BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0867c Length=407 Score E Sequences producing significant alignments: (Bits) Value gi|15608007|ref|NP_215382.1| resuscitation-promoting factor RpfA... 744 0.0 gi|121636790|ref|YP_977013.1| putative resuscitation-promoting f... 742 0.0 gi|339293881|gb|AEJ45992.1| resuscitation-promoting factor rpfA ... 741 0.0 gi|289442276|ref|ZP_06432020.1| resuscitation-promoting factor r... 704 0.0 gi|289555352|ref|ZP_06444562.1| resuscitation-promoting factor r... 677 0.0 gi|289756953|ref|ZP_06516331.1| predicted protein [Mycobacterium... 665 0.0 gi|289573489|ref|ZP_06453716.1| resuscitation-promoting factor r... 459 4e-127 gi|289446432|ref|ZP_06436176.1| resuscitation-promoting factor R... 457 2e-126 gi|340625881|ref|YP_004744333.1| putative resuscitation-promotin... 449 4e-124 gi|254231175|ref|ZP_04924502.1| resuscitation-promoting factor r... 377 2e-102 gi|289749387|ref|ZP_06508765.1| predicted protein [Mycobacterium... 327 3e-87 gi|306787900|ref|ZP_07426222.1| hypothetical protein TMDG_02637 ... 325 9e-87 gi|306966904|ref|ZP_07479565.1| hypothetical protein TMIG_03422 ... 321 1e-85 gi|306792241|ref|ZP_07430543.1| hypothetical protein TMEG_00748 ... 320 2e-85 gi|289752922|ref|ZP_06512300.1| resuscitation-promoting factor r... 320 2e-85 gi|289744593|ref|ZP_06503971.1| predicted protein [Mycobacterium... 320 3e-85 gi|306782094|ref|ZP_07420431.1| resuscitation-promoting factor r... 318 7e-85 gi|306774991|ref|ZP_07413328.1| hypothetical protein TMAG_00803 ... 317 2e-84 gi|306783535|ref|ZP_07421857.1| hypothetical protein TMCG_03124 ... 317 3e-84 gi|307083387|ref|ZP_07492500.1| hypothetical protein TMLG_01564 ... 316 4e-84 gi|306802526|ref|ZP_07439194.1| hypothetical protein TMHG_00037 ... 316 5e-84 gi|307078827|ref|ZP_07487997.1| hypothetical protein TMKG_03580 ... 309 5e-82 gi|323720690|gb|EGB29767.1| resuscitation-promoting factor RpfA ... 306 3e-81 gi|306796639|ref|ZP_07434941.1| hypothetical protein TMFG_02677 ... 306 3e-81 gi|306971099|ref|ZP_07483760.1| hypothetical protein TMJG_02533 ... 306 4e-81 gi|31792055|ref|NP_854548.1| resuscitation-promoting factor RpfA... 291 2e-76 gi|306806708|ref|ZP_07443376.1| hypothetical protein TMGG_02932 ... 289 5e-76 gi|183984632|ref|YP_001852923.1| resuscitation-promoting factor ... 249 5e-64 gi|240171976|ref|ZP_04750635.1| resuscitation-promoting factor R... 239 6e-61 gi|118616157|ref|YP_904489.1| resuscitation-promoting factor Rpf... 239 8e-61 gi|296169633|ref|ZP_06851251.1| conserved hypothetical protein [... 222 8e-56 gi|342860480|ref|ZP_08717131.1| hypothetical protein MCOL_16436 ... 213 4e-53 gi|126437427|ref|YP_001073118.1| transglycosylase domain-contain... 208 1e-51 gi|108801442|ref|YP_641639.1| transglycosylase-like protein [Myc... 208 1e-51 gi|254823207|ref|ZP_05228208.1| hypothetical protein MintA_24979... 205 1e-50 gi|15828154|ref|NP_302417.1| hypothetical protein ML2151 [Mycoba... 202 6e-50 gi|41406903|ref|NP_959739.1| hypothetical protein MAP0805c [Myco... 202 7e-50 gi|298524360|ref|ZP_07011769.1| conserved hypothetical protein [... 200 4e-49 gi|118472292|ref|YP_889933.1| hypothetical protein MSMEG_5700 [M... 200 4e-49 gi|333989435|ref|YP_004522049.1| resuscitation-promoting factor ... 199 7e-49 gi|120405998|ref|YP_955827.1| FHA domain-containing protein [Myc... 184 3e-44 gi|296395237|ref|YP_003660121.1| transglycosylase [Segniliparus ... 182 1e-43 gi|145222295|ref|YP_001132973.1| transglycosylase domain-contain... 181 3e-43 gi|323720731|gb|EGB29807.1| resuscitation-promoting factor rpfA ... 180 4e-43 gi|315442729|ref|YP_004075608.1| transglycosylase-like protein [... 179 5e-43 gi|317509218|ref|ZP_07966839.1| transglycosylase domain-containi... 176 6e-42 gi|326384177|ref|ZP_08205859.1| transglycosylase domain-containi... 174 3e-41 gi|336461253|gb|EGO40128.1| transglycosylase-like protein [Mycob... 172 1e-40 gi|308378744|ref|ZP_07483759.2| hypothetical protein TMJG_02532 ... 171 3e-40 gi|312138406|ref|YP_004005742.1| resuscitation-promoting factor ... 167 3e-39 >gi|15608007|ref|NP_215382.1| resuscitation-promoting factor RpfA [Mycobacterium tuberculosis H37Rv] gi|15840280|ref|NP_335317.1| hypothetical protein MT0890 [Mycobacterium tuberculosis CDC1551] gi|148660644|ref|YP_001282167.1| putative resuscitation-promoting factor RpfA [Mycobacterium tuberculosis H37Ra] 22 more sequence titles Length=407 Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/407 (100%), Positives = 407/407 (100%), Gaps = 0/407 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 >gi|121636790|ref|YP_977013.1| putative resuscitation-promoting factor rpfA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989261|ref|YP_002643948.1| putative resuscitation-promoting factor [Mycobacterium bovis BCG str. Tokyo 172] gi|121492437|emb|CAL70905.1| Possible resuscitation-promoting factor rpfA [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772374|dbj|BAH25180.1| putative resuscitation-promoting factor [Mycobacterium bovis BCG str. Tokyo 172] gi|341600806|emb|CCC63477.1| possible resuscitation-promoting factor rpfA [Mycobacterium bovis BCG str. Moreau RDJ] Length=407 Score = 742 bits (1916), Expect = 0.0, Method: Compositional matrix adjust. Identities = 406/407 (99%), Positives = 407/407 (100%), Gaps = 0/407 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPA+LAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPAELAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 >gi|339293881|gb|AEJ45992.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis CCDC5079] Length=407 Score = 741 bits (1913), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/407 (99%), Positives = 407/407 (100%), Gaps = 0/407 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNG+PAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGKPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPAD+APPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA Sbjct 181 DPAPPADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 >gi|289442276|ref|ZP_06432020.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis T46] gi|289415195|gb|EFD12435.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis T46] Length=408 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 388/388 (100%), Positives = 388/388 (100%), Gaps = 0/388 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRA 388 GDVTEAPAETPQVSNIAYTKKLWQAIRA Sbjct 361 GDVTEAPAETPQVSNIAYTKKLWQAIRA 388 >gi|289555352|ref|ZP_06444562.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis KZN 605] gi|289439984|gb|EFD22477.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis KZN 605] Length=376 Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/376 (100%), Positives = 376/376 (100%), Gaps = 0/376 (0%) Query 32 MAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLAS 91 MAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLAS Sbjct 1 MAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLAS 60 Query 92 REQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAP 151 REQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAP Sbjct 61 REQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAP 120 Query 152 PPADPAPPVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPL 211 PPADPAPPVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPL Sbjct 121 PPADPAPPVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPL 180 Query 212 GEPLPAAPADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL 271 GEPLPAAPADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL Sbjct 181 GEPLPAAPADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL 240 Query 272 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP 331 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP Sbjct 241 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP 300 Query 332 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV 391 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV Sbjct 301 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV 360 Query 392 CGNDALDSLAQPYVIG 407 CGNDALDSLAQPYVIG Sbjct 361 CGNDALDSLAQPYVIG 376 >gi|289756953|ref|ZP_06516331.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712517|gb|EFD76529.1| predicted protein [Mycobacterium tuberculosis T85] Length=382 Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/369 (100%), Positives = 369/369 (100%), Gaps = 0/369 (0%) Query 39 ATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAV 98 ATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAV Sbjct 14 ATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAV 73 Query 99 GERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAP 158 GERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAP Sbjct 74 GERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAP 133 Query 159 PVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAA 218 PVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAA Sbjct 134 PVELAANDLPAPLGEPLPAAPADPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAA 193 Query 219 PADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAEL 278 PADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAEL Sbjct 194 PADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAEL 253 Query 279 APPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGP 338 APPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGP Sbjct 254 APPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGP 313 Query 339 VGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALD 398 VGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALD Sbjct 314 VGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALD 373 Query 399 SLAQPYVIG 407 SLAQPYVIG Sbjct 374 SLAQPYVIG 382 >gi|289573489|ref|ZP_06453716.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis K85] gi|289537920|gb|EFD42498.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis K85] Length=399 Score = 459 bits (1181), Expect = 4e-127, Method: Compositional matrix adjust. Identities = 396/407 (98%), Positives = 396/407 (98%), Gaps = 8/407 (1%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPA P PADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPA--------DPAPPADLAPPA 232 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 233 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 292 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 293 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 352 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 353 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 399 >gi|289446432|ref|ZP_06436176.1| resuscitation-promoting factor RpfA [Mycobacterium tuberculosis CPHL_A] gi|289419390|gb|EFD16591.1| resuscitation-promoting factor RpfA [Mycobacterium tuberculosis CPHL_A] Length=399 Score = 457 bits (1176), Expect = 2e-126, Method: Compositional matrix adjust. Identities = 395/407 (98%), Positives = 395/407 (98%), Gaps = 8/407 (1%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPA P PADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPA--------DPAPPADLAPPA 232 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 233 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 292 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 293 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 352 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAY KKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 353 GDVTEAPAETPQVSNIAYKKKLWQAIRAQDVCGNDALDSLAQPYVIG 399 >gi|340625881|ref|YP_004744333.1| putative resuscitation-promoting factor RPFA [Mycobacterium canettii CIPT 140010059] gi|340004071|emb|CCC43207.1| putative resuscitation-promoting factor RPFA [Mycobacterium canettii CIPT 140010059] Length=406 Score = 449 bits (1155), Expect = 4e-124, Method: Compositional matrix adjust. Identities = 387/407 (96%), Positives = 391/407 (97%), Gaps = 1/407 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEP A P PAPADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEP-LPAAPAELAPPADLAPAPADLAPPA 239 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PA+LAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPA ADLAPPAPA+LA Sbjct 240 PAELAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPAPADLAPPAPAELA 299 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPP 360 PPAPA+LAPPAPA+LAPPAAVNEQTAP DQPATAPGGPVGLATDLELPEPDPQPADAPPP Sbjct 300 PPAPADLAPPAPAELAPPAAVNEQTAPSDQPATAPGGPVGLATDLELPEPDPQPADAPPP 359 Query 361 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 360 GDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 406 >gi|254231175|ref|ZP_04924502.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis C] gi|124600234|gb|EAY59244.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis C] Length=410 Score = 377 bits (969), Expect = 2e-102, Method: Compositional matrix adjust. Identities = 354/354 (100%), Positives = 354/354 (100%), Gaps = 0/354 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP 354 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP 354 >gi|289749387|ref|ZP_06508765.1| predicted protein [Mycobacterium tuberculosis T92] gi|289689974|gb|EFD57403.1| predicted protein [Mycobacterium tuberculosis T92] Length=356 Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust. Identities = 328/328 (100%), Positives = 328/328 (100%), Gaps = 0/328 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPA 240 Query 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA Sbjct 241 PADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLA 300 Query 301 PPAPAELAPPAPADLAPPAAVNEQTAPG 328 PPAPAELAPPAPADLAPPAAVNEQTAPG Sbjct 301 PPAPAELAPPAPADLAPPAAVNEQTAPG 328 >gi|306787900|ref|ZP_07426222.1| hypothetical protein TMDG_02637 [Mycobacterium tuberculosis SUMu004] gi|308335461|gb|EFP24312.1| hypothetical protein TMDG_02637 [Mycobacterium tuberculosis SUMu004] Length=237 Score = 325 bits (833), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 215/239 (90%), Positives = 216/239 (91%), Gaps = 2/239 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEP A Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEP-LPAAP 179 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPP 239 P P PPVELAVNDLPAPLGEPLPAAPA+ APPADLA PA ADLAPP Sbjct 180 ADPAPPADLAPPAPADCPPVELAVNDLPAPLGEPLPAAPAELAPPADLA-PASADLAPP 237 >gi|306966904|ref|ZP_07479565.1| hypothetical protein TMIG_03422 [Mycobacterium tuberculosis SUMu009] gi|308355399|gb|EFP44250.1| hypothetical protein TMIG_03422 [Mycobacterium tuberculosis SUMu009] Length=228 Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust. Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 >gi|306792241|ref|ZP_07430543.1| hypothetical protein TMEG_00748 [Mycobacterium tuberculosis SUMu005] gi|308339259|gb|EFP28110.1| hypothetical protein TMEG_00748 [Mycobacterium tuberculosis SUMu005] Length=156 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADP 156 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADP Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADP 156 >gi|289752922|ref|ZP_06512300.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis EAS054] gi|289693509|gb|EFD60938.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis EAS054] Length=265 Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 213/213 (100%), Positives = 213/213 (100%), Gaps = 0/213 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 >gi|289744593|ref|ZP_06503971.1| predicted protein [Mycobacterium tuberculosis 02_1987] gi|289685121|gb|EFD52609.1| predicted protein [Mycobacterium tuberculosis 02_1987] Length=259 Score = 320 bits (820), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 212/213 (99%), Positives = 213/213 (100%), Gaps = 0/213 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARC+SGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCKSGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLGE 213 >gi|306782094|ref|ZP_07420431.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis SUMu002] gi|308325210|gb|EFP14061.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis SUMu002] Length=182 Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 182/182 (100%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DP 182 DP Sbjct 181 DP 182 Score = 40.4 bits (93), Expect = 0.57, Method: Compositional matrix adjust. Identities = 36/101 (36%), Positives = 44/101 (44%), Gaps = 33/101 (32%) Query 155 DPAPPVELAANDLPAPLGEPLPAAPADPAPPA---DLAPPAPADVAP------------- 198 + AP +LA+ + +GE + A A P L+ P +V P Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAA 141 Query 199 -----------------PVELAVNDLPAPLGEPLPAAPADP 222 PVELA NDLPAPLGEPLPAAPADP Sbjct 142 VNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPADP 182 Score = 40.0 bits (92), Expect = 0.68, Method: Compositional matrix adjust. Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 17/100 (17%) Query 195 DVAPPVELAVNDLPAPLGEPLPAAPADPAPPA---DLAPPAPADLAPPAPADLAPPAPAD 251 + AP +LA + +GE + A A P L+ P ++ P + A AP A Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAA 141 Query 252 L--------------APPVELAVNDLPAPLGEPLPAAPAE 277 + APPVELA NDLPAPLGEPLPAAPA+ Sbjct 142 VNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPAD 181 >gi|306774991|ref|ZP_07413328.1| hypothetical protein TMAG_00803 [Mycobacterium tuberculosis SUMu001] gi|308216486|gb|EFO75885.1| hypothetical protein TMAG_00803 [Mycobacterium tuberculosis SUMu001] Length=351 Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 212/212 (100%), Positives = 212/212 (100%), Gaps = 0/212 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLG 212 DPAPPADLAPPAPADVAPPVELAVNDLPAPLG Sbjct 181 DPAPPADLAPPAPADVAPPVELAVNDLPAPLG 212 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 201/286 (71%), Positives = 210/286 (74%), Gaps = 49/286 (17%) Query 155 DPAPPVELAANDLPAPLGEPLPAAPADPAPPA---DLAPPAPADVAP------------- 198 + AP +LA+ + +GE + A A P L+ P +V P Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAA 141 Query 199 -----------------PVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPAP 241 PVELA NDLPAPLGEPLPAAPA P P Sbjct 142 VNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA----------------DPAPP 185 Query 242 ADLAPPAPADLAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAP 301 ADLAPPAPAD+APPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAP Sbjct 186 ADLAPPAPADVAPPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPPAPADLAP 245 Query 302 PAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPG 361 PAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPG Sbjct 246 PAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPG 305 Query 362 DVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 DVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 306 DVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 351 >gi|306783535|ref|ZP_07421857.1| hypothetical protein TMCG_03124 [Mycobacterium tuberculosis SUMu003] gi|308331696|gb|EFP20547.1| hypothetical protein TMCG_03124 [Mycobacterium tuberculosis SUMu003] Length=287 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 181/181 (100%), Positives = 181/181 (100%), Gaps = 0/181 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 Query 181 D 181 D Sbjct 181 D 181 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 141/233 (61%), Positives = 150/233 (65%), Gaps = 47/233 (20%) Query 195 DVAPPVELAVNDLPAPLGEPLPAAPADPAPPA---DLAPPAPADLAPPAPADLAPPAPAD 251 + AP +LA + +GE + A A P L+ P ++ P A A AP D Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLP---ASAAMDAPLD 138 Query 252 LA-----------------PPVELAVNDLPAPLGEPLPAAPAELAPPADLAPASADLAPP 294 A PPVELA NDLPAPLGEPLPAAPA+ Sbjct 139 AAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPAD----------------- 181 Query 295 APADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP 354 LAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP Sbjct 182 -------GTTRRLAPPAPADLAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQP 234 Query 355 ADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 ADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 235 ADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 287 >gi|307083387|ref|ZP_07492500.1| hypothetical protein TMLG_01564 [Mycobacterium tuberculosis SUMu012] gi|308366915|gb|EFP55766.1| hypothetical protein TMLG_01564 [Mycobacterium tuberculosis SUMu012] Length=184 Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 181/184 (99%), Positives = 182/184 (99%), Gaps = 0/184 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPLPAAPA 180 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELA NDLPAPLGEPLPAAPA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAVNDLPAPLGEPLPAAPA 180 Query 181 DPAP 184 + AP Sbjct 181 ELAP 184 Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust. Identities = 44/103 (43%), Positives = 54/103 (53%), Gaps = 17/103 (16%) Query 195 DVAPPVELAVNDLPAPLGEPLPAAPADPAPPA---DLAPPAPADLAPPAPADLAPPAPAD 251 + AP +LA + +GE + A A P L+ P ++ P + A AP A Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAA 141 Query 252 L--------------APPVELAVNDLPAPLGEPLPAAPAELAP 280 + APPVELAVNDLPAPLGEPLPAAPAELAP Sbjct 142 VNGEPAPLAPPPADPAPPVELAVNDLPAPLGEPLPAAPAELAP 184 Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust. Identities = 37/103 (36%), Positives = 46/103 (45%), Gaps = 33/103 (32%) Query 155 DPAPPVELAANDLPAPLGEPLPAAPADPAPPA---DLAPPAPADVAP------------- 198 + AP +LA+ + +GE + A A P L+ P +V P Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAA 141 Query 199 -----------------PVELAVNDLPAPLGEPLPAAPADPAP 224 PVELAVNDLPAPLGEPLPAAPA+ AP Sbjct 142 VNGEPAPLAPPPADPAPPVELAVNDLPAPLGEPLPAAPAELAP 184 >gi|306802526|ref|ZP_07439194.1| hypothetical protein TMHG_00037 [Mycobacterium tuberculosis SUMu008] gi|308350738|gb|EFP39589.1| hypothetical protein TMHG_00037 [Mycobacterium tuberculosis SUMu008] Length=153 Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust. Identities = 153/153 (100%), Positives = 153/153 (100%), Gaps = 0/153 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPP 153 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPP Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPP 153 >gi|307078827|ref|ZP_07487997.1| hypothetical protein TMKG_03580 [Mycobacterium tuberculosis SUMu011] gi|308363258|gb|EFP52109.1| hypothetical protein TMKG_03580 [Mycobacterium tuberculosis SUMu011] Length=186 Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 175/175 (100%), Positives = 175/175 (100%), Gaps = 0/175 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPL 175 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPL Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGEPL 175 >gi|323720690|gb|EGB29767.1| resuscitation-promoting factor RpfA [Mycobacterium tuberculosis CDC1551A] Length=204 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 >gi|306796639|ref|ZP_07434941.1| hypothetical protein TMFG_02677 [Mycobacterium tuberculosis SUMu006] gi|308342936|gb|EFP31787.1| hypothetical protein TMFG_02677 [Mycobacterium tuberculosis SUMu006] Length=213 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 >gi|306971099|ref|ZP_07483760.1| hypothetical protein TMJG_02533 [Mycobacterium tuberculosis SUMu010] gi|308359351|gb|EFP48202.1| hypothetical protein TMJG_02533 [Mycobacterium tuberculosis SUMu010] Length=200 Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 173/173 (100%), Positives = 173/173 (100%), Gaps = 0/173 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLGE 173 >gi|31792055|ref|NP_854548.1| resuscitation-promoting factor RpfA [Mycobacterium bovis AF2122/97] gi|31617642|emb|CAD93752.1| POSSIBLE RESUSCITATION-PROMOTING FACTOR RPFA [Mycobacterium bovis AF2122/97] Length=327 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 164/188 (88%), Positives = 164/188 (88%), Gaps = 16/188 (8%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGE----------------PAPLAPPPADPAPPVELAA 164 ATPREVLPASAAMDAPLDAAAVNGE P PAD APPVELA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADLAPPAPADLAPPAPADLAPPVELAV 180 Query 165 NDLPAPLG 172 NDLPAPLG Sbjct 181 NDLPAPLG 188 Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 195/256 (77%), Positives = 205/256 (81%), Gaps = 13/256 (5%) Query 155 DPAPPVELAANDLPAPLGEPLPAAPADPAPPA---DLAPPAPADVAPPVELAVNDLPAPL 211 + AP +LA+ + +GE + A A P L+ P +V P A + Sbjct 82 EFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPA--------SAAM 133 Query 212 GEPLPAAPADPAPPADLAPPAPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL 271 PL AA + P P PADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL Sbjct 134 DAPLDAAAVNGEPAP--LAPPPADLAPPAPADLAPPAPADLAPPVELAVNDLPAPLGEPL 191 Query 272 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP 331 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP Sbjct 192 PAAPAELAPPADLAPASADLAPPAPADLAPPAPAELAPPAPADLAPPAAVNEQTAPGDQP 251 Query 332 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV 391 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV Sbjct 252 ATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDV 311 Query 392 CGNDALDSLAQPYVIG 407 CGNDALDSLAQPYVIG Sbjct 312 CGNDALDSLAQPYVIG 327 >gi|306806708|ref|ZP_07443376.1| hypothetical protein TMGG_02932 [Mycobacterium tuberculosis SUMu007] gi|308346821|gb|EFP35672.1| hypothetical protein TMGG_02932 [Mycobacterium tuberculosis SUMu007] Length=163 Score = 289 bits (740), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 163/163 (100%), Positives = 163/163 (100%), Gaps = 0/163 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELA 163 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELA Sbjct 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELA 163 >gi|183984632|ref|YP_001852923.1| resuscitation-promoting factor RpfA [Mycobacterium marinum M] gi|183177958|gb|ACC43068.1| resuscitation-promoting factor RpfA [Mycobacterium marinum M] Length=385 Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 186/283 (66%), Positives = 199/283 (71%), Gaps = 60/283 (21%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIA+A A AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIALAGHAAAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF QSTWA+HGGGE+APSAQLASRE+QIAV ERVLATQGRGAWPVCG GLS Sbjct 61 GNGYYGGVQFAQSTWASHGGGEYAPSAQLASREEQIAVAERVLATQGRGAWPVCGHGLSA 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPL-------APPPADPAPPVELAANDL------ 167 ATPR+V PA AA+DAPLDA +NGEPAPL PPPADPAPPVELAAND+ Sbjct 121 ATPRDV-PAPAALDAPLDAPGINGEPAPLAPPPGDDVPPPADPAPPVELAANDVPAPADL 179 Query 168 --------PAP-------------LGEPLPAAPAD-PAPPADLAPPAPA-------DVAP 198 PAP E LP AP D P P D+A PAPA DVAP Sbjct 180 PPAPEDLPPAPEDLAPPAPADLPPAPEDLPPAPQDLPPAPEDVAAPAPADLPPAPEDVAP 239 Query 199 PVELAVNDLPAPLGEPLPAAPADPAPPADLAPPAPADLAPPAP 241 PVEL ND+PAP+ DL PPAP DL PPAP Sbjct 240 PVELVGNDVPAPV---------------DL-PPAPEDL-PPAP 265 >gi|240171976|ref|ZP_04750635.1| resuscitation-promoting factor RpfA [Mycobacterium kansasii ATCC 12478] Length=208 Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 140/178 (79%), Positives = 151/178 (85%), Gaps = 9/178 (5%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTS+VSVAK+AFTGAVLGGGGIAMA A AATD EWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPTTSSVSVAKVAFTGAVLGGGGIAMAGHAAAATDWEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QFT TWA+HGGGEFAPSAQLA+REQQIAV ERVLATQGRGAWPVCG GLS+ Sbjct 61 GNGYYGGVQFTPGTWASHGGGEFAPSAQLATREQQIAVAERVLATQGRGAWPVCGHGLSS 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPLAP--------PPADPAPPVELAANDLPAP 170 AT R+V PA AAMDAP+DA VNGEPAPLA PADPAP V+ A N+LPAP Sbjct 121 ATLRDV-PAPAAMDAPVDAPDVNGEPAPLADAPPPADVAQPADPAPQVQFAGNELPAP 177 >gi|118616157|ref|YP_904489.1| resuscitation-promoting factor RpfA [Mycobacterium ulcerans Agy99] gi|118568267|gb|ABL03018.1| resuscitation-promoting factor RpfA [Mycobacterium ulcerans Agy99] Length=287 Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 143/174 (83%), Positives = 153/174 (88%), Gaps = 8/174 (4%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIA+A A AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIALAGHAAAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF QSTWA+HGGGE+APSAQLASRE+QIAV ERVLATQGRGAWPVCG GLS Sbjct 61 GNGYYGGVQFAQSTWASHGGGEYAPSAQLASREEQIAVAERVLATQGRGAWPVCGHGLSA 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPL-------APPPADPAPPVELAANDL 167 ATPR+V P AA+DAPLDA +NGEPAPL PPPADPAPPVELAAND+ Sbjct 121 ATPRDV-PPPAALDAPLDAPGINGEPAPLAPPPGDDVPPPADPAPPVELAANDV 173 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/51 (59%), Positives = 34/51 (67%), Gaps = 7/51 (13%) Query 356 DAPPPGDVTEAPAETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQPYVI 406 D PP DV EA S +AYTKKLWQAI Q++ GNDALD+LAQP V Sbjct 243 DLAPPVDVHEA-------STVAYTKKLWQAIVGQNISGNDALDALAQPAVF 286 >gi|296169633|ref|ZP_06851251.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895630|gb|EFG75326.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=153 Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 114/145 (79%), Positives = 129/145 (89%), Gaps = 1/145 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKP+TSN+SVAKIA TGAVLGGG IA+A QA AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPSTSNISVAKIAVTGAVLGGGSIALAGQAAAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF+ STWA+HGGG++APSA+LA++EQQIAV ERVLATQGRGAWPVCG LS Sbjct 61 GNGYHGGVQFSASTWASHGGGQYAPSAELATKEQQIAVAERVLATQGRGAWPVCGGPLSG 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGE 145 TPREV PA A +DAPLDA +NG+ Sbjct 121 PTPREV-PAPAGLDAPLDAPGINGQ 144 >gi|342860480|ref|ZP_08717131.1| hypothetical protein MCOL_16436 [Mycobacterium colombiense CECT 3035] gi|342132135|gb|EGT85376.1| hypothetical protein MCOL_16436 [Mycobacterium colombiense CECT 3035] Length=267 Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 108/136 (80%), Positives = 123/136 (91%), Gaps = 1/136 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKP++SN+SVAKIAFTGAVLGGG IA+A QA AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPSSSNISVAKIAFTGAVLGGGSIALAGQAAAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF+ STWA+HGGG++APSA+LA++EQQIAV ERVLATQGRGAWPVCG LS Sbjct 61 GNGYHGGVQFSSSTWASHGGGQYAPSAELATKEQQIAVAERVLATQGRGAWPVCGGPLSG 120 Query 121 ATPREVLPASAAMDAP 136 T R+ LPA AA+DAP Sbjct 121 PTQRD-LPAPAALDAP 135 Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 26/38 (69%), Positives = 29/38 (77%), Gaps = 1/38 (2%) Query 367 PAETPQ-VSNIAYTKKLWQAIRAQDVCGNDALDSLAQP 403 PA PQ S YT++LW AIRAQDV GNDALD+LAQP Sbjct 226 PAGMPQHASEAGYTQQLWDAIRAQDVQGNDALDALAQP 263 >gi|126437427|ref|YP_001073118.1| transglycosylase domain-containing protein [Mycobacterium sp. JLS] gi|126237227|gb|ABO00628.1| Transglycosylase domain protein [Mycobacterium sp. JLS] Length=431 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/144 (71%), Positives = 116/144 (81%), Gaps = 6/144 (4%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPT S VSVAKIAFTGAV+GGG IA+A A AATD EWDQVA CES GNW+INT Sbjct 1 MSGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STWA HGGGEFAP+A +A++E+QIAV ERVLA+QG+GAWP CG LS Sbjct 61 GNGYHGGLQFSPSTWAGHGGGEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSG 120 Query 121 ATPREVLPASAAMDAPLDAAAVNG 144 ATPR V+ D P+D A +NG Sbjct 121 ATPRNVV------DQPIDPAPLNG 138 >gi|108801442|ref|YP_641639.1| transglycosylase-like protein [Mycobacterium sp. MCS] gi|119870595|ref|YP_940547.1| transglycosylase domain-containing protein [Mycobacterium sp. KMS] gi|108771861|gb|ABG10583.1| Transglycosylase-like protein [Mycobacterium sp. MCS] gi|119696684|gb|ABL93757.1| Transglycosylase domain protein [Mycobacterium sp. KMS] Length=433 Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/144 (71%), Positives = 116/144 (81%), Gaps = 6/144 (4%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPT S VSVAKIAFTGAV+GGG IA+A A AATD EWDQVA CES GNW+INT Sbjct 1 MSGRHRKPTNSTVSVAKIAFTGAVIGGGSIALAGHAGAATDSEWDQVAACESSGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STWA HGGGEFAP+A +A++E+QIAV ERVLA+QG+GAWP CG LS Sbjct 61 GNGYHGGLQFSPSTWAGHGGGEFAPAAYMATKEEQIAVAERVLASQGKGAWPSCGGPLSG 120 Query 121 ATPREVLPASAAMDAPLDAAAVNG 144 ATPR V+ D P+D A +NG Sbjct 121 ATPRNVV------DQPIDPAPLNG 138 >gi|254823207|ref|ZP_05228208.1| hypothetical protein MintA_24979 [Mycobacterium intracellulare ATCC 13950] Length=126 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 101/126 (81%), Positives = 115/126 (92%), Gaps = 0/126 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPT S+V+VAKIAFTGAVLGGG IA+A QA AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPTASSVNVAKIAFTGAVLGGGSIALAGQAAAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF+ STW++HGGG++APSA+LA++EQQIAV ERVLATQGRGAWPVCG LS Sbjct 61 GNGYHGGVQFSASTWSSHGGGQYAPSAELATKEQQIAVAERVLATQGRGAWPVCGGPLSG 120 Query 121 ATPREV 126 +PREV Sbjct 121 PSPREV 126 >gi|15828154|ref|NP_302417.1| hypothetical protein ML2151 [Mycobacterium leprae TN] gi|221230631|ref|YP_002504047.1| hypothetical protein MLBr_02151 [Mycobacterium leprae Br4923] gi|2440090|emb|CAB16645.1| hypothetical protein MLCB57.05c [Mycobacterium leprae] gi|13093708|emb|CAC31106.1| conserved hypothetical protein [Mycobacterium leprae] gi|219933738|emb|CAR72248.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=174 Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 103/144 (72%), Positives = 116/144 (81%), Gaps = 7/144 (4%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MS +RK TTS++ VAKI FTGA+L G IA+A QA+ ATD EWDQVARCESGGNWSINT Sbjct 1 MSESYRKLTTSSIIVAKITFTGAML-DGSIALAGQASPATDSEWDQVARCESGGNWSINT 59 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGYLGGLQF+Q TWA+HGGGE+APSAQLA+REQQIAV ERVLATQG GAWP CG GLS Sbjct 60 GNGYLGGLQFSQGTWASHGGGEYAPSAQLATREQQIAVAERVLATQGSGAWPACGHGLSG 119 Query 121 ATPREVLPASAAMDAPLDAAAVNG 144 + +EVLP A M AP +NG Sbjct 120 PSLQEVLP--AGMGAPW----ING 137 >gi|41406903|ref|NP_959739.1| hypothetical protein MAP0805c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395253|gb|AAS03122.1| hypothetical protein MAP_0805c [Mycobacterium avium subsp. paratuberculosis K-10] Length=250 Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 116/144 (81%), Positives = 124/144 (87%), Gaps = 5/144 (3%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTS+VSVAKIA TGAVLGGG IAMA QA AATDGEWDQVARCESGGNW INT Sbjct 1 MSGRHRKPTTSSVSVAKIAVTGAVLGGGAIAMAGQAAAATDGEWDQVARCESGGNWGINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GG+QF+ STWAAHGGGE+APSA+LA+REQQIAV ERVLATQGRGAWPVCG LS Sbjct 61 GNGYHGGVQFSASTWAAHGGGEYAPSAELATREQQIAVAERVLATQGRGAWPVCGGPLSG 120 Query 121 ATPREVLPASAAMDAPLDAAAVNG 144 TPR+V PA A +DAP VNG Sbjct 121 PTPRDV-PAPAGLDAP----GVNG 139 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/32 (69%), Positives = 26/32 (82%), Gaps = 0/32 (0%) Query 372 QVSNIAYTKKLWQAIRAQDVCGNDALDSLAQP 403 VS YT++LW+AIRAQDV GNDALD+L QP Sbjct 215 HVSEAGYTQRLWEAIRAQDVQGNDALDALVQP 246 >gi|298524360|ref|ZP_07011769.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] gi|298494154|gb|EFI29448.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A] Length=99 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 92/92 (100%), Positives = 92/92 (100%), Gaps = 0/92 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT Sbjct 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASR 92 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASR Sbjct 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASR 92 >gi|118472292|ref|YP_889933.1| hypothetical protein MSMEG_5700 [Mycobacterium smegmatis str. MC2 155] gi|118173579|gb|ABK74475.1| secreted protein [Mycobacterium smegmatis str. MC2 155] Length=486 Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 120/174 (69%), Positives = 138/174 (80%), Gaps = 12/174 (6%) Query 1 MSGRHRKPTTSN--VSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSI 58 MSGRHRKPT+S+ +VAKIAFTGAVLGGGG+ MA QA AATDGEWDQVARCESGGNW+I Sbjct 1 MSGRHRKPTSSSSAKNVAKIAFTGAVLGGGGLGMAGQAMAATDGEWDQVARCESGGNWAI 60 Query 59 NTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGL 118 NTGNGY GGLQF+ STW AHGG EFAP+A +A++E+QIAV ERVLA+QG+GAWP CGRGL Sbjct 61 NTGNGYHGGLQFSPSTWRAHGGTEFAPAAYMATKEEQIAVAERVLASQGKGAWPTCGRGL 120 Query 119 SNATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLPAPLG 172 S ATPR V+ + APLDA VNGE PPPA PV++ A +PAP G Sbjct 121 SGATPRNVV--AEPEPAPLDAPGVNGE----LPPPA----PVDMLAAPMPAPEG 164 >gi|333989435|ref|YP_004522049.1| resuscitation-promoting factor RpfA [Mycobacterium sp. JDM601] gi|333485403|gb|AEF34795.1| resuscitation-promoting factor RpfA [Mycobacterium sp. JDM601] Length=326 Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 102/149 (69%), Positives = 119/149 (80%), Gaps = 2/149 (1%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPT SNV++AKIAFTGAV+GGG +A+A A ATD EWD+VARCESG NW INT Sbjct 1 MSGRHRKPTQSNVNIAKIAFTGAVIGGGSLALAGHAAGATDDEWDRVARCESGNNWGINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STW+++GGG++AP A ASREQQIA+ E VLATQGRGAWPVCGRGLS Sbjct 61 GNGYHGGLQFSPSTWSSNGGGKYAPVAHQASREQQIAIAENVLATQGRGAWPVCGRGLSG 120 Query 121 ATPREVLPASAAMDAPLDAAAVNGEPAPL 149 +PR+V A A DAP+D NGE + Sbjct 121 PSPRDVPTAPA--DAPVDHPDANGETVAM 147 Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust. Identities = 16/34 (48%), Positives = 25/34 (74%), Gaps = 0/34 (0%) Query 369 ETPQVSNIAYTKKLWQAIRAQDVCGNDALDSLAQ 402 + Q ++ + ++LWQAIRA++V GNDAL + AQ Sbjct 286 DKQQAVSVGFHQQLWQAIRAENVSGNDALAAFAQ 319 >gi|120405998|ref|YP_955827.1| FHA domain-containing protein [Mycobacterium vanbaalenii PYR-1] gi|119958816|gb|ABM15821.1| FHA domain containing protein [Mycobacterium vanbaalenii PYR-1] Length=444 Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/144 (71%), Positives = 119/144 (83%), Gaps = 3/144 (2%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKP S V+VAKIAFTGAV+GGGG+A+A QA AATDGEWDQVARCESGGNW+INT Sbjct 1 MSGRHRKPAPSAVNVAKIAFTGAVIGGGGLALAGQAGAATDGEWDQVARCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ TW+ HGGGE+AP+A LA++E+QIAV ERVLA+QG+GAWP CG LS Sbjct 61 GNGYHGGLQFSPGTWSGHGGGEYAPAAYLATKEEQIAVAERVLASQGKGAWPSCGGPLSA 120 Query 121 ATPREVLPASAAMDAPLDAAAVNG 144 ATPR V+ A AP+D +NG Sbjct 121 ATPRNVV---AEPPAPVDPVGLNG 141 >gi|296395237|ref|YP_003660121.1| transglycosylase [Segniliparus rotundus DSM 44985] gi|296182384|gb|ADG99290.1| Transglycosylase domain protein [Segniliparus rotundus DSM 44985] Length=261 Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 109/220 (50%), Positives = 130/220 (60%), Gaps = 29/220 (13%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRK + + K A +G L G G+ A+ A AATD +WD+VA CESG NW INT Sbjct 1 MSGRHRKQSDTGSIAGKAALSGIALTGAGMWFASSADAATDDQWDRVASCESGNNWHINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ TW AHGGG++AP+A LA+REQQIA+ E VLATQGRGAWPVCGRGL + Sbjct 61 GNGYQGGLQFSSGTWLAHGGGKYAPAANLATREQQIAIAEHVLATQGRGAWPVCGRGLGS 120 Query 121 ATPRE-----------VLPASAAMDAPLD------AAAVNGEPAPLAPPPADPAPPVELA 163 AT RE V A D D A A +G A A + AP +E++ Sbjct 121 ATFREAPVPNKSQPDAVAVADVEKDGISDHVAPALAKATSG--AIQAAGFVEIAPELEIS 178 Query 164 -ANDLPAPLGEPLPA---------APADPAPPADLAPPAP 193 ANDL AP + PA AP AP AD+ AP Sbjct 179 QANDLRAPAPDTDPADEPDAPEQEAPEQEAPVADIDADAP 218 >gi|145222295|ref|YP_001132973.1| transglycosylase domain-containing protein [Mycobacterium gilvum PYR-GCK] gi|145214781|gb|ABP44185.1| Transglycosylase domain protein [Mycobacterium gilvum PYR-GCK] Length=466 Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/127 (76%), Positives = 111/127 (88%), Gaps = 0/127 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKP +S SVAKIAFTGAV+GGGGIA+A A AATDGEWD+VA CESGGNW+INT Sbjct 1 MSGRHRKPASSAKSVAKIAFTGAVIGGGGIALAGHAGAATDGEWDRVASCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STW+ HGGGEFAP+A LA++E+QIAV ERVLA+QG+GAWP CG+ LS Sbjct 61 GNGYHGGLQFSPSTWSGHGGGEFAPAAYLATKEEQIAVAERVLASQGKGAWPTCGKVLSA 120 Query 121 ATPREVL 127 ATPR V+ Sbjct 121 ATPRNVV 127 >gi|323720731|gb|EGB29807.1| resuscitation-promoting factor rpfA [Mycobacterium tuberculosis CDC1551A] Length=93 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 92/93 (99%), Positives = 93/93 (100%), Gaps = 0/93 (0%) Query 315 LAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVS 374 +APPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVS Sbjct 1 MAPPAAVNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVS 60 Query 375 NIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 407 NIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 61 NIAYTKKLWQAIRAQDVCGNDALDSLAQPYVIG 93 >gi|315442729|ref|YP_004075608.1| transglycosylase-like protein [Mycobacterium sp. Spyr1] gi|315261032|gb|ADT97773.1| transglycosylase-like protein [Mycobacterium sp. Spyr1] Length=466 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 96/127 (76%), Positives = 111/127 (88%), Gaps = 0/127 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKP +S SVAKIAFTGAV+GGGGIA+A A AATDGEWD+VA CESGGNW+INT Sbjct 1 MSGRHRKPASSAKSVAKIAFTGAVIGGGGIALAGHAGAATDGEWDRVASCESGGNWAINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STW+ HGGGEFAP+A LA++E+QIAV ERVLA+QG+GAWP CG+ LS Sbjct 61 GNGYHGGLQFSPSTWSGHGGGEFAPAAYLATKEEQIAVAERVLASQGKGAWPTCGKVLSA 120 Query 121 ATPREVL 127 ATPR V+ Sbjct 121 ATPRNVV 127 >gi|317509218|ref|ZP_07966839.1| transglycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316252428|gb|EFV11877.1| transglycosylase domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length=271 Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 82/125 (66%), Positives = 96/125 (77%), Gaps = 0/125 (0%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHR+ + + K A +G L G G+ A+ A AATD +WD+VA CESG NW INT Sbjct 1 MSGRHRQQSETGSIAGKAALSGLALTGAGMWFASAAEAATDDQWDRVAACESGNNWHINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLSN 120 GNGY GGLQF+ STW+AHGGG++AP+A LA+REQQIAV E VLATQGRGAWPVCGRGL Sbjct 61 GNGYQGGLQFSPSTWSAHGGGKYAPAANLATREQQIAVAEHVLATQGRGAWPVCGRGLGA 120 Query 121 ATPRE 125 AT RE Sbjct 121 ATLRE 125 >gi|326384177|ref|ZP_08205859.1| transglycosylase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] gi|326197042|gb|EGD54234.1| transglycosylase domain-containing protein [Gordonia neofelifaecis NRRL B-59395] Length=210 Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 107/205 (53%), Positives = 124/205 (61%), Gaps = 26/205 (12%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQA-TAATDGEWDQVARCESGGNWSIN 59 MSGRH K TT+ + AKIA T A++GGG M A +AATD EWDQVA+CESGGNW+IN Sbjct 1 MSGRHAKQTTNTKTFAKIALTSAIIGGGAALMGAGHASAATDSEWDQVAQCESGGNWAIN 60 Query 60 TGNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGRGLS 119 TGNGY GGLQF+ STWAAHGG ++APSA A+REQQIAVGERVLATQG+GAWP CG LS Sbjct 61 TGNGYQGGLQFSPSTWAAHGGTQYAPSADQATREQQIAVGERVLATQGKGAWPTCGGPLS 120 Query 120 NATPREVLPASAAMDAPLDAAAVNGEPAPLAPPPADPAPPVELAANDLP-APLGEPLPAA 178 AT R AP P PA+P P A D P + LG+ A Sbjct 121 GATQR---------------------TAPSTPKPANPIAP---KAQDAPKSELGKTADAK 156 Query 179 PADPAPPADLAPPAPADVAPPVELA 203 D A + V+P V A Sbjct 157 STDEAKQQVDEAVNSSKVSPEVRSA 181 >gi|336461253|gb|EGO40128.1| transglycosylase-like protein [Mycobacterium avium subsp. paratuberculosis S397] Length=226 Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 88/113 (78%), Positives = 95/113 (85%), Gaps = 5/113 (4%) Query 32 MAAQATAATDGEWDQVARCESGGNWSINTGNGYLGGLQFTQSTWAAHGGGEFAPSAQLAS 91 MA QA AATDGEWDQVARCESGGNW INTGNGY GG+QF+ STWAAHGGGE+APSA+LA+ Sbjct 1 MAGQAAAATDGEWDQVARCESGGNWGINTGNGYHGGVQFSASTWAAHGGGEYAPSAELAT 60 Query 92 REQQIAVGERVLATQGRGAWPVCGRGLSNATPREVLPASAAMDAPLDAAAVNG 144 REQQIAV ERVLATQGRGAWPVCG LS TPR+V PA A +DAP VNG Sbjct 61 REQQIAVAERVLATQGRGAWPVCGGPLSGPTPRDV-PAPAGLDAP----GVNG 108 Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 22/32 (69%), Positives = 26/32 (82%), Gaps = 0/32 (0%) Query 372 QVSNIAYTKKLWQAIRAQDVCGNDALDSLAQP 403 VS YT++LW+AIRAQDV GNDALD+L QP Sbjct 191 HVSEAGYTQRLWEAIRAQDVQGNDALDALVQP 222 >gi|308378744|ref|ZP_07483759.2| hypothetical protein TMJG_02532 [Mycobacterium tuberculosis SUMu010] gi|308359385|gb|EFP48236.1| hypothetical protein TMJG_02532 [Mycobacterium tuberculosis SUMu010] Length=87 Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 86/87 (99%), Positives = 87/87 (100%), Gaps = 0/87 (0%) Query 321 VNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTK 380 +NEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTK Sbjct 1 MNEQTAPGDQPATAPGGPVGLATDLELPEPDPQPADAPPPGDVTEAPAETPQVSNIAYTK 60 Query 381 KLWQAIRAQDVCGNDALDSLAQPYVIG 407 KLWQAIRAQDVCGNDALDSLAQPYVIG Sbjct 61 KLWQAIRAQDVCGNDALDSLAQPYVIG 87 >gi|312138406|ref|YP_004005742.1| resuscitation-promoting factor rpfa [Rhodococcus equi 103S] gi|325674595|ref|ZP_08154282.1| resuscitation-promoting factor [Rhodococcus equi ATCC 33707] gi|311887745|emb|CBH47057.1| putative resuscitation-promoting factor rpfA [Rhodococcus equi 103S] gi|325554181|gb|EGD23856.1| resuscitation-promoting factor [Rhodococcus equi ATCC 33707] Length=210 Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 79/123 (65%), Positives = 96/123 (79%), Gaps = 2/123 (1%) Query 1 MSGRHRKPTTSNVSVAKIAFTGAVLGGGGIAMAAQATAATDGEWDQVARCESGGNWSINT 60 MSGRHRKPTT+ +VAK+A TGA++G GG+A A A AA D +WD++A+CE+ GNW INT Sbjct 1 MSGRHRKPTTTGRTVAKVAVTGAIMGVGGVAFAGTANAAPDSDWDRLAQCEASGNWGINT 60 Query 61 GNGYLGGLQFTQSTWAAHGGGEFAPSAQLASREQQIAVGERVLATQGRGAWPVCGR--GL 118 GNGY GGLQF+ STW HGGG+FA +A A+REQQI V ERVLA+QG GAWP C GL Sbjct 61 GNGYQGGLQFSPSTWTGHGGGQFAATADKATREQQIVVAERVLASQGWGAWPSCSSKLGL 120 Query 119 SNA 121 S+A Sbjct 121 SSA 123 Lambda K H 0.310 0.131 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 810175551480 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40