FTASFAGLVPNAGLG YGVAKYGVVGLAETLAREV +GIG Sbjct 146 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 205 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSST-TGSPGPLPLQDDNLGVDDIAQLTADAILA 239 VSVLCPMVVET LV+NSERIRGA S+T G+ GPLP QD+++ DD+A+LTADAILA Sbjct 206 VSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA 265 Query 240 NRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 NRLY+LPHAA+R SIRRRFERIDRTFDEQAAEGW H Sbjct 266 NRLYILPHAAARESIRRRFERIDRTFDEQAAEGWTH 301 >gi|41406808|ref|NP_959644.1| short chain dehydrogenase [Mycobacterium avium subsp. paratuberculosis K-10] gi|118465477|ref|YP_880159.1| short chain dehydrogenase [Mycobacterium avium 104] gi|254773786|ref|ZP_05215302.1| short chain dehydrogenase [Mycobacterium avium subsp. avium ATCC 25291] gi|41395158|gb|AAS03027.1| hypothetical protein MAP_0710c [Mycobacterium avium subsp. paratuberculosis K-10] gi|118166764|gb|ABK67661.1| short chain dehydrogenase [Mycobacterium avium 104] gi|336461157|gb|EGO40035.1| short-chain alcohol dehydrogenase [Mycobacterium avium subsp. paratuberculosis S397] Length=280 Score = 441 bits (1133), Expect = 8e-122, Method: Compositional matrix adjust. Identities = 217/276 (79%), Positives = 240/276 (87%), Gaps = 1/276 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + GF GR AV+TGGASGIGLAT TEFARRGAR+VL DVD+P L QAVN LR +GFD H V Sbjct 5 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGV 64 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 +CDVRH +E+ LADEAFRLLG VDVVFSNAGIVV GP+ +M HDDWRWVID+DLWGSIH Sbjct 65 VCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIH 124 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 VEAFLPRLLEQGTGGH+ FTASFAGLVPNAGLG YGVAKYGVVGLAETLAREV +GIG Sbjct 125 AVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIG 184 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSST-TGSPGPLPLQDDNLGVDDIAQLTADAILA 239 VSVLCPMVVET LV+NSERIRGA S+T G+ GPLP QD+++ DD+A+LTADAILA Sbjct 185 VSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAILA 244 Query 240 NRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 NRLY+LPHAA+R SIRRRFERIDRTFDEQAAEGW H Sbjct 245 NRLYILPHAAARESIRRRFERIDRTFDEQAAEGWTH 280 >gi|183984723|ref|YP_001853014.1| short-chain type dehydrogenase/reductase [Mycobacterium marinum M] gi|183178049|gb|ACC43159.1| short-chain type dehydrogenase/reductase [Mycobacterium marinum M] Length=276 Score = 430 bits (1105), Expect = 1e-118, Method: Compositional matrix adjust. Identities = 214/278 (77%), Positives = 237/278 (86%), Gaps = 5/278 (1%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGF GRGAVITGGASGIGLAT TEFARRGA+VVL D+DKPGL ++V HLR +GFD H V Sbjct 1 MDGFAGRGAVITGGASGIGLATATEFARRGAKVVLADIDKPGLERSVEHLRGKGFDAHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRH EV HLA E+ RLLG +DVVFSNAGIVV GPI +MTHDDWRWVID+DLWGSIH Sbjct 61 MCDVRHLSEVNHLAAESARLLGQIDVVFSNAGIVVAGPIADMTHDDWRWVIDIDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLP+LLE GGH+ FTASFAGLVPNAGLGAYGVAKYGVVGLAETL+RE+ G+G Sbjct 121 TVEAFLPKLLEH--GGHIAFTASFAGLVPNAGLGAYGVAKYGVVGLAETLSREMKDRGVG 178 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSS---TTGSPGPLPLQDDNLGVDDIAQLTADAI 237 V+VLCPMVVET LV+NSERIRGA SS TG G LP QDD+L VD++A+LTADAI Sbjct 179 VTVLCPMVVETRLVSNSERIRGADYGLSSAPQVTGDMGSLPAQDDSLSVDELARLTADAI 238 Query 238 LANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 LANRLYVLPH +R SI+RRF RIDRTFDEQAAEGWRH Sbjct 239 LANRLYVLPHEGARTSIQRRFARIDRTFDEQAAEGWRH 276 >gi|240173184|ref|ZP_04751842.1| short chain dehydrogenase [Mycobacterium kansasii ATCC 12478] Length=279 Score = 427 bits (1097), Expect = 1e-117, Method: Compositional matrix adjust. Identities = 218/276 (79%), Positives = 233/276 (85%), Gaps = 5/276 (1%) Query 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMC 62 GF GRGAVITGGASGIGLAT TEFARRGA VVL DVD+PGL QAV HLRA GF+ H VMC Sbjct 6 GFAGRGAVITGGASGIGLATATEFARRGAAVVLADVDQPGLEQAVTHLRAGGFEAHGVMC 65 Query 63 DVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTV 122 DVRH EVTHLADEA RLL VD+VFSNAGIVV GPI +MTHDDWRWVID+DLWGSIH V Sbjct 66 DVRHLREVTHLADEASRLLDRVDIVFSNAGIVVAGPIADMTHDDWRWVIDIDLWGSIHAV 125 Query 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182 EAFLP LLE GGH+ FTASFAGLVPNAGLGAYGVAKYGVV LAETLAREV G+GVS Sbjct 126 EAFLPGLLEH--GGHIAFTASFAGLVPNAGLGAYGVAKYGVVSLAETLAREVKDRGVGVS 183 Query 183 VLCPMVVETNLVANSERIRGA---ACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 VLCPMVV+T LV+NSERIRGA A TG+ G LP QDD+L VDD+A+LTADAI A Sbjct 184 VLCPMVVDTKLVSNSERIRGADYGLSAAPDVTGTTGSLPAQDDSLTVDDVARLTADAIAA 243 Query 240 NRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 NRLYVLPH A+RASIRRRFERIDRTFD+QAAEGW H Sbjct 244 NRLYVLPHQAARASIRRRFERIDRTFDQQAAEGWCH 279 >gi|342860372|ref|ZP_08717023.1| short chain dehydrogenase [Mycobacterium colombiense CECT 3035] gi|342132027|gb|EGT85268.1| short chain dehydrogenase [Mycobacterium colombiense CECT 3035] Length=279 Score = 426 bits (1094), Expect = 3e-117, Method: Compositional matrix adjust. Identities = 211/279 (76%), Positives = 237/279 (85%), Gaps = 4/279 (1%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGF GRGAVITGGASGIGLAT TEFARRGARVVL DVD+ L +AV L+AEGFD H V Sbjct 1 MDGFEGRGAVITGGASGIGLATATEFARRGARVVLADVDESALERAVAQLKAEGFDAHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 CDVRH +++ HLADE+FRLLG VDVVFSNAGIVV GP+ MTH+DWRWVID+DLWGSIH Sbjct 61 TCDVRHLDQMVHLADESFRLLGQVDVVFSNAGIVVAGPLATMTHEDWRWVIDIDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 VEAF+P+L+EQG+GGH+ FTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREV +GIG Sbjct 121 AVEAFVPKLIEQGSGGHIAFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVRDNGIG 180 Query 181 VSVLCPMVVETNLVANSERIR----GAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADA 236 VSVLCPMV+ET LVANSERIR G A A T+G P QDD + VD +A+LTADA Sbjct 181 VSVLCPMVIETGLVANSERIRSADDGLASAPDLTSGFGQFPPTQDDTVSVDGVARLTADA 240 Query 237 ILANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 ILANRLY+LPH A+RAS++RRFERIDRTFDEQAAEGW H Sbjct 241 ILANRLYILPHEAARASVKRRFERIDRTFDEQAAEGWTH 279 >gi|118616193|ref|YP_904525.1| short chain dehydrogenase [Mycobacterium ulcerans Agy99] gi|118568303|gb|ABL03054.1| short-chain type dehydrogenase/reductase [Mycobacterium ulcerans Agy99] Length=276 Score = 422 bits (1084), Expect = 3e-116, Method: Compositional matrix adjust. Identities = 211/278 (76%), Positives = 234/278 (85%), Gaps = 5/278 (1%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 +DGF G GAVITGGASGIGLAT TEFARRGA+VVL D+DKPGL ++V HLR +GFD H V Sbjct 1 MDGFAGSGAVITGGASGIGLATATEFARRGAKVVLADIDKPGLERSVEHLRGKGFDAHGV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 MCDVRH EV HLA E+ RLLG +DVVFSNAGIVV GPI +MTHD WRWVID+DLWGSIH Sbjct 61 MCDVRHLSEVNHLAAESARLLGQIDVVFSNAGIVVAGPIADMTHDVWRWVIDIDLWGSIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 TVEAFLP+LLE GGH+ FTASFAGLVPNAGLGAYGVAKYGVVGLAETL+RE+ G+G Sbjct 121 TVEAFLPKLLEH--GGHIAFTASFAGLVPNAGLGAYGVAKYGVVGLAETLSREMKDRGVG 178 Query 181 VSVLCPMVVETNLVANSERIRGAACAQSS---TTGSPGPLPLQDDNLGVDDIAQLTADAI 237 V+VLCPMVVET LV+NSERIRGA SS TG G LP QDD+L VD++A+LTADAI Sbjct 179 VTVLCPMVVETQLVSNSERIRGADYGLSSAPQVTGDMGSLPAQDDSLSVDELARLTADAI 238 Query 238 LANRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 LAN LYVLPH +R SI+RRF RIDRTFDEQAAEGWRH Sbjct 239 LANGLYVLPHEGARTSIQRRFARIDRTFDEQAAEGWRH 276 >gi|254818647|ref|ZP_05223648.1| short chain dehydrogenase [Mycobacterium intracellulare ATCC 13950] Length=280 Score = 419 bits (1076), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 217/276 (79%), Positives = 241/276 (88%), Gaps = 1/276 (0%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + GF GRGAV+TGGASGIGLAT TEFA RGAR+VL DVD+P L QAVN LR EGFD H V Sbjct 5 LSGFDGRGAVVTGGASGIGLATATEFAHRGARLVLSDVDQPALEQAVNRLRGEGFDAHGV 64 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 +CDVR+ +E+ HLADEAFRLLG VDVVFSNAGIVV GPI +M HDDWRWVID+DLWGSIH Sbjct 65 VCDVRNLDEMVHLADEAFRLLGSVDVVFSNAGIVVAGPIGQMNHDDWRWVIDIDLWGSIH 124 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180 VEAF+PRL+EQG+GGH+ FTASFAGLVPNAGLG YGVAKYGVVGLAETLAREV A+GIG Sbjct 125 AVEAFVPRLIEQGSGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKANGIG 184 Query 181 VSVLCPMVVETNLVANSERIRGAACAQS-STTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 VSVLCPMVVET LV+NSERIRGA S S G+ G LP QD+++ DD+A+LTADAILA Sbjct 185 VSVLCPMVVETKLVSNSERIRGADYGLSASPEGAFGTLPTQDESVSADDVARLTADAILA 244 Query 240 NRLYVLPHAASRASIRRRFERIDRTFDEQAAEGWRH 275 NRLY+LPHAA+RASIRRRFERIDRTFDEQAAEGW H Sbjct 245 NRLYILPHAAARASIRRRFERIDRTFDEQAAEGWTH 280 >gi|149926904|ref|ZP_01915163.1| hypothetical protein LMED105_12922 [Limnobacter sp. MED105] gi|149824456|gb|EDM83674.1| hypothetical protein LMED105_12922 [Limnobacter sp. MED105] Length=279 Score = 179 bits (453), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 109/270 (41%), Positives = 145/270 (54%), Gaps = 10/270 (3%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 ++ F G+ AVITG ASGIGLA G +VL D+D+ L+ A L V ++ Sbjct 1 MNNFNGKTAVITGAASGIGLALAKHAGAMGMNLVLADIDEAALQAATEQLSLPADRVLAL 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DVRH E+ LAD A+ V ++F+NAG+ + E T DW W++ V+LW +H Sbjct 61 RTDVRHAAEIKALADAAYARFNGVHLLFNNAGVALARTTWEHTVADWEWILQVNLWSVVH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE--VTADG 178 + FLPR+ QG H+V TAS AGLV N G+ AY V+K+GVV L+ETL+ E +T Sbjct 121 GISEFLPRMQAQGGPAHIVNTASVAGLVSNPGMAAYNVSKHGVVTLSETLSLELQMTQSP 180 Query 179 IGVSVLCPMVVETNLVANSERIR-GAACAQSSTTGSPGPL------PLQDDNLGVDDIAQ 231 IGVS+LCP V T + NSER R G +S G L + L DD+A Sbjct 181 IGVSLLCPAWVPTG-IGNSERNRPGDVAHTNSIEGFSAQLNKRIGKAIASGQLTADDMAV 239 Query 232 LTADAILANRLYVLPHAASRASIRRRFERI 261 T AI R YV+PH I R + I Sbjct 240 ETFKAISEKRFYVIPHGYMFPVIETRMKEI 269 >gi|119475011|ref|ZP_01615364.1| short chain dehydrogenase [marine gamma proteobacterium HTCC2143] gi|119451214|gb|EAW32447.1| short chain dehydrogenase [marine gamma proteobacterium HTCC2143] Length=279 Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 103/270 (39%), Positives = 143/270 (53%), Gaps = 3/270 (1%) Query 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVR 65 GR A ITG ASGIG + FA RGA++++ D + L++A N LRA G DV SV+CDV Sbjct 6 GRVAFITGAASGIGYSLAKSFAARGAKIMMADRNAETLQRAENDLRATGADVASVVCDVT 65 Query 66 HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAF 125 + + A V +V +NAG+ +GG + +DWRWV+D+++ G H VE F Sbjct 66 SLDSMKAAAQATLDRFAKVHIVANNAGVPMGGKPGRIPMEDWRWVLDINVIGVAHGVEVF 125 Query 126 LPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLC 185 P L EQG GGH + TAS AGL+ AG+ Y +K+ VVG +E+L EV D IGVSVLC Sbjct 126 TPILREQGEGGHFLNTASMAGLMGQAGVAPYVASKFAVVGYSESLRDEVATDNIGVSVLC 185 Query 186 PMVVETNL---VANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRL 242 P V T + + + + + + G G L + + D IA D + ANR Sbjct 186 PGYVNTGIHSAMFDRPSLTTTSDESAKRKGYTGMEKLIKNGMDPDAIANWALDCVEANRF 245 Query 243 YVLPHAASRASIRRRFERIDRTFDEQAAEG 272 Y+ + R R I FD +G Sbjct 246 YIFTNPEIRKDYAERSSGILADFDALINDG 275 >gi|226314751|ref|YP_002774647.1| short chain dehydrogenase [Brevibacillus brevis NBRC 100599] gi|226097701|dbj|BAH46143.1| probable short chain dehydrogenase [Brevibacillus brevis NBRC 100599] Length=285 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 101/272 (38%), Positives = 153/272 (57%), Gaps = 12/272 (4%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 ++ F + AVITG ASGIG A A +VVL DV+ L++ L++ G V +V Sbjct 1 MNQFENKVAVITGAASGIGRALAMRCAEEQMKVVLADVEVVELQRVEQELQSAGATVLAV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 + DV +++ LA + + G V ++F+NAG+ G I + T DW+WV++V+LWG+IH Sbjct 61 VTDVSKEKDIQTLAQKTLDMFGAVHLLFNNAGVGAGSTIWQSTLADWQWVMNVNLWGAIH 120 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT--ADG 178 + F+P +L+QGT H+V TAS AGL G Y V+K+ +V L+ETL E+ Sbjct 121 ATQIFVPMMLKQGTECHIVNTASLAGLESGPGNSIYRVSKHALVSLSETLYHELKMIQSK 180 Query 179 IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNL---GVD------DI 229 IGVSVLCP V+T + ++ R R A ++ P P+ D GV+ ++ Sbjct 181 IGVSVLCPGFVQTQ-ICDAHRNRPAEYSKPGDIVEPSPMSSAIDQFIRSGVEQGISPKEV 239 Query 230 AQLTADAILANRLYVLPHAASRASIRRRFERI 261 A T AI +NR Y+LP + + +R+R E I Sbjct 240 ADHTFLAIKSNRFYILPDPSYKEPVRQRMEDI 271 >gi|302873888|ref|YP_003842521.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] gi|307689866|ref|ZP_07632312.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] gi|302576745|gb|ADL50757.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] Length=287 Score = 168 bits (426), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 91/256 (36%), Positives = 145/256 (57%), Gaps = 13/256 (5%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F G+ AVITGGA+GIG A E A+R ++V+ D+++ L++A L+A+G +V ++ D Sbjct 4 FKGKVAVITGGANGIGFAIAEECAKREIKIVIADINELDLKKAEEKLKAQGAEVLALQTD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V E++ LAD+ GHVD++F+NAG+VV GP ++ DW W++ V++WG IH + Sbjct 64 VIKYEDMERLADKTLERFGHVDLLFNNAGVVVAGPAWSLSLRDWEWIMKVNVWGIIHGEK 123 Query 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAET--LAREVTADGIGV 181 AF+P +L+Q T H++ TAS AGL+ G+ AY +K+ V L+E+ L + D I + Sbjct 124 AFIPIMLKQDTECHIINTASAAGLLSLDGMSAYHTSKFAAVALSESTYLDLQCVTDKIKM 183 Query 182 SVLCPMVVETNLVANSERIRGAAC----------AQSSTTGSPGPLPLQDDNLGVDDIAQ 231 SV CP ++T+L N ER R + S + + + VD + Sbjct 184 SVFCPGFIQTDL-NNCERHRPKDYDNDMEDEYYHSDSYKAKEEQKHKVIQNGIPVDMVGA 242 Query 232 LTADAILANRLYVLPH 247 +AI + Y+L H Sbjct 243 TIFEAIEEEKFYILTH 258 >gi|94310784|ref|YP_583994.1| hypothetical protein Rmet_1846 [Cupriavidus metallidurans CH34] gi|93354636|gb|ABF08725.1| conserved hypothetical protein [Cupriavidus metallidurans CH34] Length=300 Score = 165 bits (418), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 109/276 (40%), Positives = 149/276 (54%), Gaps = 23/276 (8%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFDVHS 59 F + AVITGGASG G EFAR GA ++VL DV + L V +++G V Sbjct 4 FESKVAVITGGASGF----GKEFARIGASLGMKLVLADVQEDSLDSTVAEFKSQGAQVIG 59 Query 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 + DV EEV LAD A G V+++F+NAG+ GG I E T DW WV+ V+L+G + Sbjct 60 LRTDVSKAEEVQVLADAAMTAFGEVNLLFNNAGVGAGGLIWENTQKDWDWVLGVNLYGVV 119 Query 120 HTVEAFLPRLLEQ-----GTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREV 174 + V F P +LE G GH+V TAS AGL+ +G Y V+K+ VV L+ETL +++ Sbjct 120 NGVRIFTPLMLEAARKDPGYQGHIVNTASMAGLLNPPAMGVYNVSKHAVVALSETLYQDL 179 Query 175 T--ADGIGVSVLCPMVVETNLVANSERIRGAACA--QSSTTGSPGPLPLQDD-----NLG 225 + D + SVLCP V T ++ S+R R A A Q T L D + Sbjct 180 SLVTDQVHCSVLCPFYVPTG-ISQSQRNRPANMANDQPPTRSQMVSQALSDKAVNSGKVS 238 Query 226 VDDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 D+AQ+T DAI + Y+ H S S++RR E I Sbjct 239 AADVAQMTFDAIREDGFYIYSHPQSLDSVQRRMEEI 274 >gi|302873360|ref|YP_003841993.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] gi|307688470|ref|ZP_07630916.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] gi|302576217|gb|ADL50229.1| short-chain dehydrogenase/reductase SDR [Clostridium cellulovorans 743B] Length=281 Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 97/269 (37%), Positives = 143/269 (54%), Gaps = 12/269 (4%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F + A+ITG ASGIG A A G +VVL D+D+ LR +++ G + SV CD Sbjct 4 FKDKVAIITGAASGIGSAIAERCAYEGMKVVLADIDEGALRNTEKVIKSIGVETLSVRCD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V ++ LA++ G V ++F+NAG+ G + E T DW+WV+ V+LWG I++ + Sbjct 64 VSKENDIRVLAEKTLEAFGEVCLLFNNAGVATGTLLWENTTADWQWVLGVNLWGLINSTK 123 Query 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADG--IGV 181 F+P +L+Q H+V AS AG G G Y V+K+ +V +ETL E+ I V Sbjct 124 TFVPIMLKQNKECHIVNVASIAGFTACPGNGIYSVSKHAIVNFSETLYYEMKLANAPIDV 183 Query 182 SVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNL---GV------DDIAQL 232 SV+CP V T L+ NSER R + S + S GP + + GV + + + Sbjct 184 SVVCPGFVNTQLM-NSERNRPSDLMNSLDSTSYGPQKQMFEKIFHDGVLSGISPEQVVEE 242 Query 233 TADAILANRLYVLPHAASRASIRRRFERI 261 AI + Y+L H S+ IR+R E I Sbjct 243 IFQAIPNKKFYILTHKESKDLIRKRMEDI 271 >gi|186475803|ref|YP_001857273.1| hypothetical protein Bphy_1038 [Burkholderia phymatum STM815] gi|184192262|gb|ACC70227.1| short-chain dehydrogenase/reductase SDR [Burkholderia phymatum STM815] Length=289 Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 106/268 (40%), Positives = 147/268 (55%), Gaps = 10/268 (3%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F G+ AVITG SG G A + A G ++VL DVD+ L + V+ LRA G +V V D Sbjct 4 FDGKVAVITGAGSGFGRAFAEKGASLGMKLVLADVDEGALARTVDTLRAAGAEVIGVRTD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V + +V LAD A G V ++F+NAG+ GG + E + +DW WV V++ G H V Sbjct 64 VSNGAQVQALADAALEAFGKVHLLFNNAGVGAGGFLWESSANDWAWVFGVNVMGVAHGVR 123 Query 124 AFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADG--IGV 181 F P +L Q H+V TAS AGL+ +G Y +K+ VV L ETL ++ G +G Sbjct 124 VFAPIMLGQNEAAHIVNTASVAGLLSPPSMGIYNASKHAVVSLTETLYHDLRNAGGEVGC 183 Query 182 SVLCPMVVETNLVANSERIRGAAC---AQSSTTGSPGPLPLQ----DDNLGVDDIAQLTA 234 S+LCP V T +A++ER+R A AQ + + LQ LG D+A LT Sbjct 184 SLLCPAFVPTG-IADAERVRPEALRNEAQPTRSQLAADRQLQRAVRSGKLGATDVATLTF 242 Query 235 DAILANRLYVLPHAASRASIRRRFERID 262 +AI R Y+L H A A++R R E I+ Sbjct 243 EAIAERRFYILTHPAILATVRLRHEDIE 270 >gi|152982854|ref|YP_001353681.1| hypothetical protein mma_1991 [Janthinobacterium sp. Marseille] gi|151282931|gb|ABR91341.1| short-chain dehydrogenase/reductase SDR [Janthinobacterium sp. Marseille] Length=301 Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 108/276 (40%), Positives = 147/276 (54%), Gaps = 23/276 (8%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFDVHS 59 F GR AVITG ASG G EFA++GA ++VL DV + L + L A+G +V + Sbjct 4 FKGRVAVITGAASGF----GREFAQQGAGLGLKLVLADVQQDALDRVAAELGAQGAEVLA 59 Query 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 V CDV E+V LAD A + G V ++F+NAG+ GG + E T DW WV+ V+L+G I Sbjct 60 VCCDVSKAEQVQALADAAMQRFGAVHLLFNNAGVGSGGLVWENTASDWDWVLGVNLFGVI 119 Query 120 HTVEAFLPRLL-----EQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAR-- 172 H V F P +L + G GH+V TAS AGL +G Y V+K+ VV L ETL + Sbjct 120 HGVRIFTPLMLACAKDDPGYEGHIVNTASVAGLQNAPTMGIYNVSKHAVVSLTETLYQDL 179 Query 173 EVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSS--TTGSPGPLPLQDD-----NLG 225 ++ IG S+LCP V T + SER R A + TT + + Sbjct 180 QLIEAPIGTSLLCPYFVPTG-IHQSERNRPAEMQNDAAPTTSQKAAQAFSEKAVVSGKIS 238 Query 226 VDDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 +AQLT DAI +R Y+ AS+R+R E + Sbjct 239 AAQVAQLTFDAIREDRFYIYSDLEPLASVRQRMEDL 274 >gi|340788992|ref|YP_004754457.1| short-chain dehydrogenase/reductase SDR [Collimonas fungivorans Ter331] gi|340554259|gb|AEK63634.1| short-chain dehydrogenase/reductase SDR [Collimonas fungivorans Ter331] Length=296 Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 98/275 (36%), Positives = 139/275 (51%), Gaps = 22/275 (8%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + G+ AVITG A GIG A G ++VL D++ L V +A G +V V Sbjct 18 MKNLQGKVAVITGAAEGIGKGIAARAAAEGMKLVLADINAAKLETTVAGFKAMGVEVIGV 77 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DV E++ LAD+AF G+V ++ +NAG+ V P E + DW WV+ V+ +G H Sbjct 78 PTDVAREEQINALADQAFARFGNVHLLVNNAGVAVAKPAWETSQKDWDWVMGVNFYGVSH 137 Query 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT--ADG 178 + AF+PR+LE G GH+V TAS AGL L +Y +K+ VV L+E L ++T Sbjct 138 ALRAFIPRMLENGEEGHIVNTASMAGLTSQPSLASYNASKHAVVTLSEGLHHDLTLRQSH 197 Query 179 IGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGP------------LPLQDDNLGV 226 I VSVLCP V+T + +SER R G GP L + + V Sbjct 198 IKVSVLCPGWVKTG-IGHSERNR-------ENGGDSGPTDAVALKVGMSVLNAVQNGIAV 249 Query 227 DDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 +A DAI A R Y+L H + +I R + + Sbjct 250 TQVADEVFDAIAAERFYILTHPEMKQAIEVRMQDV 284 >gi|334140696|ref|YP_004533898.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] gi|333938722|emb|CCA92080.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] Length=297 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 96/280 (35%), Positives = 143/280 (52%), Gaps = 13/280 (4%) Query 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVR 65 GR A ITGG SG+ L FA+ G R+ + D+ + L +A+ H V V+ D+ Sbjct 6 GRTAFITGGGSGVALGQAKVFAKAGCRIAIADIRQDHLDEAMAHFANTDATVMPVLLDIT 65 Query 66 HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAF 125 RE AD+ LG V+++F+ AG+ G I + THDDW W IDV+L G I+ + F Sbjct 66 DREAYRRAADDVEAELGPVELLFNTAGVSHFGAIQDATHDDWDWQIDVNLRGVINGIRTF 125 Query 126 LPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLC 185 +PR++E+G GGH+V TAS + V G G Y K V GL ETLA ++ GIGVS+LC Sbjct 126 VPRMVERGNGGHIVNTASMSAFVALKGTGIYCTTKMAVRGLTETLALDLDGTGIGVSLLC 185 Query 186 PMVVETN----LVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANR 241 P V TN L+ + + Q+ + + + + +AQ + ++ Sbjct 186 PGAVNTNIHEALLTRPKHLAETGYYQADPAMFEHLKKVIEIGMEPETLAQHVLKGVQEDQ 245 Query 242 LYVLPHAASRASIRRRFERI---------DRTFDEQAAEG 272 LY+LP+A R ++ R+ D FD + A G Sbjct 246 LYILPYAEFRGALEDIHARVMSALARPEDDPDFDRRVARG 285 >gi|160898804|ref|YP_001564386.1| hypothetical protein Daci_3363 [Delftia acidovorans SPH-1] gi|160364388|gb|ABX36001.1| short-chain dehydrogenase/reductase SDR [Delftia acidovorans SPH-1] Length=301 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/274 (37%), Positives = 141/274 (52%), Gaps = 14/274 (5%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + F G+ AV+TG SG GL A+ G +VL DV + L +A +G V + Sbjct 2 IKNFKGKTAVLTGAGSGFGLECARIGAKLGMNLVLVDVQQEALDRAAAEFEGQGVRVLAR 61 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DV ++ LADE + G VF+NAG+ GG + E T +DW+WV+ V+LWG IH Sbjct 62 RVDVSDAAQMQALADEVRQQFGAPHFVFNNAGVGAGGLVWENTLEDWQWVLGVNLWGVIH 121 Query 121 TVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE-- 173 V F P +LE GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ Sbjct 122 GVRLFTPMMLEAAKADPSFEGHIVNTASMAGLLAPPNMGIYNVSKHAVVSLTETLYQDLA 181 Query 174 VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSP------GPLPLQDDNLGVD 227 + +D I SVLCP V T +++SER R + A T S + + Sbjct 182 LVSDQISASVLCPFFVPTG-ISHSERNRPSHLAAQPLTASQKIGQAMSEKAVGSGKVTAT 240 Query 228 DIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 D+AQ DAI AN+ Y+ H + S++ R E + Sbjct 241 DVAQKVFDAIAANQFYIYSHPQALGSVQTRMEDV 274 >gi|333915021|ref|YP_004488753.1| short-chain dehydrogenase/reductase SDR [Delftia sp. Cs1-4] gi|333745221|gb|AEF90398.1| short-chain dehydrogenase/reductase SDR [Delftia sp. Cs1-4] Length=301 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/274 (37%), Positives = 141/274 (52%), Gaps = 14/274 (5%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + F G+ AV+TG SG GL A+ G +VL DV + L +A +G V + Sbjct 2 IKNFKGKTAVLTGAGSGFGLECARIGAKLGMNLVLVDVQQEALDRAAAEFEGQGVRVLAR 61 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DV ++ LADE + G VF+NAG+ GG + E T +DW+WV+ V+LWG IH Sbjct 62 RVDVSDAAQMQALADEVRQQFGAPHFVFNNAGVGAGGLVWENTLEDWQWVLGVNLWGVIH 121 Query 121 TVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE-- 173 V F P +LE GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ Sbjct 122 GVRLFTPMMLEAAKADPSFEGHIVNTASMAGLLAPPNMGIYNVSKHAVVSLTETLYQDLA 181 Query 174 VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSP------GPLPLQDDNLGVD 227 + +D I SVLCP V T +++SER R + A T S + + Sbjct 182 LVSDQISASVLCPFFVPTG-ISHSERNRPSHLAAQPLTASQKIGQAMSEKAVGSGKVTAP 240 Query 228 DIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 D+AQ DAI AN+ Y+ H + S++ R E + Sbjct 241 DVAQKVFDAIAANQFYIYSHPQALGSVQTRMEDV 274 >gi|338974473|ref|ZP_08629833.1| short-chain dehydrogenase/reductase [Bradyrhizobiaceae bacterium SG-6C] gi|338232346|gb|EGP07476.1| short-chain dehydrogenase/reductase [Bradyrhizobiaceae bacterium SG-6C] Length=249 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 99/247 (41%), Positives = 130/247 (53%), Gaps = 9/247 (3%) Query 32 RVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHREEVTHLADEAFRLLGHVDVVFSNA 91 +V+L DV+ L AVN L G V + CDV V A F G+V +V +NA Sbjct 2 KVMLADVEADALAAAVNSLHNVGPGVRGIDCDVADAAGVERAAKATFDAFGNVHIVCNNA 61 Query 92 GIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNA 151 G+ GG I E+ D WRWVIDV+L G +H + AFLP + G GGH+V TAS AG+ Sbjct 62 GVAAGGGIDEIALDSWRWVIDVNLMGVVHGIRAFLPHMRAHGEGGHIVNTASMAGMQSGL 121 Query 152 GLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIR----GAACAQ 207 G Y +K+ VVG++E LA ++ GIGVSVLCP V T + S R R GAA Sbjct 122 GFSPYTASKFAVVGMSEGLAPQLAPFGIGVSVLCPGFVRTR-IGESGRNRPDQYGAAQVP 180 Query 208 SSTTGSPGPLPLQDDNL--GVD--DIAQLTADAILANRLYVLPHAASRASIRRRFERIDR 263 + + + + D+ + G+D D+A AI AN LYV H R + RF I Sbjct 181 EPGSATAMLVAMVDEMIGNGIDPADVAARVLAAIRANELYVFTHPEMRTEVENRFTAITT 240 Query 264 TFDEQAA 270 FD AA Sbjct 241 AFDRAAA 247 >gi|73541109|ref|YP_295629.1| hypothetical protein Reut_A1415 [Ralstonia eutropha JMP134] gi|72118522|gb|AAZ60785.1| Short-chain dehydrogenase/reductase SDR [Ralstonia eutropha JMP134] Length=300 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/279 (38%), Positives = 147/279 (53%), Gaps = 23/279 (8%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFD 56 ++ F GR AVITGGASG G EFAR GA ++VL DV + L V LR +G D Sbjct 1 MNQFEGRVAVITGGASGF----GKEFARIGAGLDMKLVLADVQQDALDATVAELRGQGAD 56 Query 57 VHSVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLW 116 V + DV E+V LAD A G V+++F+NAG+ GG + E + DW WV+ V+L+ Sbjct 57 VIGLRTDVSRGEQVQALADAAMERFGQVNLLFNNAGVGAGGLLWENSLKDWEWVLGVNLY 116 Query 117 GSIHTVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLA 171 G +H V F P +L H+V TAS AG++ +G Y V+K+ VV L ETL Sbjct 117 GVVHGVRIFTPLMLAAAAKDPTYQAHIVNTASMAGMLSPPAMGVYNVSKHAVVTLTETLY 176 Query 172 RE--VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSS--TTGSPGPLPLQDD----- 222 ++ + + + SVLCP V T + S+R R A + T L D Sbjct 177 QDLGLVTEQVRCSVLCPYFVPTG-INQSQRNRPADLTNDAPPTRSQMVSQALTDKAVTSG 235 Query 223 NLGVDDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 + +D+AQ T DAI A Y+ H + A +++RFE I Sbjct 236 KVTAEDVAQKTFDAIRAESFYIYSHPQALAPVQQRFEDI 274 >gi|170692437|ref|ZP_02883600.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] gi|170142867|gb|EDT11032.1| short-chain dehydrogenase/reductase SDR [Burkholderia graminis C4D1M] Length=297 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 105/283 (38%), Positives = 148/283 (53%), Gaps = 26/283 (9%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFDVHS 59 FP R AVITG ASG G A FA+R A ++VL DV+ L Q V+ LRA G D Sbjct 4 FPARVAVITGAASGFGQA----FAQRAAALRMKLVLADVNPEALAQTVDALRAAGADAIG 59 Query 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 V DV + +V LA A G V ++F+NAG+ GG + E + +DW WV V++ G Sbjct 60 VPTDVSNAAQVEALAQAALDAFGKVHLLFNNAGVGSGGFLWESSANDWAWVFGVNVMGVA 119 Query 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETL--------- 170 H V AF P +L Q H+V TAS AGL+ +G Y +K+ VV L ETL Sbjct 120 HGVRAFAPLMLAQNEPAHIVNTASVAGLLSPPAMGVYNASKHAVVSLTETLYHDLQLAQA 179 Query 171 AREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSST-------TGSPGPLPLQDDN 223 R+ A +G S+LCP T +A++ER+R A ++ G ++ Sbjct 180 GRDANAQ-VGCSLLCPAFAPTG-IADAERMRPADLRNENSPTRSQIAAGKQLQRAVRAGK 237 Query 224 LGVDDIAQLTADAILANRLYVLPHAASRASIRRRFERIDRTFD 266 L ++A LT DA+ A R Y++ H A A+++ R E I++ D Sbjct 238 LSAAEVAALTFDAVAARRFYIITHPAIMATVKLRHEDIEQLRD 280 >gi|344174716|emb|CCA86526.1| putative oxidoreductase dehydrogenase [Ralstonia syzygii R24] Length=300 Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 106/276 (39%), Positives = 146/276 (53%), Gaps = 23/276 (8%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGA----RVVLGDVDKPGLRQAVNHLRAEGFDVHS 59 F G AVITGGASG G EFAR GA ++VL D+ + L AV +A+G +V Sbjct 4 FAGGVAVITGGASGF----GKEFARLGAGLGMKLVLADIQQDALDAAVAGFQAQGVEVIG 59 Query 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 V DV +V LAD A R G V+++F+NAG+ GG I E T DW WV+ V+L G I Sbjct 60 VRVDVSREADVQALADAAIRAFGKVNLLFNNAGVGAGGLIWENTQKDWDWVLGVNLHGVI 119 Query 120 HTVEAFLPRLLEQGT-----GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREV 174 H V F P +L + GH+V TAS AGL+ +G Y V+K+ VV L E+L +++ Sbjct 120 HGVRIFTPLMLAEAARDPSYEGHIVNTASMAGLLNAPAMGIYNVSKHAVVALTESLYQDL 179 Query 175 T--ADGIGVSVLCPMVVETNLVANSERIRGAACAQSS--TTGSPGPLPLQDD-----NLG 225 + + I SVLCP V T + S R R A ++ T + D + Sbjct 180 SLVTEQIHCSVLCPYFVPTG-ITQSHRNRPQDLANTAPPTKSQLVAQAMTDKAVSSGKVT 238 Query 226 VDDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 + + Q+T DAIL R Y+ H + A ++ RFE I Sbjct 239 AEQVGQMTFDAILGERFYIYSHPHALAPVQHRFEDI 274 >gi|108761191|ref|YP_628648.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus xanthus DK 1622] gi|108465071|gb|ABF90256.1| oxidoreductase, short chain dehydrogenase/reductase family [Myxococcus xanthus DK 1622] Length=275 Score = 155 bits (393), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 94/249 (38%), Positives = 139/249 (56%), Gaps = 8/249 (3%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AVITG SG+G A E ARR ARV++ D++ + + G + H +CDV Sbjct 9 AVITGAGSGLGRALCEELARRRARVLVTDINAASAEETALRVTRAGGEAHVHVCDVTEPA 68 Query 69 EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPR 128 +V +AD A + LG VD++ +NAG+V GP+ E++ +W+ V+D++LWG IH F+PR Sbjct 69 QVEAMADAAEQALGGVDLLVNNAGVVSAGPVGELSLSEWKRVLDINLWGVIHGCHVFVPR 128 Query 129 LLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMV 188 + QG+ GH++ AS AGLV L AY V+K GV+ L+ETL E+ A GIGV+V CP Sbjct 129 MRRQGS-GHILNIASAAGLVYVPDLAAYNVSKAGVIALSETLHAELKATGIGVTVACPSF 187 Query 189 VETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHA 248 T + + + T + L L + LG + +A+ A+ A LY +P A Sbjct 188 FRTRIASTGHYTK-------DTLRTLAGLMLDEARLGPEVVARRLLKAVDARSLYTVPMA 240 Query 249 ASRASIRRR 257 +R R R Sbjct 241 DARWGWRLR 249 >gi|326317178|ref|YP_004234850.1| short-chain dehydrogenase/reductase SDR [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374014|gb|ADX46283.1| short-chain dehydrogenase/reductase SDR [Acidovorax avenae subsp. avenae ATCC 19860] Length=305 Score = 155 bits (392), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 103/273 (38%), Positives = 141/273 (52%), Gaps = 13/273 (4%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 ++ F G+ AV+TG SG GL ARRG R+VL DV + L QA +RA G DV + Sbjct 2 IEDFQGKTAVLTGAGSGFGLECARIGARRGMRLVLVDVQQDALDQAEAEVRAAGADVLAR 61 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DV ++ LA + G VF+NAG+ GG + E T DW WV+ V+L G +H Sbjct 62 RVDVSDAGQMERLASDVRERFGAPHFVFNNAGVGAGGLVWENTVADWNWVLGVNLMGVVH 121 Query 121 TVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE-- 173 V F P +L+ GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ Sbjct 122 GVRLFTPMMLDAARQDPAWRGHIVNTASMAGLLTPPNMGIYNVSKHAVVSLTETLYQDLA 181 Query 174 VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLG-----VDD 228 + D IG SVLCP V T + SER R A A T + D +G + Sbjct 182 LVTDQIGASVLCPYFVPTG-IGRSERNRPDAPAAPPTRSQLIGQAMNDKAVGSGKVTAAE 240 Query 229 IAQLTADAILANRLYVLPHAASRASIRRRFERI 261 +AQ+ D I ANR Y+ H + +++ R E I Sbjct 241 VAQIVFDGIAANRFYLFSHPQALGNVQSRMESI 273 >gi|17546488|ref|NP_519890.1| hypothetical protein RSc1769 [Ralstonia solanacearum GMI1000] gi|17428786|emb|CAD15471.1| probable oxidoreductase dehydrogenase signal peptide protein [Ralstonia solanacearum GMI1000] Length=300 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/271 (38%), Positives = 142/271 (53%), Gaps = 13/271 (4%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F G AVITGGASG G A A G ++VL D+ + L AV RA+G +V V D Sbjct 4 FAGGVAVITGGASGFGKAFARLGAGLGMKLVLADIQQDALDAAVAGFRAQGVEVIGVRVD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V +V LAD A R G V+++F+NAG+ GG I E + DW WV+ V+L G IH V Sbjct 64 VSREADVQALADAAIRTFGKVNLLFNNAGVGAGGLIWENSQQDWDWVLGVNLHGVIHGVR 123 Query 124 AFLPRLLEQGT-----GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT--A 176 F P +L + GH+V TAS AGL+ +G Y V+K+ VV L E+L ++++ Sbjct 124 IFTPLMLAEAAKDPSYAGHIVNTASMAGLLNAPAMGIYNVSKHAVVALTESLYQDLSLVT 183 Query 177 DGIGVSVLCPMVVETNLV-ANSERIRGAACAQSSTTGSPGPLPLQDD-----NLGVDDIA 230 + I SVLCP V T + ++ R + A A T + D + + + Sbjct 184 EQIRCSVLCPYFVPTGITQSHRNRPQDLANAAPPTRSQLVAQAMTDKAVSAGKVSAEQVG 243 Query 231 QLTADAILANRLYVLPHAASRASIRRRFERI 261 Q+T DAI R Y+ H + A ++ RFE I Sbjct 244 QMTFDAIRDERFYIYSHPHALAPVQHRFEDI 274 >gi|329912396|ref|ZP_08275744.1| Hypothetical Protein IMCC9480_775 [Oxalobacteraceae bacterium IMCC9480] gi|327545627|gb|EGF30787.1| Hypothetical Protein IMCC9480_775 [Oxalobacteraceae bacterium IMCC9480] Length=302 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 101/275 (37%), Positives = 141/275 (52%), Gaps = 15/275 (5%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 + F R AVITGGASG G AR G ++VL DV + L L A G +V +V Sbjct 1 MKNFTNRVAVITGGASGFGREFALIGARLGMKLVLADVQQDALDSVKAELEALGAEVLAV 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 CDVRH +++ LAD G V ++F+NAG+ GG + E T DW WV+ V+LWG IH Sbjct 61 RCDVRHADQIQALADATMARFGAVHLLFNNAGVGSGGLVWENTQADWEWVLGVNLWGVIH 120 Query 121 TVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE-- 173 V F P +LE GH+V TAS AGL+ +G Y V+K+ VV L E+L ++ Sbjct 121 GVRIFTPLMLECAKTDPEYEGHIVNTASMAGLLNAPTMGVYNVSKHAVVSLTESLYQDLR 180 Query 174 VTADGIGVSVLCPMVVETNLVANSERIR--GAACAQSSTTGSPGPLPLQDD-----NLGV 226 + I SVLCP V T ++ S R R A A T + D + Sbjct 181 LVEAPISASVLCPYFVPTG-ISQSHRNRPDDVANAARPTISQLAAQAMSDKAVSSGKVSA 239 Query 227 DDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 +A++T AI +++ YV H + +++R E I Sbjct 240 AAVAEMTFAAIGSDQFYVYSHPQALGHVQKRMEEI 274 >gi|254448095|ref|ZP_05061558.1| oxidoreductase, short chain dehydrogenase/reductase family [gamma proteobacterium HTCC5015] gi|198262221|gb|EDY86503.1| oxidoreductase, short chain dehydrogenase/reductase family [gamma proteobacterium HTCC5015] Length=278 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 89/250 (36%), Positives = 132/250 (53%), Gaps = 21/250 (8%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AV+TG SGIG + E A R ++VV D++ + +R G ++V CDV + E Sbjct 18 AVVTGAGSGIGRSFAMELASRQSQVVCSDINLAAAEETAERIRKAGGKAYAVRCDVGNAE 77 Query 69 EVTHLADEAFRLLGH-VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127 EV LADEA LLGH V +V +NAG+ +GG EM+ DDW W ++++LWG IH F+P Sbjct 78 EVAQLADEAEALLGHPVSLVINNAGVGIGGKFDEMSLDDWHWCMNINLWGVIHGCHHFVP 137 Query 128 RLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM 187 R QG G ++ AS A + Y V K GV+ L+ETL+ E+ + I V+VLCP Sbjct 138 RFKRQGHGA-IINVASAASYTAAPEMSVYNVTKAGVLALSETLSSELKKNNIKVNVLCPT 196 Query 188 VVETNLVAN------SERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANR 241 +V TN++ + ++ A S T S + +A+LT D + + Sbjct 197 LVPTNIIKSGRLPGRYSKLADHALMNYSMTTS-------------EAVAKLTLDRLDKGQ 243 Query 242 LYVLPHAASR 251 LY P ++ Sbjct 244 LYTTPQVDAK 253 >gi|338531018|ref|YP_004664352.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus fulvus HW-1] gi|337257114|gb|AEI63274.1| short chain dehydrogenase/reductase family oxidoreductase [Myxococcus fulvus HW-1] Length=275 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 100/258 (39%), Positives = 140/258 (55%), Gaps = 18/258 (6%) Query 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDV 64 P AV+TG SG+G A ARR ARV++ D+ + + EG + H +CDV Sbjct 5 PRPRAVVTGAGSGLGRALCEALARRRARVLVADIHAASAEETALRVTREGGEAHVQVCDV 64 Query 65 RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEA 124 +V LAD A R LG VD++ +NAG+V GP+ ++ +W+ V+D++LWG IH Sbjct 65 TDPAQVEALADAAERTLGGVDLLVNNAGVVSAGPVGTLSLAEWKRVLDINLWGVIHGCHV 124 Query 125 FLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVL 184 F+PR+ QG+ GH++ AS AGLV L AY V+K GVV L+ETL E+ GIGV+V Sbjct 125 FVPRMRRQGS-GHILNIASAAGLVYVPDLAAYNVSKAGVVALSETLHAELKPRGIGVTVA 183 Query 185 CPMVVETNLVANS-----ERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 CP TN +AN+ E +R A + T +G D IA+ A+ A Sbjct 184 CPSFFRTN-IANAGRYADETLRTLAVQMTGTA-----------RIGPDVIARKLLKAVDA 231 Query 240 NRLYVLPHAASRASIRRR 257 LY +P A +R R R Sbjct 232 RSLYSVPMADARWGWRMR 249 >gi|338533004|ref|YP_004666338.1| short chain dehydrogenase [Myxococcus fulvus HW-1] gi|337259100|gb|AEI65260.1| short chain dehydrogenase [Myxococcus fulvus HW-1] Length=274 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 95/247 (39%), Positives = 131/247 (54%), Gaps = 8/247 (3%) Query 11 ITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHREEV 70 ITGGASG+G A FAR G +V +GDV+ +A L A HS+ CDVR E++ Sbjct 8 ITGGASGLGKAIALRFARAGWKVCIGDVNDARGEEAQKELTALAPQAHSLRCDVRREEDL 67 Query 71 THLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLL 130 D G VDVV +NAG+ G I +++ DDW+W+ID++L G + + F P Sbjct 68 REALDWLTARWGGVDVVINNAGVAQAGAIEDVSIDDWQWIIDINLLGVVRGCKVFTPAFK 127 Query 131 EQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVE 190 +QG GH+V AS AGL+ + +Y K VV L+ETL E+ GIGVSV+CP + Sbjct 128 KQGH-GHIVNVASMAGLLDVPLMSSYNATKAAVVSLSETLHNELAEHGIGVSVVCPSFFK 186 Query 191 TNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHAAS 250 TNL +S R G+ L+ + DDIA DA+ Y+LPHA Sbjct 187 TNL-GDSLR------TTDPRLGATMARLLERSAITADDIANDVFDAVAERGFYILPHADG 239 Query 251 RASIRRR 257 R + R + Sbjct 240 RRAWRMK 246 >gi|120611532|ref|YP_971210.1| hypothetical protein Aave_2868 [Acidovorax citrulli AAC00-1] gi|120589996|gb|ABM33436.1| short-chain dehydrogenase/reductase SDR [Acidovorax citrulli AAC00-1] Length=301 Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 102/273 (38%), Positives = 141/273 (52%), Gaps = 13/273 (4%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 ++ F G+ AV+TG SG GL ARRG R+VL DV + L QA +RA G DV + Sbjct 2 IEDFQGKTAVLTGAGSGFGLECARIGARRGMRLVLVDVQQDALDQAEAEVRAAGADVLAR 61 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIH 120 DV ++ LA + G VF+NAG+ GG + E T DW WV+ V+L G +H Sbjct 62 RVDVADAGQMERLASDVRDRFGAPHFVFNNAGVGAGGLVWENTVADWNWVLGVNLMGVVH 121 Query 121 TVEAFLPRLLEQGTG-----GHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE-- 173 V F P +L+ GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ Sbjct 122 GVRLFTPMMLDAARQDPAWRGHIVNTASMAGLLTPPNMGIYNVSKHAVVSLTETLYQDLA 181 Query 174 VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLG-----VDD 228 + D +G SVLCP V T + SER R A A T + D +G + Sbjct 182 LVTDQVGASVLCPYFVPTG-IGRSERNRPDAVAAPPTRSQLIGQAMTDKAVGSGKVTAAE 240 Query 229 IAQLTADAILANRLYVLPHAASRASIRRRFERI 261 +AQ+ D I ANR Y+ H + +++ R E I Sbjct 241 VAQMVFDGISANRFYLFSHPQALGNVQSRMESI 273 >gi|194289585|ref|YP_002005492.1| hypothetical protein RALTA_A1476 [Cupriavidus taiwanensis LMG 19424] gi|193223420|emb|CAQ69425.1| putative OXIDOREDUCTASE DEHYDROGENASE [Cupriavidus taiwanensis LMG 19424] Length=300 Score = 153 bits (386), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 103/276 (38%), Positives = 144/276 (53%), Gaps = 23/276 (8%) Query 4 FPGRGAVITGGASGIGLATGTEFAR----RGARVVLGDVDKPGLRQAVNHLRAEGFDVHS 59 F R AVITGGASG G EFAR G ++VL DV + L V +A V Sbjct 4 FSNRVAVITGGASGF----GKEFARIAADLGMKLVLADVQEDALDATVAEFQARNVPVIG 59 Query 60 VMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSI 119 + DV E+V LAD A G V+++F+NAG+ GG I E + DW WV+ V+L+G + Sbjct 60 LRTDVSRAEQVQALADAAIEAFGQVNLLFNNAGVGAGGLIWENSQQDWEWVLGVNLYGVV 119 Query 120 HTVEAFLPRLL-----EQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE- 173 H V F P +L + GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ Sbjct 120 HGVRIFTPLMLAAAEKDPAFQGHIVNTASMAGLLNPPAMGVYNVSKHAVVALTETLYQDL 179 Query 174 -VTADGIGVSVLCPMVVETNLVANSERIRGAACAQSS--TTGSPGPLPLQDDNLG----- 225 + + + SVLCP V T ++ S+R R A A + T L D +G Sbjct 180 GLVTEQVRCSVLCPYFVPTG-ISQSQRNRPAELANQAPPTRSQLVSQALSDKAVGAGKVT 238 Query 226 VDDIAQLTADAILANRLYVLPHAASRASIRRRFERI 261 ++A++T DAI Y+ H + A +R+RFE I Sbjct 239 AAEVARITFDAIRDESFYIYSHPQALAPVRQRFEDI 274 >gi|293608758|ref|ZP_06691061.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292829331|gb|EFF87693.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length=277 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 90/240 (38%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AV+TG SGIG + E A+RG VV D++ + V L EG ++ CDV + E Sbjct 17 AVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVKLLEQEGAKAFAMRCDVGNAE 76 Query 69 EVTHLADEAFRLLGH-VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127 +V HLA+ A LLGH V +V +NAG+ +GG E+T +DW WV++++LWG IH AF+P Sbjct 77 QVNHLAETAEILLGHPVTLVINNAGVGLGGKFDELTLEDWNWVMNINLWGVIHGCHAFVP 136 Query 128 RLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM 187 + + G G ++ AS A + AY V K GV L+ETL+ E+ I V+VLCP Sbjct 137 KFKKLGYGA-IINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELRKFNIKVNVLCPT 195 Query 188 VVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPH 247 +V TN++ N RI G + L DD+A+LT + + + +Y +P Sbjct 196 LVPTNIIKNG-RIPGRYSKLADHALMNYALTTS------DDVARLTLNRLDQDEMYTIPQ 248 >gi|50084885|ref|YP_046395.1| short-chain dehydrogenase [Acinetobacter sp. ADP1] gi|49530861|emb|CAG68573.1| putative short-chain dehydrogenase [Acinetobacter sp. ADP1] Length=275 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 88/243 (37%), Positives = 133/243 (55%), Gaps = 17/243 (6%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AV+TG SGIG + E ARRG VV D++ ++ V+ ++ G V CDV E Sbjct 17 AVVTGAGSGIGRSFALELARRGGTVVCSDINLDAAKETVSLIQELGAQAFPVQCDVAKAE 76 Query 69 EVTHLADEAFRLLGH-VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127 +V+ LA+ A +L+ + V +V +NAGI +GG EMT +DW+W +D++LWG IH AF+P Sbjct 77 QVSQLAEHAEKLMQNPVTLVINNAGIGLGGKFDEMTTEDWQWCLDINLWGVIHGCRAFVP 136 Query 128 RLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM 187 + + G G ++ AS A + Y V+K GV L+ETL+ E+ I V+VLCP Sbjct 137 KFKQLGHGA-IINVASAASFTAAPEMTVYNVSKAGVRALSETLSAELKKFDIKVNVLCPT 195 Query 188 VVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGV---DDIAQLTADAILANRLYV 244 +V TN++ N + G L +NL D +A+LT D + ++LY Sbjct 196 LVPTNIIKNGK------------VPHKGILDYALNNLAFTTSDKVAKLTLDRLDKDKLYT 243 Query 245 LPH 247 +P Sbjct 244 IPQ 246 >gi|334140719|ref|YP_004533921.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] gi|333938745|emb|CCA92103.1| short-chain dehydrogenase/reductase SDR [Novosphingobium sp. PP1Y] Length=300 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 96/270 (36%), Positives = 143/270 (53%), Gaps = 7/270 (2%) Query 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVR 65 GR A +TGGA+G+GL G +V + D+ + L QA+ L E +V V DV Sbjct 6 GRTAFVTGGANGVGLGLARALVAEGCKVAIADIREDALEQALKLL--ENQEVMGVQLDVS 63 Query 66 HREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAF 125 RE AD R LG V ++F+NAG+ + I E ++DDW W++ V+L G I+ V F Sbjct 64 SREGFAEAADRVERELGPVSLLFNNAGVNLFQSIDESSYDDWDWLLGVNLHGVINGVATF 123 Query 126 LPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLC 185 PR+ E+G GGH+ TAS A + + G Y K+ V GL+E+L + GIGVS+LC Sbjct 124 APRMKERGQGGHICNTASMAAFLGSGVPGIYNTTKFAVRGLSESLRYSLAPHGIGVSMLC 183 Query 186 PMVVETNLVANSERIRGA---ACAQSSTTGSPGPL-PLQDDNLGVDDIAQLTADAILANR 241 P +V+T++ A+ E IR + A A+ L + + + + IAQ T DA+ NR Sbjct 184 PGLVKTHIFASDE-IRPSTLRAGAKDVNRAFVSQLEKVHEAGMEPEVIAQRTIDAVKENR 242 Query 242 LYVLPHAASRASIRRRFERIDRTFDEQAAE 271 Y+ H R + F + F + A+ Sbjct 243 FYIFSHPEFREELAEVFAEVIDAFRDYPAD 272 >gi|260549948|ref|ZP_05824163.1| short chain dehydrogenase [Acinetobacter sp. RUH2624] gi|260406940|gb|EEX00418.1| short chain dehydrogenase [Acinetobacter sp. RUH2624] Length=277 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 90/240 (38%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AV+TG SGIG + E A+RG VV D++ + V L EG ++ CDV + E Sbjct 17 AVVTGAGSGIGRSFALELAKRGGSVVCADINLEAAEETVKLLEQEGAKAFAMRCDVGNAE 76 Query 69 EVTHLADEAFRLLGH-VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127 +V HLA+ A LLGH V +V +NAG+ +GG E++ +DW WV++++LWG IH AF+P Sbjct 77 QVNHLAETAEILLGHPVTLVINNAGVGLGGKFDELSLEDWNWVMNINLWGVIHGCHAFVP 136 Query 128 RLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM 187 + + G G ++ AS A + AY V K GV L+ETL+ E+ I V+VLCP Sbjct 137 KFKKLGYGA-IINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELRKFNIKVNVLCPT 195 Query 188 VVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPH 247 +V TN++ N RI G + L DD+A+LT + + + LY +P Sbjct 196 LVPTNIIKNG-RIPGRYSKLADHALMNYALTTS------DDVAKLTLNRLDQDELYTIPQ 248 >gi|119477670|ref|ZP_01617820.1| hypothetical protein GP2143_09415 [marine gamma proteobacterium HTCC2143] gi|119449173|gb|EAW30413.1| hypothetical protein GP2143_09415 [marine gamma proteobacterium HTCC2143] Length=297 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 93/273 (35%), Positives = 140/273 (52%), Gaps = 8/273 (2%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F G+ A +TG ASGIGL F +G +V++ D++ L AV LR +G DV V+CD Sbjct 4 FDGKIAFVTGAASGIGLGITRAFVAKGMKVMMADIEAGPLESAVASLREQGADVAGVICD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVE-MTHDDWRWVIDVDLWGSIHTV 122 V E V A++ G V V+ +NAG+ GG + +DW+W +DV+L G ++ Sbjct 64 VSDVEAVKLAAEKTIETFGKVHVIVNNAGVGGGGGETGTIPIEDWKWTVDVNLMGVVYGC 123 Query 123 EAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS 182 E F+P + E G GG+++ TAS AG V G+G Y K+ VVG +E++ E+ GIGV+ Sbjct 124 EIFVPLIKEHGEGGYIINTASLAGQVGTVGMGPYNATKFAVVGYSESMNSELVPQGIGVA 183 Query 183 VLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN------LGVDDIAQLTADA 236 VLCP V T +A S R A QS S N + D + + ++ Sbjct 184 VLCPAWVNTQ-IAESRRNHPAGTDQSEVQNSADEELKNTVNEAISNGMSADTVGKWVVES 242 Query 237 ILANRLYVLPHAASRASIRRRFERIDRTFDEQA 269 + + LY+ H + I + R+ + D A Sbjct 243 MEQDALYIFTHPNWKVVIEAKTSRLLQAHDAAA 275 >gi|88703944|ref|ZP_01101659.1| Short-chain dehydrogenase/reductase SDR [Congregibacter litoralis KT71] gi|88701771|gb|EAQ98875.1| Short-chain dehydrogenase/reductase SDR [Congregibacter litoralis KT71] Length=276 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 91/273 (34%), Positives = 141/273 (52%), Gaps = 7/273 (2%) Query 1 VDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSV 60 ++ F ITGGA+GIGL G +G +VL DV++ L +A LRAEG VH+ Sbjct 1 MNNFDNTVGFITGGAAGIGLGVGRALGLKGMTLVLADVEENTLDKAAEELRAEGITVHTE 60 Query 61 MCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIV-EMTHDDWRWVIDVDLWGSI 119 + DVR + +A+ G V+ +F+NAG+ G E DWRWV+DV+L G + Sbjct 61 VLDVRDADAYREVAERTLATHGKVNFLFNNAGVGGGHTNAGETPLQDWRWVVDVNLMGVV 120 Query 120 HTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGI 179 H VE FLP + G +++ TAS AG N G+GAY K+ VVG +E + E+ I Sbjct 121 HGVEFFLPAMRACGESCYIINTASLAGHTANPGMGAYCATKFAVVGYSEAMRYELANSNI 180 Query 180 GVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQD-----DNLGVDDIAQLTA 234 +SVLCP V+T +A S R + +G + + D + + V+ +A+ Sbjct 181 ELSVLCPAWVKTR-IAQSRRNHPDPEEAAQASGEQDGMNMIDQIIANEGISVEALAERVV 239 Query 235 DAILANRLYVLPHAASRASIRRRFERIDRTFDE 267 D + + Y+ H +++ R +RI ++E Sbjct 240 DGMASGTFYLFTHPEFWPAMKERLDRITADYNE 272 >gi|300691461|ref|YP_003752456.1| oxidoreductase dehydrogenase [Ralstonia solanacearum PSI07] gi|299078521|emb|CBJ51176.1| putative oxidoreductase dehydrogenase [Ralstonia solanacearum PSI07] Length=300 Score = 152 bits (383), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 102/273 (38%), Positives = 142/273 (53%), Gaps = 17/273 (6%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F G AVITGGASG G A G ++VL D+ + L AV +A+G +V V D Sbjct 4 FAGGVAVITGGASGFGKTFAKLGAGLGMKLVLADIQQDALDAAVAGFQAQGVEVIGVRVD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V +V LAD A R G V+++F+NAG+ GG I E T DW WV+ V+L G IH V Sbjct 64 VSREADVQALADAAIRAFGKVNLLFNNAGVGAGGLIWENTQKDWDWVLGVNLHGVIHGVR 123 Query 124 AFLPRLLEQGT-----GGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT--A 176 F P +L + GH+V TAS AGL+ +G Y V+K+ VV L E+L ++++ Sbjct 124 IFTPLMLAEAARDPSYEGHIVNTASMAGLLNAPAMGIYNVSKHAVVALTESLYQDLSLVT 183 Query 177 DGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDN--------LGVDD 228 + I SVLCP V T + S R R A ++ + L Q N + + Sbjct 184 EQIHCSVLCPYFVPTG-ITQSHRNRPQDLANTAPP-TKSQLVAQAMNDKAVSSGKVTAEQ 241 Query 229 IAQLTADAILANRLYVLPHAASRASIRRRFERI 261 + Q+T DAI R Y+ H + A ++ RFE I Sbjct 242 VGQMTFDAIRGERFYIYSHPHALAPVQHRFEDI 274 >gi|113867547|ref|YP_726036.1| hypothetical protein H16_A1536 [Ralstonia eutropha H16] gi|113526323|emb|CAJ92668.1| conserved hypothetical protein [Ralstonia eutropha H16] Length=300 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 100/272 (37%), Positives = 140/272 (52%), Gaps = 15/272 (5%) Query 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCD 63 F + AVITGGASG G A G ++VL DV + L V +A V + D Sbjct 4 FSNKVAVITGGASGFGKEFAHIAADLGMKLVLADVQEDALDATVAEFKARNVPVIGLRTD 63 Query 64 VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVE 123 V ++V LAD A G V+++F+NAG+ GG I E + DW WV+ V+L+G +H V Sbjct 64 VSRADQVQALADAAIEAFGQVNLLFNNAGVGAGGLIWENSEKDWEWVLGVNLYGVVHGVR 123 Query 124 AFLPRLL-----EQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLARE--VTA 176 F P +L + GH+V TAS AGL+ +G Y V+K+ VV L ETL ++ + Sbjct 124 IFTPLMLAAAEKDPAYQGHIVNTASMAGLLNPPAMGVYNVSKHAVVALTETLYQDLGLVT 183 Query 177 DGIGVSVLCPMVVETNLVANSERIRGAACAQSS--TTGSPGPLPLQDDNLG-----VDDI 229 + + SVLCP V T + S+R R A A + T L D +G ++ Sbjct 184 EQVRCSVLCPYFVPTG-INQSQRNRPADLANQAPPTRSQLVSQALSDKAVGSGKVTAAEV 242 Query 230 AQLTADAILANRLYVLPHAASRASIRRRFERI 261 AQLT DAI Y+ H + A +R+RFE I Sbjct 243 AQLTFDAIRDESFYIYSHPQALAPVRQRFEDI 274 >gi|108757113|ref|YP_634033.1| short chain dehydrogenase [Myxococcus xanthus DK 1622] gi|108460993|gb|ABF86178.1| oxidoreductase, short chain dehydrogenase/reductase family [Myxococcus xanthus DK 1622] Length=274 Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 128/241 (54%), Gaps = 8/241 (3%) Query 11 ITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHREEV 70 ITGGASG+G A FAR G +V +GDV+ +A+ L A H + CDVR E++ Sbjct 8 ITGGASGLGKAIAVRFARAGWKVCIGDVNDTRGEEALKELSALAPQAHYLRCDVRREEDL 67 Query 71 THLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLL 130 D G VDVV +NAG+ G I +++ DDW+W+ID++L G + + F P Sbjct 68 REALDWLTAQWGGVDVVINNAGVAQAGAIEDVSIDDWQWIIDINLLGVVRGCKVFTPAFK 127 Query 131 EQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVE 190 +QG GH+V AS AGL+ + +Y K VV L+ETL E+ GIGVSV+CP + Sbjct 128 KQGH-GHIVNVASMAGLLDVPLMSSYNATKAAVVSLSETLHNELAEYGIGVSVVCPSFFK 186 Query 191 TNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHAAS 250 TNL +S R G+ L+ + DDIA DA+ YVLPHA Sbjct 187 TNL-GDSLR------TTDPRLGATMARLLERSAITADDIANDVFDAVAERGFYVLPHADG 239 Query 251 R 251 R Sbjct 240 R 240 >gi|26988476|ref|NP_743901.1| short chain dehydrogenase [Pseudomonas putida KT2440] gi|24983238|gb|AAN67365.1|AE016362_9 oxidoreductase, short chain dehydrogenase/reductase family [Pseudomonas putida KT2440] Length=269 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 92/260 (36%), Positives = 137/260 (53%), Gaps = 9/260 (3%) Query 10 VITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHREE 69 +ITG SG+G +AR G R+ L DV++ GLR+ + +R G D CDVR + Sbjct 6 MITGAGSGLGREIAQRWAREGWRLALADVNEAGLRETLEQVRQAGGDGFVQRCDVRDYSQ 65 Query 70 VTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRL 129 +T LA G VDV+ +NAG+ GG E+T +DW W I V+L G + +AFLP L Sbjct 66 LTALAQACEAKFGGVDVIVNNAGVASGGLFAELTLEDWDWQIAVNLMGVVKGCKAFLP-L 124 Query 130 LEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVV 189 LE+ + G ++ AS A L+ G+ Y VAK GV+ L+E+L E+ + V V+CP Sbjct 125 LER-SKGRIINVASMAALMQGPGMSNYNVAKAGVLALSESLLVELRQVEVAVHVVCPSFF 183 Query 190 ETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPHAA 249 +TNL+ + RG A + G L+ + DIA + A +LPH A Sbjct 184 QTNLL---DSFRGPNPAMKAQVGK----LLEGSPISAADIADYIHQQVAAGEFLILPHEA 236 Query 250 SRASIRRRFERIDRTFDEQA 269 R + + + + +R +DE A Sbjct 237 GRQAWQLKRQAPERLYDEMA 256 >gi|325121477|gb|ADY81000.1| putative short-chain dehydrogenase [Acinetobacter calcoaceticus PHEA-2] Length=277 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 90/240 (38%), Positives = 132/240 (55%), Gaps = 9/240 (3%) Query 9 AVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHSVMCDVRHRE 68 AV+TG SGIG + E A+RG VV D++ + V L EG ++ CDV + E Sbjct 17 AVVTGAGSGIGRSFAIELAKRGGSVVCADINLEAAEETVKLLEQEGAKAFAMRCDVGNAE 76 Query 69 EVTHLADEAFRLLGH-VDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLP 127 +V HLA+ A LLGH V +V +NAG+ +GG E++ +DW WV++++LWG IH AF+P Sbjct 77 QVNHLAETAEILLGHPVTLVINNAGVGLGGKFDELSLEDWNWVMNINLWGVIHGCHAFVP 136 Query 128 RLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPM 187 + + G G ++ AS A + AY V K GV L+ETL+ E+ I V+VLCP Sbjct 137 KFKKLGYGA-IINVASAASYTAAPEMTAYNVTKAGVRALSETLSAELHKFNIKVNVLCPT 195 Query 188 VVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILANRLYVLPH 247 +V TN++ N RI G + L DD+A+LT + + + LY +P Sbjct 196 LVPTNIIKNG-RIPGRYSKLADHALMNYALTTS------DDVARLTLNRLDQDELYTIPQ 248 Lambda K H 0.321 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 432410969436 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40