BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0868c
Length=92
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608008|ref|NP_215383.1| molybdenum cofactor biosynthesis pr... 174 3e-42
gi|340625882|ref|YP_004744334.1| putative molybdenum cofactor bi... 152 1e-35
gi|289749388|ref|ZP_06508766.1| molybdenum cofactor biosynthesis... 133 1e-29
gi|183984631|ref|YP_001852922.1| molybdenum cofactor biosynthesi... 114 5e-24
gi|240171975|ref|ZP_04750634.1| molybdenum cofactor biosynthesis... 114 6e-24
gi|296169634|ref|ZP_06851252.1| molybdenum cofactor biosynthesis... 106 1e-21
gi|342860481|ref|ZP_08717132.1| ThiS family protein [Mycobacteri... 104 5e-21
gi|333989436|ref|YP_004522050.1| molybdenum cofactor biosynthesi... 102 2e-20
gi|254823206|ref|ZP_05228207.1| ThiS family protein [Mycobacteri... 100 6e-20
gi|254773882|ref|ZP_05215398.1| ThiS family protein [Mycobacteri... 99.4 2e-19
gi|118466373|ref|YP_880257.1| ThiS family protein [Mycobacterium... 99.4 2e-19
gi|118616156|ref|YP_904488.1| molybdenum cofactor biosynthesis p... 99.0 2e-19
gi|336461252|gb|EGO40127.1| molybdopterin converting factor, sma... 97.4 6e-19
gi|120405997|ref|YP_955826.1| hypothetical protein Mvan_5048 [My... 96.7 1e-18
gi|41406904|ref|NP_959740.1| MoaD2 [Mycobacterium avium subsp. p... 94.7 3e-18
gi|108801441|ref|YP_641638.1| sulfur transfer protein ThiS [Myco... 85.5 3e-15
gi|333918504|ref|YP_004492085.1| sulfur transfer protein ThiS [A... 83.6 9e-15
gi|315442730|ref|YP_004075609.1| molybdopterin converting factor... 82.0 3e-14
gi|145222296|ref|YP_001132974.1| sulfur transfer protein ThiS [M... 81.6 4e-14
gi|118472944|ref|YP_889932.1| ThiS family protein [Mycobacterium... 79.0 2e-13
gi|256374623|ref|YP_003098283.1| sulfur carrier protein ThiS [Ac... 77.8 5e-13
gi|302530571|ref|ZP_07282913.1| molybdopterin converting factor,... 75.9 2e-12
gi|25169121|emb|CAD47957.1| putative molybdopterin cofactor synt... 73.6 9e-12
gi|325000988|ref|ZP_08122100.1| putative molybdenum cofactor bio... 72.0 3e-11
gi|343523629|ref|ZP_08760590.1| ThiS family protein [Actinomyces... 71.6 4e-11
gi|326771999|ref|ZP_08231284.1| molybdopterin cofactor synthesis... 71.2 4e-11
gi|284993308|ref|YP_003411863.1| sulfur transfer protein ThiS [G... 70.9 6e-11
gi|330470777|ref|YP_004408520.1| molybdenum cofactor biosynthesi... 69.7 1e-10
gi|169627969|ref|YP_001701618.1| putative molybdenum cofactor bi... 69.7 2e-10
gi|296395236|ref|YP_003660120.1| thiamineS protein [Segniliparus... 69.3 2e-10
gi|296129600|ref|YP_003636850.1| thiamineS protein [Cellulomonas... 68.2 4e-10
gi|257057376|ref|YP_003135208.1| molybdopterin converting factor... 67.8 5e-10
gi|262201213|ref|YP_003272421.1| thiamine S protein [Gordonia br... 67.8 5e-10
gi|295394944|ref|ZP_06805157.1| molybdenum cofactor biosynthesis... 64.7 4e-09
gi|331699403|ref|YP_004335642.1| thiamineS protein [Pseudonocard... 64.3 5e-09
gi|117929231|ref|YP_873782.1| sulfur transfer protein ThiS [Acid... 63.9 7e-09
gi|260904728|ref|ZP_05913050.1| ThiS family protein [Brevibacter... 63.5 9e-09
gi|325962826|ref|YP_004240732.1| molybdopterin converting factor... 63.5 9e-09
gi|220912212|ref|YP_002487521.1| sulfur carrier protein ThiS [Ar... 63.2 1e-08
gi|320533679|ref|ZP_08034300.1| ThiS family protein [Actinomyces... 62.8 2e-08
gi|317509217|ref|ZP_07966838.1| ThiS family protein [Segniliparu... 61.6 3e-08
gi|296138554|ref|YP_003645797.1| sulfur carrier protein ThiS [Ts... 61.6 4e-08
gi|148273531|ref|YP_001223092.1| putative molybdopterin converti... 61.6 4e-08
gi|300790324|ref|YP_003770615.1| ThiS/MoaD family protein [Amyco... 60.8 6e-08
gi|302870674|ref|YP_003839311.1| sulfur transfer protein ThiS [M... 60.1 1e-07
gi|329945323|ref|ZP_08293114.1| ThiS family protein [Actinomyces... 60.1 1e-07
gi|170782850|ref|YP_001711184.1| putative molybdopterin converti... 58.5 3e-07
gi|336179909|ref|YP_004585284.1| sulfur transfer protein ThiS [F... 58.5 3e-07
gi|225022800|ref|ZP_03711992.1| hypothetical protein CORMATOL_02... 58.2 4e-07
gi|134097178|ref|YP_001102839.1| MoaD2 [Saccharopolyspora erythr... 58.2 4e-07
>gi|15608008|ref|NP_215383.1| molybdenum cofactor biosynthesis protein D [Mycobacterium tuberculosis
H37Rv]
gi|15840281|ref|NP_335318.1| hypothetical protein MT0891 [Mycobacterium tuberculosis CDC1551]
gi|31792056|ref|NP_854549.1| putative molybdenum cofactor biosynthesis protein D 2 MOAD2 (molybdopterin
converting factor small subunit) (molybdopterin
[MPT] converting factor, subunit 1) [Mycobacterium bovis AF2122/97]
72 more sequence titles
Length=92
Score = 174 bits (442), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/92 (99%), Positives = 92/92 (100%), Gaps = 0/92 (0%)
Query 1 VTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
+TQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR
Sbjct 1 MTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
Query 61 CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG
Sbjct 61 CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
>gi|340625882|ref|YP_004744334.1| putative molybdenum cofactor biosynthesis protein D [Mycobacterium
canettii CIPT 140010059]
gi|340004072|emb|CCC43208.1| putative molybdenum cofactor biosynthesis protein D 2 MOAD2 (molybdopterin
converting factor small subunit) (molybdopterin
[MPT] converting factor, subunit 1) [Mycobacterium canettii
CIPT 140010059]
Length=92
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/92 (98%), Positives = 91/92 (99%), Gaps = 0/92 (0%)
Query 1 VTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
+TQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR
Sbjct 1 MTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
Query 61 CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
CSYLRDGIVVRDDAVALSAGDTIDVL PFAGG
Sbjct 61 CSYLRDGIVVRDDAVALSAGDTIDVLSPFAGG 92
>gi|289749388|ref|ZP_06508766.1| molybdenum cofactor biosynthesis protein D 2 moaD2 [Mycobacterium
tuberculosis T92]
gi|289689975|gb|EFD57404.1| molybdenum cofactor biosynthesis protein D 2 moaD2 [Mycobacterium
tuberculosis T92]
Length=79
Score = 133 bits (334), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/69 (100%), Positives = 69/69 (100%), Gaps = 0/69 (0%)
Query 24 AAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRDDAVALSAGDTI 83
AAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRDDAVALSAGDTI
Sbjct 11 AAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRDDAVALSAGDTI 70
Query 84 DVLPPFAGG 92
DVLPPFAGG
Sbjct 71 DVLPPFAGG 79
>gi|183984631|ref|YP_001852922.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
marinum M]
gi|183177957|gb|ACC43067.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
marinum M]
Length=89
Score = 114 bits (285), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/89 (74%), Positives = 72/89 (81%), Gaps = 0/89 (0%)
Query 4 VSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSY 63
+ D+ AGI+VTVRYFAAARAAAG E V LR ATVAEL+D L+ R RLATVL RCSY
Sbjct 1 MPDQPAGIEVTVRYFAAARAAAGIECETVGLRPDATVAELVDTLAGRSTRLATVLGRCSY 60
Query 64 LRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
LRDGI VR+DA ALS GDT+DVLPPFAGG
Sbjct 61 LRDGIAVRNDATALSTGDTVDVLPPFAGG 89
>gi|240171975|ref|ZP_04750634.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
kansasii ATCC 12478]
Length=80
Score = 114 bits (284), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/80 (80%), Positives = 69/80 (87%), Gaps = 0/80 (0%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
+TVRYFAAARAAAG SE VTLR GATVAEL+D L+ R+ RLATVL RCSYLRDGI VRD
Sbjct 1 MTVRYFAAARAAAGIESETVTLRPGATVAELVDDLAARNARLATVLDRCSYLRDGIAVRD 60
Query 73 DAVALSAGDTIDVLPPFAGG 92
DA LSAGDT+DVLPPFAGG
Sbjct 61 DATPLSAGDTLDVLPPFAGG 80
>gi|296169634|ref|ZP_06851252.1| molybdenum cofactor biosynthesis protein small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295895631|gb|EFG75327.1| molybdenum cofactor biosynthesis protein small subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=96
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/92 (67%), Positives = 73/92 (80%), Gaps = 0/92 (0%)
Query 1 VTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
V++ + E GIQVTVRYFAAARAA GA SE + LR G TVAEL++ L++R RLATVLSR
Sbjct 5 VSETAVEHDGIQVTVRYFAAARAAVGADSETLVLRPGTTVAELVERLAIRGSRLATVLSR 64
Query 61 CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
CSYL DG+ VRD+ +L G+TIDVLPPFAGG
Sbjct 65 CSYLCDGVAVRDETASLRTGNTIDVLPPFAGG 96
>gi|342860481|ref|ZP_08717132.1| ThiS family protein [Mycobacterium colombiense CECT 3035]
gi|342132136|gb|EGT85377.1| ThiS family protein [Mycobacterium colombiense CECT 3035]
Length=80
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/80 (73%), Positives = 65/80 (82%), Gaps = 0/80 (0%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
+TVRYFAAARAAAG SE V LR G TV EL++ L+VR RLATVL+RCSYLRDGI VRD
Sbjct 1 MTVRYFAAARAAAGVESETVVLRPGTTVGELVERLAVRGSRLATVLTRCSYLRDGIAVRD 60
Query 73 DAVALSAGDTIDVLPPFAGG 92
+ AL GDTIDVLPPF+GG
Sbjct 61 ETTALQTGDTIDVLPPFSGG 80
>gi|333989436|ref|YP_004522050.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
sp. JDM601]
gi|333485404|gb|AEF34796.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
sp. JDM601]
Length=92
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/90 (68%), Positives = 71/90 (79%), Gaps = 1/90 (1%)
Query 3 QVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCS 62
Q+SD +A + VTVRYFAAARAAAG SE V++ +GA VAEL + L+ R+ RLATVL RCS
Sbjct 4 QLSDTTA-VAVTVRYFAAARAAAGTDSETVSVPAGAGVAELTETLAGRNERLATVLDRCS 62
Query 63 YLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
YLRDGI VRD AL G+TIDVLPPFAGG
Sbjct 63 YLRDGIAVRDHTAALQPGETIDVLPPFAGG 92
>gi|254823206|ref|ZP_05228207.1| ThiS family protein [Mycobacterium intracellulare ATCC 13950]
Length=92
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/90 (63%), Positives = 68/90 (76%), Gaps = 0/90 (0%)
Query 3 QVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCS 62
Q + GI VTVRYFAAA+AAAG +E + +R G TV EL++ L+ R RLATVLSRCS
Sbjct 3 QSPAQETGIGVTVRYFAAAQAAAGVEAETLVVRPGTTVGELVERLAARGSRLATVLSRCS 62
Query 63 YLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
YL DG+ VRD+ AL +GDTIDVLPPF+GG
Sbjct 63 YLCDGVAVRDETTALRSGDTIDVLPPFSGG 92
>gi|254773882|ref|ZP_05215398.1| ThiS family protein [Mycobacterium avium subsp. avium ATCC 25291]
Length=92
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/86 (69%), Positives = 69/86 (81%), Gaps = 0/86 (0%)
Query 7 ESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRD 66
++ GI VTVRYFAAARAAAGA SE V +R G TV EL++ L+VR RLA VLSRCSYL D
Sbjct 7 QANGISVTVRYFAAARAAAGAESETVVVRPGTTVGELVERLAVRGSRLAEVLSRCSYLCD 66
Query 67 GIVVRDDAVALSAGDTIDVLPPFAGG 92
GI VRD+ +L +GDTIDVLPPF+GG
Sbjct 67 GIAVRDETQSLRSGDTIDVLPPFSGG 92
>gi|118466373|ref|YP_880257.1| ThiS family protein [Mycobacterium avium 104]
gi|118167660|gb|ABK68557.1| ThiS family protein [Mycobacterium avium 104]
Length=92
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/86 (68%), Positives = 68/86 (80%), Gaps = 0/86 (0%)
Query 7 ESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRD 66
++ GI VTVRYFAAARAA GA SE V +R G TV EL++ L+VR RLA VLSRCSYL D
Sbjct 7 QANGISVTVRYFAAARAATGAESETVVVRPGTTVGELVERLAVRGSRLAEVLSRCSYLCD 66
Query 67 GIVVRDDAVALSAGDTIDVLPPFAGG 92
GI VRD+ +L +GDTIDVLPPF+GG
Sbjct 67 GIAVRDETQSLRSGDTIDVLPPFSGG 92
>gi|118616156|ref|YP_904488.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
ulcerans Agy99]
gi|118568266|gb|ABL03017.1| molybdenum cofactor biosynthesis protein D 2 MoaD2 [Mycobacterium
ulcerans Agy99]
Length=97
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/84 (70%), Positives = 65/84 (78%), Gaps = 0/84 (0%)
Query 4 VSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSY 63
+ D+ AGI+VTVRYFAAARAAAG E V LR ATVAEL+D L+ R R ATVL RCSY
Sbjct 1 MPDQPAGIEVTVRYFAAARAAAGIECETVRLRPDATVAELVDTLAGRSTRPATVLGRCSY 60
Query 64 LRDGIVVRDDAVALSAGDTIDVLP 87
LRDGI VR+DA ALS GDT+DV P
Sbjct 61 LRDGIAVRNDATALSTGDTVDVTP 84
>gi|336461252|gb|EGO40127.1| molybdopterin converting factor, small subunit [Mycobacterium
avium subsp. paratuberculosis S397]
Length=92
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/90 (66%), Positives = 70/90 (78%), Gaps = 0/90 (0%)
Query 3 QVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCS 62
+V ++ GI V VRYFAAARAAAGA SE V +R G TV EL++ L+VR RLA VLSRCS
Sbjct 3 RVPVQANGISVMVRYFAAARAAAGAESETVVVRPGTTVGELVERLAVRGSRLAEVLSRCS 62
Query 63 YLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
YL DGI VRD+ +L +GDTIDVLPPF+GG
Sbjct 63 YLCDGIAVRDETQSLRSGDTIDVLPPFSGG 92
>gi|120405997|ref|YP_955826.1| hypothetical protein Mvan_5048 [Mycobacterium vanbaalenii PYR-1]
gi|119958815|gb|ABM15820.1| thiamineS protein [Mycobacterium vanbaalenii PYR-1]
Length=88
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/83 (67%), Positives = 63/83 (76%), Gaps = 0/83 (0%)
Query 10 GIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIV 69
G++VTVRYFAAARAAAG SE V L +GATVAEL++ L RD L+ VL+RCSYLRDG+
Sbjct 6 GVRVTVRYFAAARAAAGTESETVDLHAGATVAELVESLKARDAALSKVLARCSYLRDGVA 65
Query 70 VRDDAVALSAGDTIDVLPPFAGG 92
VRD L TIDVLPPFAGG
Sbjct 66 VRDMRTELGTAATIDVLPPFAGG 88
>gi|41406904|ref|NP_959740.1| MoaD2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41395254|gb|AAS03123.1| MoaD2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length=93
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/91 (66%), Positives = 71/91 (79%), Gaps = 1/91 (1%)
Query 3 QVSDESAGIQVTVRYFAAARAAAGAGSEKVTL-RSGATVAELIDGLSVRDVRLATVLSRC 61
+V ++ GI VTVRYFAAARAAAGA SE V + R G TV EL++ L+VR RLA VLSRC
Sbjct 3 RVPVQANGISVTVRYFAAARAAAGAESETVVVVRPGTTVGELVERLAVRGSRLAEVLSRC 62
Query 62 SYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
SYL DGI VRD+ +L +GDTIDVLPPF+GG
Sbjct 63 SYLCDGIAVRDETQSLRSGDTIDVLPPFSGG 93
>gi|108801441|ref|YP_641638.1| sulfur transfer protein ThiS [Mycobacterium sp. MCS]
gi|119870594|ref|YP_940546.1| sulfur transfer protein ThiS [Mycobacterium sp. KMS]
gi|126437426|ref|YP_001073117.1| sulfur transfer protein ThiS [Mycobacterium sp. JLS]
gi|108771860|gb|ABG10582.1| thiamineS [Mycobacterium sp. MCS]
gi|119696683|gb|ABL93756.1| thiamineS protein [Mycobacterium sp. KMS]
gi|126237226|gb|ABO00627.1| thiamineS protein [Mycobacterium sp. JLS]
Length=88
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/82 (60%), Positives = 60/82 (74%), Gaps = 0/82 (0%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVV 70
++V VRYFAAARAAAG SE +T+ +G TV L+D LS R L VL+RCSYL DG+ V
Sbjct 7 VRVAVRYFAAARAAAGTESEDLTVPAGTTVQALVDELSSRSAELGRVLARCSYLCDGVAV 66
Query 71 RDDAVALSAGDTIDVLPPFAGG 92
RD +AL+ T+DVLPPFAGG
Sbjct 67 RDTTMALANAQTLDVLPPFAGG 88
>gi|333918504|ref|YP_004492085.1| sulfur transfer protein ThiS [Amycolicicoccus subflavus DQS3-9A1]
gi|333480725|gb|AEF39285.1| thiamineS protein [Amycolicicoccus subflavus DQS3-9A1]
Length=82
Score = 83.6 bits (205), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/82 (49%), Positives = 55/82 (68%), Gaps = 0/82 (0%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVV 70
+ +TVRYFAAA AAG E T+ G+T+A+LI LS R+ LA VL +C +L + +
Sbjct 1 MTITVRYFAAAGRAAGTPEETCTIEPGSTLAQLIANLSDRNAELARVLGKCQFLINEMAA 60
Query 71 RDDAVALSAGDTIDVLPPFAGG 92
D ++ +S G T+DVLPPFAGG
Sbjct 61 TDTSIEISEGTTVDVLPPFAGG 82
>gi|315442730|ref|YP_004075609.1| molybdopterin converting factor, small subunit [Mycobacterium
sp. Spyr1]
gi|315261033|gb|ADT97774.1| molybdopterin converting factor, small subunit [Mycobacterium
sp. Spyr1]
Length=88
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/82 (65%), Positives = 61/82 (75%), Gaps = 0/82 (0%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVV 70
++VTVRYFAAARAAAGA SE + + SG TV L+ L RD LA+VL+RCSYLRDG+ V
Sbjct 7 VRVTVRYFAAARAAAGAESETIDVPSGTTVDALVATLRSRDDGLASVLARCSYLRDGVAV 66
Query 71 RDDAVALSAGDTIDVLPPFAGG 92
RD V L TIDVLPPFAGG
Sbjct 67 RDMGVVLDDAQTIDVLPPFAGG 88
>gi|145222296|ref|YP_001132974.1| sulfur transfer protein ThiS [Mycobacterium gilvum PYR-GCK]
gi|145214782|gb|ABP44186.1| thiamineS protein [Mycobacterium gilvum PYR-GCK]
Length=82
Score = 81.6 bits (200), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/82 (65%), Positives = 61/82 (75%), Gaps = 0/82 (0%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVV 70
++VTVRYFAAARAAAGA SE + + SG TV L+ L RD LA+VL+RCSYLRDG+ V
Sbjct 1 MRVTVRYFAAARAAAGAESETIDVPSGTTVDALVATLRSRDDGLASVLARCSYLRDGVAV 60
Query 71 RDDAVALSAGDTIDVLPPFAGG 92
RD V L TIDVLPPFAGG
Sbjct 61 RDMGVVLDDAQTIDVLPPFAGG 82
>gi|118472944|ref|YP_889932.1| ThiS family protein [Mycobacterium smegmatis str. MC2 155]
gi|118174231|gb|ABK75127.1| ThiS family protein [Mycobacterium smegmatis str. MC2 155]
Length=80
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/80 (57%), Positives = 56/80 (70%), Gaps = 0/80 (0%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
+TVRYFAAA AAAG +E + + +G +VAEL++ L R+ LA VL RCSYL D + VRD
Sbjct 1 MTVRYFAAAAAAAGIETESLEIATGTSVAELVERLGARNPELARVLKRCSYLCDEVAVRD 60
Query 73 DAVALSAGDTIDVLPPFAGG 92
A L T+DVLPPFAGG
Sbjct 61 MAKPLVTPQTVDVLPPFAGG 80
>gi|256374623|ref|YP_003098283.1| sulfur carrier protein ThiS [Actinosynnema mirum DSM 43827]
gi|255918926|gb|ACU34437.1| thiamineS protein [Actinosynnema mirum DSM 43827]
Length=87
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/86 (53%), Positives = 58/86 (68%), Gaps = 4/86 (4%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLR---SGATVAELIDGLSVRD-VRLATVLSRCSYLRD 66
+++TVRYFA ARAAAG +E V + SG TVA ++D + + L VL+ S+L D
Sbjct 2 VELTVRYFAGARAAAGVPAETVAVPGAGSGTTVAHVLDVVRAKHGANLTRVLAASSFLLD 61
Query 67 GIVVRDDAVALSAGDTIDVLPPFAGG 92
GI VRD A A+SAG +DVLPPFAGG
Sbjct 62 GIAVRDHAAAVSAGAELDVLPPFAGG 87
>gi|302530571|ref|ZP_07282913.1| molybdopterin converting factor, subunit 1 [Streptomyces sp.
AA4]
gi|302439466|gb|EFL11282.1| molybdopterin converting factor, subunit 1 [Streptomyces sp.
AA4]
Length=93
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/93 (49%), Positives = 60/93 (65%), Gaps = 1/93 (1%)
Query 1 VTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGL-SVRDVRLATVLS 59
+T S ++ + V VRYFA+ARAAAG EKV L +GATVA+ + L + +L+ VL
Sbjct 1 MTSPSVPASPVTVVVRYFASARAAAGTEEEKVELAAGATVADAVQALRELHPGQLSRVLD 60
Query 60 RCSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
S+L + + VRD ALS G +DVLPPFAGG
Sbjct 61 AASFLVNEVAVRDRGRALSDGAHLDVLPPFAGG 93
>gi|25169121|emb|CAD47957.1| putative molybdopterin cofactor synthesis protein moaD [Arthrobacter
nicotinovorans]
Length=88
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/88 (47%), Positives = 53/88 (61%), Gaps = 8/88 (9%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGL-SVRDVR-------LATVLSRCSYL 64
+ VRYFAAAR AAG EK L G TVA L++ + SV+ L +L+RCS+L
Sbjct 1 MNVRYFAAARPAAGLEEEKFDLPEGTTVAGLLEAIQSVQRPEPPAGTPPLPRILARCSFL 60
Query 65 RDGIVVRDDAVALSAGDTIDVLPPFAGG 92
+ + VR+ A L D +DVLPPFAGG
Sbjct 61 LNEVAVRNQATVLGPDDVVDVLPPFAGG 88
>gi|325000988|ref|ZP_08122100.1| putative molybdenum cofactor biosynthesis protein D2 (MoaD2)
/ thiamineS [Pseudonocardia sp. P1]
Length=94
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/92 (53%), Positives = 60/92 (66%), Gaps = 1/92 (1%)
Query 2 TQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGL-SVRDVRLATVLSR 60
T V+ + A +TVRYFAAA+AAAG E V L +GATVA+ + L + LA VL R
Sbjct 3 TSVTPDLATRTLTVRYFAAAKAAAGTPEETVELPAGATVADAVATLRAAHGPELAHVLQR 62
Query 61 CSYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
CS+L D + VRD +VAL +DVLPPFAGG
Sbjct 63 CSFLLDEVAVRDRSVALGGAAALDVLPPFAGG 94
>gi|343523629|ref|ZP_08760590.1| ThiS family protein [Actinomyces sp. oral taxon 175 str. F0384]
gi|343399846|gb|EGV12367.1| ThiS family protein [Actinomyces sp. oral taxon 175 str. F0384]
Length=103
Score = 71.6 bits (174), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/85 (48%), Positives = 56/85 (66%), Gaps = 1/85 (1%)
Query 9 AGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGI 68
A I VT+RYFAAA AAG E++ L +G T+A L + LS R + +A V+ CS+L + +
Sbjct 19 AQISVTLRYFAAATEAAGRPEERLDLPAGTTLAALRERLSGRGLEMARVIPICSFLVNSV 78
Query 69 VVRDDAV-ALSAGDTIDVLPPFAGG 92
D++ L+ GD +DVLPPFAGG
Sbjct 79 STPADSLTPLADGDAVDVLPPFAGG 103
>gi|326771999|ref|ZP_08231284.1| molybdopterin cofactor synthesis protein MoaD [Actinomyces viscosus
C505]
gi|326638132|gb|EGE39033.1| molybdopterin cofactor synthesis protein MoaD [Actinomyces viscosus
C505]
Length=96
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/85 (48%), Positives = 56/85 (66%), Gaps = 1/85 (1%)
Query 9 AGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGI 68
A I VT+RYFAAA AAG E++ L +G T+A L + LS R + +A V+ CS+L + +
Sbjct 12 AQISVTLRYFAAATEAAGRPEERLDLPAGTTLAALREQLSGRGLEMARVIPICSFLVNSV 71
Query 69 VVRDDAV-ALSAGDTIDVLPPFAGG 92
D++ L+ GD +DVLPPFAGG
Sbjct 72 STPADSLTPLADGDAVDVLPPFAGG 96
>gi|284993308|ref|YP_003411863.1| sulfur transfer protein ThiS [Geodermatophilus obscurus DSM 43160]
gi|284066554|gb|ADB77492.1| thiamineS protein [Geodermatophilus obscurus DSM 43160]
Length=82
Score = 70.9 bits (172), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/81 (51%), Positives = 51/81 (63%), Gaps = 4/81 (4%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGL-SVRDVRLATVLSRCSYLRDGIVVR 71
VTVRYFA ARAAAG +E R T+ EL+ + RL VL+ CS+L DG R
Sbjct 5 VTVRYFAGARAAAGVETET---RDAGTLDELVGQIVETHGERLEKVLTACSFLVDGTQTR 61
Query 72 DDAVALSAGDTIDVLPPFAGG 92
D ++AL+ G +DVLPPFAGG
Sbjct 62 DRSLALAPGAVVDVLPPFAGG 82
>gi|330470777|ref|YP_004408520.1| molybdenum cofactor biosynthesis protein [Verrucosispora maris
AB-18-032]
gi|328813748|gb|AEB47920.1| thiamineS protein [Verrucosispora maris AB-18-032]
Length=81
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/80 (53%), Positives = 51/80 (64%), Gaps = 2/80 (2%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
VTVRYFA ARAAAG E T+ +G T+ L+ L+ R RL VL+ ++L DG+ D
Sbjct 4 VTVRYFAGARAAAGLSEE--TVPAGRTLDGLLTELAERHGRLVPVLAVANFLVDGVTCHD 61
Query 73 DAVALSAGDTIDVLPPFAGG 92
L AG TIDVLPPFAGG
Sbjct 62 RDKPLPAGVTIDVLPPFAGG 81
>gi|169627969|ref|YP_001701618.1| putative molybdenum cofactor biosynthesis protein D2 (MoaD2)
/ sulfur transfer protein ThiS [Mycobacterium abscessus ATCC
19977]
gi|169239936|emb|CAM60964.1| Putative molybdenum cofactor biosynthesis protein D2 (MoaD2)
/ thiamineS [Mycobacterium abscessus]
Length=84
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/80 (53%), Positives = 53/80 (67%), Gaps = 0/80 (0%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
+TVRYFAAA AAAG E V L +GA+ +L L+ R L VL+RCS+L DG+ VRD
Sbjct 5 ITVRYFAAAAAAAGLQEETVDLPAGASFDDLTRLLASRGPELERVLARCSFLHDGVAVRD 64
Query 73 DAVALSAGDTIDVLPPFAGG 92
+ +G +DVLPPFAGG
Sbjct 65 RSQRPKSGAVVDVLPPFAGG 84
>gi|296395236|ref|YP_003660120.1| thiamineS protein [Segniliparus rotundus DSM 44985]
gi|296182383|gb|ADG99289.1| thiamineS protein [Segniliparus rotundus DSM 44985]
Length=86
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/85 (52%), Positives = 53/85 (63%), Gaps = 0/85 (0%)
Query 8 SAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDG 67
S G VTVR+FAAA AAG L G T+ ++IDGL LA VL CSYLR+G
Sbjct 2 STGETVTVRFFAAAEEAAGVDEAARPLAEGETLRDVIDGLVRAAPALAGVLCTCSYLRNG 61
Query 68 IVVRDDAVALSAGDTIDVLPPFAGG 92
+ VRD + L GD +DVLPPF+GG
Sbjct 62 VAVRDARLPLEPGDVVDVLPPFSGG 86
>gi|296129600|ref|YP_003636850.1| thiamineS protein [Cellulomonas flavigena DSM 20109]
gi|296021415|gb|ADG74651.1| thiamineS protein [Cellulomonas flavigena DSM 20109]
Length=94
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/83 (52%), Positives = 52/83 (63%), Gaps = 1/83 (1%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRD-VRLATVLSRCSYLRDGIV 69
+ V VRYFAAA AAG +E+V L G TV EL+D L R LA V +RC+ L DG++
Sbjct 12 VTVEVRYFAAAAEAAGCDTEQVHLVPGTTVGELLDALGARHGAGLADVAARCALLVDGVL 71
Query 70 VRDDAVALSAGDTIDVLPPFAGG 92
RD AL +DVLPPFAGG
Sbjct 72 HRDRTAALGEPGRVDVLPPFAGG 94
>gi|257057376|ref|YP_003135208.1| molybdopterin converting factor, small subunit [Saccharomonospora
viridis DSM 43017]
gi|256587248|gb|ACU98381.1| molybdopterin converting factor, small subunit [Saccharomonospora
viridis DSM 43017]
Length=103
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/81 (51%), Positives = 52/81 (65%), Gaps = 1/81 (1%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGL-SVRDVRLATVLSRCSYLRDGIVVR 71
V VRYFA+ARAAAG +E V + A+VA++I L + RL +L S+L DGI VR
Sbjct 23 VLVRYFASARAAAGVETEVVRVPPSASVADVIGHLRTAHPDRLPRILDAASFLLDGIAVR 82
Query 72 DDAVALSAGDTIDVLPPFAGG 92
D +S G +DVLPPFAGG
Sbjct 83 DLTRPVSDGAELDVLPPFAGG 103
>gi|262201213|ref|YP_003272421.1| thiamine S protein [Gordonia bronchialis DSM 43247]
gi|262084560|gb|ACY20528.1| thiamine S protein [Gordonia bronchialis DSM 43247]
Length=82
Score = 67.8 bits (164), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/82 (59%), Positives = 54/82 (66%), Gaps = 0/82 (0%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVV 70
+Q+TVRYFAAARAAAGA S V + TV EL L+ + LA VL RCSYLRD I V
Sbjct 1 MQLTVRYFAAARAAAGAESVVVDVEPATTVGELEALLAAGNPALAAVLPRCSYLRDEIAV 60
Query 71 RDDAVALSAGDTIDVLPPFAGG 92
RD L T+DVLPPFAGG
Sbjct 61 RDRNRPLGHCTTLDVLPPFAGG 82
>gi|295394944|ref|ZP_06805157.1| molybdenum cofactor biosynthesis protein small subunit [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972277|gb|EFG48139.1| molybdenum cofactor biosynthesis protein small subunit [Brevibacterium
mcbrellneri ATCC 49030]
Length=89
Score = 64.7 bits (156), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/91 (46%), Positives = 53/91 (59%), Gaps = 13/91 (14%)
Query 13 VTVRYFAAARAAAGAGSEKV----TLRSGATVAELIDGL-------SVRDVRLATVLSRC 61
++VRYFAAARAA G E V L SGAT + I+ L + L+ VL +C
Sbjct 1 MSVRYFAAARAATGVEQEDVILDGQLSSGATREQFIELLVSLHPEVPAGEPPLSRVLPQC 60
Query 62 SYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
S+L DG+ + D VA G+ +DVLPPFAGG
Sbjct 61 SFLVDGVALTDSTVA--PGNRVDVLPPFAGG 89
>gi|331699403|ref|YP_004335642.1| thiamineS protein [Pseudonocardia dioxanivorans CB1190]
gi|326954092|gb|AEA27789.1| thiamineS protein [Pseudonocardia dioxanivorans CB1190]
Length=90
Score = 64.3 bits (155), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/68 (52%), Positives = 42/68 (62%), Gaps = 1/68 (1%)
Query 26 GAGSEKVTLRSGATVAELIDGLSV-RDVRLATVLSRCSYLRDGIVVRDDAVALSAGDTID 84
G + V L GA+V +L+D L RD A VL RCSYL D I VRD +V + G +D
Sbjct 23 GTETTSVELPEGASVEDLLDTLRAGRDAEFARVLQRCSYLLDEIAVRDTSVVVPHGAVLD 82
Query 85 VLPPFAGG 92
VLPPFAGG
Sbjct 83 VLPPFAGG 90
>gi|117929231|ref|YP_873782.1| sulfur transfer protein ThiS [Acidothermus cellulolyticus 11B]
gi|117649694|gb|ABK53796.1| thiamineS protein [Acidothermus cellulolyticus 11B]
Length=92
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/89 (47%), Positives = 55/89 (62%), Gaps = 6/89 (6%)
Query 7 ESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRD 66
E + TVRY+AAAR AAG SE+V + T+A+++ L R +LA V+SR ++L D
Sbjct 5 EREQPRCTVRYWAAAREAAGVSSEEV---AAGTLADVLHVLRARSPQLAEVVSRSAFLVD 61
Query 67 GIVV--RDDA-VALSAGDTIDVLPPFAGG 92
G+ RD V L G +DVLPPFAGG
Sbjct 62 GVPAGRRDPTQVLLHRGSVVDVLPPFAGG 90
>gi|260904728|ref|ZP_05913050.1| ThiS family protein [Brevibacterium linens BL2]
Length=81
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/83 (45%), Positives = 51/83 (62%), Gaps = 6/83 (7%)
Query 12 QVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRD--VRLATVLSRCSYLRDGIV 69
Q+ VR+FAAAR A G K + + +T+ EL+ L+ +D TV+SR S+L + +
Sbjct 3 QIRVRFFAAAREAFGT---KESTAAASTIDELMTTLT-KDASTEATTVISRSSFLVNAVA 58
Query 70 VRDDAVALSAGDTIDVLPPFAGG 92
D LS GDT+DVLPPFAGG
Sbjct 59 ATDPQAPLSEGDTVDVLPPFAGG 81
>gi|325962826|ref|YP_004240732.1| molybdopterin converting factor, small subunit [Arthrobacter
phenanthrenivorans Sphe3]
gi|323468913|gb|ADX72598.1| molybdopterin converting factor, small subunit [Arthrobacter
phenanthrenivorans Sphe3]
Length=88
Score = 63.5 bits (153), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 54/88 (62%), Gaps = 8/88 (9%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDG-LSVRDVR-------LATVLSRCSYL 64
+ VRYFAAARAAAG E+ L GATVA+L++ LSV L +LSR S+L
Sbjct 1 MNVRYFAAARAAAGLEEERFELAPGATVADLLEAVLSVERPEPPAGTPPLPRILSRSSFL 60
Query 65 RDGIVVRDDAVALSAGDTIDVLPPFAGG 92
+ + VRD L A D +DVLPPFAGG
Sbjct 61 LNEVAVRDHGAVLKADDVVDVLPPFAGG 88
>gi|220912212|ref|YP_002487521.1| sulfur carrier protein ThiS [Arthrobacter chlorophenolicus A6]
gi|219859090|gb|ACL39432.1| thiamineS protein [Arthrobacter chlorophenolicus A6]
Length=88
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/88 (53%), Positives = 57/88 (65%), Gaps = 8/88 (9%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDG-LSVR-------DVRLATVLSRCSYL 64
+ VRYFAAARAAAG EK L +GATVA+L+D L+V LA +LSR S+L
Sbjct 1 MHVRYFAAARAAAGFEEEKFDLPAGATVADLLDAVLAVPREEPPAGTPPLARILSRSSFL 60
Query 65 RDGIVVRDDAVALSAGDTIDVLPPFAGG 92
+ + VRD A + A D +DVLPPFAGG
Sbjct 61 LNEVAVRDRATVVGADDVLDVLPPFAGG 88
>gi|320533679|ref|ZP_08034300.1| ThiS family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320134110|gb|EFW26437.1| ThiS family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length=102
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/93 (45%), Positives = 59/93 (64%), Gaps = 3/93 (3%)
Query 1 VTQVSDESAGIQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSR 60
V Q S E I VT+RYFAAA AAG E++ L +G T+A L + L+ + + +A V+
Sbjct 12 VAQASPEQ--ISVTLRYFAAAAEAAGRPEERLDLPTGTTLAGLREQLAGQGLEMARVIPI 69
Query 61 CSYLRDGIVVRDDAV-ALSAGDTIDVLPPFAGG 92
CS+L + + D++ L+ GD +DVLPPFAGG
Sbjct 70 CSFLVNSVSTPADSLTPLADGDAVDVLPPFAGG 102
>gi|317509217|ref|ZP_07966838.1| ThiS family protein [Segniliparus rugosus ATCC BAA-974]
gi|316252427|gb|EFV11876.1| ThiS family protein [Segniliparus rugosus ATCC BAA-974]
Length=85
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 0/80 (0%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
VT+R+FAAA AAG R G T+ EL++ L L+ VL CSYLR+ + RD
Sbjct 6 VTIRFFAAAEEAAGEAETTRPYREGVTLTELLEELVRAKPELSGVLRTCSYLRNSVAARD 65
Query 73 DAVALSAGDTIDVLPPFAGG 92
L+ GD +D+LPPF+GG
Sbjct 66 LGRPLAPGDVVDILPPFSGG 85
>gi|296138554|ref|YP_003645797.1| sulfur carrier protein ThiS [Tsukamurella paurometabola DSM 20162]
gi|296026688|gb|ADG77458.1| thiamineS protein [Tsukamurella paurometabola DSM 20162]
Length=79
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/78 (56%), Positives = 52/78 (67%), Gaps = 1/78 (1%)
Query 15 VRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRDDA 74
+RYFAAARAAAG E V + +GA+V+++ L R L TVL RCSYL D + VR D
Sbjct 3 IRYFAAARAAAGVDEEVVDVPAGASVSDIARLLGERHPDLVTVLRRCSYLLDEVAVR-DV 61
Query 75 VALSAGDTIDVLPPFAGG 92
A + G IDVLPPFAGG
Sbjct 62 NAQANGVMIDVLPPFAGG 79
>gi|148273531|ref|YP_001223092.1| putative molybdopterin converting factor [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147831461|emb|CAN02421.1| putative molybdopterin converting factor [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length=84
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (41%), Positives = 49/84 (59%), Gaps = 6/84 (7%)
Query 15 VRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVR------DVRLATVLSRCSYLRDGI 68
+ FAAA AA G ++++ L GA + +L+D L R A VL+RC+YL +G+
Sbjct 1 MELFAAASAALGRTTDELDLPDGAALGDLMDALGSRAAASEDPANAAAVLARCTYLVEGV 60
Query 69 VVRDDAVALSAGDTIDVLPPFAGG 92
D L+AG +DVLPPF+GG
Sbjct 61 ATTDRDAPLTAGSAVDVLPPFSGG 84
>gi|300790324|ref|YP_003770615.1| ThiS/MoaD family protein [Amycolatopsis mediterranei U32]
gi|299799838|gb|ADJ50213.1| ThiS/MoaD family protein [Amycolatopsis mediterranei U32]
gi|340532005|gb|AEK47210.1| ThiS/MoaD family protein [Amycolatopsis mediterranei S699]
Length=83
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/83 (52%), Positives = 53/83 (64%), Gaps = 1/83 (1%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLS-VRDVRLATVLSRCSYLRDGIV 69
+ + VRYFAAARAAAG EKV L +GA+VA+ + L+ + L +L SYL DGI
Sbjct 1 MTIVVRYFAAARAAAGVEEEKVQLAAGASVADAVAELARLHPAGLPRLLEAVSYLLDGIA 60
Query 70 VRDDAVALSAGDTIDVLPPFAGG 92
VRD L G +DVLPPFAGG
Sbjct 61 VRDLTRPLRDGAELDVLPPFAGG 83
>gi|302870674|ref|YP_003839311.1| sulfur transfer protein ThiS [Micromonospora aurantiaca ATCC
27029]
gi|315506911|ref|YP_004085798.1| sulfur transfer protein ThiS [Micromonospora sp. L5]
gi|302573533|gb|ADL49735.1| thiamineS protein [Micromonospora aurantiaca ATCC 27029]
gi|315413530|gb|ADU11647.1| thiamineS protein [Micromonospora sp. L5]
Length=81
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/83 (52%), Positives = 54/83 (66%), Gaps = 3/83 (3%)
Query 11 IQVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRD-VRLATVLSRCSYLRDGIV 69
+++TVRYFA ARAAAG E T +G ++ EL+D L+ R RLA VL S+L DG+
Sbjct 1 MELTVRYFAGARAAAGRSEE--TASAGRSLDELLDDLAARHGERLAVVLKAASFLVDGVA 58
Query 70 VRDDAVALSAGDTIDVLPPFAGG 92
D L AG T+DVLPPFAGG
Sbjct 59 CHDRRALLPAGVTVDVLPPFAGG 81
>gi|329945323|ref|ZP_08293114.1| ThiS family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328529198|gb|EGF56126.1| ThiS family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length=102
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/81 (46%), Positives = 54/81 (67%), Gaps = 1/81 (1%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDVRLATVLSRCSYLRDGIVVRD 72
VT+RYFAAA AAG E++ L +G T+A L + L+ R + +A V+ CS+L + +
Sbjct 22 VTLRYFAAAAEAAGRPEERLDLPAGTTLAGLREQLAGRGLEMARVVPICSFLVNSVSTPA 81
Query 73 DAV-ALSAGDTIDVLPPFAGG 92
D++ L+ GD +DVLPPFAGG
Sbjct 82 DSLTPLADGDAVDVLPPFAGG 102
>gi|170782850|ref|YP_001711184.1| putative molybdopterin converting factor [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157420|emb|CAQ02609.1| putative molybdopterin converting factor [Clavibacter michiganensis
subsp. sepedonicus]
Length=87
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (42%), Positives = 49/86 (57%), Gaps = 7/86 (8%)
Query 13 VTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVR------DVRLATVLSRCSYLRD 66
V V FAAA AA G ++ + L S A + +L+D L R A VL+RC+YL +
Sbjct 3 VPVELFAAA-AALGRTTDTLDLPSAAVLGDLMDALGTRAAASEDPANAAAVLARCTYLVE 61
Query 67 GIVVRDDAVALSAGDTIDVLPPFAGG 92
G+ D L+AG +DVLPPF+GG
Sbjct 62 GVATTDRDAPLTAGSAVDVLPPFSGG 87
>gi|336179909|ref|YP_004585284.1| sulfur transfer protein ThiS [Frankia symbiont of Datisca glomerata]
gi|334860889|gb|AEH11363.1| thiamineS protein [Frankia symbiont of Datisca glomerata]
Length=84
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/85 (45%), Positives = 54/85 (64%), Gaps = 7/85 (8%)
Query 12 QVTVRYFAAARAAAGAGSEKVTLRSGATVAELIDGLSVRDV-RLATVLSRCSYLRDGIVV 70
+VTVRY+AAAR AAG E+ + T+A L+ ++ LA +L+RC++L D + V
Sbjct 3 RVTVRYWAAARHAAGVPEER---QDAETLAHLLATVAKHHPGTLAELLTRCAFLVDDLPV 59
Query 71 --RDDA-VALSAGDTIDVLPPFAGG 92
RD A V L+ G ++VLPPFAGG
Sbjct 60 GHRDHADVTLTDGAVVEVLPPFAGG 84
>gi|225022800|ref|ZP_03711992.1| hypothetical protein CORMATOL_02845 [Corynebacterium matruchotii
ATCC 33806]
gi|224944407|gb|EEG25616.1| hypothetical protein CORMATOL_02845 [Corynebacterium matruchotii
ATCC 33806]
Length=116
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/86 (49%), Positives = 54/86 (63%), Gaps = 10/86 (11%)
Query 15 VRYFAAARAAAGAGSEKVTLRSGATVAELID--------GLSVRDVRLATVLSRCSYLRD 66
+ YFAAARAA G E++T + AT+AEL+D G + + LA VLSRCS+L D
Sbjct 33 IHYFAAARAARGLAHERIT-TTAATLAELVDELGRLPDTGTTDSGLSLAQVLSRCSFLVD 91
Query 67 GIVVRDDAVALSAGDTIDVLPPFAGG 92
G D A+SA + +DVLPPFAGG
Sbjct 92 GRHANMDT-AISAAERVDVLPPFAGG 116
>gi|134097178|ref|YP_001102839.1| MoaD2 [Saccharopolyspora erythraea NRRL 2338]
gi|291005365|ref|ZP_06563338.1| MoaD2 [Saccharopolyspora erythraea NRRL 2338]
gi|133909801|emb|CAL99913.1| MoaD2 [Saccharopolyspora erythraea NRRL 2338]
Length=95
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/91 (50%), Positives = 53/91 (59%), Gaps = 6/91 (6%)
Query 8 SAGIQVTVRYFAAARAAAGAGSEKVTLRSGA-----TVAELIDG-LSVRDVRLATVLSRC 61
S + V VRYFA ARAAAG E V L A ++LI+ LS RLA V+ C
Sbjct 5 SEHLAVKVRYFAGARAAAGVAEEVVRLARPADGRPVRASDLIEAVLSTHGERLAEVVPAC 64
Query 62 SYLRDGIVVRDDAVALSAGDTIDVLPPFAGG 92
S+L DG+ VRD AV + G DVLPPFAGG
Sbjct 65 SFLLDGVAVRDRAVEIPDGAEFDVLPPFAGG 95
Lambda K H
0.318 0.133 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128268350160
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40