BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0872c Length=606 Score E Sequences producing significant alignments: (Bits) Value gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacteri... 1003 0.0 gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacteriu... 314 4e-83 gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacteri... 307 4e-81 gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacteri... 304 3e-80 gi|313657701|ref|ZP_07814581.1| PE-PGRS family protein [Mycobact... 300 7e-79 gi|254231180|ref|ZP_04924507.1| PE-PGRS family protein [Mycobact... 299 1e-78 gi|289752927|ref|ZP_06512305.1| predicted protein [Mycobacterium... 228 2e-57 gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacter... 187 6e-45 gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacteri... 182 1e-43 gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobac... 181 4e-43 gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobact... 181 4e-43 gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacteri... 181 4e-43 gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobac... 181 4e-43 gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobac... 181 4e-43 gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobac... 180 5e-43 gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacteri... 180 6e-43 gi|339295694|gb|AEJ47805.1| PE_PGRS family protein [Mycobacteriu... 180 8e-43 gi|339299309|gb|AEJ51419.1| putative PE family protein [Mycobact... 179 9e-43 gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobac... 176 1e-41 gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobact... 165 2e-38 gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobac... 156 8e-36 gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacteriu... 149 1e-33 gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobac... 149 1e-33 gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobac... 149 2e-33 gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacteri... 148 2e-33 gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobac... 148 3e-33 gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobact... 147 5e-33 gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobac... 147 6e-33 gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS... 146 1e-32 gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobac... 145 3e-32 gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacter... 144 3e-32 gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobac... 144 5e-32 gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacter... 144 5e-32 gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobac... 144 6e-32 gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacteri... 143 7e-32 gi|183984243|ref|YP_001852534.1| PE-PGRS family protein [Mycobac... 142 2e-31 gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobac... 140 6e-31 gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531... 140 9e-31 gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS... 139 2e-30 gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobac... 136 1e-29 gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacteri... 136 1e-29 gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted p... 135 1e-29 gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacteri... 135 2e-29 gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobac... 135 2e-29 gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobact... 135 2e-29 gi|183982505|ref|YP_001850796.1| PE-PGRS family protein, PE_PGRS... 130 7e-28 gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobac... 130 8e-28 gi|118616393|ref|YP_904725.1| PE-PGRS family protein [Mycobacter... 128 3e-27 >gi|57116793|ref|YP_177763.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660649|ref|YP_001282172.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476127|pir||H70816 hypothetical glycine-rich protein Rv0872c - Mycobacterium tuberculosis (strain H37RV) gi|38490245|emb|CAE55332.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504801|gb|ABQ72610.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=606 Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust. Identities = 606/606 (100%), Positives = 606/606 (100%), Gaps = 0/606 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA Sbjct 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 Query 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASALGTGGEGGIGGQGGNGGAGGL 480 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASALGTGGEGGIGGQGGNGGAGGL Sbjct 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASALGTGGEGGIGGQGGNGGAGGL 480 Query 481 LIGNGGAGGVGGTAGAGGTGGSGGAGGAGGAGGGGTNSGPGAAFGGNGNTGGNGGNGGAP 540 LIGNGGAGGVGGTAGAGGTGGSGGAGGAGGAGGGGTNSGPGAAFGGNGNTGGNGGNGGAP Sbjct 481 LIGNGGAGGVGGTAGAGGTGGSGGAGGAGGAGGGGTNSGPGAAFGGNGNTGGNGGNGGAP 540 Query 541 GALGGKGGSGGLIGRAGSDGGVGAGGAGGAGGAGGTGGEGGTGGDGKTTDGNPGMGGSPG 600 GALGGKGGSGGLIGRAGSDGGVGAGGAGGAGGAGGTGGEGGTGGDGKTTDGNPGMGGSPG Sbjct 541 GALGGKGGSGGLIGRAGSDGGVGAGGAGGAGGAGGTGGEGGTGGDGKTTDGNPGMGGSPG 600 Query 601 SAGQPG 606 SAGQPG Sbjct 601 SAGQPG 606 >gi|339297525|gb|AEJ49635.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=650 Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 460/460 (100%), Positives = 460/460 (100%), Gaps = 0/460 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA Sbjct 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 Query 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 460 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL Sbjct 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 460 >gi|15840285|ref|NP_335322.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|121636795|ref|YP_977018.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822080|ref|YP_001286834.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 18 more sequence titles Length=609 Score = 307 bits (786), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 460/460 (100%), Positives = 460/460 (100%), Gaps = 0/460 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA Sbjct 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 Query 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 460 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL Sbjct 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 460 >gi|31792060|ref|NP_854553.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617647|emb|CAD93757.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=608 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 458/460 (99%), Positives = 458/460 (99%), Gaps = 1/460 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA Sbjct 361 PSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRGGLLIGDGGAGGAGGVGGTGGSGA 420 Query 421 PGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 460 GGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL Sbjct 421 -PGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGASAL 459 >gi|313657701|ref|ZP_07814581.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=406 Score = 300 bits (767), Expect = 7e-79, Method: Compositional matrix adjust. Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFAS 381 PSNAEAGNGGSGGNGFDSFAS Sbjct 361 PSNAEAGNGGSGGNGFDSFAS 381 >gi|254231180|ref|ZP_04924507.1| PE-PGRS family protein [Mycobacterium tuberculosis C] gi|124600239|gb|EAY59249.1| PE-PGRS family protein [Mycobacterium tuberculosis C] Length=417 Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 381/381 (100%), Positives = 381/381 (100%), Gaps = 0/381 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ Sbjct 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN Sbjct 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV Sbjct 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV Sbjct 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 Query 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG Sbjct 241 NPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAMTSGGAGGSGGNAVSTVNGDAVGG 300 Query 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS Sbjct 301 EGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGNAQAPGGVGGAGGEGGDAQVGTNS 360 Query 361 PSNAEAGNGGSGGNGFDSFAS 381 PSNAEAGNGGSGGNGFDSFAS Sbjct 361 PSNAEAGNGGSGGNGFDSFAS 381 >gi|289752927|ref|ZP_06512305.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289693514|gb|EFD60943.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=582 Score = 228 bits (582), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 414/423 (98%), Positives = 414/423 (98%), Gaps = 1/423 (0%) Query 39 VLAAGADEVSAA-VASLFSGHAQAYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASP 97 AAGADEVS A F GHAQAYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASP Sbjct 11 CWAAGADEVSVAGAVPCFFGHAQAYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASP 70 Query 98 LQQALNVINAPTQTLLGRPLIGNGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAG 157 LQQALNVINAPTQTLLGRPLIGNGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAG Sbjct 71 LQQALNVINAPTQTLLGRPLIGNGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAG 130 Query 158 GSAGLIGIGGTGGAGGAGAVGGVGGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGN 217 GSAGLIGIGGTGGAGGAGAVGGVGGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGN Sbjct 131 GSAGLIGIGGTGGAGGAGAVGGVGGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGN 190 Query 218 AYLFGSGGAGGQGGMGAAGADGVNPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAM 277 AYLFGSGGAGGQGGMGAAGADGVNPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAM Sbjct 191 AYLFGSGGAGGQGGMGAAGADGVNPTPTGTADAGSTGTDQTLGGNAIGGNGGPGDAGDAM 250 Query 278 TSGGAGGSGGNAVSTVNGDAVGGEGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGN 337 TSGGAGGSGGNAVSTVNGDAVGGEGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGN Sbjct 251 TSGGAGGSGGNAVSTVNGDAVGGEGGKGGEGAYGGAGGAGGSAASIGNAAIGGNGGAGGN 310 Query 338 AQAPGGVGGAGGEGGDAQVGTNSPSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRG 397 AQAPGGVGGAGGEGGDAQVGTNSPSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRG Sbjct 311 AQAPGGVGGAGGEGGDAQVGTNSPSNAEAGNGGSGGNGFDSFASGGTGGAGGTGGAGGRG 370 Query 398 GLLIGDGGAGGAGGVGGTGGSGAPGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGA 457 GLLIGDGGAGGAGGVGGTGGSGAPGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGA Sbjct 371 GLLIGDGGAGGAGGVGGTGGSGAPGGGGGAGGDGGAANTDSAGSSRKAFGGDGGVGGDGA 430 Query 458 SAL 460 SAL Sbjct 431 SAL 433 >gi|121638733|ref|YP_978957.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991225|ref|YP_002645914.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121494381|emb|CAL72862.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224774340|dbj|BAH27146.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341602771|emb|CCC65449.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=597 Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 178/257 (70%), Positives = 202/257 (79%), Gaps = 1/257 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 G +G+ GQAGGPGGLLYGNGGNG +GG QAGGAGG+AGLIG GG GGAGG GAVGG Sbjct 121 GADGS-TPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGN 179 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 GG G L+GNGGAGG GG G+AG+NGG G GG GGNA LFG GGAGG GG GA G G Sbjct 180 GGTGDLLFGNGGAGGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGT 239 Query 241 NPTPTGTADAGSTGTDQ 257 NPTP GTA GS G +Q Sbjct 240 NPTPIGTAAPGSDGVNQ 256 >gi|57117029|ref|YP_177909.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7476147|pir||H70589 hypothetical glycine-rich protein Rv2853 - Mycobacterium tuberculosis (strain H37RV) gi|41352758|emb|CAE55525.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|344220685|gb|AEN01316.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=615 Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 178/257 (70%), Positives = 202/257 (79%), Gaps = 1/257 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 G +G+ GQAGGPGGLLYGNGGNG +GG QAGGAGG+AGLIG GG GGAGG GAVGG Sbjct 121 GADGS-TPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGK 179 Query 181 GGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGV 240 G GG L+GNGGAGG GG G+AG+NGG G GG GGNA LFG GGAGG GG GA G G Sbjct 180 RGTGGLLFGNGGAGGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGT 239 Query 241 NPTPTGTADAGSTGTDQ 257 NPTP GTA GS G +Q Sbjct 240 NPTPIGTAAPGSDGVNQ 256 >gi|339632862|ref|YP_004724504.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332218|emb|CCC27928.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=615 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 102/125 (82%), Gaps = 0/125 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGA 125 G +G+ Sbjct 121 GADGS 125 >gi|297635466|ref|ZP_06953246.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|297732465|ref|ZP_06961583.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=615 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 102/125 (82%), Gaps = 0/125 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGA 125 G +G+ Sbjct 121 GADGS 125 >gi|31794030|ref|NP_856523.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31619624|emb|CAD95063.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=615 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 102/125 (82%), Gaps = 0/125 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGA 125 G +G+ Sbjct 121 GADGS 125 >gi|148824043|ref|YP_001288797.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|253798061|ref|YP_003031062.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|254232947|ref|ZP_04926274.1| PE-PGRS family protein [Mycobacterium tuberculosis C] 6 more sequence titles Length=663 Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 102/125 (82%), Gaps = 0/125 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168 Query 121 GTNGA 125 G +G+ Sbjct 169 GADGS 173 >gi|148662694|ref|YP_001284217.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148506846|gb|ABQ74655.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=614 Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 177/255 (70%), Positives = 201/255 (79%), Gaps = 1/255 (0%) Query 3 YVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQAY 62 YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA++Y Sbjct 2 YVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSY 61 Query 63 QTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGNGT 122 QTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGNG Sbjct 62 QTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGA 121 Query 123 NGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGVGG 182 +G+ GQAGGPGGLLYGNGGNG +GG QAGGAGG+AGLIG GG GGAGG GAVGG G Sbjct 122 DGS-TPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKRG 180 Query 183 NGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAGADGVNP 242 GG L+GNGGAGG GG G+AG+NGG G GG GGNA LFG GGAGG GG GA G G NP Sbjct 181 TGGLLFGNGGAGGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNP 240 Query 243 TPTGTADAGSTGTDQ 257 TP GTA GS G +Q Sbjct 241 TPIGTAAPGSDGVNQ 255 >gi|340627846|ref|YP_004746298.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340006036|emb|CCC45206.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=615 Score = 180 bits (457), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 84/125 (68%), Positives = 102/125 (82%), Gaps = 0/125 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNGA 125 G +G+ Sbjct 121 GADGS 125 >gi|15842394|ref|NP_337431.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13882694|gb|AAK47245.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=663 Score = 180 bits (457), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 84/124 (68%), Positives = 101/124 (82%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 49 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 108 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 109 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 168 Query 121 GTNG 124 G +G Sbjct 169 GADG 172 >gi|339295694|gb|AEJ47805.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=558 Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 84/124 (68%), Positives = 101/124 (82%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNG 124 G +G Sbjct 121 GADG 124 >gi|339299309|gb|AEJ51419.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=479 Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 84/124 (68%), Positives = 101/124 (82%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 M YV+A+P+++ AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA+ Sbjct 1 MLYVVASPDLMTAAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 +YQTL TQAAAFH RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGN Sbjct 61 SYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGN 120 Query 121 GTNG 124 G +G Sbjct 121 GADG 124 >gi|183984120|ref|YP_001852411.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177446|gb|ACC42556.1| PE-PGRS family protein [Mycobacterium marinum M] Length=600 Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 162/266 (61%), Positives = 186/266 (70%), Gaps = 25/266 (9%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V+ +PE++A A +LA IGS +S AN AA APT G LAAGADEVSAAVA++FSGHAQ Sbjct 1 MSFVVVSPEVLAVAGRDLASIGSAISQANVAAAAPTMGALAAGADEVSAAVAAVFSGHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQ LG Q AAFH++ + AL AAG Y SAE ANASPLQ L+V+NAP Q LLGRPLIGN Sbjct 61 AYQALGAQVAAFHDQLVTALDAAAGKYASAEVANASPLQAVLDVVNAPAQALLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGS--------------------- 159 G +G GTGQ+GG GG+LYGNGG+GGSG GQ GG GGS Sbjct 121 GDDGVAGTGQSGGDGGILYGNGGDGGSGASGQIGGTGGSAGLIGAGGTGGAGGLGAAGGA 180 Query 160 ----AGLIGIGGTGGAGGAGAVGGVGGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAG 215 L G GG GG GG+GA GG GGNGGWLYG+GGAGG GG +N G GG G Sbjct 181 GGNGGWLFGQGGAGGIGGSGAAGGAGGNGGWLYGDGGAGGQGGAAAESINDGSPGQGGNG 240 Query 216 GNAYLFGSGGAGGQGGMGAAGADGVN 241 G+AYLFG+GG+GGQGG G AGADGVN Sbjct 241 GSAYLFGNGGSGGQGGTGLAGADGVN 266 >gi|294994057|ref|ZP_06799748.1| PE_PGRS family protein [Mycobacterium tuberculosis 210] Length=604 Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 79/113 (70%), Positives = 92/113 (82%), Gaps = 0/113 (0%) Query 13 AAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQAYQTLGTQAAAF 72 AAA NLA+IGS +S AN AA PT V+AA ADEVS +A+LF HA++YQTL TQAAAF Sbjct 2 AAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAF 61 Query 73 HERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGNGTNGA 125 H RF+QAL+TAA +Y S EAANASPLQ AL+VINAP QTLLGRPLIGNG +G+ Sbjct 62 HSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGADGS 114 >gi|183985307|ref|YP_001853598.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178633|gb|ACC43743.1| PE-PGRS family protein [Mycobacterium marinum M] Length=600 Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 78/127 (62%), Positives = 99/127 (78%), Gaps = 4/127 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSY++A+PE +A++A +L ++GS ++ ANAAA APTTGVLAA DEVS +A+LF HA Sbjct 1 MSYLIASPEHLASSARDLVRLGSVVADANAAAAAPTTGVLAAAVDEVSIQIAALFGAHAH 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 +YQ L QAA FHE+F+Q L+TA+ AY SAEA NASPL QQ L+VINAPT+ LLGRP Sbjct 61 SYQQLSAQAATFHEQFVQTLATASRAYASAEAVNASPLQTLEQQVLSVINAPTEALLGRP 120 Query 117 LIGNGTN 123 LIG+G N Sbjct 121 LIGDGAN 127 >gi|344220317|gb|AEN00948.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1644 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 77/124 (63%), Positives = 97/124 (79%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYV+ATPEM+A AA +LA+IGS +SAA+A A PTT V+AAGADEVSA +A+LFS HAQ Sbjct 1 MSYVIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQ L QAAAFH++F+ L+ AA Y + E ANA+ ++ L +NAPTQTLLGRPLIG+ Sbjct 61 EYQALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGD 120 Query 121 GTNG 124 G +G Sbjct 121 GAHG 124 >gi|148822671|ref|YP_001287425.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721198|gb|ABR05823.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=737 Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339631519|ref|YP_004723161.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330875|emb|CCC26546.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=805 Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|15840912|ref|NP_335949.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881115|gb|AAK45763.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=738 Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|340626466|ref|YP_004744918.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004656|emb|CCC43800.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=1006 Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 76/122 (63%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE+VAAAA+++A+IGS AAN+ A TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVTPELVAAAASDVARIGSGFGAANSTAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF+Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFVQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339298064|gb|AEJ50174.1| putative PE family protein [Mycobacterium tuberculosis CCDC5180] Length=1330 Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 92/122 (76%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AN+AA TT VLAAGAD+VSAA+A+LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGVANSAAAGSTTSVLAAGADDVSAAIATLFGSHAR 61 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|183982655|ref|YP_001850946.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175981|gb|ACC41091.1| PE-PGRS family protein [Mycobacterium marinum M] Length=625 Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust. Identities = 90/126 (72%), Positives = 105/126 (84%), Gaps = 0/126 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSY++A PEMVAAAA +LA +GS++SAANAAA APT VLAAGADEVSA VA+LF HAQ Sbjct 1 MSYLIAAPEMVAAAATDLASVGSSISAANAAAAAPTMSVLAAGADEVSAVVAALFDAHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQ+L QAA FHE+F+QAL+ AG+Y AEAA+ SPLQ ALN+INAPTQ L GRPLIGN Sbjct 61 AYQSLSAQAALFHEQFVQALNAGAGSYALAEAASVSPLQDALNLINAPTQALFGRPLIGN 120 Query 121 GTNGAP 126 G +GAP Sbjct 121 GADGAP 126 >gi|183982507|ref|YP_001850798.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M] gi|183175833|gb|ACC40943.1| PE-PGRS family protein, PE_PGRS15_2 [Mycobacterium marinum M] Length=637 Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 82/124 (67%), Positives = 97/124 (79%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+++A P+MVAAAA +LA IGST++ ANAAA A TT V AA ADEVS AVA +F +AQ Sbjct 1 MSFLIAAPDMVAAAATDLASIGSTINTANAAASALTTSVAAAAADEVSTAVAHVFDTYAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQT G AAFH++F+Q L T A AY AEAANASPLQ+ LN +NAPTQ LLGRPLIGN Sbjct 61 EYQTFGAHMAAFHDQFVQTLKTGALAYTGAEAANASPLQELLNAVNAPTQALLGRPLIGN 120 Query 121 GTNG 124 GT+G Sbjct 121 GTDG 124 >gi|224989857|ref|YP_002644544.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|224772970|dbj|BAH25776.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601401|emb|CCC64074.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=740 Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 90/122 (74%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|121637382|ref|YP_977605.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|121493029|emb|CAL71500.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] Length=740 Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 90/122 (74%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|339631517|ref|YP_004723159.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339330873|emb|CCC26544.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=1389 Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 90/122 (74%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|121637380|ref|YP_977603.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989855|ref|YP_002644542.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121493027|emb|CAL71498.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772968|dbj|BAH25774.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341601399|emb|CCC64072.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=1399 Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 90/122 (74%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|183985012|ref|YP_001853303.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183178338|gb|ACC43448.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1451 Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust. Identities = 88/139 (64%), Positives = 111/139 (80%), Gaps = 0/139 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSY++A PE++ +AA +LA I S LSAAN +A PTT +LAAGADEVSAA+A+LF HAQ Sbjct 1 MSYLIAAPELMQSAAADLAGIESALSAANVSAAVPTTQILAAGADEVSAAIAALFGAHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 AYQ LG+ AFH+ F+QAL++ A +Y +AEAA+ +PLQ +++NAPTQ LLGRPLIGN Sbjct 61 AYQALGSHVTAFHQEFVQALNSGAASYANAEAASIAPLQALYDLVNAPTQALLGRPLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLY 139 G NGAPGTGQ GG GGLL+ Sbjct 121 GANGAPGTGQNGGDGGLLF 139 >gi|31792644|ref|NP_855137.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31618234|emb|CAD96152.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=1408 Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust. Identities = 75/122 (62%), Positives = 90/122 (74%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AN+AA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGVANSAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|183984243|ref|YP_001852534.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183177569|gb|ACC42679.1| PE-PGRS family protein [Mycobacterium marinum M] Length=670 Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 81/127 (64%), Positives = 95/127 (75%), Gaps = 4/127 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V A PE +AA + LA IGS L ANAAA PTTG+LAAGADEVSAA+A+LF HA Sbjct 1 MSFVFAVPETMAAVTSELATIGSNLEMANAAAALPTTGLLAAGADEVSAAIAALFDEHAL 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQ----QALNVINAPTQTLLGRP 116 YQT+ QA+AFH RF+ AL+T AGAY +AEAAN+SPLQ LN INAP Q+L GRP Sbjct 61 GYQTISAQASAFHARFMSALNTGAGAYAAAEAANSSPLQALQDLTLNAINAPAQSLFGRP 120 Query 117 LIGNGTN 123 LIG+G N Sbjct 121 LIGDGAN 127 >gi|253799499|ref|YP_003032500.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289554759|ref|ZP_06443969.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|253321002|gb|ACT25605.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289439391|gb|EFD21884.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|328459247|gb|AEB04670.1| hypothetical protein TBSG_02541 [Mycobacterium tuberculosis KZN 4207] Length=738 Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 78/122 (64%), Positives = 93/122 (77%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|253799501|ref|YP_003032502.1| hypothetical protein TBMG_02531 [Mycobacterium tuberculosis KZN 1435] gi|253321004|gb|ACT25607.1| predicted protein [Mycobacterium tuberculosis KZN 1435] gi|328459249|gb|AEB04672.1| hypothetical protein TBSG_02543 [Mycobacterium tuberculosis KZN 4207] Length=1408 Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust. Identities = 78/122 (64%), Positives = 93/122 (77%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ TPE VAAAA+++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 2 MSLVIVTPETVAAAASDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|183985103|ref|YP_001853394.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] gi|183178429|gb|ACC43539.1| PE-PGRS family protein, PE_PGRS15 [Mycobacterium marinum M] Length=681 Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 162/248 (66%), Positives = 187/248 (76%), Gaps = 4/248 (1%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYV+A +++A+ A LA+I + L+ ANAAA+ PTT + AAGADEVSAAVA+LFS HA+ Sbjct 1 MSYVVAASDLLASTATELARIDAALNTANAAAVLPTTVLQAAGADEVSAAVAALFSSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQ----QALNVINAPTQTLLGRP 116 AYQ L QA FH+ F Q LS A +Y SAEAAN SPLQ L ++NAPTQ LLGRP Sbjct 61 AYQALSVQAGQFHQWFTQTLSGAGLSYASAEAANVSPLQVLERDVLGLVNAPTQALLGRP 120 Query 117 LIGNGTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGA 176 +IGNG +GAPG+G G GG+L GNGG GGSG GQ GGAGG+AGL+G GGTGG GGAGA Sbjct 121 IIGNGADGAPGSGANGADGGILIGNGGTGGSGAPGQNGGAGGNAGLLGSGGTGGVGGAGA 180 Query 177 VGGVGGNGGWLYGNGGAGGLGGTGVAGVNGGMGAAGGAGGNAYLFGSGGAGGQGGMGAAG 236 GG GG GG L+GNGG GG GGT +AGVNGG GG GGNA+LFG GG GGQGG G AG Sbjct 181 TGGTGGTGGLLWGNGGIGGQGGTAMAGVNGGSPGHGGNGGNAFLFGDGGTGGQGGTGLAG 240 Query 237 ADGVNPTP 244 ADGVNPTP Sbjct 241 ADGVNPTP 248 >gi|183982495|ref|YP_001850786.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175821|gb|ACC40931.1| PE-PGRS family protein [Mycobacterium marinum M] Length=681 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 123/188 (66%), Positives = 148/188 (79%), Gaps = 0/188 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+++A PEM+ AAA ++A IGST+SAA+A A APTT VLAA ADEVS A+A LFS HA+ Sbjct 1 MSFLIAAPEMLTAAAADIATIGSTISAADAIAAAPTTSVLAAAADEVSLAIAGLFSAHAK 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQ QAA FHE+ +++L+ +Y +AEAANASPL+ L+ +NAPTQTL GR LIGN Sbjct 61 QYQAFSVQAATFHEQLVRSLAAGGFSYATAEAANASPLEFLLDAVNAPTQTLFGRDLIGN 120 Query 121 GTNGAPGTGQAGGPGGLLYGNGGNGGSGGVGQAGGAGGSAGLIGIGGTGGAGGAGAVGGV 180 GT+GA GTG GG GGLL+GNGGNGGSG GQ GG+GG+AGLIG GGTGGAGG GA GG Sbjct 121 GTDGAAGTGANGGDGGLLWGNGGNGGSGATGQVGGSGGAAGLIGTGGTGGAGGTGAAGGN 180 Query 181 GGNGGWLY 188 GG GGWL+ Sbjct 181 GGAGGWLF 188 >gi|57116865|ref|YP_177812.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|7441217|pir||E70917 hypothetical glycine-rich protein Rv1450c - Mycobacterium tuberculosis (strain H37RV) gi|38490271|emb|CAE55390.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] Length=1329 Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|289552831|ref|ZP_06442041.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] gi|289437463|gb|EFD19956.1| LOW QUALITY PROTEIN: predicted protein [Mycobacterium tuberculosis KZN 605] Length=998 Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 74/126 (59%), Positives = 90/126 (72%), Gaps = 3/126 (2%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V+ATPEM+ AA +LA+IGST++AAN AA A VL A ADEVS AVA+LF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQT+ Q A FH+RF+Q LS A +Y +AEA N Q L +NAPTQ L GRPLIGN Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117 Query 121 GTNGAP 126 G +G+P Sbjct 118 GADGSP 123 >gi|15840909|ref|NP_335946.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|13881112|gb|AAK45760.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] Length=1408 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 2 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 61 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 62 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 121 Query 117 LI 118 LI Sbjct 122 LI 123 >gi|148822669|ref|YP_001287423.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148721196|gb|ABR05821.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|344219280|gb|AEM99910.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1407 Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|253797511|ref|YP_003030512.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|253319014|gb|ACT23617.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|328457295|gb|AEB02718.1| hypothetical protein TBSG_00589 [Mycobacterium tuberculosis KZN 4207] gi|344218399|gb|AEM99029.1| PE-PGRS family protein [Mycobacterium tuberculosis CTRI-2] Length=1303 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 74/126 (59%), Positives = 90/126 (72%), Gaps = 3/126 (2%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V+ATPEM+ AA +LA+IGST++AAN AA A VL A ADEVS AVA+LF HAQ Sbjct 1 MSFVIATPEMLTTAATDLAKIGSTITAANTAAAA-VAKVLPASADEVSVAVAALFGTHAQ 59 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQT+ Q A FH+RF+Q LS A +Y +AEA N Q L +NAPTQ L GRPLIGN Sbjct 60 EYQTVSAQVATFHDRFVQTLSATASSYVAAEAVNVE--QSLLAAVNAPTQALFGRPLIGN 117 Query 121 GTNGAP 126 G +G+P Sbjct 118 GADGSP 123 >gi|148661242|ref|YP_001282765.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148505394|gb|ABQ73203.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=1398 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 77/122 (64%), Positives = 91/122 (75%), Gaps = 4/122 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS V+ PE VAAAA ++A+IGS++ AANAAA TT VLAAGADEVSAA+A+LF HA+ Sbjct 1 MSLVIVAPETVAAAALDVARIGSSIGAANAAAAGSTTSVLAAGADEVSAAIATLFGSHAR 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 YQ + TQ AAFH+RF Q LS A G+Y SAEA NA+PL LN +NAPTQ LLGRP Sbjct 61 EYQAISTQVAAFHDRFAQTLSAAVGSYVSAEATNAAPLATLEHNVLNALNAPTQALLGRP 120 Query 117 LI 118 LI Sbjct 121 LI 122 >gi|294994403|ref|ZP_06800094.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=710 Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 73/121 (61%), Positives = 94/121 (78%), Gaps = 0/121 (0%) Query 4 VLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQAYQ 63 ++ATPEM+A AA +LA+IGS +SAA+A A PTT V+AAGADEVSA +A+LFS HAQ YQ Sbjct 1 MIATPEMMATAAFDLARIGSQVSAASAVAAMPTTEVVAAGADEVSAGIAALFSAHAQEYQ 60 Query 64 TLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGNGTN 123 L QAAAFH++F+ L+ AA Y + E ANA+ ++ L +NAPTQTLLGRPLIG+G + Sbjct 61 ALSAQAAAFHDQFVHTLTAAARWYTATEIANAAAMRVVLGAVNAPTQTLLGRPLIGDGAH 120 Query 124 G 124 G Sbjct 121 G 121 >gi|183982505|ref|YP_001850796.1| PE-PGRS family protein, PE_PGRS15_1 [Mycobacterium marinum M] gi|183175831|gb|ACC40941.1| PE-PGRS family protein, PE_PGRS15_1 [Mycobacterium marinum M] Length=620 Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 79/124 (64%), Positives = 100/124 (81%), Gaps = 0/124 (0%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V+ PE+++AAA +LA IGST+SAANAAA A TT V AA ADEVS AVA+LF HAQ Sbjct 1 MSFVITAPELISAAATDLAGIGSTISAANAAASASTTAVAAAAADEVSTAVATLFGAHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQ+LG+Q AAFH+ F++ L++ + Y +AEA NASPLQ L++INAPTQ +LGRPLIGN Sbjct 61 QYQSLGSQMAAFHDDFVRILASGSNLYATAEATNASPLQPLLDLINAPTQAILGRPLIGN 120 Query 121 GTNG 124 G+NG Sbjct 121 GSNG 124 >gi|183982114|ref|YP_001850405.1| PE-PGRS family protein [Mycobacterium marinum M] gi|183175440|gb|ACC40550.1| PE-PGRS family protein [Mycobacterium marinum M] Length=1397 Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 72/123 (59%), Positives = 91/123 (74%), Gaps = 2/123 (1%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MS+V TPEMV AAA++L+ I S ++ AN+ A A TT VL A ADEVSAA+A+LF HAQ Sbjct 1 MSFVSVTPEMVVAAASDLSGINSAIAQANSVAAAATTTVLPAAADEVSAAIAALFGTHAQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPLQQALNVINAPTQTLLGRPLIGN 120 YQ + + AAFH+RF+Q+L+T AG+Y AEAANA Q L ++NAPTQ L GRPLIG+ Sbjct 61 QYQAISAELAAFHDRFVQSLNTGAGSYLRAEAANAE--QGLLGLVNAPTQALFGRPLIGD 118 Query 121 GTN 123 G N Sbjct 119 GAN 121 >gi|118616393|ref|YP_904725.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] gi|118568503|gb|ABL03254.1| PE-PGRS family protein [Mycobacterium ulcerans Agy99] Length=889 Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 81/127 (64%), Positives = 102/127 (81%), Gaps = 4/127 (3%) Query 1 MSYVLATPEMVAAAANNLAQIGSTLSAANAAALAPTTGVLAAGADEVSAAVASLFSGHAQ 60 MSYV+A P+M+A+AA ++A IGS++ AAN AA+ TTGV+AA DEVS A+A+LFSGH Q Sbjct 1 MSYVVAIPDMLASAAADVAGIGSSVGAANTAAVGATTGVMAAADDEVSVAIAALFSGHGQ 60 Query 61 AYQTLGTQAAAFHERFIQALSTAAGAYGSAEAANASPL----QQALNVINAPTQTLLGRP 116 AYQ + QAAAFH++F++AL+ A GAY +AEAANASPL Q+ L VINAPT LLGRP Sbjct 61 AYQAISAQAAAFHDQFLRALTGAGGAYAAAEAANASPLQAAEQEVLAVINAPTNALLGRP 120 Query 117 LIGNGTN 123 LIGNGT+ Sbjct 121 LIGNGTD 127 Lambda K H 0.305 0.137 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 1378320521600 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40