BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0861c Length=542 Score E Sequences producing significant alignments: (Bits) Value gi|308397334|ref|ZP_07492493.2| DNA helicase ercc3 [Mycobacteriu... 1097 0.0 gi|294996341|ref|ZP_06802032.1| DNA helicase ercc3 [Mycobacteriu... 1097 0.0 gi|148660638|ref|YP_001282161.1| putative ATP-dependent DNA heli... 1095 0.0 gi|167966812|ref|ZP_02549089.1| DNA helicase ercc3 [Mycobacteriu... 1093 0.0 gi|31792049|ref|NP_854542.1| DNA helicase [Mycobacterium bovis A... 1093 0.0 gi|289442270|ref|ZP_06432014.1| DNA helicase ercc3 [Mycobacteriu... 1092 0.0 gi|15840274|ref|NP_335311.1| ATP-dependent DNA helicase, putativ... 1092 0.0 gi|340625875|ref|YP_004744327.1| putative DNA helicase ERCC3 [My... 1088 0.0 gi|289749381|ref|ZP_06508759.1| DNA helicase ercc3 [Mycobacteriu... 1071 0.0 gi|254231169|ref|ZP_04924496.1| DNA helicase ercc3 [Mycobacteriu... 1046 0.0 gi|240171425|ref|ZP_04750084.1| DNA or RNA helicase of superfami... 1014 0.0 gi|118466248|ref|YP_880250.1| DNA or RNA helicase of superfamily... 1013 0.0 gi|41406897|ref|NP_959733.1| hypothetical protein MAP0799c [Myco... 1012 0.0 gi|254818296|ref|ZP_05223297.1| DNA or RNA helicase of superfami... 1009 0.0 gi|296169623|ref|ZP_06851243.1| DNA or RNA helicase of superfami... 1005 0.0 gi|342860474|ref|ZP_08717125.1| DNA or RNA helicase of superfami... 1004 0.0 gi|15828157|ref|NP_302420.1| DNA helicase [Mycobacterium leprae ... 1002 0.0 gi|183984638|ref|YP_001852929.1| DNA helicase Ercc3 [Mycobacteri... 998 0.0 gi|118616163|ref|YP_904495.1| DNA helicase Ercc3 [Mycobacterium ... 993 0.0 gi|333989429|ref|YP_004522043.1| DNA helicase Ercc3 [Mycobacteri... 983 0.0 gi|169627959|ref|YP_001701608.1| DNA helicase [Mycobacterium abs... 981 0.0 gi|120406004|ref|YP_955833.1| type III restriction enzyme, res s... 979 0.0 gi|118468039|ref|YP_889939.1| DNA or RNA helicase of superfamily... 979 0.0 gi|289568824|ref|ZP_06449051.1| DNA helicase ercc3 [Mycobacteriu... 974 0.0 gi|315442723|ref|YP_004075602.1| DNA/RNA helicase, superfamily I... 974 0.0 gi|145222289|ref|YP_001132967.1| type III restriction enzyme, re... 971 0.0 gi|108801448|ref|YP_641645.1| type III restriction enzyme, res s... 968 0.0 gi|54022596|ref|YP_116838.1| putative DNA helicase [Nocardia far... 964 0.0 gi|229488859|ref|ZP_04382725.1| DNA or RNA helicase of superfami... 958 0.0 gi|226308134|ref|YP_002768094.1| ATP-dependent DNA helicase [Rho... 957 0.0 gi|226364428|ref|YP_002782210.1| ATP-dependent DNA helicase [Rho... 950 0.0 gi|312138404|ref|YP_004005740.1| ATP-dependent DNA helicase [Rho... 947 0.0 gi|111021918|ref|YP_704890.1| DNA repair helicase [Rhodococcus j... 947 0.0 gi|325674600|ref|ZP_08154287.1| DNA repair helicase [Rhodococcus... 947 0.0 gi|333918492|ref|YP_004492073.1| DNA repair helicase [Amycolicic... 938 0.0 gi|343928179|ref|ZP_08767634.1| putative ATP-dependent DNA helic... 927 0.0 gi|262201196|ref|YP_003272404.1| helicase [Gordonia bronchialis ... 927 0.0 gi|326384180|ref|ZP_08205862.1| helicase domain-containing prote... 921 0.0 gi|331699464|ref|YP_004335703.1| type III restriction protein re... 917 0.0 gi|319948963|ref|ZP_08023067.1| ATP-dependent DNA helicase [Diet... 911 0.0 gi|257057395|ref|YP_003135227.1| DNA/RNA helicase, superfamily I... 911 0.0 gi|296138541|ref|YP_003645784.1| type III restriction protein re... 907 0.0 gi|324998370|ref|ZP_08119482.1| DNA/RNA helicase, superfamily II... 907 0.0 gi|134097156|ref|YP_001102817.1| ATP-dependent DNA helicase [Sac... 907 0.0 gi|256374606|ref|YP_003098266.1| type III restriction protein re... 903 0.0 gi|300790353|ref|YP_003770644.1| DNA excision repair protein [Am... 899 0.0 gi|302530595|ref|ZP_07282937.1| DNA helicase [Streptomyces sp. A... 891 0.0 gi|284989384|ref|YP_003407938.1| type III restriction protein re... 882 0.0 gi|288920789|ref|ZP_06415088.1| helicase domain protein [Frankia... 882 0.0 gi|258654903|ref|YP_003204059.1| helicase domain-containing prot... 881 0.0 >gi|308397334|ref|ZP_07492493.2| DNA helicase ercc3 [Mycobacterium tuberculosis SUMu012] gi|308366928|gb|EFP55779.1| DNA helicase ercc3 [Mycobacterium tuberculosis SUMu012] Length=544 Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 3 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 62 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 63 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 122 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 123 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 182 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 183 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 242 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 243 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 302 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 303 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 362 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 363 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 422 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 423 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 482 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 483 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 542 Query 541 AI 542 AI Sbjct 543 AI 544 >gi|294996341|ref|ZP_06802032.1| DNA helicase ercc3 [Mycobacterium tuberculosis 210] gi|297633378|ref|ZP_06951158.1| DNA helicase ercc3 [Mycobacterium tuberculosis KZN 4207] gi|308371780|ref|ZP_07426215.2| hypothetical protein TMDG_02629 [Mycobacterium tuberculosis SUMu004] gi|345461995|ref|NP_215376.2| DNA helicase ErcC3 [Mycobacterium tuberculosis H37Rv] gi|308335490|gb|EFP24341.1| hypothetical protein TMDG_02629 [Mycobacterium tuberculosis SUMu004] gi|339297516|gb|AEJ49626.1| DNA helicase ercc3 [Mycobacterium tuberculosis CCDC5180] Length=549 Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust. Identities = 542/542 (100%), Positives = 542/542 (100%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 128 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 188 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 368 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|148660638|ref|YP_001282161.1| putative ATP-dependent DNA helicase [Mycobacterium tuberculosis H37Ra] gi|148822069|ref|YP_001286823.1| DNA helicase ercc3 [Mycobacterium tuberculosis F11] gi|253800117|ref|YP_003033118.1| DNA helicase ercc3 [Mycobacterium tuberculosis KZN 1435] 49 more sequence titles Length=542 Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust. Identities = 541/542 (99%), Positives = 542/542 (100%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|167966812|ref|ZP_02549089.1| DNA helicase ercc3 [Mycobacterium tuberculosis H37Ra] Length=542 Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/542 (99%), Positives = 541/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQ STRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQVSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|31792049|ref|NP_854542.1| DNA helicase [Mycobacterium bovis AF2122/97] gi|121636784|ref|YP_977007.1| putative DNA helicase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989255|ref|YP_002643942.1| putative DNA helicase [Mycobacterium bovis BCG str. Tokyo 172] gi|31617636|emb|CAD93746.1| PROBABLE DNA HELICASE [Mycobacterium bovis AF2122/97] gi|121492431|emb|CAL70899.1| Probable dna helicase [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772368|dbj|BAH25174.1| putative DNA helicase [Mycobacterium bovis BCG str. Tokyo 172] gi|341600800|emb|CCC63471.1| probable DNA helicase [Mycobacterium bovis BCG str. Moreau RDJ] Length=542 Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/542 (99%), Positives = 541/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRP TISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPATISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|289442270|ref|ZP_06432014.1| DNA helicase ercc3 [Mycobacterium tuberculosis T46] gi|289415189|gb|EFD12429.1| DNA helicase ercc3 [Mycobacterium tuberculosis T46] Length=542 Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/542 (99%), Positives = 541/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITR TKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRHTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|15840274|ref|NP_335311.1| ATP-dependent DNA helicase, putative [Mycobacterium tuberculosis CDC1551] gi|13880434|gb|AAK45125.1| ATP-dependent DNA helicase, putative [Mycobacterium tuberculosis CDC1551] Length=542 Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust. Identities = 540/542 (99%), Positives = 541/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGE ATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEXATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|340625875|ref|YP_004744327.1| putative DNA helicase ERCC3 [Mycobacterium canettii CIPT 140010059] gi|340004065|emb|CCC43201.1| putative DNA helicase ERCC3 [Mycobacterium canettii CIPT 140010059] Length=542 Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust. Identities = 538/542 (99%), Positives = 540/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKK+AP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKVAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TEIEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELDAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|289749381|ref|ZP_06508759.1| DNA helicase ercc3 [Mycobacterium tuberculosis T92] gi|289689968|gb|EFD57397.1| DNA helicase ercc3 [Mycobacterium tuberculosis T92] Length=531 Score = 1071 bits (2771), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/531 (99%), Positives = 530/531 (99%), Gaps = 0/531 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITR TKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRHTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYII 531 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYII Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYII 531 >gi|254231169|ref|ZP_04924496.1| DNA helicase ercc3 [Mycobacterium tuberculosis C] gi|124600228|gb|EAY59238.1| DNA helicase ercc3 [Mycobacterium tuberculosis C] Length=582 Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust. Identities = 517/520 (99%), Positives = 519/520 (99%), Gaps = 0/520 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVD VDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 61 DALVSYSRYAVPQPLLVDTVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR Sbjct 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA Sbjct 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQR 520 EEAQRLGRILRPKADGGGAIFYSVVARDS+DAEYAAHRQR Sbjct 481 EEAQRLGRILRPKADGGGAIFYSVVARDSVDAEYAAHRQR 520 >gi|240171425|ref|ZP_04750084.1| DNA or RNA helicase of superfamily protein II [Mycobacterium kansasii ATCC 12478] Length=549 Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust. Identities = 515/542 (96%), Positives = 535/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDH+LAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHDLAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTL+SLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLLSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARID+DTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLH++GWQLRDYQ+ Sbjct 128 MLGARIDEDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHEDGWQLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +A DSFW+GGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTNIVAARQWKRELVARTSL Sbjct 188 MATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 T++EIGE+SGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TDDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKD+EAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDVEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM YATAEPEERYR+CSTVHTKIAVVKSIL KHP EQTLVIGAYLDQL+ELG Sbjct 368 VTMTDNERMQYATAEPEERYRLCSTVHTKIAVVKSILGKHPGEQTLVIGAYLDQLEELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGSTRTSEREALFDAFRRGE+ATLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTRTSEREALFDAFRRGEIATLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|118466248|ref|YP_880250.1| DNA or RNA helicase of superfamily protein II [Mycobacterium avium 104] gi|254773876|ref|ZP_05215392.1| DNA or RNA helicase of superfamily protein II [Mycobacterium avium subsp. avium ATCC 25291] gi|118167535|gb|ABK68432.1| DNA or RNA helicase of superfamily protein II [Mycobacterium avium 104] Length=549 Score = 1013 bits (2618), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/542 (96%), Positives = 534/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPISL ++GWQLRDYQ+ Sbjct 128 MLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLTEDGWQLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELV RTSL Sbjct 188 MAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVTRTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERMMYATAEPEERYR+CSTVHTKIAVVKSIL KHP EQTLVIGAYLDQLDELG Sbjct 368 VTMTDNERMMYATAEPEERYRLCSTVHTKIAVVKSILDKHPGEQTLVIGAYLDQLDELGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 +LGAPVIQGSTRT ERE LFDAFRRGEV TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 QLGAPVIQGSTRTKEREELFDAFRRGEVNTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGGGA+FYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|41406897|ref|NP_959733.1| hypothetical protein MAP0799c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395247|gb|AAS03116.1| hypothetical protein MAP_0799c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461259|gb|EGO40134.1| DNA/RNA helicase, superfamily II [Mycobacterium avium subsp. paratuberculosis S397] Length=549 Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust. Identities = 518/542 (96%), Positives = 535/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPISL ++GWQLRDYQ+ Sbjct 128 MLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLTEDGWQLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL Sbjct 188 MAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTISTYQMITRRT+GEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTISTYQMITRRTRGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERMMYATAEPEERYR+CSTVHTKIAVVKSIL KHP EQTLVIGAYLDQLDELG Sbjct 368 VTMTDNERMMYATAEPEERYRLCSTVHTKIAVVKSILDKHPGEQTLVIGAYLDQLDELGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 +LGAPVIQGSTRT ERE LFDAFRRGEV TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 QLGAPVIQGSTRTKEREELFDAFRRGEVNTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGGGA+FYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|254818296|ref|ZP_05223297.1| DNA or RNA helicase of superfamily protein II [Mycobacterium intracellulare ATCC 13950] Length=549 Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust. Identities = 516/542 (96%), Positives = 532/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEV+HE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVEHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRN KIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNNKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPISL Q+GW LRDYQ+ Sbjct 128 MLGARIDDDTVIVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGWHLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +A DSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKREL+ARTSL Sbjct 188 MATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERMMYATAEPEERY++CSTVHTKIAVVKSILAKHP EQTLVIGAYLDQLDELGA Sbjct 368 VTMTDNERMMYATAEPEERYKLCSTVHTKIAVVKSILAKHPGEQTLVIGAYLDQLDELGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 ELGAPVIQGSTRT ERE LFD FRRGEV TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 ELGAPVIQGSTRTKEREELFDGFRRGEVNTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|296169623|ref|ZP_06851243.1| DNA or RNA helicase of superfamily protein II [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895889|gb|EFG75584.1| DNA or RNA helicase of superfamily protein II [Mycobacterium parascrofulaceum ATCC BAA-614] Length=549 Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/542 (95%), Positives = 532/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPISL Q+GW LRDYQ+ Sbjct 128 MLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGWHLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +A DSFW+GGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTN+VAARQWKRELVARTSL Sbjct 188 MATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKASATTLILVTNVVAARQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+E+GE+SGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEVGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERMMYATAEPEERY++CST H+KIAVVKS+L++HP EQTLVIGAYLDQLDELGA Sbjct 368 VTMTDNERMMYATAEPEERYKLCSTAHSKIAVVKSVLSRHPGEQTLVIGAYLDQLDELGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGSTRT ERE LFDAFRRGEV+TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTRTKEREELFDAFRRGEVSTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|342860474|ref|ZP_08717125.1| DNA or RNA helicase of superfamily protein II [Mycobacterium colombiense CECT 3035] gi|342132129|gb|EGT85370.1| DNA or RNA helicase of superfamily protein II [Mycobacterium colombiense CECT 3035] Length=549 Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/542 (95%), Positives = 534/542 (99%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPISL Q+GW LRDYQ+ Sbjct 128 MLGARIDDDTVIVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPISLAQDGWHLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +A DSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKREL+ARTSL Sbjct 188 MATDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 +E+EIGE+SGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 SEDEIGEYSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM+YATAEPEERY++CSTVHTKIAVVKSILAKHP EQTLVIGAYLDQLDELGA Sbjct 368 VTMTDNERMLYATAEPEERYKLCSTVHTKIAVVKSILAKHPGEQTLVIGAYLDQLDELGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGSTRT ERE LFDAFRRGE++TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTRTKEREELFDAFRRGELSTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|15828157|ref|NP_302420.1| DNA helicase [Mycobacterium leprae TN] gi|221230634|ref|YP_002504050.1| putative DNA helicase [Mycobacterium leprae Br4923] gi|13093711|emb|CAC31112.1| probable DNA helicase [Mycobacterium leprae] gi|219933741|emb|CAR72254.1| probable DNA helicase [Mycobacterium leprae Br4923] Length=549 Score = 1002 bits (2591), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/542 (92%), Positives = 522/542 (97%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEV+H+LA AARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVNHKLADAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 D L+S++RYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDR VLEEVL NKKIAP Sbjct 68 DTLISHARYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRTVLEEVLHNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 M+G RIDDDTVVVHPSERGR+KQLLLKIGWPAEDLAGYVDGEAHPI LHQ+GWQLRDYQR Sbjct 128 MVGGRIDDDTVVVHPSERGRIKQLLLKIGWPAEDLAGYVDGEAHPIILHQDGWQLRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFW+GGSGVVVLPCGAGKTLVGAAAMAK GATTLILVTNIV ARQWKREL+ TSL Sbjct 188 LAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKTGATTLILVTNIVVARQWKRELITHTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTISTYQMIT RTKGEYRHLELF+SRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTISTYQMITHRTKGEYRHLELFNSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYD PWKD+E QGWIAPA+CVEVR Sbjct 308 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDTPWKDLEEQGWIAPAKCVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+T++ERM YATAEPEERYR+CST H+KIAVVKS+L++HP EQTLVIGAYLDQL+ELG+ Sbjct 368 VTLTNNERMTYATAEPEERYRVCSTAHSKIAVVKSVLSRHPGEQTLVIGAYLDQLNELGS 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL AP+IQGSTRT EREALFDAFRRGEV TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 ELNAPIIQGSTRTKEREALFDAFRRGEVFTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGY YIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYSYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|183984638|ref|YP_001852929.1| DNA helicase Ercc3 [Mycobacterium marinum M] gi|183177964|gb|ACC43074.1| DNA helicase Ercc3 [Mycobacterium marinum M] Length=549 Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/542 (94%), Positives = 530/542 (98%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTL+SLDRAVLEEVLRNKKIAP Sbjct 68 DALVTHSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLISLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VHPSERGRVKQLLLKIGWPAEDLAGYV+GEAHPISL +GW+LRDYQ+ Sbjct 128 MLGARIDDDTVIVHPSERGRVKQLLLKIGWPAEDLAGYVNGEAHPISLQPDGWELRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LA DSFWAGGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTNIVAARQWKRELVARTSL Sbjct 188 LATDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTISTYQMITRR+KGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTISTYQMITRRSKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERM YATAEPEERYR+CSTVHTKIAVVKSIL +HP EQTLVIGAYLDQL+ELG Sbjct 368 VTMTDSERMTYATAEPEERYRLCSTVHTKIAVVKSILQRHPGEQTLVIGAYLDQLEELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQG+T+T EREALFDAFRRGE+ATLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELDAPVIQGATKTREREALFDAFRRGEIATLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGGGA+FYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGGAMFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|118616163|ref|YP_904495.1| DNA helicase Ercc3 [Mycobacterium ulcerans Agy99] gi|118568273|gb|ABL03024.1| DNA helicase Ercc3 [Mycobacterium ulcerans Agy99] Length=542 Score = 993 bits (2567), Expect = 0.0, Method: Compositional matrix adjust. Identities = 506/542 (94%), Positives = 529/542 (98%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 +QSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 1 MQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTL+SLDRAVLEEVLRNKKIAP Sbjct 61 DALVTHSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLISLDRAVLEEVLRNKKIAP 120 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VHPSERGRVKQLLLKIGWPAEDLAGYV+GEAHPISL +GW+LRDYQ+ Sbjct 121 MLGARIDDDTVIVHPSERGRVKQLLLKIGWPAEDLAGYVNGEAHPISLQPDGWELRDYQQ 180 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LA DSFWAGGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTNIVAARQWKRELVARTSL Sbjct 181 LATDSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNIVAARQWKRELVARTSL 240 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTISTYQMITRR+KGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 241 TEEEIGEYSGERKEIRPVTISTYQMITRRSKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTDSERM YATAEPEERYR+CSTVHTKIAVVKSIL +HP EQTLVIGAYLDQL+ELG Sbjct 361 VTMTDSERMAYATAEPEERYRLCSTVHTKIAVVKSILQRHPGEQTLVIGAYLDQLEELGT 420 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQG+T+T EREALFDAFRRGE+ATLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 421 ELDAPVIQGATKTREREALFDAFRRGEIATLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 480 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGG A+FYSVVARDSLD+EYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 481 EEAQRLGRLLRPKSDGGRAMFYSVVARDSLDSEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 Query 541 AI 542 AI Sbjct 541 AI 542 >gi|333989429|ref|YP_004522043.1| DNA helicase Ercc3 [Mycobacterium sp. JDM601] gi|333485397|gb|AEF34789.1| DNA helicase Ercc3 [Mycobacterium sp. JDM601] Length=550 Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust. Identities = 501/542 (93%), Positives = 528/542 (98%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 9 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 68 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+P HGLTLVSLDRAVLEEVLRNKKIAP Sbjct 69 DALVSHSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLEEVLRNKKIAP 128 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGRVKQ+LLKIGWPAEDLAGYVDGEAHPI+L Q+GWQLRDYQ Sbjct 129 MLGARIDDDTVVVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIALCQDGWQLRDYQE 188 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTN VA RQWKREL+ARTSL Sbjct 189 MAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRELIARTSL 248 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 249 TEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 308 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 309 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 368 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMT+SERM YA AEPEERY++CSTVH+KIAVV+SIL +HP EQTLVIGAYLDQL+ELG Sbjct 369 VTMTESERMTYAIAEPEERYKLCSTVHSKIAVVRSILKQHPGEQTLVIGAYLDQLEELGE 428 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 +L APVIQGSTRT+ERE LFDAFR+GEV+TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 429 QLDAPVIQGSTRTAEREKLFDAFRKGEVSTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 488 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGA+FYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP Sbjct 489 EEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 548 Query 541 AI 542 AI Sbjct 549 AI 550 >gi|169627959|ref|YP_001701608.1| DNA helicase [Mycobacterium abscessus ATCC 19977] gi|169239926|emb|CAM60954.1| Probable DNA helicase [Mycobacterium abscessus] Length=550 Score = 981 bits (2535), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/542 (90%), Positives = 518/542 (96%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDH+ A AAR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHDQADAARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVSLDRAVLEEVLR+KKIAP Sbjct 68 DALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVLRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 M GARIDDDT+ VHPSERGR+KQ+LLKIGWPAEDLAGYVDGEAHPI+L Q+GW+LRDYQ+ Sbjct 128 MFGARIDDDTIQVHPSERGRIKQMLLKIGWPAEDLAGYVDGEAHPITLAQDGWELRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFWAGGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTN VA RQWKREL+ARTSL Sbjct 188 MAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTVAGRQWKRELLARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEYRHLELFDSRDWGLI+YDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 308 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ERM+YATAE +ERY++CST HTKI VVKSILA+HP TLVIGAYLDQLDELG Sbjct 368 VTLTDNERMIYATAEADERYKLCSTAHTKINVVKSILARHPGAPTLVIGAYLDQLDELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +EREALFDAFRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELDAPVIQGSTKNAEREALFDAFRRGEIGTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGG A FYSVV+RD+LDAEYAAHRQRFLAEQGYGY I DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGQAYFYSVVSRDTLDAEYAAHRQRFLAEQGYGYRITDADDLLGP 547 Query 541 AI 542 I Sbjct 548 TI 549 >gi|120406004|ref|YP_955833.1| type III restriction enzyme, res subunit [Mycobacterium vanbaalenii PYR-1] gi|119958822|gb|ABM15827.1| type III restriction enzyme, res subunit [Mycobacterium vanbaalenii PYR-1] Length=549 Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust. Identities = 497/542 (92%), Positives = 526/542 (98%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVS DRAVLEEVLRNKKIAP Sbjct 68 DALVTFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGAR+DDDTV+VH SERGRVKQ+LLKIGWPAEDLAGYVDGEAHPI L Q+GWQLRDYQ+ Sbjct 128 MLGARLDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIELAQDGWQLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTN VA RQWKRELVARTSL Sbjct 188 MAADSFWDGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERMMYATAEP+ERY++C+T HTKIAVVKSIL +HPDE TLVIGAYLDQLDELG Sbjct 368 VTMTDNERMMYATAEPDERYKLCATAHTKIAVVKSILERHPDEPTLVIGAYLDQLDELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +EREALFDAFRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTKNAEREALFDAFRRGEIRTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGA+FYSVV+RDSLDAEYAAHRQRFLAEQGYGY+I+DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|118468039|ref|YP_889939.1| DNA or RNA helicase of superfamily protein II [Mycobacterium smegmatis str. MC2 155] gi|118169326|gb|ABK70222.1| DNA or RNA helicase of superfamily protein II [Mycobacterium smegmatis str. MC2 155] Length=585 Score = 979 bits (2530), Expect = 0.0, Method: Compositional matrix adjust. Identities = 495/542 (92%), Positives = 528/542 (98%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 44 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 103 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRY VPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVS DRAVLEEVLRNKKIAP Sbjct 104 DALVSFSRYPVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVLRNKKIAP 163 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VH SERGRVKQ+LLKIGWPAEDLAGYVDGEAHPI+L Q+GW LRDYQ Sbjct 164 MLGARIDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPITLEQDGWALRDYQE 223 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTN VA RQWKRELVARTSL Sbjct 224 MAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRELVARTSL 283 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGE+KEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGLIIYDEVHLLPAPV Sbjct 284 TEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIIYDEVHLLPAPV 343 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 344 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 403 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM+YAT+EP+ERY++CSTVHTKIAVV+SIL +HP+E TLVIGAYLDQL+ELG Sbjct 404 VTMTDNERMLYATSEPDERYKLCSTVHTKIAVVRSILERHPNEPTLVIGAYLDQLEELGQ 463 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +EREALFDAFRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 464 ELDAPVIQGSTKNAEREALFDAFRRGEIRTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 523 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGA+FYSVV+RDSLDAEYAAHRQRFLAEQGYGYII+DADDLLGP Sbjct 524 EEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYIIKDADDLLGP 583 Query 541 AI 542 AI Sbjct 584 AI 585 >gi|289568824|ref|ZP_06449051.1| DNA helicase ercc3 [Mycobacterium tuberculosis T17] gi|289542578|gb|EFD46226.1| DNA helicase ercc3 [Mycobacterium tuberculosis T17] Length=510 Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust. Identities = 481/483 (99%), Positives = 482/483 (99%), Gaps = 0/483 (0%) Query 30 ERAPEHVHTYRITPLALWNARAAGHDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRL 89 +RAPEHVHTYRITPLALWNARAAGHDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRL Sbjct 18 KRAPEHVHTYRITPLALWNARAAGHDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRL 77 Query 90 QLVKNPAHGLTLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVVVHPSERGRVKQLLLKIG 149 QLVKNPAHGLTLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVVVHPSERGRVKQLLLKIG Sbjct 78 QLVKNPAHGLTLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVVVHPSERGRVKQLLLKIG 137 Query 150 WPAEDLAGYVDGEAHPISLHQEGWQLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAA 209 WPAEDLAGYVDGEAHPISLHQEGWQLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAA Sbjct 138 WPAEDLAGYVDGEAHPISLHQEGWQLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAA 197 Query 210 MAKAGATTLILVTNIVAARQWKRELVARTSLTENEIGEFSGERKEIRPVTISTYQMITRR 269 MAKAGATTLILVTNIVAARQWKRELVARTSLTENEIGEFSGERKEIRPVTISTYQMITR Sbjct 198 MAKAGATTLILVTNIVAARQWKRELVARTSLTENEIGEFSGERKEIRPVTISTYQMITRH 257 Query 270 TKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDV 329 TKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDV Sbjct 258 TKGEYRHLELFDSRDWGLIIYDEVHLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDV 317 Query 330 FSLIGPKRYDAPWKDIEAQGWIAPAECVEVRVTMTDSERMMYATAEPEERYRICSTVHTK 389 FSLIGPKRYDAPWKDIEAQGWIAPAECVEVRVTMTDSERMMYATAEPEERYRICSTVHTK Sbjct 318 FSLIGPKRYDAPWKDIEAQGWIAPAECVEVRVTMTDSERMMYATAEPEERYRICSTVHTK 377 Query 390 IAVVKSILAKHPDEQTLVIGAYLDQLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVA 449 IAVVKSILAKHPDEQTLVIGAYLDQLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVA Sbjct 378 IAVVKSILAKHPDEQTLVIGAYLDQLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVA 437 Query 450 TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDS 509 TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDS Sbjct 438 TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDS 497 Query 510 LDA 512 LDA Sbjct 498 LDA 500 >gi|315442723|ref|YP_004075602.1| DNA/RNA helicase, superfamily II [Mycobacterium sp. Spyr1] gi|315261026|gb|ADT97767.1| DNA/RNA helicase, superfamily II [Mycobacterium sp. Spyr1] Length=549 Score = 974 bits (2517), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/542 (91%), Positives = 525/542 (97%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEH+HTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVS DRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGAR+DDDTV+VH SERGRVKQ+LLKIGWPAEDLAGYVDGEAHPI+L Q+GW+LRDYQ+ Sbjct 128 MLGARLDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIALEQDGWELRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW GGSGVVVLPCGAGKTLVGAAAMA+AGATTLILVTN VA RQWKREL+ART+L Sbjct 188 MAADSFWDGGSGVVVLPCGAGKTLVGAAAMARAGATTLILVTNTVAGRQWKRELIARTTL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGLI+YDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM+YATAEPEERY++C+T HTKIAVVKSIL +HPDE TLVIGAYLDQLDELG Sbjct 368 VTMTDNERMLYATAEPEERYKLCATAHTKIAVVKSILDRHPDEPTLVIGAYLDQLDELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +ERE LFD FRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTKNAEREELFDGFRRGEIRTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGA+FYSVV+RDSLDAEYAAHRQRFLAEQGYGY+I+DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|145222289|ref|YP_001132967.1| type III restriction enzyme, res subunit [Mycobacterium gilvum PYR-GCK] gi|145214775|gb|ABP44179.1| type III restriction enzyme, res subunit [Mycobacterium gilvum PYR-GCK] Length=549 Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust. Identities = 488/542 (91%), Positives = 524/542 (97%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE AGAARAAIAPFAELERAPEH+HTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAGAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVS DRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSFDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGAR+DDDTV+VH SERGRVKQ+LLKIGWPAEDLAGYVDGEAHPI+L Q+GW+LRDYQ+ Sbjct 128 MLGARLDDDTVIVHNSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIALEQDGWELRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW GGSGVVVLPCGAGKTLVGAAAMA+AGATTLILVTN VA RQWKREL+ART+L Sbjct 188 MAADSFWDGGSGVVVLPCGAGKTLVGAAAMARAGATTLILVTNTVAGRQWKRELIARTTL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGLI+YDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLIVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM+YATAEPEERY++C+T HTKIAVVKSIL +HP+E TLVIGAYLDQLDELG Sbjct 368 VTMTDNERMLYATAEPEERYKLCATAHTKIAVVKSILDRHPNEPTLVIGAYLDQLDELGT 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +ERE LFD FRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELNAPVIQGSTKNAEREELFDGFRRGEIRTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADGGGA+FYSVV+RDSLDAEYAAHRQRFLAEQGYGY+I+DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGP 547 Query 541 AI 542 I Sbjct 548 TI 549 >gi|108801448|ref|YP_641645.1| type III restriction enzyme, res subunit [Mycobacterium sp. MCS] gi|119870601|ref|YP_940553.1| type III restriction enzyme, res subunit [Mycobacterium sp. KMS] gi|126437433|ref|YP_001073124.1| type III restriction enzyme, res subunit [Mycobacterium sp. JLS] gi|108771867|gb|ABG10589.1| type III restriction enzyme, res subunit [Mycobacterium sp. MCS] gi|119696690|gb|ABL93763.1| type III restriction enzyme, res subunit [Mycobacterium sp. KMS] gi|126237233|gb|ABO00634.1| type III restriction enzyme, res subunit [Mycobacterium sp. JLS] Length=549 Score = 968 bits (2502), Expect = 0.0, Method: Compositional matrix adjust. Identities = 489/542 (91%), Positives = 521/542 (97%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHE A AARAAIAPFAELERAPEH+HTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHEQAQAARAAIAPFAELERAPEHIHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SRYAVPQPLLVDIVDTMARYGRLQLVK+P HGL LVSLDRAVLEEVLRNKKIAP Sbjct 68 DALVSFSRYAVPQPLLVDIVDTMARYGRLQLVKSPVHGLVLVSLDRAVLEEVLRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VH SERGRVKQ+LLKIGWPAEDLAGYVDGE HPI L Q+GWQLRDYQ Sbjct 128 MLGARIDDDTVIVHASERGRVKQMLLKIGWPAEDLAGYVDGERHPIDLLQDGWQLRDYQE 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFW+GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTN VA RQWKRELVARTSL Sbjct 188 MAADSFWSGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVAGRQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGE+KEIRPVTI+TYQ+ITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGEKKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 308 FRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD+ERM+YA AEPEERY++CSTVHTKIAVV+SIL +H EQTLVIGAYLDQL+ELG Sbjct 368 VTMTDNERMLYAVAEPEERYKLCSTVHTKIAVVRSILERHKGEQTLVIGAYLDQLEELGQ 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ +ERE LFD FRRGE++TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELDAPVIQGSTKNAERELLFDQFRRGEISTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DGGGA+FYSVV+RDSLDAEYAAHRQRFLAEQGYGY+I+DADDLLGP Sbjct 488 EEAQRLGRLLRPKHDGGGAVFYSVVSRDSLDAEYAAHRQRFLAEQGYGYVIKDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|54022596|ref|YP_116838.1| putative DNA helicase [Nocardia farcinica IFM 10152] gi|54014104|dbj|BAD55474.1| putative DNA helicase [Nocardia farcinica IFM 10152] Length=552 Score = 964 bits (2493), Expect = 0.0, Method: Compositional matrix adjust. Identities = 480/544 (89%), Positives = 512/544 (95%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHESADMARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVK+PAHGLTLVSLDRAVLEEVLR+KKIAP Sbjct 68 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEVLRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEG--WQLRDY 178 MLGARIDDDTV VHPSERGR+KQ+LLKIGWPAEDLAGYVDGEAHPI L EG W+LRDY Sbjct 128 MLGARIDDDTVAVHPSERGRIKQMLLKIGWPAEDLAGYVDGEAHPIELDYEGGHWKLRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQW+REL+ART Sbjct 188 QEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWRRELLART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE+EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+E Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVT+TD+ERM YATAEPEERY++CST TKI VV+SILAKHPD TLVIGAYL+Q++EL Sbjct 368 VRVTLTDAERMAYATAEPEERYKLCSTARTKIPVVESILAKHPDAPTLVIGAYLEQIEEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 GA L APVIQGST+ EREALFDAFRRGE+ LVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GAALDAPVIQGSTKNKEREALFDAFRRGEIPVLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRITDADDLL 547 Query 539 GPAI 542 GPAI Sbjct 548 GPAI 551 >gi|229488859|ref|ZP_04382725.1| DNA or RNA helicase of superfamily II [Rhodococcus erythropolis SK121] gi|229324363|gb|EEN90118.1| DNA or RNA helicase of superfamily II [Rhodococcus erythropolis SK121] Length=552 Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/544 (87%), Positives = 509/544 (94%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE AG AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHERAGDARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVSYSR+AVPQPLLVDIVDTMARYGRLQLVK+P HGL LVSLDRAVL EV+R+KKI+P Sbjct 68 DALVSYSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLILVSLDRAVLTEVMRHKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISL-HQEG-WQLRDY 178 MLG ++DDDTV+VHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAHPI L +EG W+LRDY Sbjct 128 MLGEKVDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHPIDLAFEEGHWELRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q++AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ART Sbjct 188 QQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWKRELIART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+CVE Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVTMTD+ERM YA AEPEERY++CST HTKIAVVKSILAKHPD TLVIGAYLDQLDEL Sbjct 368 VRVTMTDAERMSYAVAEPEERYKLCSTAHTKIAVVKSILAKHPDSPTLVIGAYLDQLDEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 G L APVI+GST+ ERE LFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GEALNAPVIKGSTKNKEREILFDQFRNGEIQTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVV+RD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRITDADDLL 547 Query 539 GPAI 542 GPAI Sbjct 548 GPAI 551 >gi|226308134|ref|YP_002768094.1| ATP-dependent DNA helicase [Rhodococcus erythropolis PR4] gi|226187251|dbj|BAH35355.1| putative ATP-dependent DNA helicase [Rhodococcus erythropolis PR4] Length=552 Score = 957 bits (2473), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/544 (87%), Positives = 509/544 (94%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE AG AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHERAGDARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALVS+SR+AVPQPLLVDIVDTMARYGRLQLVK+P HGL LVSLDRAVL EV+R+KKI+P Sbjct 68 DALVSFSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLILVSLDRAVLTEVMRHKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISL-HQEG-WQLRDY 178 MLG ++DDDTV+VHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAHPI L +EG W+LRDY Sbjct 128 MLGEKVDDDTVIVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHPIDLAFEEGHWELRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q++AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ART Sbjct 188 QQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWKRELIART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+CVE Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVTMTD+ERM YA AEPEERY++CST HTKIAVVKSILAKHPD TLVIGAYLDQLDEL Sbjct 368 VRVTMTDAERMSYAVAEPEERYKLCSTAHTKIAVVKSILAKHPDSPTLVIGAYLDQLDEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 G L APVI+GST+ ERE LFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GEALNAPVIKGSTKNKEREILFDQFRNGEIQTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVV+RD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRITDADDLL 547 Query 539 GPAI 542 GPAI Sbjct 548 GPAI 551 >gi|226364428|ref|YP_002782210.1| ATP-dependent DNA helicase [Rhodococcus opacus B4] gi|226242917|dbj|BAH53265.1| putative ATP-dependent DNA helicase [Rhodococcus opacus B4] Length=559 Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust. Identities = 473/551 (86%), Positives = 505/551 (92%), Gaps = 9/551 (1%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHERANDARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVL EV R+KKIAP Sbjct 68 DALVNFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLTEVTRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEG-------- 172 MLGAR+DDDTVVVHPSERGR+KQLLLK+GWPAEDLAGYVDGEAHPI L +G Sbjct 128 MLGARVDDDTVVVHPSERGRLKQLLLKVGWPAEDLAGYVDGEAHPIDLDFDGTSPGSADG 187 Query 173 -WQLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWK 231 W LRDYQ +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWK Sbjct 188 HWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK 247 Query 232 RELVARTSLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYD 291 REL+ARTSLTE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYD Sbjct 248 RELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD 307 Query 292 EVHLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWI 351 EVHLLPAPVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWI Sbjct 308 EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI 367 Query 352 APAECVEVRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAY 411 APA+CVEVRVT+TD+ERM YA AEP+ERY++CST HTKIAVVKSIL +H D TL+IGAY Sbjct 368 APADCVEVRVTLTDAERMAYAVAEPDERYKLCSTAHTKIAVVKSILERHTDAPTLIIGAY 427 Query 412 LDQLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQ 471 LDQLDELG L APVI+GST+ ERE LFD FR GE+ TLVVSKVANFSIDLPEA+VAVQ Sbjct 428 LDQLDELGEALNAPVIKGSTKNKEREELFDRFRAGEIQTLVVSKVANFSIDLPEASVAVQ 487 Query 472 VSGTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYII 531 VSGTFGSRQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I Sbjct 488 VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI 547 Query 532 RDADDLLGPAI 542 DADDLLGPAI Sbjct 548 TDADDLLGPAI 558 >gi|312138404|ref|YP_004005740.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] gi|311887743|emb|CBH47055.1| ATP-dependent DNA helicase [Rhodococcus equi 103S] Length=552 Score = 947 bits (2449), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/544 (87%), Positives = 508/544 (94%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHERADEARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SR+AVPQPLLVDIVDTMARYGRLQLVK+P HGLTLVSLDRAVL EV+R+KKIAP Sbjct 68 DALVNFSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLTEVMRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISL-HQEG-WQLRDY 178 MLGA+IDDDTV+VHPSERG +KQ+LLKIGWPAEDLAGYVDGEAHPI L +EG WQLRDY Sbjct 128 MLGAKIDDDTVIVHPSERGHLKQMLLKIGWPAEDLAGYVDGEAHPIDLAFEEGHWQLRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ART Sbjct 188 QEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWKRELIART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE EIGE+SGE+KEIRPVTI+TYQ+ITR++KGEY+HLELFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEEEIGEYSGEKKEIRPVTIATYQVITRKSKGEYKHLELFDSRDWGLVIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+CVE Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVT+TD+ERM YATAEPEERY++CST TK AVVKSIL +HP TLVIGAYLDQL+EL Sbjct 368 VRVTLTDAERMAYATAEPEERYKLCSTARTKHAVVKSILDRHPGAPTLVIGAYLDQLEEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 GAEL APVIQGSTR EREALFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GAELDAPVIQGSTRNKEREALFDRFRAGEIQTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRITDADDLL 547 Query 539 GPAI 542 GPAI Sbjct 548 GPAI 551 >gi|111021918|ref|YP_704890.1| DNA repair helicase [Rhodococcus jostii RHA1] gi|110821448|gb|ABG96732.1| probable DNA repair helicase [Rhodococcus jostii RHA1] Length=584 Score = 947 bits (2448), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/551 (86%), Positives = 504/551 (92%), Gaps = 9/551 (1%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 33 VQSDKTLLLEVDHERANDARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 92 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVL EV R+KKIAP Sbjct 93 DALVNFSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLTEVTRHKKIAP 152 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEG-------- 172 MLGAR+DDDTVVVHPSERGR+KQLLLK+GWPAEDLAGYVDGEAH I L +G Sbjct 153 MLGARVDDDTVVVHPSERGRLKQLLLKVGWPAEDLAGYVDGEAHAIDLDFDGTSPGSADG 212 Query 173 -WQLRDYQRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWK 231 W LRDYQ +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWK Sbjct 213 TWHLRDYQEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWK 272 Query 232 RELVARTSLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYD 291 REL+ARTSLTE EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYD Sbjct 273 RELIARTSLTEEEIGEYSGERKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYD 332 Query 292 EVHLLPAPVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWI 351 EVHLLPAPVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWI Sbjct 333 EVHLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWI 392 Query 352 APAECVEVRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAY 411 APA+CVEVRVT+TD+ERM YA AEP+ERY++CST HTKIAVVKSIL +H D TL+IGAY Sbjct 393 APADCVEVRVTLTDAERMSYAVAEPDERYKLCSTAHTKIAVVKSILERHTDAPTLIIGAY 452 Query 412 LDQLDELGAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQ 471 LDQLDELG L APVI+GST+ ERE LFD FR GE+ TLVVSKVANFSIDLPEA+VAVQ Sbjct 453 LDQLDELGEALNAPVIKGSTKNKEREELFDRFRAGEIQTLVVSKVANFSIDLPEASVAVQ 512 Query 472 VSGTFGSRQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYII 531 VSGTFGSRQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I Sbjct 513 VSGTFGSRQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRI 572 Query 532 RDADDLLGPAI 542 DADDLLGPAI Sbjct 573 TDADDLLGPAI 583 >gi|325674600|ref|ZP_08154287.1| DNA repair helicase [Rhodococcus equi ATCC 33707] gi|325554186|gb|EGD23861.1| DNA repair helicase [Rhodococcus equi ATCC 33707] Length=552 Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/544 (87%), Positives = 508/544 (94%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDHE A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHERADEARQAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SR+AVPQPLLVDIVDTMARYGRLQLVK+P HGLTLVSLDRAVL EV+R+KKIAP Sbjct 68 DALVNFSRFAVPQPLLVDIVDTMARYGRLQLVKSPVHGLTLVSLDRAVLTEVMRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISL-HQEG-WQLRDY 178 MLGA+IDDDTV+VHPSERG +KQ+LLKIGWPAEDLAGYVDGEAHPI L +EG WQLRDY Sbjct 128 MLGAKIDDDTVIVHPSERGHLKQMLLKIGWPAEDLAGYVDGEAHPIDLAFEEGHWQLRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ART Sbjct 188 QEMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWKRELIART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE EIGE+SGE+KEIRPVTI+TYQ+ITR++KGEY+HLELFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEEEIGEYSGEKKEIRPVTIATYQVITRKSKGEYKHLELFDSRDWGLVIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+CVE Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVT+TD+ERM YATAEPEERY++CST TK AVVKS+L +HP TLVIGAYLDQL+EL Sbjct 368 VRVTLTDAERMAYATAEPEERYKLCSTARTKHAVVKSVLDRHPGAPTLVIGAYLDQLEEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 GAEL APVIQGSTR EREALFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GAELDAPVIQGSTRNKEREALFDRFRAGEIQTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRITDADDLL 547 Query 539 GPAI 542 GPAI Sbjct 548 GPAI 551 >gi|333918492|ref|YP_004492073.1| DNA repair helicase [Amycolicicoccus subflavus DQS3-9A1] gi|333480713|gb|AEF39273.1| DNA repair helicase [Amycolicicoccus subflavus DQS3-9A1] Length=555 Score = 938 bits (2424), Expect = 0.0, Method: Compositional matrix adjust. Identities = 460/543 (85%), Positives = 508/543 (94%), Gaps = 1/543 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLE++H L+ AR+AIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEIEHPLSEQARSAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV +SRY VPQPLLVDIVDT+ARYGRLQLVK+PAHGLTLVSLDRAVL EVLR+KKIAP Sbjct 68 DALVRFSRYPVPQPLLVDIVDTIARYGRLQLVKHPAHGLTLVSLDRAVLTEVLRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEG-WQLRDYQ 179 MLGA++DDDTV+VHPSERGR+KQ+LLKIGWPA+DLAGYVDGEAH I+L G W+LRDYQ Sbjct 128 MLGAKVDDDTVIVHPSERGRLKQMLLKIGWPADDLAGYVDGEAHAIALETHGEWELRDYQ 187 Query 180 RLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTS 239 R+AA+SFW GGSGVVVLPCG+GKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ARTS Sbjct 188 RMAANSFWDGGSGVVVLPCGSGKTIVGAAAMAKAQATTLILVTNTVAGRQWKRELLARTS 247 Query 240 LTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAP 299 L E EIGE+SGE+KEIRPVTI+TYQ+ITRRTKGEY+HLELFDSRDWGL+IYDEVHLLPAP Sbjct 248 LKEEEIGEYSGEKKEIRPVTIATYQVITRRTKGEYKHLELFDSRDWGLVIYDEVHLLPAP 307 Query 300 VFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEV 359 VFRMTADLQS+RRLGLTATL+REDGREGDVF+LIGPKRYDAPWKDIEAQGWIAPA+C+EV Sbjct 308 VFRMTADLQSRRRLGLTATLVREDGREGDVFALIGPKRYDAPWKDIEAQGWIAPADCIEV 367 Query 360 RVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELG 419 RVT+T++ERM YA AEPEERYR+CST HTK+AVVK+IL KHPD TLVIGAY+DQL+ELG Sbjct 368 RVTLTEAERMAYAVAEPEERYRLCSTAHTKVAVVKAILDKHPDAPTLVIGAYIDQLEELG 427 Query 420 AELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSR 479 AEL APVIQGSTR EREAL+DAFRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSR Sbjct 428 AELDAPVIQGSTRNKEREALYDAFRRGEIQTLVVSKVANFSIDLPEASVAVQVSGTFGSR 487 Query 480 QEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLG 539 QEEAQRLGR+LRPK DG A FYSVV+RD+LD EYAAHRQRFLAEQGY Y I DADDLLG Sbjct 488 QEEAQRLGRLLRPKKDGHQAHFYSVVSRDTLDTEYAAHRQRFLAEQGYAYRIVDADDLLG 547 Query 540 PAI 542 PAI Sbjct 548 PAI 550 >gi|343928179|ref|ZP_08767634.1| putative ATP-dependent DNA helicase [Gordonia alkanivorans NBRC 16433] gi|343761877|dbj|GAA14560.1| putative ATP-dependent DNA helicase [Gordonia alkanivorans NBRC 16433] Length=559 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 454/542 (84%), Positives = 503/542 (93%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A AAR AIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 11 VQSDKTLLLEVDHPDAQAARQAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 70 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRYAVPQPLL+D+VDTM R+GRLQLVK+PAHGLTLVSLDRAVL EV+R+KK+AP Sbjct 71 DALVTFSRYAVPQPLLMDVVDTMGRFGRLQLVKHPAHGLTLVSLDRAVLLEVMRHKKVAP 130 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGA+IDDDTV+VHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAH I L Q+ W LRDYQ Sbjct 131 MLGAQIDDDTVIVHPSERGRLKQVLLKVGWPAEDLAGYVDGEAHHIELDQDDWHLRDYQE 190 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKAGATTLILVTN VA RQWKREL+ART+L Sbjct 191 MAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWKRELIARTTL 250 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ++TR++KGEYR+L+LFDSRDWGLIIYDEVHLLPAPV Sbjct 251 TEEEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIYDEVHLLPAPV 310 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 311 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 370 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD ER+ YA AEPEE+Y++CST HTK+ VVK+IL KH +QTLVIGAY+DQL+ELG Sbjct 371 VTLTDEERLQYAVAEPEEKYKLCSTAHTKVNVVKAILNKHKGQQTLVIGAYIDQLEELGR 430 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL PVIQGST+ ERE LFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 431 ELDCPVIQGSTKNKEREILFDRFRSGELQTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 490 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DGG A FYSVV+RD+LDA+YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 491 EEAQRLGRLLRPKHDGGQAHFYSVVSRDTLDADYAAHRQRFLAEQGYAYRITDADDLLGP 550 Query 541 AI 542 I Sbjct 551 TI 552 >gi|262201196|ref|YP_003272404.1| helicase [Gordonia bronchialis DSM 43247] gi|262084543|gb|ACY20511.1| helicase domain protein [Gordonia bronchialis DSM 43247] Length=555 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 466/542 (86%), Positives = 510/542 (95%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A AARAAIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHPDAPAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV+YSRYAVPQPLL+D+VDTM R+GRLQLVK+PA GLTLVSLDRAVLEEV+RNKKIAP Sbjct 68 DALVTYSRYAVPQPLLMDVVDTMGRFGRLQLVKHPAQGLTLVSLDRAVLEEVMRNKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAHPI L Q W LRDYQ Sbjct 128 MLGARIDDDTVVVHPSERGRLKQVLLKVGWPAEDLAGYVDGEAHPIGLDQGDWHLRDYQE 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKAGATTLILVTN VA RQWKREL+ART+L Sbjct 188 MAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWKRELIARTTL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ++TR++KGEYR+L+LFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVMTRKSKGEYRNLDLFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ER+ YA AEPEE+Y++CST HTK+ VVKSILA+H D QTLVIGAY+DQL+ELG Sbjct 368 VTLTDNERLQYAVAEPEEKYKLCSTAHTKVNVVKSILARHSDSQTLVIGAYIDQLEELGR 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQGST+ EREALFD FR GE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELDAPVIQGSTKNKEREALFDRFRSGELQTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGG A FYSVV+RD+LDA+YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKSDGGQAHFYSVVSRDTLDADYAAHRQRFLAEQGYAYRITDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|326384180|ref|ZP_08205862.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197045|gb|EGD54237.1| helicase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=550 Score = 921 bits (2380), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/542 (86%), Positives = 508/542 (94%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A AARAAIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHPGAAAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SR+ VPQPLLVDIVDTM R+GRLQL KNPAHGLTLVSLDRAVLEE+LRNKK+AP Sbjct 68 DALVTHSRFPVPQPLLVDIVDTMGRFGRLQLTKNPAHGLTLVSLDRAVLEEILRNKKVAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAHPI L Q W LRDYQ Sbjct 128 MLGARIDDDTVVVHPSERGRLKQILLKVGWPAEDLAGYVDGEAHPIDLDQSDWHLRDYQE 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAADSFWAGGSGVVVLPCGAGKT+VGAAAMAKAGATTLILVTN VA RQWKRELVARTSL Sbjct 188 LAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAGATTLILVTNTVAGRQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTI+TYQ++TR++KGEY++L+LFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTIATYQVMTRKSKGEYKNLDLFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAEC+EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VTMTD ER+ YA AEPEE+Y++CST H+K+ VV+SIL +H D QTLVIGAY+DQL+ELG Sbjct 368 VTMTDEERLQYAVAEPEEKYKLCSTAHSKVRVVRSILDRHKDSQTLVIGAYIDQLEELGR 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL PVIQGSTR +ERE LFDAFRRGE+ TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ELDCPVIQGSTRNAEREKLFDAFRRGELQTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DGG A FYSVV+RDSLDA+YAAHRQRFLAEQGY Y I D+DD++GP Sbjct 488 EEAQRLGRLLRPKSDGGQAHFYSVVSRDSLDADYAAHRQRFLAEQGYAYRIVDSDDIVGP 547 Query 541 AI 542 + Sbjct 548 PL 549 >gi|331699464|ref|YP_004335703.1| type III restriction protein res subunit [Pseudonocardia dioxanivorans CB1190] gi|326954153|gb|AEA27850.1| type III restriction protein res subunit [Pseudonocardia dioxanivorans CB1190] Length=553 Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/542 (84%), Positives = 493/542 (91%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH AG AR+AIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHPAAGDARSAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV YSRYAVPQPLLVD+VDTM RYGRLQL ++P HGL + +LDRAVLEEVLR KKIAP Sbjct 68 DALVRYSRYAVPQPLLVDVVDTMGRYGRLQLSQSPVHGLVMTALDRAVLEEVLRQKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERG +KQ LLKIGWPAEDLAGYVDGEAH I+L Q+GW LR YQ+ Sbjct 128 MLGARIDDDTVVVHPSERGPLKQALLKIGWPAEDLAGYVDGEAHEIALAQDGWHLRSYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A D FW GGSGVVVLPCGAGKTLVGAAAMA+A ATTLILVTN V+ RQWKREL+ARTSL Sbjct 188 EAVDGFWQGGSGVVVLPCGAGKTLVGAAAMAQAKATTLILVTNTVSGRQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTI+TYQ+ITRRTKGEYRHLELFDSRDWGL+IYDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLVIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPW+DIEAQGWIAPAEC+EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWRDIEAQGWIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ER+ YATA+ EERYR+ ST TK+ VVK+IL +HPDE TLVIGAYLDQLD+LG Sbjct 368 VTLTDAERLGYATADAEERYRMASTARTKLPVVKAILDRHPDEPTLVIGAYLDQLDDLGG 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 L PVIQGST+ EREALFDAFR GEV LVVSKVANFSIDLPEA VA+QVSGTFGSRQ Sbjct 428 ALNCPVIQGSTKNKEREALFDAFRAGEVKRLVVSKVANFSIDLPEATVAIQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DG A FYSVV+RD+LD +YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKGDGRQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYRIVDADDLLGP 547 Query 541 AI 542 A+ Sbjct 548 AL 549 >gi|319948963|ref|ZP_08023067.1| ATP-dependent DNA helicase [Dietzia cinnamea P4] gi|319437368|gb|EFV92384.1| ATP-dependent DNA helicase [Dietzia cinnamea P4] Length=555 Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust. Identities = 452/544 (84%), Positives = 497/544 (92%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLE+DHE A AR A+APFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEIDHEQAADARQALAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 D LVSYSR+ VPQPLLVDI +TMARYGRLQLVK+P HGLTLVSLD AVL EV R+KKIAP Sbjct 68 DVLVSYSRFPVPQPLLVDIAETMARYGRLQLVKSPVHGLTLVSLDSAVLAEVKRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISL--HQEGWQLRDY 178 MLGA ID DTV+VHPSERGR+KQ LLK+GWPAEDLAGYVDGEAH I+L +E W+LRDY Sbjct 128 MLGADIDADTVIVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHEIALSTEEEQWELRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q++AADSFWAGGSGVVVLPCGAGKT+VGAAAMAKA ATTLILVTN VA RQWKREL+ART Sbjct 188 QQMAADSFWAGGSGVVVLPCGAGKTMVGAAAMAKAKATTLILVTNTVAGRQWKRELLART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 +LTE+EIGE+SGERKEIRPVTI+TYQ++TR+TKG +R LELFDSRDWGL+IYDEVHLLPA Sbjct 248 TLTEDEIGEYSGERKEIRPVTIATYQVVTRKTKGVHRALELFDSRDWGLMIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+C+E Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCIE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVT+T++ERM+YATAE E++Y++CST TKI VV+ ILA+H TLVIGAYLDQL+EL Sbjct 368 VRVTLTENERMLYATAEAEDKYKLCSTARTKIPVVRKILARHAGAPTLVIGAYLDQLEEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 GAEL APVIQGST ERE LFD FR GE++TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GAELDAPVIQGSTSNKEREKLFDQFRNGEISTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVVARD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGQAHFYSVVARDTLDAEYAAHRQRFLAEQGYAYRIVDADDLL 547 Query 539 GPAI 542 GP I Sbjct 548 GPPI 551 >gi|257057395|ref|YP_003135227.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM 43017] gi|256587267|gb|ACU98400.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM 43017] Length=548 Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust. Identities = 448/540 (83%), Positives = 491/540 (91%), Gaps = 0/540 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDHELA AR AIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHELAEDARIAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DAL YSR+ VPQPLL+DIVDTM R+GRLQ+ +PAHGL + + DRAVLEEVLRNKKI+P Sbjct 68 DALTRYSRFPVPQPLLIDIVDTMGRFGRLQIHNHPAHGLVMTTTDRAVLEEVLRNKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLG RID DTVVV+PSERGR+KQ LLK+GWPAEDLAGYVDGE+HPI+L + GW LRDYQR Sbjct 128 MLGTRIDPDTVVVYPSERGRLKQALLKVGWPAEDLAGYVDGESHPIALEENGWALRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 AAD+FWAGGSGVVVLPCGAGKTLVGAAAMA+A ATTLILVTN VA RQWKRELV RTSL Sbjct 188 QAADAFWAGGSGVVVLPCGAGKTLVGAAAMAQAQATTLILVTNTVAGRQWKRELVERTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGE+KEIRPVTI+TYQ+ITRR+KGEY+HLELFDSRDWGLIIYDEVHLLPAPV Sbjct 248 TEDEIGEYSGEKKEIRPVTIATYQVITRRSKGEYKHLELFDSRDWGLIIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYD PW+DIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ER+ YATA+ EERYR+ ST TK V+ SI+ KH E TLVIGAYLDQL+ELGA Sbjct 368 VTLTDAERLAYATADSEERYRLASTARTKNKVISSIVDKHAGEPTLVIGAYLDQLEELGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APV+QGSTR EREALFDAFRRGE+ LVVSKVANFSIDLPEA+VA+QVSGTFGSRQ Sbjct 428 ELDAPVVQGSTRNKEREALFDAFRRGEIDKLVVSKVANFSIDLPEASVAIQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK+DG A FYSVVARD++D EYAAHRQRFLAEQGY Y I DADDLL P Sbjct 488 EEAQRLGRLLRPKSDGRQAHFYSVVARDTVDTEYAAHRQRFLAEQGYAYHIVDADDLLRP 547 >gi|296138541|ref|YP_003645784.1| type III restriction protein res subunit [Tsukamurella paurometabola DSM 20162] gi|296026675|gb|ADG77445.1| type III restriction protein res subunit [Tsukamurella paurometabola DSM 20162] Length=556 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/544 (85%), Positives = 509/544 (94%), Gaps = 2/544 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH+ A AARAAIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHDQADAARAAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV++SRY VPQPLLVD+VDTM+RYGRLQLVK+P HGLTLVSLDRAVLEEVLR+KKIAP Sbjct 68 DALVTFSRYPVPQPLLVDVVDTMSRYGRLQLVKSPVHGLTLVSLDRAVLEEVLRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEG--WQLRDY 178 M+GARIDDDTVVVHPSERG +KQLLLK+GWPAEDLAGYVDGE+HPI+L E W+LRDY Sbjct 128 MVGARIDDDTVVVHPSERGHLKQLLLKVGWPAEDLAGYVDGESHPIALDTETDPWELRDY 187 Query 179 QRLAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVART 238 Q+ AADSFW GGSGVVVLPCGAGKT+VGAAAMA+A ATTLILVTN VA RQWKREL+ART Sbjct 188 QKTAADSFWLGGSGVVVLPCGAGKTMVGAAAMARAQATTLILVTNTVAGRQWKRELLART 247 Query 239 SLTENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPA 298 SLTE EIGE+SGE+KEIRPVTI+TYQ++TR++KGEY++L+LFDSRDWGL+IYDEVHLLPA Sbjct 248 SLTEEEIGEYSGEKKEIRPVTIATYQVLTRKSKGEYKNLDLFDSRDWGLMIYDEVHLLPA 307 Query 299 PVFRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVE 358 PVFRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPA+CVE Sbjct 308 PVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPADCVE 367 Query 359 VRVTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDEL 418 VRVT+T+++RM YATAEP+ERY++ ST K AVVK+IL +H QTLVIGAY+DQL+EL Sbjct 368 VRVTLTENQRMQYATAEPDERYKLASTAPAKSAVVKAILERHRGAQTLVIGAYIDQLEEL 427 Query 419 GAELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGS 478 GA L APVIQGST+T EREALFDAFRRGE++TLVVSKVANFSIDLPEA+VAVQVSGTFGS Sbjct 428 GAALDAPVIQGSTKTKEREALFDAFRRGEISTLVVSKVANFSIDLPEASVAVQVSGTFGS 487 Query 479 RQEEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLL 538 RQEEAQRLGR+LRPK DGG A FYSVV+RD+LDAEYAAHRQRFLAEQGY Y I DADDLL Sbjct 488 RQEEAQRLGRLLRPKHDGGTAHFYSVVSRDTLDAEYAAHRQRFLAEQGYAYRIVDADDLL 547 Query 539 GPAI 542 GPA+ Sbjct 548 GPAV 551 >gi|324998370|ref|ZP_08119482.1| DNA/RNA helicase, superfamily II [Pseudonocardia sp. P1] Length=553 Score = 907 bits (2344), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/542 (83%), Positives = 492/542 (91%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A ARA+IAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHSDAEQARASIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV +SRY VPQPLLVD+VDTM RYGRLQL +PAHGL L + DRAVLEE+LR KKI+P Sbjct 68 DALVRWSRYPVPQPLLVDVVDTMGRYGRLQLSNHPAHGLVLTAFDRAVLEEILRQKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGR+KQ LLK+GWPAEDLAGYVDGEAHPI L Q+GW LRDYQ+ Sbjct 128 MLGARIDDDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIELEQDGWSLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A D FW GGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTN V+ RQWKREL+ARTSL Sbjct 188 QAVDGFWDGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNTVSGRQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ++TRRTKGEY+HLELFDSRDWGL++YDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVVTRRTKGEYKHLELFDSRDWGLVVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKR+DAPW+DIEAQGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRFDAPWRDIEAQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ERM YATA+ EERYR ST HTK+ VV+++L +H EQTLVIGAYL+QL+ LG Sbjct 368 VTLTDAERMAYATADAEERYRTASTAHTKLNVVQAVLDRHKGEQTLVIGAYLEQLEALGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 +L APVIQGSTR ERE LFD FRRGE+ LVVSKVANFSIDLPEA +AVQVSGTFGSRQ Sbjct 428 KLDAPVIQGSTRNKERERLFDLFRRGELDRLVVSKVANFSIDLPEATIAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADG A FYSVV+RD++D +YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGRQAHFYSVVSRDTVDTDYAAHRQRFLAEQGYAYRIVDADDLLGP 547 Query 541 AI 542 A+ Sbjct 548 AL 549 >gi|134097156|ref|YP_001102817.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] gi|291005387|ref|ZP_06563360.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] gi|133909779|emb|CAL99891.1| ATP-dependent DNA helicase [Saccharopolyspora erythraea NRRL 2338] Length=553 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 447/542 (83%), Positives = 492/542 (91%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEV+H A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVEHAQADEARIAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 D LV +SRY VPQPLLVDIV+TM R+GRLQL +PAHGL LVSLDRAVLEEVLRNKKI P Sbjct 68 DGLVRHSRYPVPQPLLVDIVETMGRFGRLQLTNDPAHGLVLVSLDRAVLEEVLRNKKIQP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 M GARIDDDTVVVHPSERGR+KQ+LLK+GWPAEDLAGYVDGEAHPISL ++GW LRDYQR Sbjct 128 MFGARIDDDTVVVHPSERGRLKQMLLKVGWPAEDLAGYVDGEAHPISLAEDGWALRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A +FWAGGSGVVVLPCGAGKTLVGAAAMA+AGATTLILVTN VA RQWKRELV RTSL Sbjct 188 QAVQAFWAGGSGVVVLPCGAGKTLVGAAAMAEAGATTLILVTNTVAGRQWKRELVERTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGE+KEIRPVTI+TYQ+ITR++KGEY+HLELFDSRDWGL++YDEVHLLPAPV Sbjct 248 TEEEIGEYSGEKKEIRPVTIATYQVITRKSKGEYKHLELFDSRDWGLVVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIE+QGWIAPAECVEVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIESQGWIAPAECVEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD ER+ YAT+E E+RY++CST TK VVK+IL +HP E LVIGAYL+QL ELG Sbjct 368 VTLTDDERLRYATSEAEDRYKVCSTARTKAPVVKAILDRHPGEPALVIGAYLEQLHELGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 L AP+++GST+ EREALFDAFRRGE+ LVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ALDAPIVEGSTKNKEREALFDAFRRGEINRLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKA+ A FYSVV+RD+LD +YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKAERKQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYRIVDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 >gi|256374606|ref|YP_003098266.1| type III restriction protein res subunit [Actinosynnema mirum DSM 43827] gi|255918909|gb|ACU34420.1| type III restriction protein res subunit [Actinosynnema mirum DSM 43827] Length=550 Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/542 (84%), Positives = 498/542 (92%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A ARAAIAPFAELERAPEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHPAADEARAAIAPFAELERAPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV +SRY VPQPLLVD+VD M RYGRLQL +PAHGL L SLDRAVLEEVLR+KKI P Sbjct 68 DALVRFSRYPVPQPLLVDVVDVMGRYGRLQLSTHPAHGLVLQSLDRAVLEEVLRHKKIKP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 M GARIDDDTVVVH SERGR+KQLLLK+GWPAEDLAGYVDGEAHPI L +EGWQLRDYQR Sbjct 128 MFGARIDDDTVVVHASERGRLKQLLLKVGWPAEDLAGYVDGEAHPIELVEEGWQLRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 LAA +F AGGSGVVVLPCGAGKT+VGAAAMA+AGATTLILVTN VA RQWKRELVARTSL Sbjct 188 LAAQAFRAGGSGVVVLPCGAGKTMVGAAAMAEAGATTLILVTNTVAGRQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTI+TYQ+ITR++KGEY+HLELFDSRDWGLI+YDEVHLLPAPV Sbjct 248 TEDEIGEYSGERKEIRPVTIATYQVITRKSKGEYKHLELFDSRDWGLIVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDG+EG+VFSLIGPKR+D PW+DIEAQGWIAPAEC EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGQEGEVFSLIGPKRFDVPWRDIEAQGWIAPAECTEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ER+ YATAEPEERY++CST TK+ VVK++L KHP E LVIGAYLDQL+ELG Sbjct 368 VTLTDAERLGYATAEPEERYKLCSTARTKLPVVKAVLDKHPGEPALVIGAYLDQLEELGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 LGAPV+QG+T+ ERE LFDAFRRGE++TLVVSKVANFSIDLPEA+VAVQVSGTFGSRQ Sbjct 428 ALGAPVVQGATKNKEREELFDAFRRGELSTLVVSKVANFSIDLPEASVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADG A FYSVV+RD+LD +YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKADGRQAHFYSVVSRDTLDTDYAAHRQRFLAEQGYAYRIVDADDLLGP 547 Query 541 AI 542 I Sbjct 548 KI 549 >gi|300790353|ref|YP_003770644.1| DNA excision repair protein [Amycolatopsis mediterranei U32] gi|299799867|gb|ADJ50242.1| DNA excision repair protein [Amycolatopsis mediterranei U32] gi|340532036|gb|AEK47241.1| DNA excision repair protein [Amycolatopsis mediterranei S699] Length=548 Score = 899 bits (2324), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/540 (81%), Positives = 489/540 (91%), Gaps = 0/540 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVDH AG AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDHPQAGDARVAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DAL +YSR+ VPQPLL+D+VD M R+GRLQ+ +PAHGL + + DRAVL EV+RNKKI+P Sbjct 68 DALTTYSRFPVPQPLLIDVVDVMGRFGRLQIANHPAHGLVMSTTDRAVLTEVVRNKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 M+GARID+DTV+VHPSERGR+KQ LLK+GWPAEDLAGYVDGEAHPI+L ++ W LRDYQR Sbjct 128 MIGARIDEDTVIVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIALDEQDWHLRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 +AA++FWAGGSGVVVLPCGAGKTLVGAAAMA+A ATTLILVTN VA RQWKREL+ARTSL Sbjct 188 MAAEAFWAGGSGVVVLPCGAGKTLVGAAAMARAQATTLILVTNTVAGRQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGE+KEIRPVTI+TYQ+ITR+TKGEYRHLELFDSRDWGL++YDEVHLLPAPV Sbjct 248 TEEEIGEYSGEKKEIRPVTIATYQVITRKTKGEYRHLELFDSRDWGLVVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYD PW+DIEAQGWIAPAEC EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAPAECTEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD+ER+ YATAE +ERY++ +T TK V+KSI+AKH E TLVIGAYLDQL+ LG Sbjct 368 VTLTDAERLEYATAEADERYKLAATALTKTPVIKSIVAKHAGEPTLVIGAYLDQLEMLGD 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQG+TR ERE LFD FRRGE+ TLVVSKVANFSIDLPEA+VA+Q+SGTFGSRQ Sbjct 428 ELDAPVIQGATRNKEREELFDKFRRGEIKTLVVSKVANFSIDLPEASVAIQISGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DG A FYS+V+RD++D EYAAHRQRFLAEQGY Y I DADDLL P Sbjct 488 EEAQRLGRLLRPKGDGRQAHFYSIVSRDTVDTEYAAHRQRFLAEQGYAYHIVDADDLLRP 547 >gi|302530595|ref|ZP_07282937.1| DNA helicase [Streptomyces sp. AA4] gi|302439490|gb|EFL11306.1| DNA helicase [Streptomyces sp. AA4] Length=548 Score = 891 bits (2302), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/540 (81%), Positives = 487/540 (91%), Gaps = 0/540 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKTVLLEVD+ A AR AIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTVLLEVDNPRADDARIAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DAL +YSR+ VPQPLL+D+VD M R+GRLQ+ +PAHGL + + DRAVLEEV RNKKI+P Sbjct 68 DALTTYSRFPVPQPLLIDVVDVMGRFGRLQIANHPAHGLVMTTTDRAVLEEVSRNKKISP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTV+VHPSERGR+KQ LLK+GWPAEDLAGYVDGEAHPI L ++ W LRDYQR Sbjct 128 MLGARIDDDTVIVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIDLAEDDWHLRDYQR 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 AA++FWAGGSGVVVLPCGAGKTLVGAAAMA A ATTLILVTN VA RQWKRELVARTSL Sbjct 188 KAAEAFWAGGSGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTVAGRQWKRELVARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGE+KEIRPVTI+TYQ++TR+TKGEYRHLELFDSRDWGL++YDEVHLLPAPV Sbjct 248 TEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRHLELFDSRDWGLVVYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYD PW+DIEAQGWIAPAEC EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAPAECTEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+T++ER+ YATA+ +ERY++ +T TKI V++SI+ KHP E TLVIGAYLDQL+ LGA Sbjct 368 VTLTENERLQYATADSDERYKLAATAMTKIPVIRSIVDKHPGEPTLVIGAYLDQLEMLGA 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL APVIQG+T+ ERE LFD FRRGE+ TLVVSKVANFSIDLPEA+VA+QVSGTFGSRQ Sbjct 428 ELEAPVIQGATKNKEREELFDKFRRGELRTLVVSKVANFSIDLPEASVAIQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DG A FYS+V+RD++D EYAAHRQRFLAEQGY Y I DA+DL P Sbjct 488 EEAQRLGRLLRPKGDGRQAHFYSIVSRDTVDTEYAAHRQRFLAEQGYAYHIVDAEDLRRP 547 >gi|284989384|ref|YP_003407938.1| type III restriction protein res subunit [Geodermatophilus obscurus DSM 43160] gi|284062629|gb|ADB73567.1| type III restriction protein res subunit [Geodermatophilus obscurus DSM 43160] Length=561 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/540 (81%), Positives = 480/540 (89%), Gaps = 0/540 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH A RAAIAPFAELER+PEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVDHPAARDCRAAIAPFAELERSPEHVHTYRVTPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV +SRY VP LLVDI DTM R+GRL L NP HGL L + DRAVLEEV+R+K++AP Sbjct 68 DALVRHSRYPVPHALLVDIADTMDRFGRLTLANNPVHGLVLTTSDRAVLEEVVRSKRVAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARID+DTVVVHPSERGR+KQ LLKIGWPAEDLAGYVDG+AHPI L Q+GW LRDYQ+ Sbjct 128 MLGARIDEDTVVVHPSERGRLKQALLKIGWPAEDLAGYVDGQAHPIELAQDGWHLRDYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A + FWAGGSGVVVLPCGAGKTLVGAAAMA+A ATTLILVTN VA RQWKREL+ARTSL Sbjct 188 EAVEGFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAGRQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ+IT R KGEYRHL+LFD++DWGLI+YDEVHLLPAP+ Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVITTRRKGEYRHLDLFDAQDWGLIVYDEVHLLPAPI 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FR+TADLQS+RRLGLTATL+REDGRE DVFSLIGPKRYDAPW+DIEAQG+IAPAEC+EVR Sbjct 308 FRLTADLQSRRRLGLTATLVREDGREDDVFSLIGPKRYDAPWRDIEAQGYIAPAECIEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 V++ D ERM YA AEPEERYRI +T +K+ V++ +L +HPDEQ LVIGAYLDQLDELG Sbjct 368 VSLDDEERMTYAVAEPEERYRIAATATSKLPVIRRVLDRHPDEQKLVIGAYLDQLDELGR 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 L APVIQGST ERE LFDAFR GEV TLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ Sbjct 428 ALDAPVIQGSTTNREREKLFDAFRAGEVKTLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPKADG A FY+VV+RD+LDAEYAAHRQRFLAEQGY Y I DA DL GP Sbjct 488 EEAQRLGRVLRPKADGRQAHFYTVVSRDTLDAEYAAHRQRFLAEQGYAYTIVDAADLAGP 547 >gi|288920789|ref|ZP_06415088.1| helicase domain protein [Frankia sp. EUN1f] gi|288347808|gb|EFC82086.1| helicase domain protein [Frankia sp. EUN1f] Length=1446 Score = 882 bits (2278), Expect = 0.0, Method: Compositional matrix adjust. Identities = 426/537 (80%), Positives = 475/537 (89%), Gaps = 0/537 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEVDH LAG ARA+IAPFAELER+PEHVHTYR+TPLALWNARAAGHDAEQVV Sbjct 909 VQSDKTLLLEVDHPLAGRARASIAPFAELERSPEHVHTYRVTPLALWNARAAGHDAEQVV 968 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV YSRYAVP +LVDI DTM RYGRL+L K+P HGL L +LDRAVL EV R K++AP Sbjct 969 DALVRYSRYAVPNAVLVDIADTMDRYGRLRLEKDPVHGLVLRALDRAVLTEVTRAKRVAP 1028 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLGARIDDDTVVVHPSERGR+KQ LLK+GWPAEDLAGYVDGE HPI L Q+GW+LR+YQ+ Sbjct 1029 MLGARIDDDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGEKHPIELRQDGWELREYQK 1088 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A FW GGSGVVVLP GAGKT+VGAAAMA+ GATTLILVTN VA RQW+ EL+ RTSL Sbjct 1089 GAVAGFWEGGSGVVVLPSGAGKTVVGAAAMAQVGATTLILVTNTVAGRQWRNELLRRTSL 1148 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE+EIGE+SGERKEIRPVTI+TYQ++T R KGEY HLELF +RDWGLI+YDEVHLLPAPV Sbjct 1149 TEDEIGEYSGERKEIRPVTIATYQVMTARRKGEYLHLELFGARDWGLIVYDEVHLLPAPV 1208 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTAD+QS+RRLGLTATLIREDGREGDVFSLIGPKRYDAPW++IEAQGWIAPAEC EVR Sbjct 1209 FRMTADIQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWREIEAQGWIAPAECTEVR 1268 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD ERM YA AEPEERYR+CST H+K AVV+ + +H ++ L+IGAYLDQLDELG Sbjct 1269 VTLTDDERMTYAVAEPEERYRMCSTAHSKSAVVRRLAERHAGDRVLIIGAYLDQLDELGR 1328 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 L APVIQGSTR ERE LF+AFR GE+ TLVVSKVAN SIDLPEA VA+QVSGTFGSRQ Sbjct 1329 LLDAPVIQGSTRNKERERLFEAFRTGEITTLVVSKVANVSIDLPEAGVAIQVSGTFGSRQ 1388 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDL 537 EEAQRLGR+LRPK+DG A FY+VV+RD+LD EYAAHRQRFLAEQGY Y I DADD+ Sbjct 1389 EEAQRLGRVLRPKSDGRSAHFYTVVSRDTLDQEYAAHRQRFLAEQGYAYTIVDADDI 1445 Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust. Identities = 38/112 (34%), Positives = 53/112 (48%), Gaps = 4/112 (3%) Query 21 AAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVVDALVSYSRYAVPQPLLVDIV 80 A +A A++E A YR T +L A AG AE + D L +R VPQ L I Sbjct 547 AELARMADIESA-GAATVYRFTESSLRRALDAGSSAEDLHDLLGQLARGGVPQTLTYLID 605 Query 81 DTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAPMLGARIDDDTVV 132 DT R+GRL+ PA L D A+L EV+ ++ + R+ V+ Sbjct 606 DTARRHGRLR--SGPAASY-LRCDDTALLTEVVASRHTQALAMRRVAPTIVI 654 >gi|258654903|ref|YP_003204059.1| helicase domain-containing protein [Nakamurella multipartita DSM 44233] gi|258558128|gb|ACV81070.1| helicase domain protein [Nakamurella multipartita DSM 44233] Length=554 Score = 881 bits (2277), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/542 (81%), Positives = 482/542 (89%), Gaps = 0/542 (0%) Query 1 VQSDKTVLLEVDHELAGAARAAIAPFAELERAPEHVHTYRITPLALWNARAAGHDAEQVV 60 VQSDKT+LLEV H A AARA IAPFAELER+PEHVHTYRITPLALWNARAAGHDAEQVV Sbjct 8 VQSDKTLLLEVSHPDAPAARANIAPFAELERSPEHVHTYRITPLALWNARAAGHDAEQVV 67 Query 61 DALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKNPAHGLTLVSLDRAVLEEVLRNKKIAP 120 DALV +SR+ VPQ LLVD+VDTM+RYGRL L NPAHGL L S DRAVLEE++R+KKIAP Sbjct 68 DALVRWSRFPVPQALLVDVVDTMSRYGRLVLQANPAHGLILASRDRAVLEEIMRHKKIAP 127 Query 121 MLGARIDDDTVVVHPSERGRVKQLLLKIGWPAEDLAGYVDGEAHPISLHQEGWQLRDYQR 180 MLG RID DTV VHPS+RG +KQ LLK+GWPAED AGYVDGEAHPI+L W LR YQ+ Sbjct 128 MLGVRIDPDTVAVHPSQRGHLKQQLLKVGWPAEDEAGYVDGEAHPIALDTTDWSLRSYQQ 187 Query 181 LAADSFWAGGSGVVVLPCGAGKTLVGAAAMAKAGATTLILVTNIVAARQWKRELVARTSL 240 A D FW GGSGVVVLPCGAGKTLVGAAAMAKA ATTLILVTN V+ RQWKREL+ARTSL Sbjct 188 EAVDGFWDGGSGVVVLPCGAGKTLVGAAAMAKAQATTLILVTNTVSGRQWKRELIARTSL 247 Query 241 TENEIGEFSGERKEIRPVTISTYQMITRRTKGEYRHLELFDSRDWGLIIYDEVHLLPAPV 300 TE EIGE+SGERKEIRPVTI+TYQ++TR++ G+YRHL+LFDSRDWGL+IYDEVHLLPAPV Sbjct 248 TEEEIGEYSGERKEIRPVTIATYQVMTRKSGGQYRHLDLFDSRDWGLVIYDEVHLLPAPV 307 Query 301 FRMTADLQSKRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIAPAECVEVR 360 FRMTADLQS+RRLGLTATL+REDGREGDVFSLIGPKRYDAPWKDIE+QGWIAPAEC EVR Sbjct 308 FRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIESQGWIAPAECTEVR 367 Query 361 VTMTDSERMMYATAEPEERYRICSTVHTKIAVVKSILAKHPDEQTLVIGAYLDQLDELGA 420 VT+TD ER+ YATAEPEERY+I ST TK+ VV+++L +HP E TLVIGAYLDQL+ELG Sbjct 368 VTLTDHERLTYATAEPEERYKIASTARTKLPVVRTVLDRHPGEPTLVIGAYLDQLEELGE 427 Query 421 ELGAPVIQGSTRTSEREALFDAFRRGEVATLVVSKVANFSIDLPEAAVAVQVSGTFGSRQ 480 EL AP+IQGSTR +ERE LFDAFR GE+ TLVVSKVANFSIDLP+A VA+QVSGTFGSRQ Sbjct 428 ELQAPIIQGSTRNAERERLFDAFRAGEIKTLVVSKVANFSIDLPDATVAIQVSGTFGSRQ 487 Query 481 EEAQRLGRILRPKADGGGAIFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIRDADDLLGP 540 EEAQRLGR+LRPK DG A FYS+V+RD+LD +YAAHRQRFLAEQGY Y I DADDLLGP Sbjct 488 EEAQRLGRLLRPKGDGRQAHFYSIVSRDTLDTDYAAHRQRFLAEQGYAYRIVDADDLLGP 547 Query 541 AI 542 AI Sbjct 548 AI 549 Lambda K H 0.319 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1195596576366 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40