BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0878c Length=443 Score E Sequences producing significant alignments: (Bits) Value gi|15840292|ref|NP_335329.1| PPE family protein [Mycobacterium t... 849 0.0 gi|57116794|ref|YP_177764.1| PPE family protein [Mycobacterium t... 849 0.0 gi|339630943|ref|YP_004722585.1| PPE family protein [Mycobacteri... 846 0.0 gi|31792066|ref|NP_854559.1| PPE family protein [Mycobacterium b... 840 0.0 gi|323720587|gb|EGB29665.1| PPE family protein [Mycobacterium tu... 840 0.0 gi|326904903|gb|EGE51836.1| PPE family protein [Mycobacterium tu... 838 0.0 gi|308397492|ref|ZP_07492512.2| PPE family protein [Mycobacteriu... 838 0.0 gi|289573504|ref|ZP_06453731.1| PPE family protein [Mycobacteriu... 838 0.0 gi|148660655|ref|YP_001282178.1| PPE family protein [Mycobacteri... 837 0.0 gi|289446443|ref|ZP_06436187.1| PPE family protein [Mycobacteriu... 837 0.0 gi|289761008|ref|ZP_06520386.1| PPE family protein [Mycobacteriu... 837 0.0 gi|289442288|ref|ZP_06432032.1| PPE family protein [Mycobacteriu... 837 0.0 gi|308370137|ref|ZP_07420419.2| PPE family protein [Mycobacteriu... 837 0.0 gi|289749400|ref|ZP_06508778.1| LOW QUALITY PROTEIN: PPE family ... 836 0.0 gi|306796651|ref|ZP_07434953.1| PPE family protein [Mycobacteriu... 833 0.0 gi|298524370|ref|ZP_07011779.1| PPE family protein [Mycobacteriu... 798 0.0 gi|253800100|ref|YP_003033101.1| PPE family protein [Mycobacteri... 790 0.0 gi|121636801|ref|YP_977024.1| PPE family protein [Mycobacterium ... 759 0.0 gi|308370523|ref|ZP_07421870.2| PPE family protein [Mycobacteriu... 759 0.0 gi|339297531|gb|AEJ49641.1| PPE family protein [Mycobacterium tu... 752 0.0 gi|339293890|gb|AEJ46001.1| PPE family protein [Mycobacterium tu... 746 0.0 gi|340625890|ref|YP_004744342.1| ppe family protein [Mycobacteri... 626 3e-177 gi|306787912|ref|ZP_07426234.1| hypothetical protein TMDG_02648 ... 580 2e-163 gi|289752933|ref|ZP_06512311.1| PPE family protein [Mycobacteriu... 507 2e-141 gi|308371787|ref|ZP_07426236.2| putative PPE family protein [Myc... 420 3e-115 gi|118616724|ref|YP_905056.1| PPE family protein [Mycobacterium ... 324 2e-86 gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacteri... 323 4e-86 gi|183984289|ref|YP_001852580.1| PPE family protein [Mycobacteri... 313 3e-83 gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacteri... 306 3e-81 gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ... 305 7e-81 gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacteri... 298 1e-78 gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacteri... 296 5e-78 gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium t... 293 4e-77 gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacteri... 292 7e-77 gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium t... 292 8e-77 gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacteriu... 291 2e-76 gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacteriu... 291 2e-76 gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium ... 290 3e-76 gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tu... 290 3e-76 gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacteri... 290 3e-76 gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacteriu... 290 3e-76 gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacteriu... 290 3e-76 gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium t... 288 9e-76 gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacteriu... 288 1e-75 gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacteriu... 288 1e-75 gi|148822348|ref|YP_001287102.1| PPE family protein [Mycobacteri... 288 1e-75 gi|289573789|ref|ZP_06454016.1| PPE family protein [Mycobacteriu... 288 1e-75 gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacteriu... 288 1e-75 gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacteriu... 288 1e-75 gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacteri... 288 2e-75 >gi|15840292|ref|NP_335329.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13880453|gb|AAK45143.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=444 Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/443 (100%), Positives = 443/443 (100%), Gaps = 0/443 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKKVGNSG 443 IRVIISRVSSTGAPPQKKVGNSG Sbjct 422 IRVIISRVSSTGAPPQKKVGNSG 444 >gi|57116794|ref|YP_177764.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|254363809|ref|ZP_04979855.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|289744608|ref|ZP_06503986.1| PPE family protein [Mycobacterium tuberculosis 02_1987] 8 more sequence titles Length=443 Score = 849 bits (2193), Expect = 0.0, Method: Compositional matrix adjust. Identities = 443/443 (100%), Positives = 443/443 (100%), Gaps = 0/443 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKKVGNSG 443 IRVIISRVSSTGAPPQKKVGNSG Sbjct 421 IRVIISRVSSTGAPPQKKVGNSG 443 >gi|339630943|ref|YP_004722585.1| PPE family protein [Mycobacterium africanum GM041182] gi|339330299|emb|CCC25959.1| PPE family protein [Mycobacterium africanum GM041182] Length=443 Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/443 (99%), Positives = 442/443 (99%), Gaps = 0/443 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKKVGNSG 443 IRVIISRVSSTGAPP KKVGNSG Sbjct 421 IRVIISRVSSTGAPPPKKVGNSG 443 >gi|31792066|ref|NP_854559.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|254231186|ref|ZP_04924513.1| PPE family protein [Mycobacterium tuberculosis C] gi|254549855|ref|ZP_05140302.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|31617653|emb|CAD93763.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97] gi|124600245|gb|EAY59255.1| PPE family protein [Mycobacterium tuberculosis C] Length=438 Score = 840 bits (2171), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/438 (100%), Positives = 438/438 (100%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPPQKK Sbjct 421 IRVIISRVSSTGAPPQKK 438 >gi|323720587|gb|EGB29665.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=439 Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 438/438 (100%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+KK Sbjct 422 IRVIISRVSSTGAPPKKK 439 >gi|326904903|gb|EGE51836.1| PPE family protein [Mycobacterium tuberculosis W-148] Length=449 Score = 838 bits (2165), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP KK Sbjct 422 IRVIISRVSSTGAPPPKK 439 >gi|308397492|ref|ZP_07492512.2| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308366815|gb|EFP55666.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=449 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP KK Sbjct 422 IRVIISRVSSTGAPPPKK 439 >gi|289573504|ref|ZP_06453731.1| PPE family protein [Mycobacterium tuberculosis K85] gi|308231659|ref|ZP_07413340.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308376534|ref|ZP_07439206.2| PPE family protein [Mycobacterium tuberculosis SUMu008] 9 more sequence titles Length=448 Score = 838 bits (2164), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+K Sbjct 422 IRVIISRVSSTGAPPKKS 439 >gi|148660655|ref|YP_001282178.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148822086|ref|YP_001286840.1| PPE family protein [Mycobacterium tuberculosis F11] gi|167968355|ref|ZP_02550632.1| PPE family protein [Mycobacterium tuberculosis H37Ra] 8 more sequence titles Length=448 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP KK Sbjct 421 IRVIISRVSSTGAPPPKK 438 >gi|289446443|ref|ZP_06436187.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] gi|289419401|gb|EFD16602.1| PPE family protein [Mycobacterium tuberculosis CPHL_A] Length=438 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP KK Sbjct 421 IRVIISRVSSTGAPPPKK 438 >gi|289761008|ref|ZP_06520386.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|289708514|gb|EFD72530.1| PPE family protein [Mycobacterium tuberculosis GM 1503] Length=447 Score = 837 bits (2163), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+K Sbjct 421 IRVIISRVSSTGAPPKKS 438 >gi|289442288|ref|ZP_06432032.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289415207|gb|EFD12447.1| PPE family protein [Mycobacterium tuberculosis T46] Length=448 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAA+AVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAASAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+K Sbjct 422 IRVIISRVSSTGAPPKKS 439 >gi|308370137|ref|ZP_07420419.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308372959|ref|ZP_07430555.2| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308325228|gb|EFP14079.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308339176|gb|EFP28027.1| PPE family protein [Mycobacterium tuberculosis SUMu005] Length=448 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/438 (99%), Positives = 436/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTA PAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAVPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+K Sbjct 422 IRVIISRVSSTGAPPKKS 439 >gi|289749400|ref|ZP_06508778.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis T92] gi|289689987|gb|EFD57416.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis T92] Length=443 Score = 836 bits (2160), Expect = 0.0, Method: Compositional matrix adjust. Identities = 435/438 (99%), Positives = 437/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAA+AVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAASAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAPP+K Sbjct 421 IRVIISRVSSTGAPPKKS 438 >gi|306796651|ref|ZP_07434953.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308342910|gb|EFP31761.1| PPE family protein [Mycobacterium tuberculosis SUMu006] Length=446 Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 434/438 (99%), Positives = 436/438 (99%), Gaps = 0/438 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKK 438 IRVIISRVSSTGAP + + Sbjct 421 IRVIISRVSSTGAPQKSR 438 >gi|298524370|ref|ZP_07011779.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] gi|298494164|gb|EFI29458.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A] Length=451 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/419 (99%), Positives = 418/419 (99%), Gaps = 0/419 (0%) Query 20 GPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWL 79 GPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWL Sbjct 23 GPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWL 82 Query 80 NAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAAT 139 NAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAAT Sbjct 83 NAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAAT 142 Query 140 EASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIP 199 EASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIP Sbjct 143 EASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIP 202 Query 200 ALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGF 259 ALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGF Sbjct 203 ALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGF 262 Query 260 FNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGD 319 FNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGD Sbjct 263 FNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGD 322 Query 320 LNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQN 379 LNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQN Sbjct 323 LNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQN 382 Query 380 AGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPPQKK 438 AGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPP KK Sbjct 383 AGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPPPKK 441 >gi|253800100|ref|YP_003033101.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|253321603|gb|ACT26206.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] Length=425 Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust. Identities = 414/415 (99%), Positives = 414/415 (99%), Gaps = 0/415 (0%) Query 24 MLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWLNAAT 83 MLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWLNAAT Sbjct 1 MLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAWQGPAAAAMAAAAAPYLSWLNAAT 60 Query 84 ARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAATEASY 143 ARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAATEASY Sbjct 61 ARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQLLSLVLSNLFGQNLPAIAATEASY 120 Query 144 EQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIPALGV 203 EQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIPALGV Sbjct 121 EQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAALAIPALGV 180 Query 204 ENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFG 263 ENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFG Sbjct 181 ENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFG 240 Query 264 NGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTG 323 NGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTG Sbjct 241 NGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTG 300 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTA 383 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTA Sbjct 301 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTA 360 Query 384 LTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPPQKK 438 LTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPP KK Sbjct 361 LTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPPPKK 415 >gi|121636801|ref|YP_977024.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989272|ref|YP_002643959.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492448|emb|CAL70916.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772385|dbj|BAH25191.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600817|emb|CCC63488.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=442 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/443 (99%), Positives = 442/443 (99%), Gaps = 1/443 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 Query 421 IRVIISRVSSTGAPPQKKVGNSG 443 IRVIISRVSSTGAPP KKVGNSG Sbjct 421 IRVIISRVSSTGAPP-KKVGNSG 442 >gi|308370523|ref|ZP_07421870.2| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308331648|gb|EFP20499.1| PPE family protein [Mycobacterium tuberculosis SUMu003] Length=443 Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/443 (99%), Positives = 442/443 (99%), Gaps = 1/443 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGAPPQKKVGNSG 443 IRVIISRVSSTGAPP KKVGNSG Sbjct 422 IRVIISRVSSTGAPP-KKVGNSG 443 >gi|339297531|gb|AEJ49641.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=442 Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust. Identities = 438/441 (99%), Positives = 438/441 (99%), Gaps = 3/441 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGA---PPQKK 438 IRVIISRVSSTGA PPQKK Sbjct 422 IRVIISRVSSTGAPPPPPQKK 442 >gi|339293890|gb|AEJ46001.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=447 Score = 746 bits (1927), Expect = 0.0, Method: Compositional matrix adjust. Identities = 442/446 (99%), Positives = 443/446 (99%), Gaps = 3/446 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 301 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 302 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 361 Query 361 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 420 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS Sbjct 362 GNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECS 421 Query 421 IRVIISRVSSTGA---PPQKKVGNSG 443 IRVIISRVSSTGA PP+KKVGNSG Sbjct 422 IRVIISRVSSTGAPPPPPKKKVGNSG 447 >gi|340625890|ref|YP_004744342.1| ppe family protein [Mycobacterium canettii CIPT 140010059] gi|340004080|emb|CCC43217.1| ppe family protein [Mycobacterium canettii CIPT 140010059] Length=428 Score = 626 bits (1614), Expect = 3e-177, Method: Compositional matrix adjust. Identities = 375/384 (98%), Positives = 375/384 (98%), Gaps = 4/384 (1%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPML AVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 1 MNFMVLPPEVNSARIYAGAGPAPMLTPAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAA AAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 61 QGPAAAA----AAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 116 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHG ASTVASQLTPWQQLLSVLPP Sbjct 117 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGEASTVASQLTPWQQLLSVLPP 176 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 177 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 236 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGN GDD Sbjct 237 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNDGDD 296 Query 301 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 360 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL Sbjct 297 NTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNL 356 Query 361 GNGSSGFGNASDTSSGFQNAGTAL 384 GNGSSGFGNASDTSSGFQNAGTA Sbjct 357 GNGSSGFGNASDTSSGFQNAGTAF 380 >gi|306787912|ref|ZP_07426234.1| hypothetical protein TMDG_02648 [Mycobacterium tuberculosis SUMu004] gi|308335459|gb|EFP24310.1| hypothetical protein TMDG_02648 [Mycobacterium tuberculosis SUMu004] Length=316 Score = 580 bits (1495), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 300/303 (99%), Positives = 301/303 (99%), Gaps = 0/303 (0%) Query 136 IAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAAPAGAVGVPAA 195 IAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTA PAGAVGVPAA Sbjct 5 IAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPPVVTAVPAGAVGVPAA 64 Query 196 LAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSG 255 LAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSG Sbjct 65 LAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSG 124 Query 256 NAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGF 315 NAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGF Sbjct 125 NAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGF 184 Query 316 NSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSS 375 NSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSS Sbjct 185 NSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSS 244 Query 376 GFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPP 435 GFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPP Sbjct 245 GFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRATTARECSIRVIISRVSSTGAPP 304 Query 436 QKK 438 +K Sbjct 305 KKS 307 >gi|289752933|ref|ZP_06512311.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289693520|gb|EFD60949.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=270 Score = 507 bits (1305), Expect = 2e-141, Method: Compositional matrix adjust. Identities = 268/270 (99%), Positives = 269/270 (99%), Gaps = 0/270 (0%) Query 174 LLSVLPPVVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFG 233 +LSVLPPVVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFG Sbjct 1 MLSVLPPVVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFG 60 Query 234 IGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLG 293 IGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLG Sbjct 61 IGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLG 120 Query 294 FGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNS 353 FGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNS Sbjct 121 FGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNS 180 Query 354 GSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRA 413 GSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRA Sbjct 181 GSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRASSTWADSPRAWPIRAPSRLQVWRTRA 240 Query 414 TTARECSIRVIISRVSSTGAPPQKKVGNSG 443 TTARECSIRVIISRVSSTGAPP KKVGNSG Sbjct 241 TTARECSIRVIISRVSSTGAPPPKKVGNSG 270 >gi|308371787|ref|ZP_07426236.2| putative PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308335369|gb|EFP24220.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004] Length=282 Score = 420 bits (1079), Expect = 3e-115, Method: Compositional matrix adjust. Identities = 264/265 (99%), Positives = 264/265 (99%), Gaps = 0/265 (0%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW Sbjct 2 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 61 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL Sbjct 62 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 121 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP Sbjct 122 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 VVTA PAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA Sbjct 182 VVTAVPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 241 Query 241 NLGNGNIGNANLGSGNAGFFNFGNG 265 NLGNGNIGNANLGSGNAGFFNFGNG Sbjct 242 NLGNGNIGNANLGSGNAGFFNFGNG 266 Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust. Identities = 35/85 (42%), Positives = 45/85 (53%), Gaps = 19/85 (22%) Query 282 IGSGNEGSGN-LGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNT 340 +G N G GN LG GN G++N G GN+GD N G N G+ N G G N G N Sbjct 202 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNG--------NIGNANL 253 Query 341 GTGHSGFFNSGNSGSGFQNLGNGSS 365 G+G++GFFN GNG++ Sbjct 254 GSGNAGFFN----------FGNGTT 268 >gi|118616724|ref|YP_905056.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568834|gb|ABL03585.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=621 Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 237/427 (56%), Positives = 279/427 (66%), Gaps = 51/427 (11%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFM+LPPEVNSA ++ GAG AP LAAA AWDGL AELG AA +FS + SGL +G +W Sbjct 1 MNFMMLPPEVNSALMFTGAGSAPTLAAATAWDGLVAELGEAAEAFSSVTSGLASG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPY WL+AA RA GAA AKAAAAV+E+A+AAT HP LV ANRNQL Sbjct 58 QGPAAAAMAAAAAPYAGWLSAAATRALGAATQAKAAAAVFESAQAATVHPELVLANRNQL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATE++YE+LWAQDVAA VGYHGGAS VA+QL PWQQ + LP Sbjct 118 VSLVLSNLFGQNAPAIAATESTYEELWAQDVAATVGYHGGASAVAAQLAPWQQAIQALPG 177 Query 181 VVTAAPAGAVGVPAALAIPALG-----VENIGVGNFLGIGNIGNNNVGSGNTG------- 228 V A AA A+ + + N G GNFL IGNIGNNN+GSGNTG Sbjct 178 RVAAMATTGPAASAAAALASGPAAALDIGNNGSGNFLSIGNIGNNNLGSGNTGSANLGGG 237 Query 229 ---------------------------------DYNFGIGNIGNANLGNGN-IGNANLGS 254 D NFG GN GN NLG+GN G+ N+G Sbjct 238 NIGNGNLGSGNTGNVNLGNGNNGFFNFGNGNLGDTNFGSGNSGNLNLGSGNRFGSGNIGF 297 Query 255 GNA-GFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTG 313 GN G NFG+GN G+ NFG+GN G NIGSGN G N+GFGN G +N G+GN+G N G Sbjct 298 GNRFGDGNFGSGNAGSYNFGTGNNGSFNIGSGNNGDSNIGFGNLGTNNLGFGNNGSNNIG 357 Query 314 GFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDT 373 SG GIG + G+ N GFGN G + GFFNSG++ GF N G+G+ GF +A T Sbjct 358 FGLSGSNQIGIGG-LNAGIGNMGFGNAGDNNVGFFNSGSNNIGFFNSGDGNFGFAHAGST 416 Query 374 SSGFQNA 380 ++GF N+ Sbjct 417 NTGFWNS 423 Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 110/243 (46%), Positives = 131/243 (54%), Gaps = 62/243 (25%) Query 202 GVENIGVGNF----LGIGNIGNNNVGSGNTGD-------YNFGIGNIGNANLGNGNIGNA 250 G NIG GN LG GN G+NN+G G +G N GIGN+G N G+ N+G Sbjct 332 GDSNIGFGNLGTNNLGFGNNGSNNIGFGLSGSNQIGIGGLNAGIGNMGFGNAGDNNVGFF 391 Query 251 NLGSGNAGFFNFGNGNDG-------NT------------------NFGSGNAGFLNIGSG 285 N GS N GFFN G+GN G NT NFG GN G N+G G Sbjct 392 NSGSNNIGFFNSGDGNFGFAHAGSTNTGFWNSGGTNTGFGNGGSLNFGFGNGGVENMGHG 451 Query 286 NEGSG--------------------NLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIG 325 N GS N GF NA + NTGW NSG+ NTGG+NSG LNTGIG Sbjct 452 NAGSFNMGFGNGGGGNTGFYNSGTYNTGFSNAAETNTGWENSGNVNTGGYNSGGLNTGIG 511 Query 326 SPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLG-----NGSSGFGNASD-TSSGFQN 379 SP TQ NSGFG++G+G+SGFFNSG+ SGF+N NG SG N+ D T+ GF N Sbjct 512 SPDTQAGPNSGFGHSGSGNSGFFNSGDGNSGFENSNTCVSANGHSGVRNSGDATNVGFSN 571 Query 380 AGT 382 +G+ Sbjct 572 SGS 574 >gi|183981484|ref|YP_001849775.1| PPE family protein [Mycobacterium marinum M] gi|183174810|gb|ACC39920.1| PPE family protein [Mycobacterium marinum M] Length=627 Score = 323 bits (828), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 232/423 (55%), Positives = 281/423 (67%), Gaps = 30/423 (7%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F++LPPE+NS R++AGAG APML AAVAW GLA ELG AA SF + SGL G W Sbjct 2 MSFLLLPPEINSVRMFAGAGAAPMLDAAVAWGGLAEELGTAARSFESVTSGL---AGQVW 58 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG AAAAMAAAAAPY WL+AA ARA GA+A A+A A V+EAAR+A HP VAANRN Sbjct 59 QGAAAAAMAAAAAPYTGWLSAAAARAVGASAQARAVAEVFEAARSAMVHPVAVAANRNVF 118 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPW----QQLLS 176 + LV+SNLFGQN PAIAATE +YEQ+WA DVAAMVGYHGGAS A+ L W QQ +S Sbjct 119 VQLVMSNLFGQNAPAIAATEGAYEQMWAADVAAMVGYHGGASAAAAALPSWEAGLQQWIS 178 Query 177 VLPPVVTAAPAGAVGVPAA-LAIPALGVENIGVGNF----LGIGNIGNNNVGSGNTGDYN 231 LP V A A +PA L + +G N+G GN LG GNIGN N+GSGNTG N Sbjct 179 GLPG-VGQLQAAASAIPAFNLGLGNIGDFNLGNGNTGDNNLGSGNIGNLNLGSGNTGGSN 237 Query 232 FGIGNIGNANLGNGNIGNANLGSGNA----------------GFFNFGNGNDGNTNFGSG 275 G GN G+ NLG+GN GN+NLGSGN G NFGNGN G++N GSG Sbjct 238 VGSGNYGDGNLGSGNYGNSNLGSGNGVLSSVGSDSNVGSGNLGSHNFGNGNTGSSNIGSG 297 Query 276 NAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANS 335 N G N G N GS N GF N GD N G+ N+G+ N G +GD GIG+ + G+AN+ Sbjct 298 NIGDTNRGFANLGSNNFGFANLGDGNVGFANTGNNNIGFGLTGDNQMGIGA-LNTGLANT 356 Query 336 GFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRASSTWADSP 395 GFGN+G+ + GFFNSG+ GF N GNG+ GF N+ DT++GF+N+G+ T + A + Sbjct 357 GFGNSGSNNIGFFNSGDHNVGFFNSGNGNYGFLNSGDTNTGFENSGSVNTGVQNAGAANF 416 Query 396 RAW 398 AW Sbjct 417 GAW 419 Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 109/264 (42%), Positives = 119/264 (46%), Gaps = 72/264 (27%) Query 194 AALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIG-------NIGNANLGNGN 246 A L G N+G GN +G N GNNN+G G TGD GIG N G N G+ N Sbjct 307 ANLGSNNFGFANLGDGN-VGFANTGNNNIGFGLTGDNQMGIGALNTGLANTGFGNSGSNN 365 Query 247 IGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLG---FG-------- 295 IG N G N GFFN GNGN G N G N GF N GS N G N G FG Sbjct 366 IGFFNSGDHNVGFFNSGNGNYGFLNSGDTNTGFENSGSVNTGVQNAGAANFGAWNAGGGN 425 Query 296 ----------------------------------NAGDDNTGWGNSGDTNTGGFNSGDLN 321 N+G NTGWGNSGD NTG FNSG+LN Sbjct 426 FGFGNGGGGNFGFGNSGLSNTGSFNAGDVNTGDFNSGSTNTGWGNSGDINTGLFNSGNLN 485 Query 322 TGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-------------------LGN 362 T I S TQ NSGFGNTGTG SGF NSG SG QN Sbjct 486 TSIASSATQAGPNSGFGNTGTGLSGFNNSGVDTSGIQNAQYETTKTLPPPAPPIPIHFNQ 545 Query 363 GSSGFGNASDTSSGFQNAGTALTR 386 G+SGF N ++G N+G L R Sbjct 546 GTSGFFNMGPGTAGIGNSGGGLNR 569 >gi|183984289|ref|YP_001852580.1| PPE family protein [Mycobacterium marinum M] gi|183177615|gb|ACC42725.1| PPE family protein [Mycobacterium marinum M] Length=621 Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 243/427 (57%), Positives = 283/427 (67%), Gaps = 51/427 (11%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFM+LPPEVNSA ++ GAG AP LAAA AWDGLAAELG AA +FS + SGL +G +W Sbjct 1 MNFMMLPPEVNSALMFTGAGSAPTLAAATAWDGLAAELGEAAEAFSSVTSGLASG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPY WL+AA RA GAA AKAAAAV+E+A+AAT HP LV ANRNQL Sbjct 58 QGPAAAAMAAAAAPYAGWLSAAATRALGAATQAKAAAAVFESAQAATVHPELVLANRNQL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATE++YE+LWAQDVAAMVGYHGGAS VA+QL PWQQ + LP Sbjct 118 VSLVLSNLFGQNAPAIAATESTYEELWAQDVAAMVGYHGGASAVAAQLAPWQQAIQALPG 177 Query 181 VVTA-----APAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTG------- 228 V A A A A+ ALG+ N G GNFL IGNIGNNN+GSGNTG Sbjct 178 RVAAMATTGPAASAAAALASGPAAALGIGNNGSGNFLSIGNIGNNNLGSGNTGSANLGGG 237 Query 229 ---------------------------------DYNFGIGNIGNANLGNGN-IGNANLGS 254 D NFG GN GN NLG+GN G+ N+G Sbjct 238 NIGNGNLGSGNTGNVNLGNGNNGFFNFGNGNLGDTNFGSGNSGNLNLGSGNRFGSGNIGF 297 Query 255 GNA-GFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTG 313 GN G NFG+GN G+ NFG+GN G NIGSGN G N+GFGN G +N G+GN+G N G Sbjct 298 GNRFGDGNFGSGNAGSYNFGTGNNGSFNIGSGNNGDSNIGFGNFGTNNLGFGNNGSNNIG 357 Query 314 GFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDT 373 SG GIG + G+ N GFGN G + GFFNSG++ GF N G+G+ GF NA T Sbjct 358 FGLSGSNQIGIGG-LNAGIGNMGFGNAGDNNVGFFNSGSNNIGFFNSGDGNFGFANAGST 416 Query 374 SSGFQNA 380 ++GF N+ Sbjct 417 NTGFWNS 423 Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 114/246 (47%), Positives = 134/246 (55%), Gaps = 62/246 (25%) Query 202 GVENIGVGNF----LGIGNIGNNNVGSGNTGD-------YNFGIGNIGNANLGNGNIGNA 250 G NIG GNF LG GN G+NN+G G +G N GIGN+G N G+ N+G Sbjct 332 GDSNIGFGNFGTNNLGFGNNGSNNIGFGLSGSNQIGIGGLNAGIGNMGFGNAGDNNVGFF 391 Query 251 NLGSGNAGFFNFGNGNDG-------NT------------------NFGSGNAGFLNIGSG 285 N GS N GFFN G+GN G NT NFG GN G N+G G Sbjct 392 NSGSNNIGFFNSGDGNFGFANAGSTNTGFWNSGGTNTGFGNGGSLNFGFGNGGVENMGHG 451 Query 286 NEGSG--------------------NLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIG 325 N GS N GF NAG+ NTGW NSG+ NTGG+NSG LNTGIG Sbjct 452 NAGSFNMGFGNGGGGNTGFYNSGTYNTGFSNAGETNTGWENSGNVNTGGYNSGGLNTGIG 511 Query 326 SPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLG-----NGSSGFGNASD-TSSGFQN 379 SP TQ NSGFG++G+G+SGFFNSG+ SGFQN NG SG N+ D T+ GF N Sbjct 512 SPDTQAGPNSGFGHSGSGNSGFFNSGDGNSGFQNSNTGVSANGHSGVRNSGDATNVGFSN 571 Query 380 AGTALT 385 +G+ T Sbjct 572 SGSNNT 577 >gi|183981160|ref|YP_001849451.1| PPE family protein [Mycobacterium marinum M] gi|183174486|gb|ACC39596.1| PPE family protein [Mycobacterium marinum M] Length=608 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 235/431 (55%), Positives = 269/431 (63%), Gaps = 65/431 (15%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF +LPPE+NSAR++AGAG PML+AA+AWDGLA ELG AA SF + SGL GS+W Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLV---GSSW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG AAAAM+AAAAPY+SWLNAA RA AA AK + +EAARAA HP VAANRN L Sbjct 58 QGAAAAAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNAL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 + LVL+NLFGQN PAIAA E SYEQ+WA DVAAM+GYHGGAS AS L WQQ L L Sbjct 118 VQLVLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAG 177 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 PAA IP L + NIGVGN L IGNIG+ N+G GN G+ N G GN GNA Sbjct 178 ------------PAASVIPGLSIGNIGVGN-LSIGNIGDFNLGGGNAGNLNLGGGNTGNA 224 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGN-EGSGNLGFGN-AG 298 NLG+GN G NLGSGN G NFGNGN GN N+GSGN G N+G GN G GN GFGN G Sbjct 225 NLGSGNNGFFNLGSGNTGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGFGNRVG 284 Query 299 DDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTG----------------- 341 D N G GN G+ N G N GD N G G+ G +N GFGN G Sbjct 285 DANLGSGNLGNANFGNGNLGDTNLGSGN---NGFSNVGFGNLGSNNLGFGNNGDNNIGFG 341 Query 342 -TGHS--------------------------GFFNSGNSGSGFQNLGNGSSGFGNASDTS 374 TG++ GFFNSG++ GF N G+G+ GF NA DT+ Sbjct 342 LTGNNQVGINFAGLNGGIGNIGLGNSGDNNVGFFNSGSNNVGFFNSGDGNFGFANAGDTN 401 Query 375 SGFQNAGTALT 385 +GF NAG T Sbjct 402 TGFWNAGRVNT 412 Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 102/284 (36%), Positives = 124/284 (44%), Gaps = 104/284 (36%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFF 260 LG N+G GNFLG GN G N GD N G GN+GNAN GNGN+G+ NLGSGN GF Sbjct 261 LGNANVGFGNFLGQGNFGFGN----RVGDANLGSGNLGNANFGNGNLGDTNLGSGNNGFS 316 Query 261 NFGNGNDGNTNFGSGNAGFLNIGSG----------------------------------N 286 N G GN G+ N G GN G NIG G N Sbjct 317 NVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIGNIGLGNSGDNNVGFFN 376 Query 287 EGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGS-------------------- 326 GS N+GF N+GD N G+ N+GDTNTG +N+G +NTG G+ Sbjct 377 SGSNNVGFFNSGDGNFGFANAGDTNTGFWNAGRVNTGFGNGGNFNLGFGNGGAANVGVGN 436 Query 327 ---------------------------------PVTQGVANSGFGNTGTGHSGFFNSG-- 351 G N+GF N+G+ ++G FN+G Sbjct 437 GGGGNMGFGNSGTENTGSFNSGGDNGPNGGNTGSFNSGYVNTGFFNSGSTNTGLFNAGSV 496 Query 352 NSG-----------SGFQNLGNGSSGFGNASDTSSGFQNAGTAL 384 N+G SGF N G G SGF N+ D +SGF N T Sbjct 497 NTGIGSPDTQPGSISGFGNTGAGVSGFNNSGDATSGFMNVATTF 540 Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 105/265 (40%), Positives = 128/265 (49%), Gaps = 82/265 (30%) Query 201 LGVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLG------------- 243 LG N+G GN +G GN+G+NN+G GN GD N G G GN +G Sbjct 303 LGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIGNI 362 Query 244 ------NGNIGNANLGSGNAGFFNFGNGN-----DGNTNFGSGNAGFLNIGSGNEGSGNL 292 + N+G N GS N GFFN G+GN G+TN G NAG +N G GN G+ NL Sbjct 363 GLGNSGDNNVGFFNSGSNNVGFFNSGDGNFGFANAGDTNTGFWNAGRVNTGFGNGGNFNL 422 Query 293 GFG----------------------------------------------NAGDDNTGWGN 306 GFG N+G NTG+ N Sbjct 423 GFGNGGAANVGVGNGGGGNMGFGNSGTENTGSFNSGGDNGPNGGNTGSFNSGYVNTGFFN 482 Query 307 SGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNG--- 363 SG TNTG FN+G +NTGIGSP TQ + SGFGNTG G SGF NSG++ SGF N+ Sbjct 483 SGSTNTGLFNAGSVNTGIGSPDTQPGSISGFGNTGAGVSGFNNSGDATSGFMNVATTFGF 542 Query 364 SSGFGNASDT-----SSGFQNAGTA 383 +SG N D ++GF NAG A Sbjct 543 TSGINNVGDYQVGLFNTGFGNAGIA 567 >gi|118616670|ref|YP_905002.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118568780|gb|ABL03531.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=608 Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 229/425 (54%), Positives = 268/425 (64%), Gaps = 53/425 (12%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF +LPPE+NSAR++AGAG PML+AA+AWDGLA ELG AA SF + SGL GS+W Sbjct 1 MNFPMLPPEINSARMFAGAGSGPMLSAAMAWDGLAVELGSAAESFGSVTSGLV---GSSW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG AA AM+AAAAPY+SWLNAA RA AA AK + +EAARAA HP VAANRN L Sbjct 58 QGAAATAMSAAAAPYVSWLNAAAVRAGEAALQAKEVVSAFEAARAAMIHPLAVAANRNAL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVL-- 178 + LVL+NLFGQN PAIAA E SYEQ+WA DVAAM+GYHGGAS AS L WQQ L L Sbjct 118 VQLVLTNLFGQNAPAIAAAEGSYEQMWAADVAAMLGYHGGASAAASGLASWQQALQGLAG 177 Query 179 --PPVVTAAPAGAVGVPAALAIPALGVENIGVGNF----LGIGNIGNNNVGSGNTGDYNF 232 V+ G GV L+I +GV N+G GN LG GN GN N+GSGN G +N Sbjct 178 PAASVILGLSIGNTGV-GNLSIGNIGVFNLGGGNAGNLNLGGGNTGNANLGSGNNGFFNL 236 Query 233 GIGNIGNANLGNGN--------------------------------IGNANLGSGNAGFF 260 G GN GN N GNGN +G+ANLGSGN G Sbjct 237 GSGNTGNTNFGNGNRGNLNWGSGNLGNANVGFGNFLGQGNFGFGNRVGDANLGSGNLGNA 296 Query 261 NFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDL 320 NFGNGN G+TN GSGN GF N+G GN GS NLGFGN GD+N G+G +G+ N G N L Sbjct 297 NFGNGNLGDTNLGSGNNGFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGN-NQVGINFAGL 355 Query 321 NTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNA 380 N GIG N GN+G + GFFNSG++ GF N G+ + GF N+ DT++GF NA Sbjct 356 NGGIG--------NIDLGNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNA 407 Query 381 GTALT 385 G T Sbjct 408 GRVNT 412 Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 107/254 (43%), Positives = 127/254 (50%), Gaps = 72/254 (28%) Query 202 GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGI------GNIGNANLGN---GNIG 248 G N+G GN LG GN G+NN+G G TG+ GI G IGN +LGN N+G Sbjct 314 GFSNVGFGNLGSNNLGFGNNGDNNIGFGLTGNNQVGINFAGLNGGIGNIDLGNSGDNNVG 373 Query 249 NANLGSGNAGFFN-----FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFG-------- 295 N GS N GFFN FG N G+TN G NAG +N G GN G+ NLGFG Sbjct 374 FFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNAGRVNTGFGNGGNFNLGFGNGGAANVG 433 Query 296 --------------------------------------NAGDDNTGWGNSGDTNTGGFNS 317 N+G NTG+ NSG TNTG FN+ Sbjct 434 VGNGGGGNLGFGNSGTENTGSFNSGGDNGRNGGNTGSFNSGYVNTGFFNSGSTNTGLFNA 493 Query 318 GDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNG---SSGFGNASDT- 373 G +NTGIGSP TQ + SGFGNTG G SGF NSG++ SGF N+ +SG N D Sbjct 494 GSVNTGIGSPDTQPGSISGFGNTGAGVSGFNNSGDATSGFMNVATTFGFASGINNVGDYQ 553 Query 374 ----SSGFQNAGTA 383 ++GF NAG A Sbjct 554 VGLFNTGFGNAGIA 567 Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust. Identities = 83/253 (33%), Positives = 103/253 (41%), Gaps = 70/253 (27%) Query 205 NIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGN 264 N G+GN + +GN G+NNVG N+G N G N G+ N G N G+ N G NAG N G Sbjct 356 NGGIGN-IDLGNSGDNNVGFFNSGSNNVGFFNSGDRNFGFANSGDTNTGFWNAGRVNTGF 414 Query 265 GNDGNTNFG----------------------------------------------SGNAG 278 GN GN N G S N+G Sbjct 415 GNGGNFNLGFGNGGAANVGVGNGGGGNLGFGNSGTENTGSFNSGGDNGRNGGNTGSFNSG 474 Query 279 FLNIGSGNEGSGNLGFGNAGDDNTGWGN------------------SGDTNTGGFNSGDL 320 ++N G N GS N G NAG NTG G+ SG N+G SG + Sbjct 475 YVNTGFFNSGSTNTGLFNAGSVNTGIGSPDTQPGSISGFGNTGAGVSGFNNSGDATSGFM 534 Query 321 NTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNA 380 N T G A SG N G G FN+G +G N GN + G N+ SSG N+ Sbjct 535 NV----ATTFGFA-SGINNVGDYQVGLFNTGFGNAGIANSGNATFGIANSGALSSGISNS 589 Query 381 GTALTRASSTWAD 393 GT + +T D Sbjct 590 GTNSSGGFNTGDD 602 >gi|340626569|ref|YP_004745021.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004759|emb|CCC43903.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=678 Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 224/451 (50%), Positives = 264/451 (59%), Gaps = 74/451 (16%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAA+FS + S L G +W Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAAAFSAVTSQLATG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +E A AAT HP V+ANR +L Sbjct 58 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEEALAATVHPGAVSANRGRL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 118 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 172 Query 181 VVTAAPAGAV---GVPAA-----------LAIPALGVENIGVGNF--------------- 211 A P GAV G P LA LG+ N+G N Sbjct 173 SAAATPGGAVIIAGFPFLDLGNVTIGGFNLASGNLGLGNLGSFNLGSANTGSVNLGSANI 232 Query 212 ----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGND 267 LG GNIG+ N+G GNTGD N G GN G N G+GNIG+ NLG GN G +N G+GN Sbjct 233 GDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGSGNT 292 Query 268 GNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTG---------GF--- 315 G+TNFG GN G LN+G GN G+ N GFGN G+ N G GN+GDTN G GF Sbjct 293 GDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGFGNK 352 Query 316 --------NSGDLNTGIG---------SPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQ 358 NSG+ N G G + G N GFGN+G G+ GFFNSGN+ G Sbjct 353 GSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGSGNLGFGNSGNGNIGFFNSGNNNIGMG 412 Query 359 NLGNG----SSGFGNASDTSSGFQNAGTALT 385 N GNG S FG++++ SSGF N+G T Sbjct 413 NSGNGVGALSVEFGSSAERSSGFGNSGELST 443 Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 268 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 326 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 327 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 386 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 387 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 446 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 447 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 496 Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 379 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 437 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 438 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 497 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 498 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 557 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 558 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 617 Query 385 T 385 + Sbjct 618 S 618 Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 658 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 659 FDDEVSGYLNGDSRASG 675 Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 467 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 526 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 527 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 586 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 587 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 646 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 647 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 676 >gi|183981425|ref|YP_001849716.1| PPE family protein [Mycobacterium marinum M] gi|183174751|gb|ACC39861.1| PPE family protein [Mycobacterium marinum M] Length=632 Score = 296 bits (758), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 223/422 (53%), Positives = 262/422 (63%), Gaps = 51/422 (12%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F VLPPE+NS RI+AGAG APML AAVAWDGL+AELG AA SF+ + SGLT G AW Sbjct 1 MSFAVLPPEINSLRIFAGAGSAPMLEAAVAWDGLSAELGTAAESFASVTSGLT---GQAW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG AA AMAA AAPY SWL+AA ARA GAA AK A+ +EAAR+A HP VAANRN Sbjct 58 QGAAAKAMAAVAAPYSSWLSAAAARAAGAAGQAKMVASAFEAARSAMVHPLAVAANRNVF 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 + LV+SNLFGQN PAIAATE +YE++WA DVAAMVGYHGGAS AS L WQQ LS LP Sbjct 118 VQLVMSNLFGQNAPAIAATEGTYEEMWAADVAAMVGYHGGASAAASGLPSWQQALSGLPG 177 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGN 236 + G A A+ L N G+GN LG GN G+ N+GSGN G+ N G GN Sbjct 178 I------GQAAAAPAAALFNLPTVNTGLGNSGQWNLGGGNNGSFNLGSGNFGNLNLGGGN 231 Query 237 IGNANLGNGNIGNANLG-------------------------SGNAGFFNFGNGNDGN-- 269 IGN NLG GN G ANLG SGN G NFG+GN GN Sbjct 232 IGNLNLGGGNFGFANLGNGNIGNTNFGSGNNGNLNFGGGNLGSGNFGLGNFGSGNFGNAN 291 Query 270 ----------TNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGD 319 N G N G N+GS N G N+G N G++N G+GN G+ N G +GD Sbjct 292 GMDPVSFSTGNNIGDANLGAFNLGSANIGLSNIGLANIGNNNFGFGNVGNNNIGFGLTGD 351 Query 320 LNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQN 379 GIGS + G N GFGN+G + GFFNSG+ G N G+G++GFGN+ +SGF N Sbjct 352 NQVGIGS-LNAGTGNFGFGNSGDNNIGFFNSGSGNVGVFNSGDGNTGFGNSGGVNSGFWN 410 Query 380 AG 381 +G Sbjct 411 SG 412 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 102/247 (42%), Positives = 125/247 (51%), Gaps = 45/247 (18%) Query 194 AALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIG-------NIGNANLGNGN 246 A + + +G+ NIG NF G GN+GNNN+G G TGD GIG N G N G+ N Sbjct 317 ANIGLSNIGLANIGNNNF-GFGNVGNNNIGFGLTGDNQVGIGSLNAGTGNFGFGNSGDNN 375 Query 247 IGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGF-----LNIGSGNEGSGNLGFGNAGDDN 301 IG N GSGN G FN G+GN G N G N+GF LN G GN G+ NLGF NAG N Sbjct 376 IGFFNSGSGNVGVFNSGDGNTGFGNSGGVNSGFWNSGGLNTGFGNAGANNLGFSNAGSSN 435 Query 302 TG----------WGNSGDTNTGGFNSGDLNTGIGSPV---TQGVANSGFGNTGTGHSGFF 348 G GN+G +NTG FNSG T IG G N+G GN G+ ++GF Sbjct 436 VGDSNAGGSNMGSGNAGYSNTGFFNSGGSATFIGGNTGFFNSGDLNTGGGNAGSVNTGFL 495 Query 349 NSGN--------------SGSGFQNLGNGSSGFGNASDTS-----SGFQNAGTALTRASS 389 NSG+ + SGF N G+ SGF N +D SGFQN T S Sbjct 496 NSGDFNTTVGSADTPAGATQSGFWNTGDNVSGFNNTNDAMFGGGVSGFQNMNTGFFSVGS 555 Query 390 TWADSPR 396 + ++ Sbjct 556 GFGNTGE 562 Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 81/182 (45%), Positives = 97/182 (54%), Gaps = 34/182 (18%) Query 213 GIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNF 272 G GN G NN+G N G++N+G+ N G +N+GSGNAG+ N G N G Sbjct 417 GFGNAGANNLG----------FSNAGSSNVGDSNAGGSNMGSGNAGYSNTGFFNSG---- 462 Query 273 GSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVT-QG 331 G+A F+ GN GF N+GD NTG GN+G NTG NSGD NT +GS T G Sbjct 463 --GSATFI--------GGNTGFFNSGDLNTGGGNAGSVNTGFLNSGDFNTTVGSADTPAG 512 Query 332 VANSGFGNTGTGHSGFFNS-----GNSGSGFQNLGNG----SSGFGNASDTSSGFQNAGT 382 SGF NTG SGF N+ G SGFQN+ G SGFGN + GF NAGT Sbjct 513 ATQSGFWNTGDNVSGFNNTNDAMFGGGVSGFQNMNTGFFSVGSGFGNTGEYQVGFNNAGT 572 Query 383 AL 384 Sbjct 573 GF 574 >gi|15840574|ref|NP_335611.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13880753|gb|AAK45425.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=636 Score = 293 bits (750), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 247/430 (58%), Positives = 277/430 (65%), Gaps = 65/430 (15%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F+VLPPEVNSA ++AGAG P LAAA AWDGLAAELG AA SFS + L +AW Sbjct 19 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALAD---TAW 75 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAA AMAAAAAPY SWL+ A RA A A AKAAAAVYEAARAAT P LVAANR+QL Sbjct 76 QGPAATAMAAAAAPYASWLSTAATRALSAVAQAKAAAAVYEAARAATVDPLLVAANRHQL 135 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATEA+YEQLWA DVAAMV YH GAS VA+QL PW Q + LP Sbjct 136 VSLVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPN 195 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 APA A G PAALAIPALG+ N G+GN IGNI GDYN G GN GNA Sbjct 196 PT--APALASG-PAALAIPALGIGNTGIGNIFSIGNI----------GDYNLGNGNTGNA 242 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLG+GN G ANLGSGN GFFNFG+GN NTNFGSGN G LN+GSGN+G+GN G GN GD Sbjct 243 NLGSGNTGQANLGSGNTGFFNFGSGNTANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDG 302 Query 301 NTGWGNSGDTNTGGFNSGDLNTG---IGSP------------------------------ 327 N G GN G N G N+G N G GSP Sbjct 303 NRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNN 362 Query 328 ----------------VTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNAS 371 + G+ N GFGN+G + G FNSGN+ GF N G+ + GF N+ Sbjct 363 NIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSG 422 Query 372 DTSSGFQNAG 381 DT++GF NAG Sbjct 423 DTNTGFGNAG 432 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/180 (59%), Positives = 121/180 (68%), Gaps = 16/180 (8%) Query 196 LAIPAL--GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN 249 + I AL G+ N+G GN +G+ N GNNN+G N+GD NFG N G+ N G GN G Sbjct 374 IGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGF 433 Query 250 ANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEG--------SGNLGFG--NAGD 299 N G GNAG NFG GN GN NFG GN+GF N+G GN G SG L G N+GD Sbjct 434 TNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGD 493 Query 300 DNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN 359 NTGW NSGD NTGGF+SGDLNTG GSPV Q V NSGFGN GTG+SGF NSG++ SGFQN Sbjct 494 FNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQN 553 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 66/173 (39%), Positives = 84/173 (49%), Gaps = 51/173 (29%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN------------ 249 G EN+GVGN G N G+ N G+ NTGD N G N G AN G+ N G Sbjct 462 GFENMGVGN-SGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGS 520 Query 250 -----------ANLGSGNAGFFNFGNGNDG--NTNFGS---GNAGFLNIGSG------NE 287 N+G+GN+GF N G+ N G NTN G+ G++G LN G G N Sbjct 521 PVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGISNS 580 Query 288 GSG-NLGFGNAGDDNTGWGNS---------------GDTNTGGFNSGDLNTGI 324 G+G N G N G +NTG GNS GD ++GGFN+G+ +G Sbjct 581 GTGFNTGLFNTGFNNTGIGNSATNAAFTTTSGVANSGDNSSGGFNAGNDQSGF 633 >gi|183984290|ref|YP_001852581.1| PPE family protein [Mycobacterium marinum M] gi|183177616|gb|ACC42726.1| PPE family protein [Mycobacterium marinum M] Length=1106 Score = 292 bits (748), Expect = 7e-77, Method: Compositional matrix adjust. Identities = 243/441 (56%), Positives = 278/441 (64%), Gaps = 66/441 (14%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNFM+LPPE+NSARI+AGAG P LAAA AWDGLAA+L AA SFS + GL G AW Sbjct 1 MNFMMLPPEINSARIFAGAGVGPTLAAAAAWDGLAADLASAAQSFSAITVGLV---GEAW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG AA AMAAAA PY SWL A ARA AA A AAAAV+EAA+AATAHP LVAANRNQL Sbjct 58 QGAAATAMAAAARPYASWLGTAAARAAVTAAQANAAAAVFEAAQAATAHPELVAANRNQL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLV+SNLFGQN PAIA TEA+Y+QLWAQDVAAM GYH GAS VA+QL PWQQ L L Sbjct 118 VSLVVSNLFGQNAPAIALTEAAYDQLWAQDVAAMAGYHSGASAVAAQLAPWQQALRTLQN 177 Query 181 VV----TAAPA-------GAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGD 229 V TA P+ G AA+ P L + NIG N L +GNIG+ N+GSGNTG Sbjct 178 RVAGATTALPSSGPAAAAALPGAAAAVGFPVLHIGNIGFAN-LSVGNIGDYNLGSGNTGS 236 Query 230 YNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGN------------A 277 +N G GNIG+A+LG+GN GNANLGSGN GFFN G+GN GN NFGSGN Sbjct 237 FNLGSGNIGDASLGSGNAGNANLGSGNQGFFNLGSGNTGNINFGSGNRLGSLNFGFGNAV 296 Query 278 GFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGS----------- 326 G N G GN GS NLG GN G N G GN+G TN G N+G LN G G+ Sbjct 297 GDANFGWGNAGSSNLGLGNFGSLNWGSGNNGSTNFGSGNTGSLNLGSGNAGDSNVGFGNF 356 Query 327 ----------------------------PVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQ 358 + G N GFGN+GT + GFFNSG++ GF Sbjct 357 GSNNVGFGNNGNNNIGIGLNGDDLIGIGALNSGAGNLGFGNSGTNNIGFFNSGDNNIGFF 416 Query 359 NLGNGSSGFGNASDTSSGFQN 379 N G+G+ GF NA D ++GF N Sbjct 417 NSGSGNFGFENAGDINTGFWN 437 Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 118/250 (48%), Positives = 139/250 (56%), Gaps = 43/250 (17%) Query 177 VLPPVVTAAPAGAVGVPA-ALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIG 235 VL A A G+PA L P LG+ N GVGN LG+GNIG+ N+GSGNTGD NFG G Sbjct 661 VLTGTDGLAAATTSGLPALDLPAPNLGIGNAGVGN-LGLGNIGDYNLGSGNTGDANFGFG 719 Query 236 NIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFL----------NIGSG 285 NIG ANLG+GN GN NLGSGN G NFG+GN G N GSGN G NIGSG Sbjct 720 NIGQANLGSGNAGNTNLGSGNTGSTNFGSGNIGALNLGSGNHGDANLGFGNFGNGNIGSG 779 Query 286 NEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLN------------------------ 321 N G+GN G GN G N G GN+G TN G N G+ N Sbjct 780 NHGAGNFGSGNTGSRNLGSGNAGSTNFGSGNHGNSNVGLGNFGNNNLGLGNNGSNNIGFG 839 Query 322 ------TGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSS 375 GIG+ + G N GFGNTG + G FNSG++ GF N G+G+ G N+ DT++ Sbjct 840 LTGDNLVGIGA-LNSGAGNLGFGNTGDNNIGLFNSGDNNVGFFNSGDGNFGLANSGDTNT 898 Query 376 GFQNAGTALT 385 G NAG+ T Sbjct 899 GLWNAGSTNT 908 Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 98/181 (55%), Positives = 117/181 (65%), Gaps = 18/181 (9%) Query 196 LAIPAL--GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN 249 + I AL G N+G GN +G+ N G+NNVG N+GD NFG+ N G+ N G N G+ Sbjct 846 VGIGALNSGAGNLGFGNTGDNNIGLFNSGDNNVGFFNSGDGNFGLANSGDTNTGLWNAGS 905 Query 250 ANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLG-----------FGNAG 298 N G GNAG +FG GN G+ N G GNAG N+G+GN GS N G F N G Sbjct 906 TNTGFGNAGSADFGFGNAGDRNMGFGNAGAANMGAGNSGSYNTGSFNSGTLNTGDF-NGG 964 Query 299 DDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQ 358 D NTGWGNSG+TNTGG NSGDLNTG GS Q V NSGFGN G+G+SGF N+G++ SGF Sbjct 965 DHNTGWGNSGNTNTGGINSGDLNTGFGSSADQAVTNSGFGNNGSGNSGFNNTGDTNSGFH 1024 Query 359 N 359 N Sbjct 1025 N 1025 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 103/215 (48%), Positives = 122/215 (57%), Gaps = 32/215 (14%) Query 198 IPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNA 257 + +G N G GN LG GN G NN+G N+GD N G N G+ N G N G+ N G N Sbjct 380 LIGIGALNSGAGN-LGFGNSGTNNIGFFNSGDNNIGFFNSGSGNFGFENAGDINTGFWNG 438 Query 258 GFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAG------------------- 298 N G GN G +NFG GN+G N+G+GN GS N+G GNAG Sbjct 439 RDTNTGFGNSGLSNFGFGNSGVNNVGAGNGGSSNVGLGNAGLLNTGSFNSGNFNTGDFNS 498 Query 299 -----------DDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGF 347 NTG GNSG TNTG FNSGDLNTG+GSP Q VANSGF N G+G+SGF Sbjct 499 GSMNTGYFNSSGHNTGLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNSGF 558 Query 348 FNSGNSGSGFQNLGNGSSGFGNASDT-SSGFQNAG 381 N+G+ SGF N N +SGF NA T +SG N+G Sbjct 559 NNTGSFSSGFFNSTNSNSGFLNAGGTVNSGINNSG 593 Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust. Identities = 79/196 (41%), Positives = 93/196 (48%), Gaps = 42/196 (21%) Query 213 GIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNI----------GNANLGSGNAGFFNF 262 GI N GN N G GN GD NFG+ N G N G GN G N G+G++G FN Sbjct 588 GINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFPYTSGLFNSGNGSSGVFNA 647 Query 263 GN--------------GNDGNT---------------NFGSGNAGFLNIGSGNEGSGNLG 293 G+ G DG N G GNAG N+G GN G NLG Sbjct 648 GDEQSGFFGTSGLVLTGTDGLAAATTSGLPALDLPAPNLGIGNAGVGNLGLGNIGDYNLG 707 Query 294 FGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNS 353 GN GD N G+GN G N G N+G+ N G G+ G N G GN G + G N G++ Sbjct 708 SGNTGDANFGFGNIGQANLGSGNAGNTNLGSGNT---GSTNFGSGNIGALNLGSGNHGDA 764 Query 354 GSGFQNLGNGSSGFGN 369 GF N GNG+ G GN Sbjct 765 NLGFGNFGNGNIGSGN 780 Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust. Identities = 92/258 (36%), Positives = 108/258 (42%), Gaps = 96/258 (37%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGN-----IGNANLGNGNIGNANLGSGN 256 G N G+ NF G GN G NNVG+GN G N G+GN G+ N GN N G+ N GS N Sbjct 444 GFGNSGLSNF-GFGNSGVNNVGAGNGGSSNVGLGNAGLLNTGSFNSGNFNTGDFNSGSMN 502 Query 257 AGFFN-----FGNGNDGNTNFGSGNAGFLNIGSG-------------NEGSGNLGFGN-- 296 G+FN G GN G TN G N+G LN G G N GSGN GF N Sbjct 503 TGYFNSSGHNTGLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNSGFNNTG 562 Query 297 -----------------------------AGDDNTGWGNSGDTNTGGFNSGDLNTGIGS- 326 +G+ N G GN GD N G FN+G NTG G+ Sbjct 563 SFSSGFFNSTNSNSGFLNAGGTVNSGINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNS 622 Query 327 ------PVTQGVANSGFGNTGTGHSGFFNSGNSGSGF----------------------- 357 P T G+ NSG G SG FN+G+ SGF Sbjct 623 SGGAVFPYTSGLFNSG-----NGSSGVFNAGDEQSGFFGTSGLVLTGTDGLAAATTSGLP 677 Query 358 ------QNLGNGSSGFGN 369 NLG G++G GN Sbjct 678 ALDLPAPNLGIGNAGVGN 695 Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust. Identities = 82/234 (36%), Positives = 103/234 (45%), Gaps = 68/234 (29%) Query 213 GIGNIGNNNVGSGNTGDYNFGIG--------NIGNANLGNGNIGNANLGSGNAGFFNFGN 264 G+GN G N G N+GD N G+G N G N G+GN G N GS ++GFFN N Sbjct 514 GLGNSGFTNTGFFNSGDLNTGMGSPEDQSVANSGFRNAGSGNSGFNNTGSFSSGFFNSTN 573 Query 265 GNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGG---------- 314 N G N G G +N G N G+ N G GN GDDN G N+G NTG Sbjct 574 SNSGFLNAG----GTVNSGINNSGNTNAGIGNLGDDNFGLFNNGTFNTGAGNSSGGAVFP 629 Query 315 ---------------FNSGDLNTGI--------------------GSPVTQ------GVA 333 FN+GD +G G P G+ Sbjct 630 YTSGLFNSGNGSSGVFNAGDEQSGFFGTSGLVLTGTDGLAAATTSGLPALDLPAPNLGIG 689 Query 334 NSGFGNTGTGHSGFFN--SGNSGS---GFQNLGNGSSGFGNASDTSSGFQNAGT 382 N+G GN G G+ G +N SGN+G GF N+G + G GNA +T+ G N G+ Sbjct 690 NAGVGNLGLGNIGDYNLGSGNTGDANFGFGNIGQANLGSGNAGNTNLGSGNTGS 743 >gi|15841015|ref|NP_336052.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|148822772|ref|YP_001287526.1| PPE family protein [Mycobacterium tuberculosis F11] gi|254231776|ref|ZP_04925103.1| PPE family protein [Mycobacterium tuberculosis C] 9 more sequence titles Length=760 Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 83 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 139 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 140 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 199 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 200 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 254 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 255 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 311 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 312 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 371 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 372 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 431 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 432 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 461 Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 350 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 408 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 409 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 468 Query 306 ------NSGDTNTGGFNSGDLNTGIG----------------SPVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G + + G NSG G Sbjct 469 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 528 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 529 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 578 Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 96/251 (39%), Positives = 123/251 (50%), Gaps = 67/251 (26%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 461 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 519 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 520 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 579 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 580 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 639 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQ------------------NLGNGSSGFGNASDTS 374 NSG+ +TGT +SG+ N+G SGF N+GN ++G N D Sbjct 640 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 699 Query 375 SGFQNAGTALT 385 SGF+N+ +T Sbjct 700 SGFRNSVPTIT 710 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 80/198 (41%), Positives = 101/198 (52%), Gaps = 22/198 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 561 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 620 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 621 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 680 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 681 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 740 Query 360 LGNGSSGFGNASDTSSGF 377 + SG+ N +SG+ Sbjct 741 FDDEVSGYLNGDSRASGW 758 Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 73/179 (41%), Positives = 90/179 (51%), Gaps = 10/179 (5%) Query 216 NIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSG 275 N G N G GN+G N G++G N G+ N G+ N GS N G FN GN N G N G+ Sbjct 559 NSGTTNTGIGNSGG-NLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNI 617 Query 276 NAGFLNIGSGNEG---SGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GF N G N G S N N+G +TG NSG N G FNSG N Sbjct 618 NTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVT 677 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGFQNAGTALT 385 NSG N G ++G N G+ SGF+N G + SGF NA + SGF N G+ ++ Sbjct 678 GNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMS 736 >gi|308373181|ref|ZP_07431301.2| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308374342|ref|ZP_07435680.2| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308375613|ref|ZP_07444506.2| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308376758|ref|ZP_07439927.2| PPE family protein [Mycobacterium tuberculosis SUMu008] gi|308338567|gb|EFP27418.1| PPE family protein [Mycobacterium tuberculosis SUMu005] gi|308342268|gb|EFP31119.1| PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308345763|gb|EFP34614.1| PPE family protein [Mycobacterium tuberculosis SUMu007] gi|308350063|gb|EFP38914.1| PPE family protein [Mycobacterium tuberculosis SUMu008] Length=679 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 58 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 59 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 118 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 119 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 173 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 174 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 230 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 231 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 290 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 291 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 350 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 351 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 380 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 269 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 327 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 328 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 387 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 388 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 447 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 448 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 497 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 96/251 (39%), Positives = 123/251 (50%), Gaps = 67/251 (26%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 380 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 438 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 439 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 498 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 499 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 558 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQ------------------NLGNGSSGFGNASDTS 374 NSG+ +TGT +SG+ N+G SGF N+GN ++G N D Sbjct 559 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVDDHL 618 Query 375 SGFQNAGTALT 385 SGF+N+ +T Sbjct 619 SGFRNSVPTIT 629 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/197 (41%), Positives = 99/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 480 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 539 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 540 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 599 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N P G AN SGF N GT SGFFN G+ SGF N Sbjct 600 GLANVGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 659 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 660 FDDEVSGYLNGDSRASG 676 Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust. Identities = 76/212 (36%), Positives = 99/212 (47%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 468 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 527 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 528 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 587 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N + SGF+N G + SGF NA + SGF Sbjct 588 RDEHAEFVTGNSGLANVGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGF 647 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 648 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 677 >gi|306779561|ref|ZP_07417898.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|306784292|ref|ZP_07422614.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|306967658|ref|ZP_07480319.1| PPE family protein [Mycobacterium tuberculosis SUMu009] gi|308371996|ref|ZP_07426982.2| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308327495|gb|EFP16346.1| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308330957|gb|EFP19808.1| PPE family protein [Mycobacterium tuberculosis SUMu003] gi|308334778|gb|EFP23629.1| PPE family protein [Mycobacterium tuberculosis SUMu004] gi|308354717|gb|EFP43568.1| PPE family protein [Mycobacterium tuberculosis SUMu009] Length=681 Score = 291 bits (744), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 61 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 121 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 175 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 176 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 232 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 233 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 292 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 293 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 352 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 353 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 382 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 271 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 329 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 330 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 389 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 390 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 449 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 450 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 499 Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 96/251 (39%), Positives = 123/251 (50%), Gaps = 67/251 (26%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 382 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 440 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 441 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 500 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 501 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 560 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQ------------------NLGNGSSGFGNASDTS 374 NSG+ +TGT +SG+ N+G SGF N+GN ++G N D Sbjct 561 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVDDHL 620 Query 375 SGFQNAGTALT 385 SGF+N+ +T Sbjct 621 SGFRNSVPTIT 631 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/197 (41%), Positives = 99/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 482 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 541 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 542 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 601 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N P G AN SGF N GT SGFFN G+ SGF N Sbjct 602 GLANVGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 661 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 662 FDDEVSGYLNGDSRASG 678 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 76/203 (38%), Positives = 97/203 (48%), Gaps = 12/203 (5%) Query 216 NIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSG 275 N G N G GN+G N G++G N G+ N G+ N GS N G FN GN N G N G+ Sbjct 480 NSGTTNTGIGNSGG-NLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNI 538 Query 276 NAGFLNIGSGNEG---SGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GF N G N G S N N+G +TG NSG N G FNSG N Sbjct 539 NTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVT 598 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGFQNAGTALTR 386 NSG N G ++G N + SGF+N G + SGF NA + SGF N G+ ++ Sbjct 599 GNSGLANVGNYNAGIINVDDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSG 658 Query 387 ASSTWADSPRAWPIRAPSRLQVW 409 ++ D + + SR W Sbjct 659 FAN--FDDEVSGYLNGDSRASGW 679 >gi|121637470|ref|YP_977693.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989944|ref|YP_002644631.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|253799397|ref|YP_003032398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] 23 more sequence titles Length=678 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 58 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 118 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 172 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 173 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 229 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 230 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 289 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 290 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 349 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 350 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 379 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 268 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 326 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 327 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 386 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 387 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 446 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 447 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 496 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 379 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 437 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 438 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 497 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 498 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 557 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 558 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 617 Query 385 T 385 + Sbjct 618 S 618 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 658 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 659 FDDEVSGYLNGDSRASG 675 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 467 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 526 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 527 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 586 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 587 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 646 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 647 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 676 >gi|323719996|gb|EGB29108.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] gi|339294522|gb|AEJ46633.1| PPE family protein [Mycobacterium tuberculosis CCDC5079] Length=679 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 58 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 59 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 118 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 119 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 173 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 174 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 230 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 231 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 290 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 291 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 350 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 351 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 380 Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 269 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 327 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 328 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 387 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 388 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 447 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 448 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 497 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 380 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 438 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 439 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 498 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 499 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 558 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 559 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 618 Query 385 T 385 + Sbjct 619 S 619 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 480 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 539 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 540 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 599 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 600 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 659 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 660 FDDEVSGYLNGDSRASG 676 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 468 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 527 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 528 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 587 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 588 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 647 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 648 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 677 >gi|183985299|ref|YP_001853590.1| PPE family protein [Mycobacterium marinum M] gi|183178625|gb|ACC43735.1| PPE family protein [Mycobacterium marinum M] Length=729 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 206/397 (52%), Positives = 251/397 (64%), Gaps = 28/397 (7%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF+V PPE+ SARIY+G G M +AA AWDGLAAEL +AA+SF + + L AG AW Sbjct 1 MNFLVDPPELTSARIYSGPGSGQMFSAAEAWDGLAAELRLAASSFESVTANLVAG---AW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QG +A AMAA A P++ L +AE AAA A+ A+ +EA RAAT HPALVAANR Q Sbjct 58 QGASATAMAAVATPHVRLLQGLAGQAEQAAAQARVVASAFEAVRAATVHPALVAANRAQF 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLP- 179 +SL LSN+FGQN PAIAA E YE++WAQDV AMVGYH +S A QLTP+ ++L+ L Sbjct 118 VSLALSNIFGQNAPAIAAVETDYEEMWAQDVTAMVGYHSTSSAAAEQLTPFHRMLAGLSG 177 Query 180 -PVVTAAPAGAVG--VPAALAIPALGVENIGVGNF--------------LGIGNIGNNNV 222 V +A G +G V L+I G+ N+G+GN LG GN G N+ Sbjct 178 RSVSSAVAGGRLGGFVIPGLSIGNRGLLNLGLGNTGNLNLGWGNAGNLNLGSGNTGGINL 237 Query 223 GSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNI 282 GSGNTG +N G GN G NLG+GNIGN NLGSGN G N G+GN G+ N GSGN G LN+ Sbjct 238 GSGNTGSFNPGWGNAGKLNLGSGNIGNMNLGSGNTGILNVGSGNIGDFNLGSGNIGNLNL 297 Query 283 GSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV-------ANS 335 GSGN G GN G GN G+ N G GN+G N G N+G N G G+ V +N Sbjct 298 GSGNIGKGNFGIGNTGNFNLGGGNTGGHNFGSGNTGGHNFGNGNSGNHNVGGGNYGNSNF 357 Query 336 GFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASD 372 G GN G+G+ GF NSGN+ GF N GN + GFG D Sbjct 358 GSGNIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGD 394 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 106/214 (50%), Positives = 129/214 (61%), Gaps = 22/214 (10%) Query 202 GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNA 257 G+ N+G GN LG GNIGN N+GSGN G NFGIGN GN NLG GN G N GSGN Sbjct 273 GILNVGSGNIGDFNLGSGNIGNLNLGSGNIGKGNFGIGNTGNFNLGGGNTGGHNFGSGNT 332 Query 258 GFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNS 317 G NFGNGN GN N G GN G N GSGN GSGN GFGN+G++N G+GNSG+ N G + Sbjct 333 GGHNFGNGNSGNHNVGGGNYGNSNFGSGNIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLT 392 Query 318 GDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLG---------------- 361 GD GIG + G N GFGN+G + GFFNSG++ GF N G Sbjct 393 GDGQIGIGG-LNSGSGNIGFGNSGNNNIGFFNSGDNNVGFLNSGSENKGFINSGLGTGRG 451 Query 362 -NGSSGFGNASDTSSGFQNAGTALTRASSTWADS 394 N S+G GN+ D ++G N+G + ++ W +S Sbjct 452 PNLSAGIGNSGDLNTGLFNSGGSSATTNTGWFNS 485 Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 110/256 (43%), Positives = 132/256 (52%), Gaps = 69/256 (26%) Query 201 LGVENIGVGNF---------LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNAN 251 LG NIG GNF LG GN G +N GSGNTG +NFG GN GN N+G GN GN+N Sbjct 297 LGSGNIGKGNFGIGNTGNFNLGGGNTGGHNFGSGNTGGHNFGNGNSGNHNVGGGNYGNSN 356 Query 252 LGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSG------------NEGSGNLGFGNAGD 299 GSGN G NFG GN GN N G GN+G NIG G N GSGN+GFGN+G+ Sbjct 357 FGSGNIGSGNFGFGNSGNNNIGFGNSGNNNIGFGLTGDGQIGIGGLNSGSGNIGFGNSGN 416 Query 300 DNTGWGNSGDTNTG---------GF------------------NSGDLNTGI----GSPV 328 +N G+ NSGD N G GF NSGDLNTG+ GS Sbjct 417 NNIGFFNSGDNNVGFLNSGSENKGFINSGLGTGRGPNLSAGIGNSGDLNTGLFNSGGSSA 476 Query 329 T-----------------QGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNAS 371 T G N+GF N+G ++G FNSG+ +G N GN + NA Sbjct 477 TTNTGWFNSGSHNTGIGNSGDTNTGFFNSGNLNTGLFNSGDVNTGLFNSGNNNFAAFNAG 536 Query 372 DTSSGFQNAGTALTRA 387 T++G NAG++ T A Sbjct 537 STNTGSFNAGSSNTLA 552 Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 84/152 (56%), Positives = 96/152 (64%), Gaps = 12/152 (7%) Query 226 NTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSG 285 N+G +N GIGN G+ N G N GN N G N+G N G N GN NF + NAG N GS Sbjct 484 NSGSHNTGIGNSGDTNTGFFNSGNLNTGLFNSGDVNTGLFNSGNNNFAAFNAGSTNTGSF 543 Query 286 NEGSGN-LGFGNAGDDNTGWGNSGDTNTGGFNSG----------DLNTGIGSPVTQGVAN 334 N GS N L F N+GD NTG+ SG+ NTGGFNSG DLNTGIGSPV Q VAN Sbjct 544 NAGSSNTLAF-NSGDSNTGYAGSGNYNTGGFNSGASNTGFFDSGDLNTGIGSPVDQNVAN 602 Query 335 SGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSG 366 SGF NTGTG+SG +G+ SGF N G +SG Sbjct 603 SGFMNTGTGNSGIRGTGDYNSGFANRGTYNSG 634 Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust. Identities = 70/177 (40%), Positives = 91/177 (52%), Gaps = 18/177 (10%) Query 216 NIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSG--------NAGFFNFGNGND 267 N G++N G +G+YN G N G +N G + G+ N G G N+GF N G GN Sbjct 554 NSGDSNTGYAGSGNYNTGGFNSGASNTGFFDSGDLNTGIGSPVDQNVANSGFMNTGTGNS 613 Query 268 GNTNFGSGNAGFLNIGSGNEGSGNLGF-----GNAGDDNTGWGNSGDTNTGGFNSGDLNT 322 G G N+GF N G+ N G+ + G N+G N G N+G N G +NSG NT Sbjct 614 GIRGTGDYNSGFANRGTYNSGADSAGHEAGMTSNSGVLNIGSNNAGFLNYGNYNSGFRNT 673 Query 323 GI--GSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGF 377 G+PV SGF N G +SG F++G SGF L + SSG NA D SG+ Sbjct 674 VYPSGTPVGN---TSGFVNVGAVNSGLFSTGTGDSGFGQLADYSSGVLNAKDYISGY 727 >gi|297634116|ref|ZP_06951896.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=687 Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 10 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 66 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 67 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 126 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 127 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 181 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 182 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 238 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 239 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 298 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 299 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 358 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 359 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 388 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 277 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 335 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 336 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 395 Query 306 ------NSGDTNTGGFNSGDLNTGIG----------------SPVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G + + G NSG G Sbjct 396 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 455 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 456 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 505 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 388 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 446 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 447 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 506 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 507 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 566 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 567 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 626 Query 385 T 385 + Sbjct 627 S 627 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/198 (41%), Positives = 101/198 (52%), Gaps = 22/198 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 488 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 547 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 548 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 607 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 608 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 667 Query 360 LGNGSSGFGNASDTSSGF 377 + SG+ N +SG+ Sbjct 668 FDDEVSGYLNGDSRASGW 685 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 476 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 535 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 536 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 595 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 596 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 655 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 656 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 685 >gi|254550567|ref|ZP_05141014.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297731103|ref|ZP_06960221.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|298525060|ref|ZP_07012469.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|298494854|gb|EFI30148.1| predicted protein [Mycobacterium tuberculosis 94_M4241A] gi|339298158|gb|AEJ50268.1| PPE family protein [Mycobacterium tuberculosis CCDC5180] Length=681 Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 208/390 (54%), Positives = 247/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 61 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 121 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 175 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 176 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 232 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 233 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 292 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 293 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 352 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 353 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 382 Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 271 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 329 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 330 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 389 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 390 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 449 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 450 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 499 Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 382 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 440 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 441 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 500 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 501 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 560 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 561 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 620 Query 385 T 385 + Sbjct 621 S 621 Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 482 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 541 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 542 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 601 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 602 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 661 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 662 FDDEVSGYLNGDSRASG 678 Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 470 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 529 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 530 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 589 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 590 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 649 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 650 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 679 >gi|57116882|ref|YP_177817.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148661344|ref|YP_001282867.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|6136475|sp|Q10778.2|PPE21_MYCTU RecName: Full=Uncharacterized PPE family protein PPE21 gi|38684031|emb|CAE55401.1| PPE FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148505496|gb|ABQ73305.1| PPE family protein [Mycobacterium tuberculosis H37Ra] Length=678 Score = 288 bits (738), Expect = 9e-76, Method: Compositional matrix adjust. Identities = 207/390 (54%), Positives = 246/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 1 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 58 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 118 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 172 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 173 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 229 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N +GN G N+GSGN G N+G GN GS NLG Sbjct 230 ANIGDLNLGSGNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 289 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 290 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 349 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 350 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 379 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 268 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 326 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 327 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 386 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 387 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 446 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 447 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 496 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 379 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 437 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 438 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 497 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 498 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 557 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 558 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 617 Query 385 T 385 + Sbjct 618 S 618 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 479 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 538 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 539 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 598 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 599 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 658 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 659 FDDEVSGYLNGDSRASG 675 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 467 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 526 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 527 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 586 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 587 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 646 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 647 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 676 >gi|308378968|ref|ZP_07484506.2| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308358702|gb|EFP47553.1| PPE family protein [Mycobacterium tuberculosis SUMu010] Length=679 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 207/390 (54%), Positives = 246/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 2 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 58 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 59 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 118 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 119 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 173 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 174 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 230 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N +GN G N+GSGN G N+G GN GS NLG Sbjct 231 ANIGDLNLGSGNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 290 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 291 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 350 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 351 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 380 Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 269 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 327 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 328 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 387 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 388 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 447 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 448 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 497 Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 380 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 438 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 439 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 498 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 499 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 558 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 559 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 618 Query 385 T 385 + Sbjct 619 S 619 Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 480 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 539 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 540 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 599 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 600 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 659 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 660 FDDEVSGYLNGDSRASG 676 Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 77/212 (37%), Positives = 100/212 (48%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 468 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 527 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+G +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 528 TGYFNSGNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 587 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 588 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 647 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 648 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 677 >gi|306775737|ref|ZP_07414074.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|307084126|ref|ZP_07493239.1| PPE family protein [Mycobacterium tuberculosis SUMu012] gi|308380110|ref|ZP_07488731.2| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308215829|gb|EFO75228.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308362583|gb|EFP51434.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308366248|gb|EFP55099.1| PPE family protein [Mycobacterium tuberculosis SUMu012] Length=681 Score = 288 bits (738), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 207/390 (54%), Positives = 246/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +LG AAASFS + S L G +W Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLGSAAASFSAVTSQLATG---SW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 61 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 121 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 175 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 176 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 232 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N +GN G N+GSGN G N+G GN GS NLG Sbjct 233 ANIGDLNLGSGNIGSYNLGGGNTGDLNPDSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 292 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 293 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 352 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 353 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 382 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 271 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 329 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 330 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 389 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 390 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 449 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 450 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 499 Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 94/241 (40%), Positives = 120/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 382 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 440 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 441 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 500 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NSG+ NTG FNSGDLNTG+ + V Q V Sbjct 501 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTGFFNSGDLNTGLFNSVNQPV 560 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 561 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 620 Query 385 T 385 + Sbjct 621 S 621 Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 80/197 (41%), Positives = 100/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N G+ N G Sbjct 482 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNINTG 541 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 542 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 601 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 602 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 661 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 662 FDDEVSGYLNGDSRASG 678 Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 77/203 (38%), Positives = 98/203 (49%), Gaps = 12/203 (5%) Query 216 NIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSG 275 N G N G GN+G N G++G N G+ N G+ N GS N G FN GN N G N G+ Sbjct 480 NSGTTNTGIGNSGG-NLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSGNI 538 Query 276 NAGFLNIGSGNEG---SGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GF N G N G S N N+G +TG NSG N G FNSG N Sbjct 539 NTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVT 598 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGFQNAGTALTR 386 NSG N G ++G N G+ SGF+N G + SGF NA + SGF N G+ ++ Sbjct 599 GNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSG 658 Query 387 ASSTWADSPRAWPIRAPSRLQVW 409 ++ D + + SR W Sbjct 659 FAN--FDDEVSGYLNGDSRASGW 679 >gi|148822348|ref|YP_001287102.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253799824|ref|YP_003032825.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254364039|ref|ZP_04980085.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] 15 more sequence titles Length=636 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 248/430 (58%), Positives = 278/430 (65%), Gaps = 65/430 (15%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F+VLPPEVNSA ++AGAG P LAAA AWDGLAAELG AA SFS + L +AW Sbjct 19 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALAD---TAW 75 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAA AMAAAAAPY SWL+ A RA AAA AKAAAAVYEAARAAT P LVAANR+QL Sbjct 76 QGPAATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQL 135 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATEA+YEQLWA DVAAMV YH GAS VA+QL PW Q + LP Sbjct 136 VSLVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPN 195 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 APA A G PAALAIPALG+ N G+GN IGNI GDYN G GN GNA Sbjct 196 PT--APALASG-PAALAIPALGIGNTGIGNIFSIGNI----------GDYNLGNGNTGNA 242 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLG+GN G ANLGSGN GFFNFG+GN NTNFGSGN G LN+GSGN+G+GN G GN GD Sbjct 243 NLGSGNTGQANLGSGNTGFFNFGSGNTANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDG 302 Query 301 NTGWGNSGDTNTGGFNSGDLNTG---IGSP------------------------------ 327 N G GN G N G N+G N G GSP Sbjct 303 NRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNN 362 Query 328 ----------------VTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNAS 371 + G+ N GFGN+G + G FNSGN+ GF N G+ + GF N+ Sbjct 363 NIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSG 422 Query 372 DTSSGFQNAG 381 DT++GF NAG Sbjct 423 DTNTGFGNAG 432 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/180 (59%), Positives = 121/180 (68%), Gaps = 16/180 (8%) Query 196 LAIPAL--GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN 249 + I AL G+ N+G GN +G+ N GNNN+G N+GD NFG N G+ N G GN G Sbjct 374 IGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGF 433 Query 250 ANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEG--------SGNLGFG--NAGD 299 N G GNAG NFG GN GN NFG GN+GF N+G GN G SG L G N+GD Sbjct 434 TNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGD 493 Query 300 DNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN 359 NTGW NSGD NTGGF+SGDLNTG GSPV Q V NSGFGN GTG+SGF NSG++ SGFQN Sbjct 494 FNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQN 553 Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust. Identities = 66/173 (39%), Positives = 84/173 (49%), Gaps = 51/173 (29%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN------------ 249 G EN+GVGN G N G+ N G+ NTGD N G N G AN G+ N G Sbjct 462 GFENMGVGN-SGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGS 520 Query 250 -----------ANLGSGNAGFFNFGNGNDG--NTNFGS---GNAGFLNIGSG------NE 287 N+G+GN+GF N G+ N G NTN G+ G++G LN G G N Sbjct 521 PVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGISNS 580 Query 288 GSG-NLGFGNAGDDNTGWGNS---------------GDTNTGGFNSGDLNTGI 324 G+G N G N G +NTG GNS GD ++GGFN+G+ +G Sbjct 581 GTGFNTGLFNTGFNNTGIGNSATNAAFTTTSGVANSGDNSSGGFNAGNDQSGF 633 >gi|289573789|ref|ZP_06454016.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538220|gb|EFD42798.1| PPE family protein [Mycobacterium tuberculosis K85] Length=461 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 248/430 (58%), Positives = 278/430 (65%), Gaps = 65/430 (15%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F+VLPPEVNSA ++AGAG P LAAA AWDGLAAELG AA SFS + L +AW Sbjct 19 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALAD---TAW 75 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAA AMAAAAAPY SWL+ A RA AAA AKAAAAVYEAARAAT P LVAANR+QL Sbjct 76 QGPAATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQL 135 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATEA+YEQLWA DVAAMV YH GAS VA+QL PW Q + LP Sbjct 136 VSLVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPN 195 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 APA A G PAALAIPALG+ N G+GN IGNI GDYN G GN GNA Sbjct 196 --PTAPALASG-PAALAIPALGIGNTGIGNIFSIGNI----------GDYNLGNGNTGNA 242 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLG+GN G ANLGSGN GFFNFG+GN NTNFGSGN G LN+GSGN+G+GN G GN GD Sbjct 243 NLGSGNTGQANLGSGNTGFFNFGSGNTANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDG 302 Query 301 NTGWGNSGDTNTGGFNSGDLNTG---IGSP------------------------------ 327 N G GN G N G N+G N G GSP Sbjct 303 NRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNN 362 Query 328 ----------------VTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNAS 371 + G+ N GFGN+G + G FNSGN+ GF N G+ + GF N+ Sbjct 363 NIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSG 422 Query 372 DTSSGFQNAG 381 DT++GF NAG Sbjct 423 DTNTGFGNAG 432 Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 56/102 (55%), Positives = 63/102 (62%), Gaps = 13/102 (12%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGD-------YNFGIGNIGNANLGNGNIGNANLG 253 LG+ N+G N LGI N+GNNN+G G TGD N GIGN+G N GN NIG N G Sbjct 344 LGIANLGNNN-LGIANLGNNNIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSG 402 Query 254 SGNAGFFN-----FGNGNDGNTNFGSGNAGFLNIGSGNEGSG 290 + N GFFN FG N G+TN G GNAGF N G GN GSG Sbjct 403 NNNIGFFNSGDSNFGFFNSGDTNTGFGNAGFTNTGFGNAGSG 444 Score = 40.4 bits (93), Expect = 0.70, Method: Compositional matrix adjust. Identities = 44/102 (44%), Positives = 54/102 (53%), Gaps = 4/102 (3%) Query 282 IGSGNEGSGNL-GFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNT 340 +G GN G GN+ GN GD N G GN+G+ N G N+G N G G+ G N G GNT Sbjct 213 LGIGNTGIGNIFSIGNIGDYNLGNGNTGNANLGSGNTGQANLGSGN---TGFFNFGSGNT 269 Query 341 GTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGT 382 + G N GN G N GNG+ G GN D + G N G+ Sbjct 270 ANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDGNRGSGNVGS 311 >gi|308231748|ref|ZP_07413627.2| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308370051|ref|ZP_07420132.2| PPE family protein [Mycobacterium tuberculosis SUMu002] gi|308370629|ref|ZP_07422169.2| PPE family protein [Mycobacterium tuberculosis SUMu003] 11 more sequence titles Length=619 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 248/430 (58%), Positives = 278/430 (65%), Gaps = 65/430 (15%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 M+F+VLPPEVNSA ++AGAG P LAAA AWDGLAAELG AA SFS + L +AW Sbjct 2 MSFLVLPPEVNSALMFAGAGSGPTLAAAAAWDGLAAELGQAANSFSSATAALAD---TAW 58 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAA AMAAAAAPY SWL+ A RA AAA AKAAAAVYEAARAAT P LVAANR+QL Sbjct 59 QGPAATAMAAAAAPYASWLSTAATRALSAAAQAKAAAAVYEAARAATVDPLLVAANRHQL 118 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLVLSNLFGQN PAIAATEA+YEQLWA DVAAMV YH GAS VA+QL PW Q + LP Sbjct 119 VSLVLSNLFGQNAPAIAATEAAYEQLWAADVAAMVSYHSGASAVAAQLAPWAQAVRALPN 178 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA 240 APA A G PAALAIPALG+ N G+GN IGNI GDYN G GN GNA Sbjct 179 PT--APALASG-PAALAIPALGIGNTGIGNIFSIGNI----------GDYNLGNGNTGNA 225 Query 241 NLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDD 300 NLG+GN G ANLGSGN GFFNFG+GN NTNFGSGN G LN+GSGN+G+GN G GN GD Sbjct 226 NLGSGNTGQANLGSGNTGFFNFGSGNTANTNFGSGNLGNLNLGSGNDGNGNFGLGNIGDG 285 Query 301 NTGWGNSGDTNTGGFNSGDLNTG---IGSP------------------------------ 327 N G GN G N G N+G N G GSP Sbjct 286 NRGSGNVGSFNFGTANAGSFNVGSANHGSPNVGFANLGNNNLGIANLGNNNLGIANLGNN 345 Query 328 ----------------VTQGVANSGFGNTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNAS 371 + G+ N GFGN+G + G FNSGN+ GF N G+ + GF N+ Sbjct 346 NIGIGLTGDNMIGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSG 405 Query 372 DTSSGFQNAG 381 DT++GF NAG Sbjct 406 DTNTGFGNAG 415 Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 106/180 (59%), Positives = 121/180 (68%), Gaps = 16/180 (8%) Query 196 LAIPAL--GVENIGVGNF----LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN 249 + I AL G+ N+G GN +G+ N GNNN+G N+GD NFG N G+ N G GN G Sbjct 357 IGIGALNSGIGNLGFGNSGNNNIGLFNSGNNNIGFFNSGDSNFGFFNSGDTNTGFGNAGF 416 Query 250 ANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEG--------SGNLGFG--NAGD 299 N G GNAG NFG GN GN NFG GN+GF N+G GN G SG L G N+GD Sbjct 417 TNTGFGNAGSGNFGFGNAGNNNFGFGNSGFENMGVGNSGAYNTGSFNSGTLNTGDLNSGD 476 Query 300 DNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN 359 NTGW NSGD NTGGF+SGDLNTG GSPV Q V NSGFGN GTG+SGF NSG++ SGFQN Sbjct 477 FNTGWANSGDINTGGFHSGDLNTGFGSPVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQN 536 Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust. Identities = 66/173 (39%), Positives = 84/173 (49%), Gaps = 51/173 (29%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGN------------ 249 G EN+GVGN G N G+ N G+ NTGD N G N G AN G+ N G Sbjct 445 GFENMGVGN-SGAYNTGSFNSGTLNTGDLNSGDFNTGWANSGDINTGGFHSGDLNTGFGS 503 Query 250 -----------ANLGSGNAGFFNFGNGNDG--NTNFGS---GNAGFLNIGSG------NE 287 N+G+GN+GF N G+ N G NTN G+ G++G LN G G N Sbjct 504 PVDQPVMNSGFGNIGTGNSGFNNSGDANSGFQNTNTGAFFIGHSGLLNSGGGQHVGISNS 563 Query 288 GSG-NLGFGNAGDDNTGWGNS---------------GDTNTGGFNSGDLNTGI 324 G+G N G N G +NTG GNS GD ++GGFN+G+ +G Sbjct 564 GTGFNTGLFNTGFNNTGIGNSATNAAFTTTSGVANSGDNSSGGFNAGNDQSGF 616 >gi|254364419|ref|ZP_04980465.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] gi|134149933|gb|EBA41978.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] Length=681 Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust. Identities = 207/390 (54%), Positives = 246/390 (64%), Gaps = 24/390 (6%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NSA ++AGAGP PMLAAA AW GLA +L AAASFS + S L G +W Sbjct 4 MNFSVLPPEINSALMFAGAGPGPMLAAASAWTGLAGDLHSAAASFSAVTSQLATG---SW 60 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPA+AAM AA Y WL A A+AE AA A+AA + +EAA AAT HP V+ANR +L Sbjct 61 QGPASAAMTGVAASYARWLTTAAAQAEQAAGQAQAAVSAFEAALAATVHPGAVSANRGRL 120 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 SLV SNL GQN PAIAA EA YEQ+WA DVAAM+GYHG AS VA LTP+ P Sbjct 121 RSLVASNLLGQNAPAIAAVEAVYEQMWAADVAAMLGYHGEASAVALSLTPFTP-----SP 175 Query 181 VVTAAPAGAVGVPAALAIPALGVENIGVGNF------LGIGNIGNNNVGSGNTGDYNFGI 234 A P GAV + P L + N+ +G F LG+GN+G+ N GS NTG N G Sbjct 176 SAAATPGGAVIIAG---FPFLDLGNVTIGGFNLASGNLGLGNLGSFNPGSANTGSVNLGN 232 Query 235 GNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGF 294 NIG+ NLG+GNIG+ NLG GN G N G+GN G N+GSGN G N+G GN GS NLG Sbjct 233 ANIGDLNLGSGNIGSYNLGGGNTGDLNPGSGNTGTLNWGSGNIGSYNLGGGNLGSYNLGS 292 Query 295 GNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSP--VTQGVANSGFGNTGTGHSGFFNSGN 352 GN GD N G GN+G+ N GG N+G+ N G G+ V G N+G N G+G+ G N G Sbjct 293 GNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVNFGNGNTGDTNFGSGNLGSGNIGF 352 Query 353 SGSGFQNLGNGSS-----GFGNASDTSSGF 377 G N+G G+S GFG D GF Sbjct 353 GNKGSHNIGFGNSGNNNIGFGLTGDNQIGF 382 Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 101/230 (44%), Positives = 131/230 (57%), Gaps = 44/230 (19%) Query 202 GVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAGFFN 261 G NIG N LG GN+G+ N+GSGNTGD NFG GN GN N+G GN GN+N G GN G N Sbjct 271 GSGNIGSYN-LGGGNLGSYNLGSGNTGDTNFGGGNTGNLNVGGGNTGNSNFGFGNTGNVN 329 Query 262 FGNGNDGNTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGWG---------------- 305 FGNGN G+TNFGSGN G NIG GN+GS N+GFGN+G++N G+G Sbjct 330 FGNGNTGDTNFGSGNLGSGNIGFGNKGSHNIGFGNSGNNNIGFGLTGDNQIGFGALNSGS 389 Query 306 ------NSGDTNTGGFNSGDLNTGIGS----------------PVTQGVANSG-----FG 338 NSG+ N G FNSG+ N G+G+ + G NSG G Sbjct 390 GNLGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGNSGELSTGIG 449 Query 339 NTGTGHSGFFNSGNSGSGFQNLGNGSSGFGNASDTSSGFQNAGTALTRAS 388 N+G +G+FNS + +G+ N G ++G+ N+ T++G N+G L S Sbjct 450 NSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGS 499 Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 93/241 (39%), Positives = 119/241 (50%), Gaps = 57/241 (23%) Query 201 LGVENIGVGNFLGIGNIGNNNVGSGNTGDYNFGIGNIGNA--------------NLGNGN 246 G N G GN LG GN GN N+G N+G+ N G+GN GN + G GN Sbjct 382 FGALNSGSGN-LGFGNSGNGNIGFFNSGNNNIGMGNSGNGVGALSVEFGSSAERSSGFGN 440 Query 247 IGNANLGSGNAG-----FFN--------FGNG-------NDGNTNFGSGNAG-------- 278 G + G GN+G +FN F +G N G TN G GN+G Sbjct 441 SGELSTGIGNSGQLSTGWFNSATTSTGWFNSGTTNTGWFNSGTTNTGIGNSGGNLVTGSM 500 Query 279 ------FLNIGSGNEGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGV 332 N GS N GS N G N+G+ NTG+ NS + NTG FNSGDLNTG+ + V Q V Sbjct 501 GLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSDNINTGFFNSGDLNTGLFNSVNQPV 560 Query 333 ANSGFGNTGTGHSGFFNSGNSGSGFQN--------LGNGSSGFGNASDTSSGFQNAGTAL 384 NSG+ +TGT +SG+ N+G SGF N G+SG N + ++G N G L Sbjct 561 QNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNSGLANVGNYNAGIINVGDHL 620 Query 385 T 385 + Sbjct 621 S 621 Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 79/197 (41%), Positives = 99/197 (51%), Gaps = 22/197 (11%) Query 202 GVENIGVGNF---LGIGNIGNNNVGSGNTGDYNFGIGNIGNANLGNGNIGNANLGSGNAG 258 G N G+GN L G++G N G NTG +N G N G+ N GN N G N + N G Sbjct 482 GTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVNTGYFNSDNINTG 541 Query 259 FFNFGNGNDG---NTNFGSGNAGFLNIGSGNEGSGNLGFGNAGDDNTGW--------GNS 307 FFN G+ N G + N N+G+L+ G+ N G N G N+G DN GNS Sbjct 542 FFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNARDEHAEFVTGNS 601 Query 308 GDTNTGGFNSGDLNTGI-------GSPVTQGVAN-SGFGNTGTGHSGFFNSGNSGSGFQN 359 G N G +N+G +N G P G AN SGF N GT SGFFN G+ SGF N Sbjct 602 GLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGFFNFGSLMSGFAN 661 Query 360 LGNGSSGFGNASDTSSG 376 + SG+ N +SG Sbjct 662 FDDEVSGYLNGDSRASG 678 Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust. Identities = 76/212 (36%), Positives = 99/212 (47%), Gaps = 20/212 (9%) Query 216 NIGNNNVGSGNTGDYNFGIGNIG----NANLGNGNIGNANLGSGNAGFFNFGNGNDGNTN 271 N G N G N+G N GIGN G ++G N G+ N GS NAG N G+ N GN N Sbjct 470 NSGTTNTGWFNSGTTNTGIGNSGGNLVTGSMGLFNSGHTNTGSFNAGSMNTGDFNSGNVN 529 Query 272 FGSGNAGFLNIGSGNEGSGNLGFGNAGDD---NTGW-----GNSGDTNTGGFNSGDLNTG 323 G N+ +N G N G N G N+ + N+GW NSG N G FNSG N Sbjct 530 TGYFNSDNINTGFFNSGDLNTGLFNSVNQPVQNSGWLHTGTNNSGYANAGTFNSGFDNNA 589 Query 324 IGSPVTQGVANSGFGNTGTGHSGFFNSGNSGSGFQN-----LGNGS-SGFGNASDTSSGF 377 NSG N G ++G N G+ SGF+N G + SGF NA + SGF Sbjct 590 RDEHAEFVTGNSGLANVGNYNAGIINVGDHLSGFRNSVPTITGTANISGFVNAGTSISGF 649 Query 378 QNAGTALTRASSTWADSPRAWPIRAPSRLQVW 409 N G+ ++ ++ D + + SR W Sbjct 650 FNFGSLMSGFAN--FDDEVSGYLNGDSRASGW 679 >gi|183981566|ref|YP_001849857.1| PPE family protein [Mycobacterium marinum M] gi|183174892|gb|ACC40002.1| PPE family protein [Mycobacterium marinum M] Length=679 Score = 288 bits (736), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 225/397 (57%), Positives = 262/397 (66%), Gaps = 22/397 (5%) Query 1 MNFMVLPPEVNSARIYAGAGPAPMLAAAVAWDGLAAELGMAAASFSLLISGLTAGPGSAW 60 MNF VLPPE+NS RI+AG G PMLAAA AWDGLA EL AAA+FS + SGLT G +W Sbjct 1 MNFSVLPPEINSLRIFAGTGSGPMLAAAAAWDGLADELSTAAAAFSSVTSGLTGG---SW 57 Query 61 QGPAAAAMAAAAAPYLSWLNAATARAEGAAAGAKAAAAVYEAARAATAHPALVAANRNQL 120 QGPAAAAMAAAAAPY WL A ARA +A AK AA +EA RAAT HP LVAANR QL Sbjct 58 QGPAAAAMAAAAAPYAGWLGLAAARAGDVSAQAKVVAAAFEAVRAATVHPMLVAANRAQL 117 Query 121 LSLVLSNLFGQNLPAIAATEASYEQLWAQDVAAMVGYHGGASTVASQLTPWQQLLSVLPP 180 +SLV SNL G N PAIA TEA YE +WA DVAAMVGYHGGAS A+QL PWQQ L LP Sbjct 118 VSLVRSNLLGLNAPAIATTEAEYEAMWAADVAAMVGYHGGASAAAAQLAPWQQWLQSLPG 177 Query 181 VVTAAPAGAVGVPAALAIPALGV----ENIGVGNF----LGIGNIGNNNVGSGNTGDYNF 232 + A AA P LG+ N+G G+ LG GN GN N+GSGNTG+ N Sbjct 178 LPGQLAGSATAAAAANGWPNLGIGNTDSNVGSGDVGTQNLGSGNTGNTNLGSGNTGNGNL 237 Query 233 GIGNIGNANLGNGNIGNANLGSGNAGFFNFGNGNDGNTNFGSGNAGF------LNIGSGN 286 G GN G++N+G+GN+GN+N GSGN G +N G+GN G+ N G GNAG N G+GN Sbjct 238 GSGNRGDSNVGSGNLGNSNWGSGNTGNYNQGSGNHGDNNVGFGNAGLGGTAGNDNFGNGN 297 Query 287 EGSGNLGFGNAGDDNTGWGNSGDTNTGGFNSGDLNTGIGSPVTQGVANSGFGNTGTGHSG 346 GSGN G GN G+ N GWGN GD N G N G N G G+ G N GFGNTG+G+ G Sbjct 298 LGSGNTGSGNIGNQNQGWGNQGDNNVGLANRGSDNMGFGNT---GNNNVGFGNTGSGNIG 354 Query 347 FFNSGNSGSGFQNL--GNGSSGFGNASDTSSGFQNAG 381 +GN+ GF L G+G+ GFGN+ + GF N+G Sbjct 355 IGLTGNNQMGFGGLNSGSGNLGFGNSGTGNVGFFNSG 391 Lambda K H 0.312 0.129 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 912611074200 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40