BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0863 Length=93 Score E Sequences producing significant alignments: (Bits) Value gi|15608003|ref|NP_215378.1| hypothetical protein Rv0863 [Mycoba... 192 2e-47 gi|308231656|ref|ZP_07413324.2| hypothetical protein TMAG_00799 ... 135 2e-30 gi|254818294|ref|ZP_05223295.1| hypothetical protein MintA_00120... 126 1e-27 gi|254773877|ref|ZP_05215393.1| hypothetical protein MaviaA2_042... 124 5e-27 gi|342860476|ref|ZP_08717127.1| hypothetical protein MCOL_16416 ... 124 5e-27 gi|41406899|ref|NP_959735.1| hypothetical protein MAP0801 [Mycob... 123 7e-27 gi|118465512|ref|YP_880252.1| hypothetical protein MAV_0992 [Myc... 123 1e-26 gi|296169626|ref|ZP_06851246.1| conserved hypothetical protein [... 121 4e-26 gi|183984636|ref|YP_001852927.1| hypothetical protein MMAR_4669 ... 120 6e-26 gi|118616161|ref|YP_904493.1| hypothetical protein MUL_0287 [Myc... 119 2e-25 gi|240171423|ref|ZP_04750082.1| hypothetical protein MkanA1_1907... 116 1e-24 gi|15828155|ref|NP_302418.1| hypothetical protein ML2155 [Mycoba... 115 2e-24 gi|120406002|ref|YP_955831.1| hypothetical protein Mvan_5053 [My... 99.8 1e-19 gi|108801446|ref|YP_641643.1| hypothetical protein Mmcs_4483 [My... 94.7 4e-18 gi|333989431|ref|YP_004522045.1| hypothetical protein JDM601_079... 89.0 2e-16 gi|118469962|ref|YP_889937.1| hypothetical protein MSMEG_5704 [M... 79.3 2e-13 gi|169627962|ref|YP_001701611.1| hypothetical protein MAB_0863 [... 78.2 3e-13 gi|296395253|ref|YP_003660137.1| hypothetical protein Srot_2875 ... 76.6 1e-12 gi|317509223|ref|ZP_07966844.1| hypothetical protein HMPREF9336_... 76.3 2e-12 gi|262201207|ref|YP_003272415.1| hypothetical protein Gbro_1226 ... 74.7 4e-12 gi|226308127|ref|YP_002768087.1| hypothetical protein RER_46400 ... 74.3 5e-12 gi|343928193|ref|ZP_08767648.1| hypothetical protein GOALK_110_0... 73.9 8e-12 gi|226364437|ref|YP_002782219.1| hypothetical protein ROP_50270 ... 73.6 1e-11 gi|54022603|ref|YP_116845.1| hypothetical protein nfa6360 [Nocar... 72.8 1e-11 gi|68535485|ref|YP_250190.1| hypothetical protein jk0415 [Coryne... 72.0 3e-11 gi|260579773|ref|ZP_05847629.1| conserved hypothetical protein [... 70.9 6e-11 gi|172041248|ref|YP_001800962.1| hypothetical protein cur_1568 [... 68.6 3e-10 gi|334563727|ref|ZP_08516718.1| hypothetical protein CbovD2_0406... 68.6 3e-10 gi|336324885|ref|YP_004604851.1| hypothetical protein CRES_0324 ... 67.8 5e-10 gi|134097173|ref|YP_001102834.1| hypothetical protein SACE_0562 ... 64.3 5e-09 gi|340793575|ref|YP_004759038.1| hypothetical protein CVAR_0613 ... 63.9 7e-09 gi|326384178|ref|ZP_08205860.1| hypothetical protein SCNU_14641 ... 63.9 8e-09 gi|213966415|ref|ZP_03394593.1| conserved hypothetical protein [... 63.5 1e-08 gi|257057381|ref|YP_003135213.1| hypothetical protein Svir_34220... 63.5 1e-08 gi|302530575|ref|ZP_07282917.1| predicted protein [Streptomyces ... 63.2 1e-08 gi|296138548|ref|YP_003645791.1| hypothetical protein Tpau_0816 ... 61.6 4e-08 gi|300790330|ref|YP_003770621.1| hypothetical protein AMED_8524 ... 60.5 7e-08 gi|38233373|ref|NP_939140.1| hypothetical protein DIP0774 [Coryn... 59.7 1e-07 gi|305681908|ref|ZP_07404712.1| conserved hypothetical protein [... 59.3 2e-07 gi|225023134|ref|ZP_03712326.1| hypothetical protein CORMATOL_03... 58.9 3e-07 gi|308275973|gb|ADO25872.1| Hypothetical protein CpI19_0593 [Cor... 57.4 7e-07 gi|337290256|ref|YP_004629277.1| hypothetical protein CULC22_006... 57.0 8e-07 gi|256374617|ref|YP_003098277.1| hypothetical protein Amir_0464 ... 56.6 1e-06 gi|319948067|ref|ZP_08022240.1| hypothetical protein ES5_02004 [... 56.6 1e-06 gi|258654880|ref|YP_003204036.1| hypothetical protein Namu_4771 ... 55.8 2e-06 gi|25027449|ref|NP_737503.1| hypothetical protein CE0893 [Coryne... 55.8 2e-06 gi|227832583|ref|YP_002834290.1| hypothetical protein cauri_0755... 55.5 2e-06 gi|262182934|ref|ZP_06042355.1| hypothetical protein CaurA7_0297... 54.7 4e-06 gi|227487730|ref|ZP_03918046.1| conserved hypothetical protein [... 54.7 5e-06 gi|227542369|ref|ZP_03972418.1| conserved hypothetical protein [... 54.7 5e-06 >gi|15608003|ref|NP_215378.1| hypothetical protein Rv0863 [Mycobacterium tuberculosis H37Rv] gi|15840276|ref|NP_335313.1| hypothetical protein MT0886 [Mycobacterium tuberculosis CDC1551] gi|31792051|ref|NP_854544.1| hypothetical protein Mb0886 [Mycobacterium bovis AF2122/97] 55 more sequence titles Length=93 Score = 192 bits (487), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 92/93 (99%), Positives = 93/93 (100%), Gaps = 0/93 (0%) Query 1 VCSVIADQRRPDQPCGVGGCKTCQNGFVADIAEGKARKTRYVDHGWPTTDPDDHAVSELV 60 +CSVIADQRRPDQPCGVGGCKTCQNGFVADIAEGKARKTRYVDHGWPTTDPDDHAVSELV Sbjct 1 MCSVIADQRRPDQPCGVGGCKTCQNGFVADIAEGKARKTRYVDHGWPTTDPDDHAVSELV 60 Query 61 TDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 TDRTGALSPFGELTFPVPSDDLPYIHPVTVINR Sbjct 61 TDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 >gi|308231656|ref|ZP_07413324.2| hypothetical protein TMAG_00799 [Mycobacterium tuberculosis SUMu001] gi|308370139|ref|ZP_07420436.2| hypothetical protein TMBG_01756 [Mycobacterium tuberculosis SUMu002] gi|308370520|ref|ZP_07421853.2| hypothetical protein TMCG_03120 [Mycobacterium tuberculosis SUMu003] 20 more sequence titles Length=66 Score = 135 bits (341), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 65/66 (99%), Positives = 66/66 (100%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 +ADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP Sbjct 1 MADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 60 Query 88 VTVINR 93 VTVINR Sbjct 61 VTVINR 66 >gi|254818294|ref|ZP_05223295.1| hypothetical protein MintA_00120 [Mycobacterium intracellulare ATCC 13950] Length=69 Score = 126 bits (316), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 58/67 (87%), Positives = 64/67 (96%), Gaps = 0/67 (0%) Query 27 FVADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIH 86 VAD AEGKARKT+YVD+GWPTTDPDDHAVSELVTDRTGALSPFGELTFP+PS +LPY+H Sbjct 3 LVADTAEGKARKTKYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELTFPLPSTELPYLH 62 Query 87 PVTVINR 93 PVTV+NR Sbjct 63 PVTVVNR 69 >gi|254773877|ref|ZP_05215393.1| hypothetical protein MaviaA2_04272 [Mycobacterium avium subsp. avium ATCC 25291] gi|336461257|gb|EGO40132.1| hypothetical protein MAPs_32630 [Mycobacterium avium subsp. paratuberculosis S397] Length=69 Score = 124 bits (311), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 57/66 (87%), Positives = 63/66 (96%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 VADIAEGKARK RYVD+GWPTTDPDDHAVSELVTDRTGALSPFGEL FP+P+ +LPY+HP Sbjct 4 VADIAEGKARKNRYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELVFPLPATELPYLHP 63 Query 88 VTVINR 93 VTV+NR Sbjct 64 VTVVNR 69 >gi|342860476|ref|ZP_08717127.1| hypothetical protein MCOL_16416 [Mycobacterium colombiense CECT 3035] gi|342132131|gb|EGT85372.1| hypothetical protein MCOL_16416 [Mycobacterium colombiense CECT 3035] Length=66 Score = 124 bits (310), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 57/66 (87%), Positives = 63/66 (96%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 +AD AEGKARKT+YVD+GWPTTDPDDHAVSELVTDRTGALSPFGEL FP+PS DLPY+HP Sbjct 1 MADTAEGKARKTKYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELVFPLPSTDLPYLHP 60 Query 88 VTVINR 93 VTV+NR Sbjct 61 VTVVNR 66 >gi|41406899|ref|NP_959735.1| hypothetical protein MAP0801 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395249|gb|AAS03118.1| hypothetical protein MAP_0801 [Mycobacterium avium subsp. paratuberculosis K-10] Length=87 Score = 123 bits (309), Expect = 7e-27, Method: Compositional matrix adjust. Identities = 57/66 (87%), Positives = 63/66 (96%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 VADIAEGKARK RYVD+GWPTTDPDDHAVSELVTDRTGALSPFGEL FP+P+ +LPY+HP Sbjct 22 VADIAEGKARKNRYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELVFPLPATELPYLHP 81 Query 88 VTVINR 93 VTV+NR Sbjct 82 VTVVNR 87 >gi|118465512|ref|YP_880252.1| hypothetical protein MAV_0992 [Mycobacterium avium 104] gi|118166799|gb|ABK67696.1| conserved hypothetical protein [Mycobacterium avium 104] Length=66 Score = 123 bits (308), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 56/66 (85%), Positives = 63/66 (96%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 +ADIAEGKARK RYVD+GWPTTDPDDHAVSELVTDRTGALSPFGEL FP+P+ +LPY+HP Sbjct 1 MADIAEGKARKNRYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELVFPLPATELPYLHP 60 Query 88 VTVINR 93 VTV+NR Sbjct 61 VTVVNR 66 >gi|296169626|ref|ZP_06851246.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895892|gb|EFG75587.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=66 Score = 121 bits (303), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 56/66 (85%), Positives = 61/66 (93%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 +AD AEGKARKTRYVD+GWPTTD DDHAVSEL TDRTGALSPFGEL FP+PS DLPY+HP Sbjct 1 MADTAEGKARKTRYVDNGWPTTDQDDHAVSELATDRTGALSPFGELVFPLPSTDLPYLHP 60 Query 88 VTVINR 93 VTV+NR Sbjct 61 VTVVNR 66 >gi|183984636|ref|YP_001852927.1| hypothetical protein MMAR_4669 [Mycobacterium marinum M] gi|183177962|gb|ACC43072.1| conserved hypothetical protein [Mycobacterium marinum M] Length=69 Score = 120 bits (302), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 55/66 (84%), Positives = 63/66 (96%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 VADIAEGKA K++YVD+GWPTTDPDDHAVSELVTDRTGALSPFGE+ FP+ +DDLPY+HP Sbjct 4 VADIAEGKAGKSKYVDNGWPTTDPDDHAVSELVTDRTGALSPFGEVVFPLAADDLPYLHP 63 Query 88 VTVINR 93 VTV+NR Sbjct 64 VTVVNR 69 >gi|118616161|ref|YP_904493.1| hypothetical protein MUL_0287 [Mycobacterium ulcerans Agy99] gi|118568271|gb|ABL03022.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=69 Score = 119 bits (297), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 54/66 (82%), Positives = 62/66 (94%), Gaps = 0/66 (0%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 VADI EGKA K++YVD+GWPTTDPDDHAVSELVTDRTGALSPFGE+ FP+ +DDLPY+HP Sbjct 4 VADITEGKAGKSKYVDNGWPTTDPDDHAVSELVTDRTGALSPFGEVVFPLAADDLPYLHP 63 Query 88 VTVINR 93 VTV+NR Sbjct 64 VTVVNR 69 >gi|240171423|ref|ZP_04750082.1| hypothetical protein MkanA1_19071 [Mycobacterium kansasii ATCC 12478] Length=68 Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 52/61 (86%), Positives = 59/61 (97%), Gaps = 0/61 (0%) Query 33 EGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 +GKARKT+YVD+GWPTTDPDDHAVSELVTDRTGALSPFGEL FP+ +DDLPY+HPVTV+N Sbjct 8 DGKARKTKYVDNGWPTTDPDDHAVSELVTDRTGALSPFGELAFPLAADDLPYLHPVTVVN 67 Query 93 R 93 R Sbjct 68 R 68 >gi|15828155|ref|NP_302418.1| hypothetical protein ML2155 [Mycobacterium leprae TN] gi|221230632|ref|YP_002504048.1| hypothetical 10.1 kda protein [Mycobacterium leprae Br4923] gi|13093709|emb|CAC31110.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933739|emb|CAR72252.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=74 Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 54/74 (73%), Positives = 62/74 (84%), Gaps = 0/74 (0%) Query 20 CKTCQNGFVADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPS 79 K+ VADIA+ KA K+RYVD+GWPTTDPD HAVSELVTD GALSPFG+L FPVP+ Sbjct 1 MKSVNYYVVADIAKSKAHKSRYVDNGWPTTDPDHHAVSELVTDCAGALSPFGDLVFPVPA 60 Query 80 DDLPYIHPVTVINR 93 DDLPY+HPVTV+NR Sbjct 61 DDLPYVHPVTVVNR 74 >gi|120406002|ref|YP_955831.1| hypothetical protein Mvan_5053 [Mycobacterium vanbaalenii PYR-1] gi|119958820|gb|ABM15825.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=61 Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 45/57 (79%), Positives = 52/57 (92%), Gaps = 0/57 (0%) Query 37 RKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 +K RYVD GWPTTDPDDHAVSEL TDRTGALSPFG++TFP+P+D+LP+I VTVINR Sbjct 5 KKNRYVDPGWPTTDPDDHAVSELATDRTGALSPFGDVTFPLPADELPFIQAVTVINR 61 >gi|108801446|ref|YP_641643.1| hypothetical protein Mmcs_4483 [Mycobacterium sp. MCS] gi|119870599|ref|YP_940551.1| hypothetical protein Mkms_4570 [Mycobacterium sp. KMS] gi|126437431|ref|YP_001073122.1| hypothetical protein Mjls_4866 [Mycobacterium sp. JLS] gi|108771865|gb|ABG10587.1| hypothetical protein Mmcs_4483 [Mycobacterium sp. MCS] gi|119696688|gb|ABL93761.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237231|gb|ABO00632.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=85 Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 48/72 (67%), Positives = 56/72 (78%), Gaps = 5/72 (6%) Query 23 CQNGFVADIAEGKARKTRYVDHGWPT-TDPDDHAVSELVTDRTGALSPFGELTFPVPSDD 81 C N VAD K K +YVD GWPT D D+HAVSEL TDR GALSPFG+LTFP+P+D+ Sbjct 18 CHNVGVAD----KKSKKQYVDPGWPTHLDGDEHAVSELATDRVGALSPFGDLTFPLPADE 73 Query 82 LPYIHPVTVINR 93 LPY+HPVTV+NR Sbjct 74 LPYLHPVTVVNR 85 >gi|333989431|ref|YP_004522045.1| hypothetical protein JDM601_0791 [Mycobacterium sp. JDM601] gi|333485399|gb|AEF34791.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=62 Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 41/63 (66%), Positives = 51/63 (81%), Gaps = 1/63 (1%) Query 31 IAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTV 90 +A + +K RYVD+GWP TD + AVSEL TDR GALSPFG L FP+PS++LPY+HPVTV Sbjct 1 MAANQDKKNRYVDNGWPETD-GEPAVSELRTDRAGALSPFGSLVFPLPSEELPYLHPVTV 59 Query 91 INR 93 +NR Sbjct 60 VNR 62 >gi|118469962|ref|YP_889937.1| hypothetical protein MSMEG_5704 [Mycobacterium smegmatis str. MC2 155] gi|118171249|gb|ABK72145.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=65 Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 35/58 (61%), Positives = 49/58 (85%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPT-TDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 +K +YVD+GWPT + DDHAV+EL +DRTGALSPFG++ FP+P++ LP++ VTV+NR Sbjct 8 KKKQYVDNGWPTLSGDDDHAVTELASDRTGALSPFGDVVFPLPAEQLPFLPAVTVVNR 65 >gi|169627962|ref|YP_001701611.1| hypothetical protein MAB_0863 [Mycobacterium abscessus ATCC 19977] gi|169239929|emb|CAM60957.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=57 Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/58 (66%), Positives = 45/58 (78%), Gaps = 2/58 (3%) Query 36 ARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 A K +YVD+GWP +HAVSEL DRTGALSPFG+L FPV S +PY+HPVTVIN+ Sbjct 2 ADKEQYVDNGWPAHVDGEHAVSELAADRTGALSPFGDLEFPVES--VPYVHPVTVINK 57 >gi|296395253|ref|YP_003660137.1| hypothetical protein Srot_2875 [Segniliparus rotundus DSM 44985] gi|296182400|gb|ADG99306.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=58 Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 36/59 (62%), Positives = 42/59 (72%), Gaps = 3/59 (5%) Query 34 GKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 GK+ K RYVD GWP D H V+EL TD +GALSPFGE FP+P + LPY+HP T IN Sbjct 2 GKSEKERYVDPGWPQRD---HPVTELATDWSGALSPFGETEFPLPGESLPYVHPSTQIN 57 >gi|317509223|ref|ZP_07966844.1| hypothetical protein HMPREF9336_03216 [Segniliparus rugosus ATCC BAA-974] gi|316252433|gb|EFV11882.1| hypothetical protein HMPREF9336_03216 [Segniliparus rugosus ATCC BAA-974] Length=61 Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 36/60 (60%), Positives = 43/60 (72%), Gaps = 3/60 (5%) Query 34 GKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 GK+ K +YVD GWP + H VSEL TD +GALSPFGE FP+P +LPY+HP T INR Sbjct 5 GKSEKQQYVDAGWPKRE---HPVSELATDWSGALSPFGETEFPLPVVELPYVHPSTQINR 61 >gi|262201207|ref|YP_003272415.1| hypothetical protein Gbro_1226 [Gordonia bronchialis DSM 43247] gi|262084554|gb|ACY20522.1| hypothetical protein Gbro_1226 [Gordonia bronchialis DSM 43247] Length=84 Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 34/63 (54%), Positives = 46/63 (74%), Gaps = 1/63 (1%) Query 31 IAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTV 90 +A K K RYVD+GWP D +HAVSE T+ +GALSP+G++ FP+P D+LP++ TV Sbjct 23 VATAKHSKKRYVDNGWPFDD-GEHAVSEFATNISGALSPYGDVEFPLPLDELPFVQSKTV 81 Query 91 INR 93 INR Sbjct 82 INR 84 >gi|226308127|ref|YP_002768087.1| hypothetical protein RER_46400 [Rhodococcus erythropolis PR4] gi|226187244|dbj|BAH35348.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=62 Score = 74.3 bits (181), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 37/57 (65%), Positives = 41/57 (72%), Gaps = 1/57 (1%) Query 38 KTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGE-LTFPVPSDDLPYIHPVTVINR 93 K YVD GWP T DHAV+EL + R G LSPFGE TFPVP + LPY+HP TVINR Sbjct 6 KQHYVDPGWPETADGDHAVTELSSTRAGGLSPFGEDTTFPVPVESLPYVHPHTVINR 62 >gi|343928193|ref|ZP_08767648.1| hypothetical protein GOALK_110_00340 [Gordonia alkanivorans NBRC 16433] gi|343761891|dbj|GAA14574.1| hypothetical protein GOALK_110_00340 [Gordonia alkanivorans NBRC 16433] Length=76 Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 40/76 (53%), Positives = 49/76 (65%), Gaps = 5/76 (6%) Query 22 TCQNGFVADIAEGKARKTRYVDHGWPTTDPD----DHAVSELVTDRTGALSPFGELTFPV 77 N VA+ + KA K YVD+GWP D D DHAVSEL T +GALSPFG+ FP+ Sbjct 2 AWHNAPVANNSGDKADKKHYVDNGWPK-DEDGNHPDHAVSELATHISGALSPFGDTQFPL 60 Query 78 PSDDLPYIHPVTVINR 93 P DDLP++ TV+NR Sbjct 61 PVDDLPFVQSKTVVNR 76 >gi|226364437|ref|YP_002782219.1| hypothetical protein ROP_50270 [Rhodococcus opacus B4] gi|226242926|dbj|BAH53274.1| hypothetical protein [Rhodococcus opacus B4] Length=62 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/57 (64%), Positives = 42/57 (74%), Gaps = 1/57 (1%) Query 38 KTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELT-FPVPSDDLPYIHPVTVINR 93 K +YVD GWP T DHAV+EL + R G LSPFGE T FP+P++ LPY HP TVINR Sbjct 6 KKQYVDPGWPETADGDHAVTELSSTRAGGLSPFGEDTEFPLPAESLPYAHPHTVINR 62 >gi|54022603|ref|YP_116845.1| hypothetical protein nfa6360 [Nocardia farcinica IFM 10152] gi|54014111|dbj|BAD55481.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=62 Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 36/57 (64%), Positives = 40/57 (71%), Gaps = 1/57 (1%) Query 38 KTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELT-FPVPSDDLPYIHPVTVINR 93 K YVD+GWP DHAV+EL R G LSPFGE T FPVP++ LPY HP TVINR Sbjct 6 KKPYVDNGWPKVADGDHAVTELAASRAGNLSPFGEDTEFPVPAEQLPYRHPYTVINR 62 >gi|68535485|ref|YP_250190.1| hypothetical protein jk0415 [Corynebacterium jeikeium K411] gi|68263084|emb|CAI36572.1| hypothetical protein jk0415 [Corynebacterium jeikeium K411] Length=68 Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 34/65 (53%), Positives = 43/65 (67%), Gaps = 1/65 (1%) Query 30 DIAEGKARKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPV 88 D K YVD GWPT P+ HAV+ELV D GALSP+G++ FPV + +LPY+H Sbjct 4 DTTMANVEKKGYVDAGWPTDIPEGRHAVTELVADTAGALSPYGDIEFPVDASELPYVHSF 63 Query 89 TVINR 93 TVIN+ Sbjct 64 TVINK 68 >gi|260579773|ref|ZP_05847629.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] gi|258602097|gb|EEW15418.1| conserved hypothetical protein [Corynebacterium jeikeium ATCC 43734] Length=62 Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 33/61 (55%), Positives = 42/61 (69%), Gaps = 1/61 (1%) Query 34 GKARKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 K YVD GWPT P+ HAV+ELV D GALSP+G++ FPV + +LPY+H TVIN Sbjct 2 ANVEKKGYVDAGWPTDIPEGRHAVTELVADTAGALSPYGDIEFPVDASELPYVHSFTVIN 61 Query 93 R 93 + Sbjct 62 K 62 >gi|172041248|ref|YP_001800962.1| hypothetical protein cur_1568 [Corynebacterium urealyticum DSM 7109] gi|171852552|emb|CAQ05528.1| hypothetical protein cu1568 [Corynebacterium urealyticum DSM 7109] Length=63 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 34/58 (59%), Positives = 41/58 (71%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPTTDPD-DHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 +K YVD WPT P+ HAV+ELV GALSP+GE+ +PV S LPY+HP TVINR Sbjct 6 KKKGYVDPAWPTDIPEGQHAVTELVAFSAGALSPYGEIEWPVDSSTLPYVHPDTVINR 63 >gi|334563727|ref|ZP_08516718.1| hypothetical protein CbovD2_04065 [Corynebacterium bovis DSM 20582] Length=66 Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 31/60 (52%), Positives = 40/60 (67%), Gaps = 1/60 (1%) Query 34 GKARKTRYVDHGWPT-TDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 K YVD GWP P +HAV+E+V D GALSP+G++ FPVP++ LPY+HP T N Sbjct 2 ANVEKKYYVDPGWPKDLAPGEHAVTEIVADTAGALSPYGDIEFPVPAESLPYVHPYTRTN 61 >gi|336324885|ref|YP_004604851.1| hypothetical protein CRES_0324 [Corynebacterium resistens DSM 45100] gi|336100867|gb|AEI08687.1| hypothetical protein CRES_0324 [Corynebacterium resistens DSM 45100] Length=68 Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 36/64 (57%), Positives = 43/64 (68%), Gaps = 3/64 (4%) Query 33 EGKA--RKTRYVDHGWPTTDPD-DHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVT 89 EG A +K YVD GWP+ P+ HAV+ELV GALSPFG+L FP+ L Y+HP T Sbjct 5 EGMANVKKKGYVDAGWPSDIPEGQHAVTELVASSAGALSPFGDLEFPLDPATLSYVHPHT 64 Query 90 VINR 93 VINR Sbjct 65 VINR 68 >gi|134097173|ref|YP_001102834.1| hypothetical protein SACE_0562 [Saccharopolyspora erythraea NRRL 2338] gi|291005370|ref|ZP_06563343.1| hypothetical protein SeryN2_12692 [Saccharopolyspora erythraea NRRL 2338] gi|133909796|emb|CAL99908.1| hypothetical protein SACE_0562 [Saccharopolyspora erythraea NRRL 2338] Length=61 Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/60 (49%), Positives = 41/60 (69%), Gaps = 1/60 (1%) Query 34 GKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 GK +K R +D WP +H VSE + D+ GALSPFG+ +FP+ ++ +PY HPVT IN+ Sbjct 3 GKTKKDR-IDPSWPKVGDGEHPVSEFLADKQGALSPFGDTSFPLSTETVPYTHPVTKINK 61 >gi|340793575|ref|YP_004759038.1| hypothetical protein CVAR_0613 [Corynebacterium variabile DSM 44702] gi|340533485|gb|AEK35965.1| hypothetical protein CVAR_0613 [Corynebacterium variabile DSM 44702] Length=68 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 33/67 (50%), Positives = 44/67 (66%), Gaps = 3/67 (4%) Query 27 FVADIAEGKARKTRYVDHGWPTTDPD-DHAVSELVTDRTGALSPFGELTFPVPSDDLPYI 85 + D+A+ K +VD GWP P+ HAV+EL GALSP+G+L FPVP++ L Y+ Sbjct 1 MMGDMAD--VEKKHFVDPGWPQDVPEGHHAVTELHAADAGALSPYGDLEFPVPAETLHYV 58 Query 86 HPVTVIN 92 HP TVIN Sbjct 59 HPFTVIN 65 >gi|326384178|ref|ZP_08205860.1| hypothetical protein SCNU_14641 [Gordonia neofelifaecis NRRL B-59395] gi|326197043|gb|EGD54235.1| hypothetical protein SCNU_14641 [Gordonia neofelifaecis NRRL B-59395] Length=52 Score = 63.9 bits (154), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 28/52 (54%), Positives = 39/52 (75%), Gaps = 0/52 (0%) Query 42 VDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 +D+GWPT D+HAV+ELV+ GALSP+G+ P P++DLP+I TV+NR Sbjct 1 MDNGWPTEIGDEHAVTELVSHLAGALSPYGDTQLPQPAEDLPFIQSHTVVNR 52 >gi|213966415|ref|ZP_03394593.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] gi|213950935|gb|EEB62339.1| conserved hypothetical protein [Corynebacterium amycolatum SK46] Length=62 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 30/57 (53%), Positives = 38/57 (67%), Gaps = 1/57 (1%) Query 38 KTRYVDHGWPT-TDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 K YVD GWP +P HAV+EL+ GA SPFG++ FPV + L Y+HP TVIN+ Sbjct 6 KKSYVDPGWPKDLEPGQHAVTELIAHHAGADSPFGDIEFPVAPETLGYVHPTTVINK 62 >gi|257057381|ref|YP_003135213.1| hypothetical protein Svir_34220 [Saccharomonospora viridis DSM 43017] gi|256587253|gb|ACU98386.1| hypothetical protein Svir_34220 [Saccharomonospora viridis DSM 43017] Length=72 Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 32/64 (50%), Positives = 41/64 (65%), Gaps = 5/64 (7%) Query 30 DIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVT 89 D+ + RK +D WP + HAV+EL DR GALSPFGE TFP+ S +PY+HP T Sbjct 12 DVGKDDKRKQHRIDPEWPDVE---HAVTELAADRQGALSPFGETTFPLES--VPYVHPKT 66 Query 90 VINR 93 IN+ Sbjct 67 EINK 70 >gi|302530575|ref|ZP_07282917.1| predicted protein [Streptomyces sp. AA4] gi|302439470|gb|EFL11286.1| predicted protein [Streptomyces sp. AA4] Length=70 Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 31/66 (47%), Positives = 45/66 (69%), Gaps = 3/66 (4%) Query 28 VADIAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHP 87 ++ A K K++ +D WP +P +H V+EL +DR GALSPFG+L FP+ + +PY+HP Sbjct 8 ASEEAVAKGDKSKGIDPTWPG-EPGEHPVTELSSDRQGALSPFGDLAFPL--EQVPYVHP 64 Query 88 VTVINR 93 T INR Sbjct 65 ETEINR 70 >gi|296138548|ref|YP_003645791.1| hypothetical protein Tpau_0816 [Tsukamurella paurometabola DSM 20162] gi|296026682|gb|ADG77452.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=62 Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/57 (53%), Positives = 37/57 (65%), Gaps = 3/57 (5%) Query 37 RKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 +K YVD+GWP + DHAVSE GALSPFG++ F P +PY+HP T INR Sbjct 9 KKAGYVDNGWPAAE-GDHAVSEFAAPLVGALSPFGDVAF--PQAHIPYVHPSTRINR 62 >gi|300790330|ref|YP_003770621.1| hypothetical protein AMED_8524 [Amycolatopsis mediterranei U32] gi|299799844|gb|ADJ50219.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] gi|340532012|gb|AEK47217.1| hypothetical protein RAM_43750 [Amycolatopsis mediterranei S699] Length=59 Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 32/63 (51%), Positives = 45/63 (72%), Gaps = 4/63 (6%) Query 31 IAEGKARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTV 90 +A+G+ +K + +D WP D +H V+EL DR GALSPFG++TFP+ D +PY+HP T Sbjct 1 MAKGE-KKHKGIDPTWPGED-GEHPVTELAADRQGALSPFGDVTFPL--DTVPYVHPETE 56 Query 91 INR 93 INR Sbjct 57 INR 59 >gi|38233373|ref|NP_939140.1| hypothetical protein DIP0774 [Corynebacterium diphtheriae NCTC 13129] gi|38199633|emb|CAE49292.1| Conserved hypothetical protein [Corynebacterium diphtheriae] Length=78 Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 30/73 (42%), Positives = 41/73 (57%), Gaps = 1/73 (1%) Query 22 TCQNGFVADIAEGKARKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSD 80 T +GF K YVD GWP P HAV+E+V GA SP+G++ FPVP++ Sbjct 6 TLASGFETIEPMSNMEKKGYVDPGWPKHVPGGGHAVTEMVAKVAGANSPWGDIEFPVPAE 65 Query 81 DLPYIHPVTVINR 93 Y+HP T +N+ Sbjct 66 QTGYVHPYTRVNK 78 >gi|305681908|ref|ZP_07404712.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] gi|305658381|gb|EFM47884.1| conserved hypothetical protein [Corynebacterium matruchotii ATCC 14266] Length=62 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 38/58 (66%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 K YVD GWP P H V+E++ GA SP+G++ FPVP+++L Y+HP T IN+ Sbjct 5 EKKGYVDPGWPKQTPGGGHYVTEVLAKFAGANSPYGDVEFPVPAEELGYVHPYTRINK 62 >gi|225023134|ref|ZP_03712326.1| hypothetical protein CORMATOL_03183 [Corynebacterium matruchotii ATCC 33806] gi|224944357|gb|EEG25566.1| hypothetical protein CORMATOL_03183 [Corynebacterium matruchotii ATCC 33806] Length=106 Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 38/58 (66%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 K YVD GWP P H V+E++ GA SP+G++ FPVP+++L Y+HP T IN+ Sbjct 49 EKKGYVDPGWPKQTPGGGHYVTEVLAKFAGANSPYGDVEFPVPAEELGYVHPYTRINK 106 >gi|308275973|gb|ADO25872.1| Hypothetical protein CpI19_0593 [Corynebacterium pseudotuberculosis I19] Length=62 Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 K YVD GWP P HAV+ELV GA SP+G++ PVP+++ Y+HP T +N+ Sbjct 5 EKKGYVDPGWPAHVPGGGHAVTELVAKVAGANSPWGDIELPVPAEETGYVHPYTRVNK 62 >gi|337290256|ref|YP_004629277.1| hypothetical protein CULC22_00645 [Corynebacterium ulcerans BR-AD22] gi|334696376|gb|AEG81173.1| hypothetical protein CULC809_00637 [Corynebacterium ulcerans 809] gi|334698562|gb|AEG83358.1| hypothetical protein CULC22_00645 [Corynebacterium ulcerans BR-AD22] Length=59 Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 27/58 (47%), Positives = 37/58 (64%), Gaps = 1/58 (1%) Query 37 RKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 K YVD GWP P HAV+ELV GA SP+G++ PVP+++ Y+HP T +N+ Sbjct 2 EKKGYVDPGWPAHVPGGGHAVTELVAKVAGANSPWGDIELPVPAEETGYVHPYTRVNK 59 >gi|256374617|ref|YP_003098277.1| hypothetical protein Amir_0464 [Actinosynnema mirum DSM 43827] gi|255918920|gb|ACU34431.1| hypothetical protein Amir_0464 [Actinosynnema mirum DSM 43827] Length=61 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 32/61 (53%), Positives = 36/61 (60%), Gaps = 2/61 (3%) Query 34 GKARKTRYVDHGWPTTDP-DDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 KAR R +D WP HAVSEL +D GALSPFG FP P ++L Y HP T IN Sbjct 2 AKARPER-IDPQWPEAPAGHKHAVSELASDVQGALSPFGGTAFPQPLEELGYHHPSTTIN 60 Query 93 R 93 R Sbjct 61 R 61 >gi|319948067|ref|ZP_08022240.1| hypothetical protein ES5_02004 [Dietzia cinnamea P4] gi|319438272|gb|EFV93219.1| hypothetical protein ES5_02004 [Dietzia cinnamea P4] Length=66 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 26/56 (47%), Positives = 33/56 (59%), Gaps = 0/56 (0%) Query 37 RKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVIN 92 + Y + GWP +H V+EL G LSPFG+ TFP+P + L YIHP T IN Sbjct 5 KNLTYDNPGWPDASYGEHPVTELAALVAGGLSPFGQETFPLPQERLGYIHPYTKIN 60 >gi|258654880|ref|YP_003204036.1| hypothetical protein Namu_4771 [Nakamurella multipartita DSM 44233] gi|258558105|gb|ACV81047.1| hypothetical protein Namu_4771 [Nakamurella multipartita DSM 44233] Length=58 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/58 (50%), Positives = 37/58 (64%), Gaps = 2/58 (3%) Query 36 ARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFGELTFPVPSDDLPYIHPVTVINR 93 A++ + VD WP H V+EL TD GALSPFG++ FP+ PY+HP TVINR Sbjct 3 AKRGKGVDPTWPVLPDGQHPVTELNTDVQGALSPFGDVEFPL--RHTPYVHPTTVINR 58 >gi|25027449|ref|NP_737503.1| hypothetical protein CE0893 [Corynebacterium efficiens YS-314] gi|259507146|ref|ZP_05750046.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|23492731|dbj|BAC17703.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] gi|259165269|gb|EEW49823.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=66 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 28/59 (48%), Positives = 38/59 (65%), Gaps = 2/59 (3%) Query 37 RKTRYVDHGWPTTDPDD-HAVSELVTDRTGALSPFGE-LTFPVPSDDLPYIHPVTVINR 93 K YVD WP DP + H V+EL+ GA SP+G+ + FPVP++ + Y+HP T INR Sbjct 8 EKKGYVDPAWPDHDPSEGHVVTELIAPYAGASSPWGDDMEFPVPAETIGYVHPYTRINR 66 >gi|227832583|ref|YP_002834290.1| hypothetical protein cauri_0755 [Corynebacterium aurimucosum ATCC 700975] gi|227453599|gb|ACP32352.1| hypothetical protein cauri_0755 [Corynebacterium aurimucosum ATCC 700975] Length=76 Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 24/54 (45%), Positives = 34/54 (63%), Gaps = 1/54 (1%) Query 41 YVDHGWPTTDPDDHAVSELVTDRTGALSPFG-ELTFPVPSDDLPYIHPVTVINR 93 +V WP P +HA++EL GA SP+G +L P+P++ L Y+HP T INR Sbjct 23 FVSPAWPKNSPREHAITELTAPFAGASSPYGDDLILPMPAEKLNYVHPYTRINR 76 >gi|262182934|ref|ZP_06042355.1| hypothetical protein CaurA7_02975 [Corynebacterium aurimucosum ATCC 700975] Length=61 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 24/54 (45%), Positives = 34/54 (63%), Gaps = 1/54 (1%) Query 41 YVDHGWPTTDPDDHAVSELVTDRTGALSPFG-ELTFPVPSDDLPYIHPVTVINR 93 +V WP P +HA++EL GA SP+G +L P+P++ L Y+HP T INR Sbjct 8 FVSPAWPKNSPREHAITELTAPFAGASSPYGDDLILPMPAEKLNYVHPYTRINR 61 >gi|227487730|ref|ZP_03918046.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092232|gb|EEI27544.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51867] Length=75 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 1/60 (1%) Query 35 KARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFG-ELTFPVPSDDLPYIHPVTVINR 93 K K YVD GW P H V+E++ GA+SPFG E FP P ++ Y+HPVT IN Sbjct 16 KPAKKGYVDPGWGDHAPGQHPVTEIIATVNGAMSPFGNETDFPRPYEETGYVHPVTNINH 75 >gi|227542369|ref|ZP_03972418.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181567|gb|EEI62539.1| conserved hypothetical protein [Corynebacterium glucuronolyticum ATCC 51866] Length=89 Score = 54.7 bits (130), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 28/60 (47%), Positives = 35/60 (59%), Gaps = 1/60 (1%) Query 35 KARKTRYVDHGWPTTDPDDHAVSELVTDRTGALSPFG-ELTFPVPSDDLPYIHPVTVINR 93 K K YVD GW P H V+E++ GA+SPFG E FP P ++ Y+HPVT IN Sbjct 30 KPAKKGYVDPGWGDHAPGQHPVTEIIATVNGAMSPFGNETDFPRPYEETGYVHPVTNINH 89 Lambda K H 0.319 0.139 0.452 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 127811470620 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40