BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0854
Length=147
Score E
Sequences producing significant alignments: (Bits) Value
gi|15607994|ref|NP_215369.1| hypothetical protein Rv0854 [Mycoba... 296 5e-79
gi|294996335|ref|ZP_06802026.1| hypothetical protein Mtub2_17981... 244 2e-63
gi|254818313|ref|ZP_05223314.1| cyclase/dehydrase superfamily pr... 237 4e-61
gi|118465100|ref|YP_880235.1| cyclase/dehydrase [Mycobacterium a... 236 7e-61
gi|41406882|ref|NP_959718.1| hypothetical protein MAP0784 [Mycob... 234 3e-60
gi|296169609|ref|ZP_06851229.1| cyclase/dehydrase [Mycobacterium... 233 5e-60
gi|342860457|ref|ZP_08717108.1| cyclase/dehydrase [Mycobacterium... 229 8e-59
gi|118616173|ref|YP_904505.1| hypothetical protein MUL_0301 [Myc... 226 1e-57
gi|183984650|ref|YP_001852941.1| hypothetical protein MMAR_4682 ... 224 3e-57
gi|169627930|ref|YP_001701579.1| hypothetical protein MAB_0831 [... 202 1e-50
gi|108801463|ref|YP_641660.1| cyclase/dehydrase [Mycobacterium s... 196 1e-48
gi|240171441|ref|ZP_04750100.1| hypothetical protein MkanA1_1916... 194 5e-48
gi|120406021|ref|YP_955850.1| cyclase/dehydrase [Mycobacterium v... 191 3e-47
gi|108801462|ref|YP_641659.1| cyclase/dehydrase [Mycobacterium s... 188 2e-46
gi|333989421|ref|YP_004522035.1| hypothetical protein JDM601_078... 186 8e-46
gi|145222270|ref|YP_001132948.1| cyclase/dehydrase [Mycobacteriu... 186 1e-45
gi|118471284|ref|YP_889969.1| cyclase/dehydrase [Mycobacterium s... 184 4e-45
gi|315442701|ref|YP_004075580.1| polyketide cyclase / dehydrase ... 184 4e-45
gi|240172593|ref|ZP_04751252.1| cyclase/dehydrase [Mycobacterium... 173 7e-42
gi|41407737|ref|NP_960573.1| hypothetical protein MAP1639c [Myco... 173 7e-42
gi|118463984|ref|YP_881973.1| cyclase/dehydrase [Mycobacterium a... 173 8e-42
gi|126437449|ref|YP_001073140.1| cyclase/dehydrase [Mycobacteriu... 171 4e-41
gi|108801464|ref|YP_641661.1| cyclase/dehydrase [Mycobacterium s... 170 5e-41
gi|254821865|ref|ZP_05226866.1| hypothetical protein MintA_18167... 169 9e-41
gi|296164940|ref|ZP_06847496.1| cyclase/dehydrase [Mycobacterium... 166 8e-40
gi|145221112|ref|YP_001131790.1| cyclase/dehydrase [Mycobacteriu... 161 3e-38
gi|342859569|ref|ZP_08716222.1| hypothetical protein MCOL_11838 ... 160 4e-38
gi|325672771|ref|ZP_08152467.1| cyclase/dehydrase [Rhodococcus e... 151 3e-35
gi|312139349|ref|YP_004006685.1| hypothetical protein REQ_19380 ... 151 3e-35
gi|108801461|ref|YP_641658.1| cyclase/dehydrase [Mycobacterium s... 140 4e-32
gi|126437446|ref|YP_001073137.1| cyclase/dehydrase [Mycobacteriu... 140 4e-32
gi|226366139|ref|YP_002783922.1| hypothetical protein ROP_67300 ... 134 6e-30
gi|111023701|ref|YP_706673.1| hypothetical protein RHA1_ro06743 ... 132 1e-29
gi|229490868|ref|ZP_04384703.1| cyclase/dehydrase [Rhodococcus e... 132 1e-29
gi|333919313|ref|YP_004492894.1| hypothetical protein AS9A_1645 ... 132 2e-29
gi|226306216|ref|YP_002766176.1| hypothetical protein RER_27290 ... 132 2e-29
gi|333989422|ref|YP_004522036.1| hypothetical protein JDM601_078... 128 3e-28
gi|120406020|ref|YP_955849.1| cyclase/dehydrase [Mycobacterium v... 127 5e-28
gi|308231655|ref|ZP_07413318.2| hypothetical protein TMAG_00793 ... 125 3e-27
gi|340625871|ref|YP_004744323.1| hypothetical protein MCAN_08591... 124 4e-27
gi|240171438|ref|ZP_04750097.1| hypothetical protein MkanA1_1914... 123 9e-27
gi|15840270|ref|NP_335307.1| hypothetical protein MT0880 [Mycoba... 123 1e-26
gi|145222271|ref|YP_001132949.1| cyclase/dehydrase [Mycobacteriu... 122 1e-26
gi|296169612|ref|ZP_06851232.1| cyclase/dehydrase [Mycobacterium... 120 8e-26
gi|326384683|ref|ZP_08206361.1| cyclase/dehydrase [Gordonia neof... 119 1e-25
gi|262200730|ref|YP_003271938.1| cyclase/dehydrase [Gordonia bro... 118 2e-25
gi|311895583|dbj|BAJ27991.1| hypothetical protein KSE_21690 [Kit... 117 5e-25
gi|183984648|ref|YP_001852939.1| hypothetical protein MMAR_4680 ... 117 8e-25
gi|41406885|ref|NP_959721.1| hypothetical protein MAP0787 [Mycob... 116 1e-24
gi|118467176|ref|YP_880238.1| hypothetical protein MAV_0978 [Myc... 116 1e-24
>gi|15607994|ref|NP_215369.1| hypothetical protein Rv0854 [Mycobacterium tuberculosis H37Rv]
gi|15840267|ref|NP_335304.1| hypothetical protein MT0877 [Mycobacterium tuberculosis CDC1551]
gi|31792042|ref|NP_854535.1| hypothetical protein Mb0877 [Mycobacterium bovis AF2122/97]
79 more sequence titles
Length=147
Score = 296 bits (759), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG
Sbjct 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV
Sbjct 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRAIKGTIDTATEALRSQVLKVKKGQ
Sbjct 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
>gi|294996335|ref|ZP_06802026.1| hypothetical protein Mtub2_17981 [Mycobacterium tuberculosis
210]
Length=120
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%), Gaps = 0/120 (0%)
Query 28 MTEWSPAHQSVEILETGDDGRPSKVKMKVKTAGITDEQVVAYSWTDRSVRWTLVSSTQQR 87
MTEWSPAHQSVEILETGDDGRPSKVKMKVKTAGITDEQVVAYSWTDRSVRWTLVSSTQQR
Sbjct 1 MTEWSPAHQSVEILETGDDGRPSKVKMKVKTAGITDEQVVAYSWTDRSVRWTLVSSTQQR 60
Query 88 SQDGKYELTPKGDNTLVQFEITVDPQVPLPGFVLKRAIKGTIDTATEALRSQVLKVKKGQ 147
SQDGKYELTPKGDNTLVQFEITVDPQVPLPGFVLKRAIKGTIDTATEALRSQVLKVKKGQ
Sbjct 61 SQDGKYELTPKGDNTLVQFEITVDPQVPLPGFVLKRAIKGTIDTATEALRSQVLKVKKGQ 120
>gi|254818313|ref|ZP_05223314.1| cyclase/dehydrase superfamily protein [Mycobacterium intracellulare
ATCC 13950]
Length=147
Score = 237 bits (604), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 111/147 (76%), Positives = 130/147 (89%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESRDIVIEASPEEILDVIADFE+M EWS HQS E+LETGDDGRP +V+M+VK AG
Sbjct 1 MALKESRDIVIEASPEEILDVIADFESMPEWSEPHQSAEVLETGDDGRPRQVRMRVKVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAY+W D +V WTLVSS+QQ++QDGKY L P+GD TLV+FE+ DP VPLPGFV
Sbjct 61 ITDEQVVAYTWADNAVSWTLVSSSQQKAQDGKYTLIPQGDKTLVKFELLADPNVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRA+KGTID+AT+ALR +VL VKKG+
Sbjct 121 LKRAVKGTIDSATKALRERVLTVKKGK 147
>gi|118465100|ref|YP_880235.1| cyclase/dehydrase [Mycobacterium avium 104]
gi|118166387|gb|ABK67284.1| cyclase/dehydrase superfamily protein [Mycobacterium avium 104]
Length=147
Score = 236 bits (603), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 111/147 (76%), Positives = 130/147 (89%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESRDIVIEASPEEILDVIADFE+M +WS HQS E+L TGDDGRPS+V+MKVK AG
Sbjct 1 MALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGDDGRPSQVRMKVKVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAY+W D V WTLVSS+QQ++QDGKY L P+GD TLV+FE+ DP VPLPGFV
Sbjct 61 ITDEQVVAYTWADNVVSWTLVSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRA+KGTID+AT+ALR +VL+VKKG+
Sbjct 121 LKRAVKGTIDSATKALRQRVLEVKKGK 147
>gi|41406882|ref|NP_959718.1| hypothetical protein MAP0784 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395232|gb|AAS03101.1| hypothetical protein MAP_0784 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461196|gb|EGO40072.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium
avium subsp. paratuberculosis S397]
Length=147
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/147 (75%), Positives = 129/147 (88%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESRDIVIEASPEEILDVIADFE+M +WS HQS E+L TG DGRPS+V+MKVK AG
Sbjct 1 MALKESRDIVIEASPEEILDVIADFESMPQWSEPHQSAEVLATGHDGRPSQVRMKVKVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAY+W D V WTLVSS+QQ++QDGKY L P+GD TLV+FE+ DP VPLPGFV
Sbjct 61 ITDEQVVAYTWADNVVSWTLVSSSQQKAQDGKYTLVPQGDATLVKFELVADPNVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRA+KGTID+AT+ALR +VL+VKKG+
Sbjct 121 LKRAVKGTIDSATKALRQRVLEVKKGK 147
>gi|296169609|ref|ZP_06851229.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895875|gb|EFG75570.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=147
Score = 233 bits (595), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 112/147 (77%), Positives = 126/147 (86%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESRDIVIEASPEEILDVIADFEAM EWS HQS E+L TG DGRP +VKMKVK AG
Sbjct 1 MALKESRDIVIEASPEEILDVIADFEAMPEWSEPHQSAEVLSTGADGRPEQVKMKVKVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAY+W SV W LVSS+QQ++QDGKY L P+GD TLV+FE+ DP VPLPGFV
Sbjct 61 ITDEQVVAYTWAADSVSWKLVSSSQQKAQDGKYTLVPQGDATLVKFELLADPNVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRA+KGTID+AT+ALR +VLKVKKG
Sbjct 121 LKRAVKGTIDSATKALRERVLKVKKGN 147
>gi|342860457|ref|ZP_08717108.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
gi|342132112|gb|EGT85353.1| cyclase/dehydrase [Mycobacterium colombiense CECT 3035]
Length=147
Score = 229 bits (585), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 108/147 (74%), Positives = 128/147 (88%), Gaps = 0/147 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESRDIVIEASPEEILDVIADFEAM EWS HQS EIL+TGDDGRP +V+MKV+ AG
Sbjct 1 MALKESRDIVIEASPEEILDVIADFEAMPEWSEPHQSAEILDTGDDGRPRQVRMKVRVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQV+AY+W D V W LVSS+QQ++QDGKY L P+ + TLV+FE+ DP VPLPGFV
Sbjct 61 ITDEQVIAYTWGDNVVSWKLVSSSQQKAQDGKYTLVPQDNGTLVKFELLADPNVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKGQ 147
LKRA+KGTID+AT+ALR +VL+VKKG+
Sbjct 121 LKRAVKGTIDSATKALRERVLQVKKGK 147
>gi|118616173|ref|YP_904505.1| hypothetical protein MUL_0301 [Mycobacterium ulcerans Agy99]
gi|118568283|gb|ABL03034.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=146
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/146 (76%), Positives = 123/146 (85%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAIKE+RDIVIEASP+EILDVIADFEAM EWS HQS EI ETG DGRPS+VKMKVKTAG
Sbjct 1 MAIKETRDIVIEASPQEILDVIADFEAMPEWSSPHQSAEIFETGADGRPSQVKMKVKTAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAYSW D V W+LVSS QQRSQ+G Y LTP+GD T V+ E+ VD VPLPGFV
Sbjct 61 ITDEQVVAYSWGDNKVNWSLVSSGQQRSQEGSYLLTPEGDKTRVKLELAVDAVVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
LKRA+KGT+++ + LR QVLKVKKG
Sbjct 121 LKRAVKGTVESGLDELRKQVLKVKKG 146
>gi|183984650|ref|YP_001852941.1| hypothetical protein MMAR_4682 [Mycobacterium marinum M]
gi|183177976|gb|ACC43086.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=146
Score = 224 bits (572), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/146 (76%), Positives = 123/146 (85%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAIKE+RDIVIEASP+EILDVIADFEAM WS HQS EILETG DGRPS+VKMKVKTAG
Sbjct 1 MAIKETRDIVIEASPQEILDVIADFEAMPGWSSPHQSAEILETGADGRPSQVKMKVKTAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQVVAYSW D V W+LVSS QQRSQ+G Y LTP+GD T V+ E+ VD VPLPGFV
Sbjct 61 ITDEQVVAYSWGDNKVNWSLVSSGQQRSQEGSYLLTPEGDKTRVKLELAVDAVVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
LKRA+KGT+++ + LR QVLKVKKG
Sbjct 121 LKRAVKGTVESGLDELRKQVLKVKKG 146
>gi|169627930|ref|YP_001701579.1| hypothetical protein MAB_0831 [Mycobacterium abscessus ATCC 19977]
gi|169239897|emb|CAM60925.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=145
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 94/141 (67%), Positives = 116/141 (83%), Gaps = 0/141 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA ++R+IVIEA+PE+I+DVIADFE + +WS AHQS +L TG+DGRP +V MKVKTAG
Sbjct 1 MATSDTREIVIEATPEQIMDVIADFEVLPKWSSAHQSSTVLTTGEDGRPHQVTMKVKTAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQ VAY+W +V WTLV ++QQR QDGKY TP+GD T V+FE+TVDP +PLPGFV
Sbjct 61 ITDEQTVAYTWGPDTVSWTLVKASQQRRQDGKYTFTPQGDKTHVKFELTVDPLIPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVL 141
LKRAIKG ++TAT+ LR QVL
Sbjct 121 LKRAIKGAMETATDGLRKQVL 141
>gi|108801463|ref|YP_641660.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119870616|ref|YP_940568.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|126437448|ref|YP_001073139.1| cyclase/dehydrase [Mycobacterium sp. JLS]
gi|108771882|gb|ABG10604.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119696705|gb|ABL93778.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|126237248|gb|ABO00649.1| cyclase/dehydrase [Mycobacterium sp. JLS]
Length=148
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/146 (65%), Positives = 116/146 (80%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ +SR++VIEA+P +ILDVIAD EA WSP +QS EIL+T DGRP +VKMKVK+AG
Sbjct 1 MAVSDSREVVIEATPAQILDVIADVEATPSWSPQYQSAEILDTYADGRPRQVKMKVKSAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITDEQV+ Y+WTD V WTLVS+ Q ++QD Y LTP G+ T V+F+I VD VPLPGFV
Sbjct 61 ITDEQVIEYTWTDSKVSWTLVSAGQLKAQDASYTLTPDGEKTKVRFDIKVDLSVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
LKRA+KG ++TAT+ LR QVLKV KG
Sbjct 121 LKRAMKGAMETATDGLRKQVLKVAKG 146
>gi|240171441|ref|ZP_04750100.1| hypothetical protein MkanA1_19161 [Mycobacterium kansasii ATCC
12478]
Length=147
Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 91/146 (63%), Positives = 115/146 (79%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+KESR++VIEASP+EILDV+AD EAM EWS HQS ++LE DDGRP + +MKVKTAG
Sbjct 1 MAVKESREVVIEASPKEILDVVADIEAMPEWSDIHQSAQVLERHDDGRPRRARMKVKTAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TDE V+AY+W D V WT S R+Q+G Y LTP+GD T +F++++DP VPLPGFV
Sbjct 61 VTDEIVLAYTWRDDGVTWTQESGKASRNQEGGYTLTPEGDKTRTKFDLSLDPLVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
+KRAIKG I+ T+ LR +VLKVKKG
Sbjct 121 IKRAIKGVIEINTDGLRKRVLKVKKG 146
>gi|120406021|ref|YP_955850.1| cyclase/dehydrase [Mycobacterium vanbaalenii PYR-1]
gi|119958839|gb|ABM15844.1| cyclase/dehydrase [Mycobacterium vanbaalenii PYR-1]
Length=156
Score = 191 bits (485), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 90/146 (62%), Positives = 113/146 (78%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA K+SR++VIEA+PE+ILDVIAD EA WSP +Q EIL+ D+GRP +V+M VK AG
Sbjct 11 MATKDSREVVIEATPEQILDVIADVEATPTWSPQYQKAEILDRYDNGRPKQVRMTVKAAG 70
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TDEQV+ Y+W D V WTLVS+TQ ++QD Y LTP GD T V+F+I +D VPLPGF+
Sbjct 71 LTDEQVIEYTWGDNEVSWTLVSATQLKAQDAGYTLTPAGDKTKVKFDIAIDLSVPLPGFI 130
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
+KR IKG ++TATE LR QVLKV KG
Sbjct 131 IKRTIKGGVETATEGLRKQVLKVIKG 156
>gi|108801462|ref|YP_641659.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119870615|ref|YP_940567.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|126437447|ref|YP_001073138.1| cyclase/dehydrase [Mycobacterium sp. JLS]
gi|108771881|gb|ABG10603.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119696704|gb|ABL93777.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|126237247|gb|ABO00648.1| cyclase/dehydrase [Mycobacterium sp. JLS]
Length=146
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/146 (62%), Positives = 115/146 (79%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI ESR++VIEASP++I++V+ D E++TEWS AHQ VEILE D+GRP + + VK G
Sbjct 1 MAITESREVVIEASPDDIMEVLYDLESLTEWSSAHQKVEILERDDEGRPKRSRQVVKIVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
I+DEQV+ Y+ D V WTLVSS QQR+QDG+Y LTP GD T V+FE+TVDP VPLPGFV
Sbjct 61 ISDEQVLDYTVHDDGVSWTLVSSKQQRAQDGRYFLTPDGDRTKVRFELTVDPTVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
+K+ KG ++TAT+ LR +VLKVK G
Sbjct 121 VKKGAKGLMETATDGLRKRVLKVKGG 146
>gi|333989421|ref|YP_004522035.1| hypothetical protein JDM601_0781 [Mycobacterium sp. JDM601]
gi|333485389|gb|AEF34781.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=139
Score = 186 bits (473), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 85/139 (62%), Positives = 113/139 (82%), Gaps = 0/139 (0%)
Query 9 IVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAGITDEQVVA 68
+VIEASPEEI DV+AD E++ WSP +QS E+L+T DDGRP +V+M++K AG+TDEQVV
Sbjct 1 MVIEASPEEIFDVLADVESVPSWSPQYQSAEVLDTHDDGRPRRVRMRIKAAGLTDEQVVE 60
Query 69 YSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFVLKRAIKGT 128
YSWT SV WTLVS+ Q ++QD KY LTP+G+ T V+F++ VDP +P+PGF+LK +KG
Sbjct 61 YSWTADSVGWTLVSAGQLKAQDAKYTLTPQGEATKVRFDMAVDPSIPIPGFLLKNTLKGG 120
Query 129 IDTATEALRSQVLKVKKGQ 147
+ TAT+ LR+QVLKVKKG+
Sbjct 121 MKTATDGLRTQVLKVKKGR 139
>gi|145222270|ref|YP_001132948.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
gi|145214756|gb|ABP44160.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
Length=146
Score = 186 bits (471), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/146 (61%), Positives = 113/146 (78%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA K+SR++VIEA+PE+ILDVIAD EA WSP +Q E+LE D+GRP +VKM VK AG
Sbjct 1 MATKDSREVVIEATPEQILDVIADVEATPTWSPQYQKAEVLERFDNGRPKQVKMTVKAAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TDEQV+ Y+W D V WTLVS++Q ++QD Y LTP+GD T V+F+I +D VPLPGF+
Sbjct 61 LTDEQVIEYTWGDDRVTWTLVSASQLKAQDAGYTLTPEGDKTRVRFDIAIDLSVPLPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
LKR +KG ++TATE L+ QV KV KG
Sbjct 121 LKRTMKGGVETATEGLKKQVHKVLKG 146
>gi|118471284|ref|YP_889969.1| cyclase/dehydrase [Mycobacterium smegmatis str. MC2 155]
gi|118172571|gb|ABK73467.1| cyclase/dehydrase [Mycobacterium smegmatis str. MC2 155]
Length=146
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 85/146 (59%), Positives = 112/146 (77%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA +SR+++IEASPEEILDVIAD E+ WSP + EI E DDGRP + KM VK AG
Sbjct 1 MATSDSREVLIEASPEEILDVIADVESTPSWSPQYTHAEITERYDDGRPRRAKMTVKAAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TD+QV+ Y+W++ V WTLVS+ Q ++QD Y LTP+GD T V+F+I++D VPLPGF+
Sbjct 61 LTDDQVIEYTWSENKVSWTLVSAGQLKAQDASYTLTPQGDKTKVRFDISIDLSVPLPGFI 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
+KR +KG ++TAT+ LR QVLKVKKG
Sbjct 121 VKRTMKGGVETATDGLRKQVLKVKKG 146
>gi|315442701|ref|YP_004075580.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
gi|315261004|gb|ADT97745.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
Length=146
Score = 184 bits (467), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 87/146 (60%), Positives = 113/146 (78%), Gaps = 0/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA K+SR++VIEA+PE+ILDVIAD EA WSP +Q E+L+ D+GRP +VKM VK AG
Sbjct 1 MATKDSREVVIEATPEQILDVIADVEATPTWSPQYQKAEVLDRFDNGRPKQVKMTVKAAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TDEQV+ Y+W D V WTLVS++Q ++QD Y LTP+GD T V+F+I +D VPLPGF+
Sbjct 61 LTDEQVIEYTWGDDRVTWTLVSASQLKAQDAGYTLTPEGDKTRVRFDIAIDLSVPLPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKKG 146
LKR +KG ++TATE L+ QV KV KG
Sbjct 121 LKRTMKGGVETATEGLKKQVHKVLKG 146
>gi|240172593|ref|ZP_04751252.1| cyclase/dehydrase [Mycobacterium kansasii ATCC 12478]
Length=148
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/144 (58%), Positives = 108/144 (75%), Gaps = 0/144 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ESR++VIEA+P+EILDV+ D E++ +WS H+ VEILE D GRP+K + +V+ G
Sbjct 1 MAVTESRELVIEATPKEILDVLFDLESLPQWSSIHRKVEILERDDQGRPTKSRQEVRVVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
I DEQV+ YS D V WTLVS+ QQR Q G+Y LTP GD+T V+F++TVD VPLPGFV
Sbjct 61 IGDEQVLDYSVHDDGVSWTLVSAKQQRRQQGRYTLTPDGDSTRVRFDLTVDLLVPLPGFV 120
Query 121 LKRAIKGTIDTATEALRSQVLKVK 144
++R KG +DTAT LR +VL VK
Sbjct 121 VRRGAKGVMDTATRGLRDRVLAVK 144
>gi|41407737|ref|NP_960573.1| hypothetical protein MAP1639c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|254775265|ref|ZP_05216781.1| hypothetical protein MaviaA2_11426 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41396090|gb|AAS03956.1| hypothetical protein MAP_1639c [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336457398|gb|EGO36407.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium
avium subsp. paratuberculosis S397]
Length=149
Score = 173 bits (439), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/145 (58%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI +SR++VIEA+PEEILDV+ D E++TEWSPAHQ VE+LE ++ P + + VK G
Sbjct 1 MAITDSREVVIEATPEEILDVLFDLESLTEWSPAHQKVEVLERDEENHPIRSRQVVKLVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
I+DEQ +AY+ D V WTLVSS QQR+Q G+Y LTP+GD T V FE+TVD +P+PGF+
Sbjct 61 ISDEQELAYTIYDDGVGWTLVSSKQQRAQQGRYTLTPEGDATRVHFELTVDLVMPVPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+K+ K +DTATE LR +V +VKK
Sbjct 121 IKKGSKSLMDTATEGLRKRVAEVKK 145
>gi|118463984|ref|YP_881973.1| cyclase/dehydrase [Mycobacterium avium 104]
gi|118165271|gb|ABK66168.1| cyclase/dehydrase superfamily protein [Mycobacterium avium 104]
Length=149
Score = 173 bits (439), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 83/145 (58%), Positives = 110/145 (76%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI +SR++VIEA+PEEILDV+ D E++TEWSPAHQ VE+LE ++ P + + VK G
Sbjct 1 MAITDSREVVIEATPEEILDVLFDLESLTEWSPAHQKVEVLERDEENHPIRSRQVVKLVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
I+DEQ +AY+ D V WTLVSS QQR+Q G+Y LTP+GD T V FE+TVD +P+PGF+
Sbjct 61 ISDEQELAYTIYDDGVGWTLVSSKQQRAQQGRYTLTPEGDATRVHFELTVDLVMPVPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+K+ K +DTATE LR +V +VKK
Sbjct 121 IKKGSKSLMDTATEGLRKRVTEVKK 145
>gi|126437449|ref|YP_001073140.1| cyclase/dehydrase [Mycobacterium sp. JLS]
gi|126237249|gb|ABO00650.1| cyclase/dehydrase [Mycobacterium sp. JLS]
Length=148
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/145 (57%), Positives = 108/145 (75%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI+ESR++VIEA +EIL V+ D EA+ EWSPAH+S +L+ + GRP++ + V T G
Sbjct 1 MAIRESREVVIEAPVDEILLVMLDLEALPEWSPAHRSSVVLDRDEHGRPTRSRATVTTVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITD Q +A S+ D WTL+SST QRSQD +Y L P+GD T V+FE+TVDP +PLPGF+
Sbjct 61 ITDVQEIALSYYDDGYGWTLLSSTYQRSQDARYRLIPEGDRTRVRFEVTVDPIMPLPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+RA KG IDTAT LR +VL+V+K
Sbjct 121 SRRAAKGVIDTATHGLRKRVLEVRK 145
>gi|108801464|ref|YP_641661.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119870617|ref|YP_940569.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|108771883|gb|ABG10605.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119696706|gb|ABL93779.1| cyclase/dehydrase [Mycobacterium sp. KMS]
Length=148
Score = 170 bits (431), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/145 (57%), Positives = 107/145 (74%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI+ESR++VIEA EIL V+ D EA+ EWSPAH+S +L+ + GRP++ + V T G
Sbjct 1 MAIRESREVVIEAPVNEILLVMLDLEALPEWSPAHRSSVVLDRDEHGRPTRSRATVTTVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITD Q +A S+ D WTL+SST QRSQD +Y L P+GD T V+FE+TVDP +PLPGF+
Sbjct 61 ITDVQEIALSYYDDGYGWTLLSSTYQRSQDARYRLIPEGDRTRVRFEVTVDPIMPLPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+RA KG IDTAT LR +VL+V+K
Sbjct 121 SRRAAKGVIDTATHGLRKRVLEVRK 145
>gi|254821865|ref|ZP_05226866.1| hypothetical protein MintA_18167 [Mycobacterium intracellulare
ATCC 13950]
Length=148
Score = 169 bits (429), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/145 (55%), Positives = 112/145 (78%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI +SR++VIEA+P+EILDV+ D E++TEWS AH+ VE+LE D P++ + VK G
Sbjct 1 MAITDSREVVIEATPDEILDVLFDLESLTEWSSAHKKVEVLERDDQNHPTRSRQVVKLVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
++DEQ +AY+ D V WTL+SS QQR+Q+G+Y LTP+GD+T V+F++TVD P+PGF+
Sbjct 61 VSDEQELAYTVHDDGVGWTLISSKQQRAQEGRYTLTPEGDSTRVRFDLTVDLVAPVPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+KR K +DTATE LR +VL+V+K
Sbjct 121 VKRGAKTLMDTATEGLRKRVLEVEK 145
>gi|296164940|ref|ZP_06847496.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899782|gb|EFG79232.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=148
Score = 166 bits (421), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 77/145 (54%), Positives = 109/145 (76%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ESR++VIEA+P+E++DV+ D E++ EWS HQ VE+LE D G P++ K VK G
Sbjct 1 MAVTESREVVIEATPDEVMDVLFDIESLPEWSSVHQKVEVLERDDQGHPARSKQVVKLVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
++DEQ +AY+ D V WTLV++ QQR+QDG+Y LTP GD T V+F++TVD +P+PGF+
Sbjct 61 VSDEQELAYTVHDDGVSWTLVTAKQQRAQDGRYTLTPDGDATRVRFDLTVDLLMPVPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+KR K +DTAT+ LR +VL+ KK
Sbjct 121 IKRGSKSLMDTATKGLRKRVLERKK 145
>gi|145221112|ref|YP_001131790.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
gi|315441925|ref|YP_004074804.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
gi|145213598|gb|ABP43002.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
gi|315260228|gb|ADT96969.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
Length=145
Score = 161 bits (407), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/144 (53%), Positives = 107/144 (75%), Gaps = 0/144 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI E+R+IVIEA+ +EIL V+ D E++TEWS AHQ+VEILE ++GRP + + VK G
Sbjct 1 MAITENREIVIEATRDEILAVLYDLESLTEWSSAHQTVEILERDEEGRPKRSRQVVKIVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
++D+Q++ Y D V WTLV S QQR+Q+ +Y LT +G++T V+ E+ VD + PLPGF+
Sbjct 61 VSDDQILDYHVYDDGVGWTLVRSDQQRAQEARYRLTQEGESTRVRLELMVDLKAPLPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVK 144
+K+ KG +DTAT LR +VLK+K
Sbjct 121 VKKGAKGLMDTATHGLRKRVLKIK 144
>gi|342859569|ref|ZP_08716222.1| hypothetical protein MCOL_11838 [Mycobacterium colombiense CECT
3035]
gi|342132701|gb|EGT85921.1| hypothetical protein MCOL_11838 [Mycobacterium colombiense CECT
3035]
Length=148
Score = 160 bits (406), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 76/145 (53%), Positives = 107/145 (74%), Gaps = 0/145 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI +SR++VIEA+P+EI DV+ D E++ EWS AH+ VE+LE D P++ + VK G
Sbjct 1 MAITDSREVVIEATPDEIKDVLFDIESLPEWSSAHKKVEVLERDDQNHPTRSRQVVKLVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
++DEQ + Y+ D V WTLVSS QQR+Q+G+Y LTP+GD+T V FE+ VD P+PGF+
Sbjct 61 VSDEQELEYTVHDDGVGWTLVSSKQQRAQEGRYTLTPEGDSTRVHFELMVDLVAPVPGFL 120
Query 121 LKRAIKGTIDTATEALRSQVLKVKK 145
+K+ K +DTATE LR +VL+V+K
Sbjct 121 VKKGAKSLMDTATEGLRKRVLEVEK 145
>gi|325672771|ref|ZP_08152467.1| cyclase/dehydrase [Rhodococcus equi ATCC 33707]
gi|325556648|gb|EGD26314.1| cyclase/dehydrase [Rhodococcus equi ATCC 33707]
Length=147
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/137 (52%), Positives = 97/137 (71%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ +++ +EA+P +++ IA + + EWS AH+ V + T DGRP +V+M V G
Sbjct 4 MAVSGAKEFQVEAAPADVMAAIAAVDRLPEWSSAHKKVIVESTHADGRPCRVRMTVSIMG 63
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I DEQVV YSW D + WTLV STQQ SQDG Y LTPKGD TLV+F +TVDP++PLPGF
Sbjct 64 INDEQVVDYSWDGDTGMSWTLVESTQQNSQDGSYTLTPKGDGTLVKFALTVDPKIPLPGF 123
Query 120 VLKRAIKGTIDTATEAL 136
+LK+A K ++TA++ L
Sbjct 124 LLKKAQKMALETASQGL 140
>gi|312139349|ref|YP_004006685.1| hypothetical protein REQ_19380 [Rhodococcus equi 103S]
gi|311888688|emb|CBH48000.1| conserved hypothetical protein [Rhodococcus equi 103S]
Length=144
Score = 151 bits (382), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/137 (52%), Positives = 97/137 (71%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ +++ +EA+P +++ IA + + EWS AH+ V + T DGRP +V+M V G
Sbjct 1 MAVSGAKEFQVEAAPADVMAAIAAVDRLPEWSSAHKKVIVESTHADGRPCRVRMTVSIMG 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I DEQVV YSW D + WTLV STQQ SQDG Y LTPKGD TLV+F +TVDP++PLPGF
Sbjct 61 INDEQVVDYSWDGDTGMSWTLVESTQQNSQDGSYTLTPKGDGTLVKFALTVDPKIPLPGF 120
Query 120 VLKRAIKGTIDTATEAL 136
+LK+A K ++TA++ L
Sbjct 121 LLKKAQKMALETASQGL 137
>gi|108801461|ref|YP_641658.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119870614|ref|YP_940566.1| cyclase/dehydrase [Mycobacterium sp. KMS]
gi|108771880|gb|ABG10602.1| cyclase/dehydrase [Mycobacterium sp. MCS]
gi|119696703|gb|ABL93776.1| cyclase/dehydrase [Mycobacterium sp. KMS]
Length=147
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/141 (47%), Positives = 95/141 (68%), Gaps = 0/141 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ SR++V +ASPE ILDV+AD EA+ WS ++ V +L+ DGRP +VK ++ G
Sbjct 1 MAVRASREVVFDASPEAILDVLADIEALPAWSSVYKKVTVLDRHPDGRPRRVKATLRLMG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITD +++ Y W V W + QQR Q +Y LTP+GD T V+F+I VDP P+P F+
Sbjct 61 ITDNEILEYHWGRHWVVWDAEDTFQQRGQHVEYNLTPEGDRTRVRFDIIVDPSAPIPQFL 120
Query 121 LKRAIKGTIDTATEALRSQVL 141
+KRA K + +ATE LR++V+
Sbjct 121 VKRAKKIVLHSATEGLRARVM 141
>gi|126437446|ref|YP_001073137.1| cyclase/dehydrase [Mycobacterium sp. JLS]
gi|126237246|gb|ABO00647.1| cyclase/dehydrase [Mycobacterium sp. JLS]
Length=147
Score = 140 bits (354), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 65/141 (47%), Positives = 95/141 (68%), Gaps = 0/141 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ SR++V +ASPE ILDV+AD EA+ WS ++ V +L+ DGRP +VK ++ G
Sbjct 1 MAVRASREVVFDASPEAILDVLADIEALPAWSSVYRKVTVLDRHPDGRPRRVKATLRLMG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
ITD +++ Y W V W + QQR Q +Y LTP+GD T V+F+I VDP P+P F+
Sbjct 61 ITDNEILEYHWGRHWVVWDAEDTFQQRGQHVEYNLTPEGDRTRVRFDIIVDPSAPIPQFL 120
Query 121 LKRAIKGTIDTATEALRSQVL 141
+KRA K + +ATE LR++V+
Sbjct 121 VKRAKKIVLHSATEGLRARVM 141
>gi|226366139|ref|YP_002783922.1| hypothetical protein ROP_67300 [Rhodococcus opacus B4]
gi|226244629|dbj|BAH54977.1| hypothetical protein [Rhodococcus opacus B4]
Length=144
Score = 134 bits (336), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/137 (49%), Positives = 92/137 (68%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ++ I+A P ++ IA + + EWS AH+SV I T DDGRP +V+M V G
Sbjct 1 MAVSGVKEFEIKADPATVMAAIAAVDRLPEWSSAHKSVTIESTHDDGRPHRVRMSVSILG 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I+DEQVV Y++ D +V W LV S QQ +QDG Y LT G T V FE+TVDP++PLPGF
Sbjct 61 ISDEQVVDYTFEGDNTVSWHLVESGQQNAQDGSYVLTESGAGTKVTFELTVDPKIPLPGF 120
Query 120 VLKRAIKGTIDTATEAL 136
++K+A K ++TA++ L
Sbjct 121 LVKKAQKTALETASKGL 137
>gi|111023701|ref|YP_706673.1| hypothetical protein RHA1_ro06743 [Rhodococcus jostii RHA1]
gi|110823231|gb|ABG98515.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=144
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/137 (49%), Positives = 92/137 (68%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ++ I+A P ++ IA + + EWS AH+SV I T DDGRP +V+M V G
Sbjct 1 MAVSGVKEFEIKADPATVMAAIAAVDRLPEWSSAHKSVTIESTHDDGRPHRVRMSVSILG 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I+DEQVV Y++ D +V W LV S QQ +QDG Y LT G T V FE+TVDP++PLPGF
Sbjct 61 ISDEQVVDYTFEGDDTVSWHLVESGQQNAQDGSYVLTESGAGTKVTFELTVDPKIPLPGF 120
Query 120 VLKRAIKGTIDTATEAL 136
++K+A K ++TA++ L
Sbjct 121 LVKKAQKTALETASKGL 137
>gi|229490868|ref|ZP_04384703.1| cyclase/dehydrase [Rhodococcus erythropolis SK121]
gi|229322258|gb|EEN88044.1| cyclase/dehydrase [Rhodococcus erythropolis SK121]
Length=144
Score = 132 bits (333), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/137 (47%), Positives = 90/137 (66%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ++ I+A PE ++ +A + + EWS AH+ + I T DDGRP +V+M V G
Sbjct 1 MAVSGVKEFEIKADPETVMKAVAAVDRLPEWSSAHKKITIESTHDDGRPHRVRMAVSILG 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I DEQVV Y++ D V WTLV S QQ QDG Y LTP T V FE+T+DP++PLPGF
Sbjct 61 INDEQVVDYTFEGDEKVTWTLVESGQQNQQDGSYVLTPTDGGTKVTFELTIDPKIPLPGF 120
Query 120 VLKRAIKGTIDTATEAL 136
++K+A K ++TA++ L
Sbjct 121 LVKKAQKTALETASKGL 137
>gi|333919313|ref|YP_004492894.1| hypothetical protein AS9A_1645 [Amycolicicoccus subflavus DQS3-9A1]
gi|333481534|gb|AEF40094.1| hypothetical protein AS9A_1645 [Amycolicicoccus subflavus DQS3-9A1]
Length=145
Score = 132 bits (332), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 62/138 (45%), Positives = 95/138 (69%), Gaps = 1/138 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
M + S D ++A PE++++ IAD E++ WS +H+ VE+ DDGRP++V M + T G
Sbjct 1 MPVSGSIDFDVKAPPEKVMEAIADVESLPLWSSSHRKVEVKSRHDDGRPARVWMAISTMG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVS-STQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
++DEQ+V YS+ D +V W LV S QQ+SQ G Y LTP T V+FE+TVD ++P+PGF
Sbjct 61 VSDEQLVEYSFEDNAVSWELVEPSGQQKSQSGAYVLTPSAKGTSVKFELTVDLKIPMPGF 120
Query 120 VLKRAIKGTIDTATEALR 137
++KR K ++TA++ L+
Sbjct 121 LVKRGQKMALETASKGLK 138
>gi|226306216|ref|YP_002766176.1| hypothetical protein RER_27290 [Rhodococcus erythropolis PR4]
gi|226185333|dbj|BAH33437.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=144
Score = 132 bits (331), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/137 (47%), Positives = 90/137 (66%), Gaps = 1/137 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ ++ I+A PE ++ +A + + EWS AH+ + I T DDGRP +V+M V G
Sbjct 1 MAVSGVKEFEIKADPETVMKAVAAVDRLPEWSSAHKKITIESTHDDGRPHRVRMAVSILG 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I DEQVV Y++ D V WTLV S QQ QDG Y LTP T V FE+T+DP++PLPGF
Sbjct 61 INDEQVVDYTFEGDDKVTWTLVESGQQNQQDGSYVLTPTDGGTKVTFELTIDPKIPLPGF 120
Query 120 VLKRAIKGTIDTATEAL 136
++K+A K ++TA++ L
Sbjct 121 LVKKAQKTALETASKGL 137
>gi|333989422|ref|YP_004522036.1| hypothetical protein JDM601_0783 [Mycobacterium sp. JDM601]
gi|333485391|gb|AEF34783.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=141
Score = 128 bits (321), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/136 (46%), Positives = 92/136 (68%), Gaps = 1/136 (0%)
Query 10 VIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAGITDEQVVAY 69
+I+A PE+ILD +A+ + WSP H+ VEIL+T +DGRP V+ VK G+ D++++ Y
Sbjct 1 MIDAPPEKILDALANVADLVSWSPVHKRVEILDTYEDGRPHHVRATVKVLGLVDKEILEY 60
Query 70 SWTDRSVRWTLVSSTQQRSQDGKYELTPKG-DNTLVQFEITVDPQVPLPGFVLKRAIKGT 128
W V W ++TQQR+Q +Y LT +G D T V+F+ITV+P P+P F+++RA K
Sbjct 61 HWGPDWVVWDAKATTQQRAQHVEYTLTKEGPDTTRVRFDITVEPSGPIPAFLVRRASKLV 120
Query 129 IDTATEALRSQVLKVK 144
+DTATE LR QV+ +
Sbjct 121 LDTATEGLRQQVMGTR 136
>gi|120406020|ref|YP_955849.1| cyclase/dehydrase [Mycobacterium vanbaalenii PYR-1]
gi|119958838|gb|ABM15843.1| cyclase/dehydrase [Mycobacterium vanbaalenii PYR-1]
Length=146
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/142 (44%), Positives = 90/142 (64%), Gaps = 1/142 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ S ++VIEA PE ILD +AD EA+ WS H+ E+++ DGRP VK VK G
Sbjct 1 MAVRASSEVVIEAPPEAILDALADIEAVASWSSLHKDAEVVDRYPDGRPHHVKATVKIMG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGD-NTLVQFEITVDPQVPLPGF 119
+TD++ + Y W D V W +++QR Q G+Y LT G+ T V+F++ +D P PGF
Sbjct 61 LTDKEFLEYHWGDDWVVWDAERTSRQRCQHGEYNLTSVGEQRTRVRFDLLLDLAAPYPGF 120
Query 120 VLKRAIKGTIDTATEALRSQVL 141
++KRA K +D A + LR +VL
Sbjct 121 LVKRAKKMVLDIALQNLRQRVL 142
>gi|308231655|ref|ZP_07413318.2| hypothetical protein TMAG_00793 [Mycobacterium tuberculosis SUMu001]
gi|308370140|ref|ZP_07420442.2| hypothetical protein TMBG_01763 [Mycobacterium tuberculosis SUMu002]
gi|308370519|ref|ZP_07421847.2| hypothetical protein TMCG_03113 [Mycobacterium tuberculosis SUMu003]
21 more sequence titles
Length=150
Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/146 (43%), Positives = 90/146 (62%), Gaps = 1/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MAI+ SR++VIEA PE I++ +AD +A+ WS H+ VE+++T DGRP VK+ +K AG
Sbjct 1 MAIRASREVVIEAPPEVIVEALADMDAVPSWSSVHKRVEVVDTYSDGRPHHVKVTIKVAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPK-GDNTLVQFEITVDPQVPLPGF 119
I D +++ Y W V W + QQ Q G+Y L + D T V+F +TV+P PLP F
Sbjct 61 IVDTELLEYHWGPDWVVWDAAKTAQQHGQHGEYNLRREDNDKTRVRFTLTVEPSAPLPAF 120
Query 120 VLKRAIKGTIDTATEALRSQVLKVKK 145
+ A K + ATE LR QV+ ++
Sbjct 121 WVNIARKKILHAATEGLRKQVVGRRR 146
>gi|340625871|ref|YP_004744323.1| hypothetical protein MCAN_08591 [Mycobacterium canettii CIPT
140010059]
gi|340004061|emb|CCC43197.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=157
Score = 124 bits (312), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 62/146 (43%), Positives = 90/146 (62%), Gaps = 1/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
+AI+ SR++VIEA PE I++ +AD +A+ WS H+ VE+++T DGRP VK+ +K AG
Sbjct 8 VAIRASREVVIEAPPEVIVEALADMDAVPSWSSVHKRVEVVDTYSDGRPHHVKVTIKVAG 67
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPK-GDNTLVQFEITVDPQVPLPGF 119
I D +++ Y W V W + QQ Q G+Y L + D T VQF +TV+P PLP F
Sbjct 68 IVDTELLEYHWGPDWVVWDAAKTAQQHGQHGEYNLRREDNDKTRVQFTLTVEPSAPLPAF 127
Query 120 VLKRAIKGTIDTATEALRSQVLKVKK 145
+ A K + ATE LR QV+ ++
Sbjct 128 WVNIARKKILHAATEGLRKQVVGRRR 153
>gi|240171438|ref|ZP_04750097.1| hypothetical protein MkanA1_19146 [Mycobacterium kansasii ATCC
12478]
Length=147
Score = 123 bits (309), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/143 (43%), Positives = 89/143 (63%), Gaps = 1/143 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
+A++ S +IVI+A PE I++ +AD +A+ WS H+ VE+++T DGRP VK+ VK G
Sbjct 3 VAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVVDTHPDGRPHHVKVTVKVTG 62
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKG-DNTLVQFEITVDPQVPLPGF 119
I D Q++ Y W + W + QQ Q G+Y L +G D T V+F +TV+P PLP F
Sbjct 63 IVDTQLLEYHWGPDWMVWDAHKTAQQHGQHGEYNLRREGEDKTRVRFTLTVEPSAPLPEF 122
Query 120 VLKRAIKGTIDTATEALRSQVLK 142
+KRA K + A E LR+ V+K
Sbjct 123 WIKRARKKILHAALEGLRNHVMK 145
>gi|15840270|ref|NP_335307.1| hypothetical protein MT0880 [Mycobacterium tuberculosis CDC1551]
gi|31792045|ref|NP_854538.1| hypothetical protein Mb0880 [Mycobacterium bovis AF2122/97]
gi|57116792|ref|NP_215372.2| hypothetical protein Rv0857 [Mycobacterium tuberculosis H37Rv]
52 more sequence titles
Length=157
Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/146 (42%), Positives = 90/146 (62%), Gaps = 1/146 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
+AI+ SR++VIEA PE I++ +AD +A+ WS H+ VE+++T DGRP VK+ +K AG
Sbjct 8 VAIRASREVVIEAPPEVIVEALADMDAVPSWSSVHKRVEVVDTYSDGRPHHVKVTIKVAG 67
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPK-GDNTLVQFEITVDPQVPLPGF 119
I D +++ Y W V W + QQ Q G+Y L + D T V+F +TV+P PLP F
Sbjct 68 IVDTELLEYHWGPDWVVWDAAKTAQQHGQHGEYNLRREDNDKTRVRFTLTVEPSAPLPAF 127
Query 120 VLKRAIKGTIDTATEALRSQVLKVKK 145
+ A K + ATE LR QV+ ++
Sbjct 128 WVNIARKKILHAATEGLRKQVVGRRR 153
>gi|145222271|ref|YP_001132949.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
gi|315442702|ref|YP_004075581.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
gi|145214757|gb|ABP44161.1| cyclase/dehydrase [Mycobacterium gilvum PYR-GCK]
gi|315261005|gb|ADT97746.1| polyketide cyclase / dehydrase family protein [Mycobacterium
sp. Spyr1]
Length=146
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 57/142 (41%), Positives = 91/142 (65%), Gaps = 1/142 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ S ++VIEA PE I+D +AD E++ WS H+ EI++ DGRP V+ VK G
Sbjct 1 MAVRASSELVIEAPPEAIMDALADIESVVSWSSLHKDAEIVDRHPDGRPHHVRATVKIMG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKG-DNTLVQFEITVDPQVPLPGF 119
++D++++ Y W D V W +++QR Q G+Y LTP G + T V+F++ +D P P F
Sbjct 61 LSDQEMLEYHWGDDWVVWDAEQTSRQRCQHGEYNLTPVGEERTRVRFDLILDLAAPYPTF 120
Query 120 VLKRAIKGTIDTATEALRSQVL 141
+++RA + +D A + LR +VL
Sbjct 121 LVRRAKQMVLDIALQNLRQRVL 142
>gi|296169612|ref|ZP_06851232.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895878|gb|EFG75573.1| cyclase/dehydrase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=149
Score = 120 bits (300), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/143 (42%), Positives = 89/143 (63%), Gaps = 1/143 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ S +IVI+A PE I++ +AD +A+ WSP H+ VE+++ DGRP VK+ + G
Sbjct 1 MAVQASSEIVIDAPPEVIMEALADMDAVPSWSPVHKRVEVIDKHPDGRPYHVKVTISVTG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKG-DNTLVQFEITVDPQVPLPGF 119
I D +++ Y W + W + QQR Q G+Y LT +G D T V+F ITV+P PLP F
Sbjct 61 IHDTELLEYHWGPDWMVWDAEKTAQQRGQHGEYTLTREGYDKTRVRFAITVEPFAPLPEF 120
Query 120 VLKRAIKGTIDTATEALRSQVLK 142
+ RA K + A E LR +V++
Sbjct 121 WVSRARKKILHAALEGLRRRVVE 143
>gi|326384683|ref|ZP_08206361.1| cyclase/dehydrase [Gordonia neofelifaecis NRRL B-59395]
gi|326196650|gb|EGD53846.1| cyclase/dehydrase [Gordonia neofelifaecis NRRL B-59395]
Length=144
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 88/140 (63%), Gaps = 0/140 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ S + ++A +++V+ D E++ EWS H+S +I+ DGRP++V + V G
Sbjct 1 MAVSASTEFDLKAPLSLVMEVLLDVESLPEWSGPHKSAKIVTEDADGRPARVDVSVSAVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
+TD Q + Y+WTD + W LV S Q Q G Y LT GD+T V+F++TVD ++ LPG +
Sbjct 61 MTDNQTLDYTWTDNTCTWDLVESDQLSEQHGVYTLTENGDSTHVKFDLTVDLKIKLPGLI 120
Query 121 LKRAIKGTIDTATEALRSQV 140
+KRA K +DTA + L +V
Sbjct 121 VKRAQKMAVDTAKKGLTEEV 140
>gi|262200730|ref|YP_003271938.1| cyclase/dehydrase [Gordonia bronchialis DSM 43247]
gi|262084077|gb|ACY20045.1| cyclase/dehydrase [Gordonia bronchialis DSM 43247]
Length=146
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 83/140 (60%), Gaps = 0/140 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA+ + + A P +++V+ D E++ EWS H+ EIL +DGRP +V+M V AG
Sbjct 1 MAVSAKTEFDVAAPPAVVMEVLMDIESLPEWSGPHKEAEILSEHEDGRPDQVRMVVTAAG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGFV 120
I+DEQ Y WTD + W LV S Q Q GKY ++ V+F + VD ++ LPG +
Sbjct 61 ISDEQTCNYEWTDTTCEWHLVESNQLSQQHGKYTVSETDKGAHVEFVLEVDLKIKLPGLI 120
Query 121 LKRAIKGTIDTATEALRSQV 140
+KRA K +DTA + L ++V
Sbjct 121 VKRAQKMAVDTAKKGLTAEV 140
>gi|311895583|dbj|BAJ27991.1| hypothetical protein KSE_21690 [Kitasatospora setae KM-6054]
Length=143
Score = 117 bits (294), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/141 (42%), Positives = 87/141 (62%), Gaps = 1/141 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA IVI+A+P E++ VIADF A +W+ + V++LETG DGR ++V++ +
Sbjct 1 MAEHTRSSIVIDATPAEVMAVIADFAAYPQWTGEVKEVDVLETGPDGRATRVRLLLDAGA 60
Query 61 ITDEQVVAYSW-TDRSVRWTLVSSTQQRSQDGKYELTPKGDNTLVQFEITVDPQVPLPGF 119
I DE +AY+W DR V WTLVSS R+ DG Y L P G T V +++ VD ++P+ G
Sbjct 61 IRDEHTLAYTWDGDREVGWTLVSSQMLRALDGSYALAPAGAGTEVTYQLAVDVKIPMLGM 120
Query 120 VLKRAIKGTIDTATEALRSQV 140
+ ++A K ID A L+ +V
Sbjct 121 IKRKAEKVIIDRALAGLKKRV 141
>gi|183984648|ref|YP_001852939.1| hypothetical protein MMAR_4680 [Mycobacterium marinum M]
gi|183177974|gb|ACC43084.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=154
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 54/141 (39%), Positives = 88/141 (63%), Gaps = 1/141 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
+A+K +R+ VI+A PE +++ + D + WSP H+SVE+++ DGRP VK +K G
Sbjct 4 VAVKAAREFVIDAPPEVVMEALTDVGVLVSWSPLHKSVEVIDYYPDGRPHHVKATIKILG 63
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKG-DNTLVQFEITVDPQVPLPGF 119
+ D++++ Y W V W + QQR Q +Y + P+G D + V+F+ITV+P P+PGF
Sbjct 64 LVDKEILEYHWGPDWVCWDADQTFQQRGQHVEYTVRPEGLDKSRVRFDITVEPSGPIPGF 123
Query 120 VLKRAIKGTIDTATEALRSQV 140
++KRA + +D A + L V
Sbjct 124 IVKRASEHVLDAAAKGLSELV 144
>gi|41406885|ref|NP_959721.1| hypothetical protein MAP0787 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395235|gb|AAS03104.1| hypothetical protein MAP_0787 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|336461193|gb|EGO40069.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium
avium subsp. paratuberculosis S397]
Length=151
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/142 (41%), Positives = 88/142 (62%), Gaps = 1/142 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ S +IVI+A PE I++ +AD +A+ WS H+ VE+++ DGRP V++ + G
Sbjct 1 MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDN-TLVQFEITVDPQVPLPGF 119
I D +++ Y W + W + QQ Q G+Y L+ GD+ T V+F ITV+P VPLP F
Sbjct 61 IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF 120
Query 120 VLKRAIKGTIDTATEALRSQVL 141
++RA K + A E LR +V+
Sbjct 121 WVRRARKKILHAALEGLRKRVM 142
>gi|118467176|ref|YP_880238.1| hypothetical protein MAV_0978 [Mycobacterium avium 104]
gi|118168463|gb|ABK69360.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=151
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/142 (41%), Positives = 88/142 (62%), Gaps = 1/142 (0%)
Query 1 MAIKESRDIVIEASPEEILDVIADFEAMTEWSPAHQSVEILETGDDGRPSKVKMKVKTAG 60
MA++ S +IVI+A PE I++ +AD +A+ WS H+ VE+++ DGRP V++ + G
Sbjct 1 MAVQASSEIVIDAPPEVIMEALADMDAVPSWSSVHKRVEVIDKHPDGRPHHVRVTIAVVG 60
Query 61 ITDEQVVAYSWTDRSVRWTLVSSTQQRSQDGKYELTPKGDN-TLVQFEITVDPQVPLPGF 119
I D +++ Y W + W + QQ Q G+Y L+ GD+ T V+F ITV+P VPLP F
Sbjct 61 IHDTELLEYHWGPDWMVWDADRTAQQHGQHGEYNLSRLGDDKTRVRFTITVEPWVPLPEF 120
Query 120 VLKRAIKGTIDTATEALRSQVL 141
++RA K + A E LR +V+
Sbjct 121 WVRRARKKILHAALEGLRKRVM 142
Lambda K H
0.312 0.129 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 131150363096
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40