BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0885 Length=340 Score E Sequences producing significant alignments: (Bits) Value gi|15608025|ref|NP_215400.1| hypothetical protein Rv0885 [Mycoba... 704 0.0 gi|323720594|gb|EGB29672.1| hypothetical protein TMMG_02874 [Myc... 704 0.0 gi|15840299|ref|NP_335336.1| hypothetical protein MT0908 [Mycoba... 703 0.0 gi|121636808|ref|YP_977031.1| hypothetical protein BCG_0937 [Myc... 702 0.0 gi|289573511|ref|ZP_06453738.1| conserved hypothetical protein [... 702 0.0 gi|308231661|ref|ZP_07413347.2| hypothetical protein TMAG_00821 ... 678 0.0 gi|240171953|ref|ZP_04750612.1| hypothetical protein MkanA1_2174... 640 0.0 gi|183984614|ref|YP_001852905.1| hypothetical protein MMAR_4647 ... 625 4e-177 gi|118466802|ref|YP_880272.1| hypothetical protein MAV_1013 [Myc... 624 8e-177 gi|342860497|ref|ZP_08717148.1| hypothetical protein MCOL_16521 ... 622 2e-176 gi|118616139|ref|YP_904471.1| hypothetical protein MUL_0265 [Myc... 621 4e-176 gi|41406922|ref|NP_959758.1| hypothetical protein MAP0824 [Mycob... 613 1e-173 gi|254773899|ref|ZP_05215415.1| hypothetical protein MaviaA2_043... 612 3e-173 gi|296169650|ref|ZP_06851268.1| conserved hypothetical protein [... 606 1e-171 gi|254823189|ref|ZP_05228190.1| hypothetical protein MintA_24889... 602 2e-170 gi|15828145|ref|NP_302408.1| transmembrane protein [Mycobacteriu... 595 4e-168 gi|145222310|ref|YP_001132988.1| hypothetical protein Mflv_1719 ... 577 7e-163 gi|326382406|ref|ZP_08204098.1| hypothetical protein SCNU_05691 ... 565 4e-159 gi|296163938|ref|ZP_06846574.1| conserved hypothetical protein [... 565 4e-159 gi|108801426|ref|YP_641623.1| hypothetical protein Mmcs_4463 [My... 558 4e-157 gi|120405981|ref|YP_955810.1| hypothetical protein Mvan_5032 [My... 558 6e-157 gi|333989451|ref|YP_004522065.1| hypothetical protein JDM601_081... 546 2e-153 gi|118469615|ref|YP_889915.1| hypothetical protein MSMEG_5682 [M... 533 1e-149 gi|289744615|ref|ZP_06503993.1| conserved hypothetical protein [... 490 1e-136 gi|169628026|ref|YP_001701675.1| hypothetical protein MAB_0929 [... 459 4e-127 gi|226309117|ref|YP_002769077.1| hypothetical protein RER_56300 ... 458 5e-127 gi|333990836|ref|YP_004523450.1| hypothetical protein JDM601_219... 444 8e-123 gi|296395409|ref|YP_003660293.1| hypothetical protein Srot_3037 ... 429 2e-118 gi|317509390|ref|ZP_07967009.1| hypothetical protein HMPREF9336_... 425 6e-117 gi|343925229|ref|ZP_08764756.1| hypothetical protein GOALK_038_0... 419 4e-115 gi|343926575|ref|ZP_08766078.1| hypothetical protein GOALK_062_0... 413 2e-113 gi|311743422|ref|ZP_07717228.1| conserved hypothetical protein [... 409 2e-112 gi|289446450|ref|ZP_06436194.1| LOW QUALITY PROTEIN: conserved h... 409 3e-112 gi|319949120|ref|ZP_08023213.1| hypothetical protein ES5_06922 [... 398 7e-109 gi|333918191|ref|YP_004491772.1| hypothetical protein AS9A_0515 ... 394 1e-107 gi|296140555|ref|YP_003647798.1| hypothetical protein Tpau_2861 ... 394 2e-107 gi|296139200|ref|YP_003646443.1| hypothetical protein Tpau_1477 ... 391 7e-107 gi|296140638|ref|YP_003647881.1| hypothetical protein Tpau_2944 ... 390 2e-106 gi|333918189|ref|YP_004491770.1| hypothetical protein AS9A_0513 ... 380 1e-103 gi|226307202|ref|YP_002767162.1| hypothetical protein RER_37150 ... 380 1e-103 gi|229493160|ref|ZP_04386952.1| conserved hypothetical protein [... 379 5e-103 gi|54023375|ref|YP_117617.1| hypothetical protein nfa14080 [Noca... 378 8e-103 gi|311742319|ref|ZP_07716128.1| conserved hypothetical protein [... 372 5e-101 gi|296138924|ref|YP_003646167.1| hypothetical protein Tpau_1197 ... 363 2e-98 gi|54024585|ref|YP_118827.1| hypothetical protein nfa26160 [Noca... 362 5e-98 gi|169629931|ref|YP_001703580.1| hypothetical protein MAB_2847c ... 362 6e-98 gi|333919408|ref|YP_004492989.1| hypothetical protein AS9A_1740 ... 359 5e-97 gi|326329870|ref|ZP_08196187.1| hypothetical protein NBCG_01301 ... 329 4e-88 gi|326329058|ref|ZP_08195387.1| hypothetical protein NBCG_00494 ... 307 2e-81 gi|326383780|ref|ZP_08205465.1| hypothetical protein SCNU_12622 ... 302 5e-80 >gi|15608025|ref|NP_215400.1| hypothetical protein Rv0885 [Mycobacterium tuberculosis H37Rv] gi|31792073|ref|NP_854566.1| hypothetical protein Mb0909 [Mycobacterium bovis AF2122/97] gi|148660662|ref|YP_001282185.1| hypothetical protein MRA_0892 [Mycobacterium tuberculosis H37Ra] 38 more sequence titles Length=340 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 340/340 (100%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH Sbjct 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 >gi|323720594|gb|EGB29672.1| hypothetical protein TMMG_02874 [Mycobacterium tuberculosis CDC1551A] Length=351 Score = 704 bits (1817), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 12 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 71 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 72 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 131 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 132 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 191 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW Sbjct 192 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 251 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 I+LYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH Sbjct 252 IALYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 311 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 312 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 351 >gi|15840299|ref|NP_335336.1| hypothetical protein MT0908 [Mycobacterium tuberculosis CDC1551] gi|254231193|ref|ZP_04924520.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|254363816|ref|ZP_04979862.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] gi|13880461|gb|AAK45150.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551] gi|124600252|gb|EAY59262.1| conserved hypothetical protein [Mycobacterium tuberculosis C] gi|134149330|gb|EBA41375.1| conserved hypothetical protein [Mycobacterium tuberculosis str. Haarlem] Length=340 Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 340/340 (100%), Gaps = 0/340 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 I+LYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH Sbjct 241 IALYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 >gi|121636808|ref|YP_977031.1| hypothetical protein BCG_0937 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989279|ref|YP_002643966.1| hypothetical protein JTY_0907 [Mycobacterium bovis BCG str. Tokyo 172] gi|121492455|emb|CAL70923.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772392|dbj|BAH25198.1| hypothetical protein JTY_0907 [Mycobacterium bovis BCG str. Tokyo 172] gi|341600824|emb|CCC63495.1| conserved hypothetical protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=340 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 339/340 (99%), Gaps = 0/340 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRL RMQRFW Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLIRMQRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH Sbjct 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 >gi|289573511|ref|ZP_06453738.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] gi|289537942|gb|EFD42520.1| conserved hypothetical protein [Mycobacterium tuberculosis K85] Length=340 Score = 702 bits (1811), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/340 (99%), Positives = 339/340 (99%), Gaps = 0/340 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRM RFW Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMHRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH Sbjct 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 >gi|308231661|ref|ZP_07413347.2| hypothetical protein TMAG_00821 [Mycobacterium tuberculosis SUMu001] gi|308370135|ref|ZP_07420412.2| hypothetical protein TMBG_01733 [Mycobacterium tuberculosis SUMu002] gi|308370525|ref|ZP_07421877.2| hypothetical protein TMCG_03142 [Mycobacterium tuberculosis SUMu003] 23 more sequence titles Length=327 Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/327 (100%), Positives = 327/327 (100%), Gaps = 0/327 (0%) Query 14 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 73 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW Sbjct 1 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 60 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC Sbjct 61 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 120 Query 134 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 193 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV Sbjct 121 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 180 Query 194 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 253 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC Sbjct 181 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 240 Query 254 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 313 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW Sbjct 241 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 300 Query 314 RLCKIDGKPSRYRSEPQRQHLAAAPAA 340 RLCKIDGKPSRYRSEPQRQHLAAAPAA Sbjct 301 RLCKIDGKPSRYRSEPQRQHLAAAPAA 327 >gi|240171953|ref|ZP_04750612.1| hypothetical protein MkanA1_21745 [Mycobacterium kansasii ATCC 12478] Length=341 Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/341 (90%), Positives = 324/341 (96%), Gaps = 1/341 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MD+TR+VRRWRRNM+V DD EYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDKTRMVRRWRRNMEVRDDTEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWY AQ ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYLAQPDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEM+NRVGADVPG+PRRLRWVSP +PLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMINRVGADVPGMPRRLRWVSPFIPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGK+LHPIMERVMSIHVAEEARHISFAHE+LRKRLP+LT+ QRFW Sbjct 181 AGEEPIDHTQKNVLREGKALHPIMERVMSIHVAEEARHISFAHEFLRKRLPQLTKRQRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 SLYFPLTMR LCNAIVVPPKAFWEEFDIPREVKKELFF SPESRKWL DMFAD RMLA+ Sbjct 241 TSLYFPLTMRMLCNAIVVPPKAFWEEFDIPREVKKELFFRSPESRKWLRDMFADVRMLAY 300 Query 301 DTGLMNP-IARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLM +ARL+WRLCKI+G+PSRYRSEPQRQH+A PAA Sbjct 301 DTGLMESRLARLMWRLCKINGEPSRYRSEPQRQHMATMPAA 341 >gi|183984614|ref|YP_001852905.1| hypothetical protein MMAR_4647 [Mycobacterium marinum M] gi|183177940|gb|ACC43050.1| conserved hypothetical protein [Mycobacterium marinum M] Length=341 Score = 625 bits (1611), Expect = 4e-177, Method: Compositional matrix adjust. Identities = 298/329 (91%), Positives = 314/329 (96%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP Sbjct 13 NMEVRDDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WYQAQS ER+I+IGMWRQANVAKVGLHFESIL+RGLMNYTFWMPNGSPEYRYCLHESVEE Sbjct 73 WYQAQSEERKIKIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNRVGADVPG+PRRLRW+SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRVGADVPGMPRRLRWISPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGK LHP+MERVM+IHVAEEARHISFAHE+LRKRLP+LT+ QRFWISLY PLTMRSL Sbjct 193 VLREGKLLHPVMERVMAIHVAEEARHISFAHEFLRKRLPKLTKRQRFWISLYLPLTMRSL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNP-IARL 311 NAI+VPPK FW EFDIPREVKKELFF SPESRKWL DMFAD RMLAHDTGLM ARL Sbjct 253 ANAILVPPKEFWAEFDIPREVKKELFFRSPESRKWLRDMFADVRMLAHDTGLMQTRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WR+CKIDG+PSRYRSEPQRQHLAA+PAA Sbjct 313 MWRICKIDGEPSRYRSEPQRQHLAASPAA 341 >gi|118466802|ref|YP_880272.1| hypothetical protein MAV_1013 [Mycobacterium avium 104] gi|118168089|gb|ABK68986.1| conserved hypothetical protein [Mycobacterium avium 104] Length=336 Score = 624 bits (1608), Expect = 8e-177, Method: Compositional matrix adjust. Identities = 297/336 (89%), Positives = 317/336 (95%), Gaps = 1/336 (0%) Query 6 IVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPAT 65 +VRRWRRNM+V DD +YV MLATLSEGSVRRNFNPYTDIDW+SPEFAVT++DPRWILPAT Sbjct 1 MVRRWRRNMEVRDDTDYVNMLATLSEGSVRRNFNPYTDIDWDSPEFAVTEDDPRWILPAT 60 Query 66 DPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYC 125 DPLGRHPWY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSPEYRYC Sbjct 61 DPLGRHPWYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSPEYRYC 120 Query 126 LHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEP 185 LHESVEECNHTMMFQEMVNRVGADVPG+PR L+W+SPL+PLVAGPLPVAFFIGVLAGEEP Sbjct 121 LHESVEECNHTMMFQEMVNRVGADVPGMPRLLKWISPLIPLVAGPLPVAFFIGVLAGEEP 180 Query 186 IDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYF 245 IDHTQKNVLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKRLP LT+ QRFW+SLY+ Sbjct 181 IDHTQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLPHLTKRQRFWVSLYY 240 Query 246 PLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLM 305 PLTMR LCNAI VPPK FW EFDIPREVKKELFF SPESRKWL DMFAD RMLAHDTGLM Sbjct 241 PLTMRLLCNAITVPPKQFWREFDIPREVKKELFFRSPESRKWLSDMFADVRMLAHDTGLM 300 Query 306 -NPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 N ARL+WRLCKI+GKPSRYRSEPQRQHLAA PAA Sbjct 301 ENRSARLMWRLCKINGKPSRYRSEPQRQHLAAVPAA 336 >gi|342860497|ref|ZP_08717148.1| hypothetical protein MCOL_16521 [Mycobacterium colombiense CECT 3035] gi|342132152|gb|EGT85393.1| hypothetical protein MCOL_16521 [Mycobacterium colombiense CECT 3035] Length=341 Score = 622 bits (1605), Expect = 2e-176, Method: Compositional matrix adjust. Identities = 296/341 (87%), Positives = 319/341 (94%), Gaps = 1/341 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 M RTR+VRRWR NM+V DDAEYV MLATLSEGSVRRNFNPYTDIDW+SPEFAVT+NDPRW Sbjct 1 MARTRLVRRWRSNMEVRDDAEYVNMLATLSEGSVRRNFNPYTDIDWDSPEFAVTENDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSP Sbjct 61 ILPATDPLGRHPWYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNR+GADVPG+PR L+W+SPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRIGADVPGMPRMLKWLSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKR+P LT+ QRFW Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRVPELTKRQRFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 +LY PLTM++LC AIVVPPKAFW EFDIPR+VKKELFF SPESRKWL DMF D RMLA+ Sbjct 241 TALYLPLTMKALCRAIVVPPKAFWREFDIPRDVKKELFFRSPESRKWLSDMFGDVRMLAY 300 Query 301 DTGLMNP-IARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DTGLM ARL+WRLCKI+GKPSRYRSEPQR+HLAA PAA Sbjct 301 DTGLMETRSARLMWRLCKINGKPSRYRSEPQREHLAAVPAA 341 >gi|118616139|ref|YP_904471.1| hypothetical protein MUL_0265 [Mycobacterium ulcerans Agy99] gi|118568249|gb|ABL03000.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=341 Score = 621 bits (1602), Expect = 4e-176, Method: Compositional matrix adjust. Identities = 297/329 (91%), Positives = 313/329 (96%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP Sbjct 13 NMEVRDDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WYQAQS ER+I+IGMWRQANVAKVGLHFESIL+RGLMNYTFWMPNGSPEYRYCLHESVEE Sbjct 73 WYQAQSEERKIKIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNRVGADV G+PRRLRW+SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRVGADVLGMPRRLRWISPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGK LHP+MERVM+IHVAEEARHISFAHE+LRKRLP+LT+ QRFWISLY PLTMRSL Sbjct 193 VLREGKLLHPVMERVMAIHVAEEARHISFAHEFLRKRLPKLTKRQRFWISLYLPLTMRSL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNP-IARL 311 NAI+VPPK FW EFDIPREVKKELFF SPESRKWL DMFAD RMLAHDTGLM ARL Sbjct 253 ANAILVPPKEFWAEFDIPREVKKELFFRSPESRKWLRDMFADVRMLAHDTGLMQTRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WR+CKIDG+PSRYRSEPQRQHLAA+PAA Sbjct 313 MWRICKIDGEPSRYRSEPQRQHLAASPAA 341 >gi|41406922|ref|NP_959758.1| hypothetical protein MAP0824 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395272|gb|AAS03141.1| hypothetical protein MAP_0824 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461235|gb|EGO40110.1| P-aminobenzoate N-oxygenase AurF [Mycobacterium avium subsp. paratuberculosis S397] Length=341 Score = 613 bits (1581), Expect = 1e-173, Method: Compositional matrix adjust. Identities = 292/329 (89%), Positives = 310/329 (95%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DD EYV MLATLSEGSVRRNFNPYTDIDW+SPEFAVT++DPRWILPATDPLGRHP Sbjct 13 NMEVRDDTEYVNMLATLSEGSVRRNFNPYTDIDWDSPEFAVTEDDPRWILPATDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSPEYRYCLHESVEE Sbjct 73 WYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNRVGADVPG+PR L+W+SPL+PLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRVGADVPGMPRLLKWISPLIPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKRLP LT+ QRFW+SLY+PLTMR L Sbjct 193 VLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLPHLTKRQRFWVSLYYPLTMRLL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLM-NPIARL 311 CNAI VPPK FW EFDIPREVKKELFF SPESRKWL DMFAD RMLAHDTGLM N ARL Sbjct 253 CNAITVPPKQFWREFDIPREVKKELFFRSPESRKWLSDMFADVRMLAHDTGLMENRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WRLCKI+GKPSRYRSEPQRQHLAA PAA Sbjct 313 MWRLCKINGKPSRYRSEPQRQHLAAVPAA 341 >gi|254773899|ref|ZP_05215415.1| hypothetical protein MaviaA2_04382 [Mycobacterium avium subsp. avium ATCC 25291] Length=341 Score = 612 bits (1578), Expect = 3e-173, Method: Compositional matrix adjust. Identities = 291/329 (89%), Positives = 310/329 (95%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DD +YV MLATLSEGSVRRNFNPYTDIDW+SPEFAVT++DPRWILPATDPLGRHP Sbjct 13 NMEVRDDTDYVNMLATLSEGSVRRNFNPYTDIDWDSPEFAVTEDDPRWILPATDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSPEYRYCLHESVEE Sbjct 73 WYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNRVGADVPG+PR L+W+SPL+PLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRVGADVPGMPRLLKWISPLIPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKRLP LT+ QRFW+SLY+PLTMR L Sbjct 193 VLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLPHLTKRQRFWVSLYYPLTMRLL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLM-NPIARL 311 CNAI VPPK FW EFDIPREVKKELFF SPESRKWL DMFAD RMLAHDTGLM N ARL Sbjct 253 CNAITVPPKQFWREFDIPREVKKELFFRSPESRKWLSDMFADVRMLAHDTGLMENRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WRLCKI+GKPSRYRSEPQRQHLAA PAA Sbjct 313 MWRLCKINGKPSRYRSEPQRQHLAAVPAA 341 >gi|296169650|ref|ZP_06851268.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895647|gb|EFG75343.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=341 Score = 606 bits (1563), Expect = 1e-171, Method: Compositional matrix adjust. Identities = 288/329 (88%), Positives = 307/329 (94%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DD EYV LATLSEGSVRRNFNPYTDIDWESPEFAVT+NDPRWILP TDPLGRHP Sbjct 13 NMEVRDDTEYVNTLATLSEGSVRRNFNPYTDIDWESPEFAVTENDPRWILPTTDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSPEYRYCLHESVEE Sbjct 73 WYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNRVGADVPG+PR L+W+SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRVGADVPGMPRLLKWLSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGKSLHPIMERVM+IHVAEEARHISFAHE+LR+R+P+LT+ QRFW +LY PLTM+ L Sbjct 193 VLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRRRVPQLTKRQRFWTALYLPLTMKLL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNP-IARL 311 C AIVVPPKAFW+EFDIPREV+KELFF SPESRKWL DMF D RMLAHDTGLM ARL Sbjct 253 CRAIVVPPKAFWQEFDIPREVRKELFFRSPESRKWLSDMFGDVRMLAHDTGLMETRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WRLCKIDGKPSRYRSEPQRQHLAA PAA Sbjct 313 MWRLCKIDGKPSRYRSEPQRQHLAAVPAA 341 >gi|254823189|ref|ZP_05228190.1| hypothetical protein MintA_24889 [Mycobacterium intracellulare ATCC 13950] Length=341 Score = 602 bits (1552), Expect = 2e-170, Method: Compositional matrix adjust. Identities = 286/329 (87%), Positives = 308/329 (94%), Gaps = 1/329 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NM+V DDA+YV MLATLSEGSVRRNFNPYTDIDW+SPEFAVT+NDPRWILP TDPLGRHP Sbjct 13 NMEVRDDADYVNMLATLSEGSVRRNFNPYTDIDWDSPEFAVTENDPRWILPETDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WY AQS ER+I+IGMWRQANVAKVGLHFESILIRGLMNYTFW+PNGSPEYRYCLHESVEE Sbjct 73 WYLAQSDERKIKIGMWRQANVAKVGLHFESILIRGLMNYTFWVPNGSPEYRYCLHESVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNR+GADVPG+PR L+W+SPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRIGADVPGMPRMLKWLSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKR+P LT+ QRFW +LY PLTM+ L Sbjct 193 VLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRVPELTKRQRFWTALYLPLTMKVL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMN-PIARL 311 C AIVVPPKAFW+EFDIPREVKKELFF SPESRKWL DMF D RMLA+DTGLM ARL Sbjct 253 CRAIVVPPKAFWQEFDIPREVKKELFFRSPESRKWLSDMFGDVRMLAYDTGLMEMRSARL 312 Query 312 VWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 +WRLCKI+GKPSRYRSEPQRQHLA+ PAA Sbjct 313 MWRLCKINGKPSRYRSEPQRQHLASVPAA 341 >gi|15828145|ref|NP_302408.1| transmembrane protein [Mycobacterium leprae TN] gi|221230622|ref|YP_002504038.1| putative transmembrane protein [Mycobacterium leprae Br4923] gi|2440105|emb|CAB16678.1| hypothetical protein MLCB57.38 [Mycobacterium leprae] gi|13093699|emb|CAC31090.1| possible transmembrane protein [Mycobacterium leprae] gi|219933729|emb|CAR72232.1| possible transmembrane protein [Mycobacterium leprae Br4923] Length=341 Score = 595 bits (1534), Expect = 4e-168, Method: Compositional matrix adjust. Identities = 286/341 (84%), Positives = 307/341 (91%), Gaps = 1/341 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 M RTR+VRRWR NM+V DD +YV ML TLSEGSVRRNFNPYTDIDWESP FAV DNDPRW Sbjct 1 MARTRMVRRWRNNMEVRDDTDYVGMLTTLSEGSVRRNFNPYTDIDWESPAFAVKDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILP TDPLGRHPWY AQ +R+IEIGMWRQANVAKVGLHFESIL+RGLMNYTFWMPNGSP Sbjct 61 ILPDTDPLGRHPWYLAQPEQRKIEIGMWRQANVAKVGLHFESILVRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHE VEECNHTMMFQEMVNRVGADVPG+PRRLRW+SPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHECVEECNHTMMFQEMVNRVGADVPGMPRRLRWLSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDH QKNVLREGKSLHPIMERVM+IHVAEEARHISFAHE+LRKRL LT+ Q FW Sbjct 181 AGEEPIDHMQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEFLRKRLTHLTKRQLFW 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 +SLY+PLTMR LCNAI+VPPKAFW+EF+IPREVKKELFF SPESRK L D+FAD RMLA+ Sbjct 241 VSLYYPLTMRVLCNAIMVPPKAFWQEFNIPREVKKELFFRSPESRKLLRDIFADVRMLAY 300 Query 301 DTGLMNP-IARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 DT LM ARL+W +CKIDG+PSRYR EPQRQH A AA Sbjct 301 DTRLMETRSARLMWHICKIDGQPSRYRGEPQRQHPATTSAA 341 >gi|145222310|ref|YP_001132988.1| hypothetical protein Mflv_1719 [Mycobacterium gilvum PYR-GCK] gi|315442744|ref|YP_004075623.1| hypothetical protein Mspyr1_11050 [Mycobacterium sp. Spyr1] gi|145214796|gb|ABP44200.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261047|gb|ADT97788.1| hypothetical protein Mspyr1_11050 [Mycobacterium sp. Spyr1] Length=342 Score = 577 bits (1488), Expect = 7e-163, Method: Compositional matrix adjust. Identities = 264/335 (79%), Positives = 299/335 (90%), Gaps = 0/335 (0%) Query 3 RTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWIL 62 RTR++RRWR+NMDV DDA+YVE L LSEGSVRRNFNPYTDIDW+SPEFAV ND RWIL Sbjct 7 RTRMIRRWRKNMDVTDDAQYVETLTALSEGSVRRNFNPYTDIDWDSPEFAVVPNDERWIL 66 Query 63 PATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEY 122 P TDP+G+HPWY+AQ ERQIEIGMWRQANVAKVGLHFESILIRGLMNY FW+PNGSPEY Sbjct 67 PGTDPIGQHPWYRAQPLERQIEIGMWRQANVAKVGLHFESILIRGLMNYAFWVPNGSPEY 126 Query 123 RYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAG 182 RYCLHESVEECNHT+MFQEMVNR+GADVPG+PR L+W+S +PL AGPLP+ FF GVLAG Sbjct 127 RYCLHESVEECNHTLMFQEMVNRIGADVPGMPRVLKWLSQFIPLAAGPLPIPFFFGVLAG 186 Query 183 EEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWIS 242 EEPIDHTQKNVLREGKSLHPIMERVM+IHVAEEARHISFAHEYLRKR+P L R Q+F +S Sbjct 187 EEPIDHTQKNVLREGKSLHPIMERVMAIHVAEEARHISFAHEYLRKRVPHLNRRQKFLLS 246 Query 243 LYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDT 302 L P+ MR LC AI+VPPK+FW+EFDIPR VKKE+FFG+PE+R++L DMF D RML HDT Sbjct 247 LNVPIIMRVLCQAIIVPPKSFWKEFDIPRSVKKEIFFGTPEARQFLRDMFGDVRMLCHDT 306 Query 303 GLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAA 337 GLMNP+A+L+WR+C+IDG PSRYRSEP R H+ A Sbjct 307 GLMNPVAKLMWRICRIDGPPSRYRSEPARGHVVTA 341 >gi|326382406|ref|ZP_08204098.1| hypothetical protein SCNU_05691 [Gordonia neofelifaecis NRRL B-59395] gi|326199136|gb|EGD56318.1| hypothetical protein SCNU_05691 [Gordonia neofelifaecis NRRL B-59395] Length=338 Score = 565 bits (1456), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 259/337 (77%), Positives = 298/337 (89%), Gaps = 0/337 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 M RT I++RWR NMDV DD Y +ML TLSEGSVRR+FNPY DIDW++PEFAVT ND RW Sbjct 1 MARTGIIKRWRSNMDVLDDTVYTDMLNTLSEGSVRRHFNPYIDIDWDAPEFAVTPNDERW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILP TDPLGRHPWYQAQ+ ERQIEIGMWRQANVAKVGLHFE +LIRGLM+Y FW PNGSP Sbjct 61 ILPGTDPLGRHPWYQAQAVERQIEIGMWRQANVAKVGLHFELVLIRGLMDYAFWTPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHE+ EECNHTMMFQEMVNR+G DVPG+PR LRW P+VPL+AGPLP+ F+ G+L Sbjct 121 EYRYCLHEAAEECNHTMMFQEMVNRIGVDVPGMPRLLRWSQPVVPLMAGPLPIPFWFGIL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFW 240 AGEEPIDHTQKNVLREGK LHPIMERVM+IHVAEEARHISFAHEYLRKR+P L+R +RF Sbjct 181 AGEEPIDHTQKNVLREGKQLHPIMERVMAIHVAEEARHISFAHEYLRKRVPHLSRGKRFL 240 Query 241 ISLYFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAH 300 +S++ P+ MR LC+AI+VPP+ FW+EFDIPR V+KE+FF SPESR+ L DMF D RML H Sbjct 241 LSMFVPVMMRVLCSAIMVPPREFWKEFDIPRSVRKEVFFNSPESRQTLRDMFGDVRMLCH 300 Query 301 DTGLMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAA 337 DTGL+NP+A++VWR+CKIDGKPSRYRSEPQRQH++A Sbjct 301 DTGLINPLAKIVWRICKIDGKPSRYRSEPQRQHVSAV 337 >gi|296163938|ref|ZP_06846574.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900719|gb|EFG80089.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=342 Score = 565 bits (1455), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 262/325 (81%), Positives = 291/325 (90%), Gaps = 0/325 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NMDV DDAEY ++L LSEGSVRRNFNPY DIDW +PE+AV DNDPRW LPATDPLGRHP Sbjct 17 NMDVLDDAEYADVLRVLSEGSVRRNFNPYIDIDWTAPEYAVVDNDPRWKLPATDPLGRHP 76 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WYQAQS ERQI IGMWRQANVAKVGLHFES+LIRGLM Y FW+PNGSPEYRYCLHE+VEE Sbjct 77 WYQAQSEERQIRIGMWRQANVAKVGLHFESVLIRGLMGYAFWVPNGSPEYRYCLHEAVEE 136 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVN +GADVPG+ R+L+W+SPL+PLVA PLP+ F+ G+LAGEEPIDHTQKN Sbjct 137 CNHTMMFQEMVNHIGADVPGMRRQLKWLSPLIPLVASPLPIPFWFGILAGEEPIDHTQKN 196 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGK LHPIMERVMSIHVAEEARHISFAHEYLRKR+P L R +RFW+SLY P+ MR Sbjct 197 VLREGKELHPIMERVMSIHVAEEARHISFAHEYLRKRVPHLPRRKRFWLSLYVPVIMRVA 256 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLV 312 C+AIVVPPKAFW+EFDIPREV+K++FFGS ESRK L DMF D RML +DTGLMNPIAR+V Sbjct 257 CSAIVVPPKAFWQEFDIPREVRKQVFFGSLESRKALRDMFGDVRMLCYDTGLMNPIARMV 316 Query 313 WRLCKIDGKPSRYRSEPQRQHLAAA 337 WR+CKI+GKPSRYR EPQRQHL A Sbjct 317 WRICKINGKPSRYRCEPQRQHLVAV 341 >gi|108801426|ref|YP_641623.1| hypothetical protein Mmcs_4463 [Mycobacterium sp. MCS] gi|119870579|ref|YP_940531.1| hypothetical protein Mkms_4550 [Mycobacterium sp. KMS] gi|126437411|ref|YP_001073102.1| hypothetical protein Mjls_4846 [Mycobacterium sp. JLS] gi|108771845|gb|ABG10567.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696668|gb|ABL93741.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237211|gb|ABO00612.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=338 Score = 558 bits (1439), Expect = 4e-157, Method: Compositional matrix adjust. Identities = 258/325 (80%), Positives = 288/325 (89%), Gaps = 0/325 (0%) Query 13 NMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHP 72 NMDV +D YV+ L TLSEGSVRRNFNPYTDIDW SPEFAV D+D RWIL +TDPLGRHP Sbjct 13 NMDVTEDKAYVDTLTTLSEGSVRRNFNPYTDIDWNSPEFAVVDDDERWILTSTDPLGRHP 72 Query 73 WYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEE 132 WYQAQ ERQIEIG WRQANVAKVGL FE ILIRGL NY FW+PNGSPEYRYC+HE+VEE Sbjct 73 WYQAQPVERQIEIGRWRQANVAKVGLQFEIILIRGLTNYAFWVPNGSPEYRYCMHETVEE 132 Query 133 CNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKN 192 CNHTMMFQEMVNR+GADVPG+PR LRW+SP +PLVAGPLP+ FF GVLAGEEPIDHTQKN Sbjct 133 CNHTMMFQEMVNRIGADVPGMPRLLRWLSPFIPLVAGPLPIPFFFGVLAGEEPIDHTQKN 192 Query 193 VLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSL 252 VLREGK+LHPIMERVM+IHVAEEARHISFAHEYLRKRLP L R QRF++SLY P+ MR L Sbjct 193 VLREGKALHPIMERVMAIHVAEEARHISFAHEYLRKRLPHLPRRQRFFLSLYVPVVMRVL 252 Query 253 CNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLV 312 C AI+VPPK+FW EFDIP+ VKKELFF +PESR++L DMF D RML DTGLMNP+A+L+ Sbjct 253 CQAIIVPPKSFWREFDIPKSVKKELFFRAPESRQFLRDMFGDVRMLCQDTGLMNPLAKLM 312 Query 313 WRLCKIDGKPSRYRSEPQRQHLAAA 337 WR+C+IDG+PSRYRSEP RQH+A A Sbjct 313 WRICRIDGRPSRYRSEPHRQHVATA 337 >gi|120405981|ref|YP_955810.1| hypothetical protein Mvan_5032 [Mycobacterium vanbaalenii PYR-1] gi|119958799|gb|ABM15804.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=345 Score = 558 bits (1437), Expect = 6e-157, Method: Compositional matrix adjust. Identities = 259/328 (79%), Positives = 291/328 (89%), Gaps = 3/328 (0%) Query 13 NMDVAD---DAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLG 69 NM++ D D YVE LATLSEGSVRRNFNPYTDIDW+SPEFAVT +D RWILP TDP G Sbjct 17 NMEIGDGPEDRAYVEKLATLSEGSVRRNFNPYTDIDWDSPEFAVTPDDERWILPDTDPFG 76 Query 70 RHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHES 129 HPWYQ+Q R++QIEIGMWRQANVAKVGLHFESILIRGLMNY FW+PNGSPEYRYCLHES Sbjct 77 GHPWYQSQPRQKQIEIGMWRQANVAKVGLHFESILIRGLMNYAFWVPNGSPEYRYCLHES 136 Query 130 VEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHT 189 VEECNHTMMFQEMVNR+GADVPG+PR L+W+S +PLVAGPLP+ FF GVLAGEEPIDHT Sbjct 137 VEECNHTMMFQEMVNRIGADVPGMPRLLKWLSQFIPLVAGPLPIPFFFGVLAGEEPIDHT 196 Query 190 QKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTM 249 QKNVLREG+SLHPIMERVM+IHVAEEARHISFAHEYLRKR+P L R QRF +SL P+ M Sbjct 197 QKNVLREGRSLHPIMERVMAIHVAEEARHISFAHEYLRKRVPNLNRRQRFLLSLNVPIIM 256 Query 250 RSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIA 309 R LC AI+VPPK+FW+EFDIPR VKKE+FFG+PE+R++L DMF D RML HDTGLMNP A Sbjct 257 RVLCQAIIVPPKSFWKEFDIPRSVKKEIFFGTPEARQFLRDMFGDVRMLCHDTGLMNPFA 316 Query 310 RLVWRLCKIDGKPSRYRSEPQRQHLAAA 337 +L+WR+CKIDG PSRYRSEP RQH+ +A Sbjct 317 KLMWRICKIDGPPSRYRSEPARQHVVSA 344 >gi|333989451|ref|YP_004522065.1| hypothetical protein JDM601_0811 [Mycobacterium sp. JDM601] gi|333485419|gb|AEF34811.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=325 Score = 546 bits (1407), Expect = 2e-153, Method: Compositional matrix adjust. Identities = 245/322 (77%), Positives = 291/322 (91%), Gaps = 0/322 (0%) Query 14 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 73 MDV+DD YV+ML TLSEGSVRR+FNPY DIDW+SPEF V DNDPRWILPATDPLG+H W Sbjct 1 MDVSDDTAYVDMLNTLSEGSVRRHFNPYLDIDWDSPEFKVFDNDPRWILPATDPLGKHAW 60 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 YQAQ ERQI+IGMWRQANVAKVGLHFESILIRGL+NY FW+PNGSPEYRYCLHESVEEC Sbjct 61 YQAQPEERQIKIGMWRQANVAKVGLHFESILIRGLLNYAFWVPNGSPEYRYCLHESVEEC 120 Query 134 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 193 NHT+MFQEMVN +GADVPG+PR L+W++ +PLVAGPLP+ F+ G+LAGEEPIDH QK++ Sbjct 121 NHTLMFQEMVNHIGADVPGMPRFLKWLAAFIPLVAGPLPIPFWFGILAGEEPIDHIQKDI 180 Query 194 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 253 LREGK+LHPIME+VM+IHVAEEARHISFAHEYL KR+P L R +RFW+SL+ P+TMR LC Sbjct 181 LREGKTLHPIMEKVMAIHVAEEARHISFAHEYLNKRVPNLPRRKRFWLSLFVPVTMRILC 240 Query 254 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 313 +AIVVPPKAFW+EFDIPR V+K++FFGS ++R+ L DMFAD RML HDTGLMNP+A+L+W Sbjct 241 SAIVVPPKAFWQEFDIPRSVRKDVFFGSADARRMLSDMFADVRMLCHDTGLMNPVAKLIW 300 Query 314 RLCKIDGKPSRYRSEPQRQHLA 335 R+C+I+G PSR+R++PQR HL+ Sbjct 301 RMCRINGAPSRFRAQPQRAHLS 322 >gi|118469615|ref|YP_889915.1| hypothetical protein MSMEG_5682 [Mycobacterium smegmatis str. MC2 155] gi|118170902|gb|ABK71798.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=325 Score = 533 bits (1373), Expect = 1e-149, Method: Compositional matrix adjust. Identities = 252/324 (78%), Positives = 290/324 (90%), Gaps = 0/324 (0%) Query 14 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 73 MDV+DD +YV+ML TLSEGSVRRNFNPY DIDW+SPEFAV ND RW+L TDPLGRHPW Sbjct 1 MDVSDDTQYVDMLTTLSEGSVRRNFNPYQDIDWDSPEFAVIPNDTRWVLTDTDPLGRHPW 60 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 Y+AQS ERQIEIGMWRQANVAKVGLHFE+ILIRGLM Y+FW+PNGSPEYRYCLHE+VEEC Sbjct 61 YRAQSLERQIEIGMWRQANVAKVGLHFENILIRGLMEYSFWVPNGSPEYRYCLHEAVEEC 120 Query 134 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 193 NHT+MFQEMVNR+G DVPG+PR LRW+ P++PL AGP P+ FF GVLAGEEPIDHTQK+V Sbjct 121 NHTLMFQEMVNRIGKDVPGMPRLLRWLQPVIPLAAGPTPIPFFFGVLAGEEPIDHTQKSV 180 Query 194 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 253 LREG+ LHPIMERVM+IHVAEEARHISFAH+YL KR+PRL R QRF +SLY PL MR LC Sbjct 181 LREGRKLHPIMERVMAIHVAEEARHISFAHQYLHKRVPRLRRRQRFMLSLYVPLVMRILC 240 Query 254 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 313 +AI+VPP+ FW+EFDIPR V+KE+FF +PESRK L DMF+D RML +DTGLMNP+A+LVW Sbjct 241 SAILVPPRPFWKEFDIPRSVRKEVFFRAPESRKMLRDMFSDVRMLCYDTGLMNPVAKLVW 300 Query 314 RLCKIDGKPSRYRSEPQRQHLAAA 337 ++CKIDG PSRYRSEPQR+HL +A Sbjct 301 KICKIDGPPSRYRSEPQREHLVSA 324 >gi|289744615|ref|ZP_06503993.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] gi|289685143|gb|EFD52631.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987] Length=246 Score = 490 bits (1261), Expect = 1e-136, Method: Compositional matrix adjust. Identities = 236/239 (99%), Positives = 237/239 (99%), Gaps = 0/239 (0%) Query 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW Sbjct 1 MDRTRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRW 60 Query 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP Sbjct 61 ILPATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSP 120 Query 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL Sbjct 121 EYRYCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVL 180 Query 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRF 239 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTR+ F Sbjct 181 AGEEPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRITSF 239 >gi|169628026|ref|YP_001701675.1| hypothetical protein MAB_0929 [Mycobacterium abscessus ATCC 19977] gi|169239993|emb|CAM61021.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=351 Score = 459 bits (1180), Expect = 4e-127, Method: Compositional matrix adjust. Identities = 218/335 (66%), Positives = 266/335 (80%), Gaps = 3/335 (0%) Query 9 RWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDP 67 + R +V DA+YV++L TLS GS RNF+P+ DIDW+SPE+AV ND RW+LP TDP Sbjct 6 KLRAKKEVRGDAKYVQVLETLSHGSTNRNFDPFIDIDWDSPEYAVVPNDTRWVLPHRTDP 65 Query 68 LGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLH 127 LGRHPWYQ+Q E+QIEIGMWRQANVAKVGLHFESILIRGL+ Y F +PNGSPE+RY H Sbjct 66 LGRHPWYQSQPLEKQIEIGMWRQANVAKVGLHFESILIRGLIQYAFSVPNGSPEFRYLNH 125 Query 128 ESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPID 187 ES+EECNHT+MFQEMVNR+G DVPG+PR LRW+SP +PL + P FFIGVLAGEEPID Sbjct 126 ESIEECNHTLMFQEMVNRLGVDVPGMPRLLRWLSPFIPLASTVAPETFFIGVLAGEEPID 185 Query 188 HTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPL 247 HTQKNVLREG +LHPIM RVM IHVAEEARHISFAHEYL KR+P + RF +S+ P+ Sbjct 186 HTQKNVLREGDNLHPIMRRVMEIHVAEEARHISFAHEYLHKRVPTMHWFNRFVLSISTPI 245 Query 248 TMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNP 307 MR L AI+ PP++F+++F IP +V+KE+F+ SP SR+ + ++F+D RML G+MNP Sbjct 246 IMRVLMGAIMTPPRSFFKKFGIPDDVRKEIFWKSPASRQTMSEVFSDVRMLCRGVGMMNP 305 Query 308 IARLVWRLCKIDGKPSRYRSEPQRQHLA--AAPAA 340 IA+LVWR+ IDG+ +RYRSEPQR L AAP A Sbjct 306 IAKLVWRVLHIDGRAARYRSEPQRGPLVNYAAPEA 340 >gi|226309117|ref|YP_002769077.1| hypothetical protein RER_56300 [Rhodococcus erythropolis PR4] gi|229491821|ref|ZP_04385642.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|226188234|dbj|BAH36338.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] gi|229321502|gb|EEN87302.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=335 Score = 458 bits (1179), Expect = 5e-127, Method: Compositional matrix adjust. Identities = 216/323 (67%), Positives = 259/323 (81%), Gaps = 2/323 (0%) Query 17 ADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGRHPWYQ 75 A D Y E L LSEGSV ++F+PY DIDW+SPEFAV ND RWILPA TDPLG HPWYQ Sbjct 13 ASDDSYNETLRLLSEGSVHKHFDPYLDIDWDSPEFAVVPNDRRWILPAETDPLGAHPWYQ 72 Query 76 AQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNH 135 +QS RQIEIGMWRQANVAKVGL FE+ILIRG+M Y F +PN S E RYC HESVEECNH Sbjct 73 SQSEARQIEIGMWRQANVAKVGLQFENILIRGMMQYVFSLPNDSAEARYCTHESVEECNH 132 Query 136 TMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLR 195 TMMFQEMVNR+GAD PG+ R ++ ++P +PL AGP P FF+GVLAGEEPIDH QK++LR Sbjct 133 TMMFQEMVNRIGADAPGMSRPMKMLAPFIPLAAGPFPELFFVGVLAGEEPIDHIQKSILR 192 Query 196 EGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNA 255 G +HPIM+ VM+IHVAEEARHISFAH+ L +R+P ++R RF +SL FP+ MR LC+A Sbjct 193 AGGQIHPIMQSVMAIHVAEEARHISFAHKLLSRRIPLMSRPNRFVLSLLFPIVMRILCDA 252 Query 256 IVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRL 315 IV+PPK+FW++FDIP+ VKK+LF+ PESR+ L + F D RMLA DTGLMN +RLVW+ Sbjct 253 IVIPPKSFWKQFDIPKSVKKDLFWDLPESRQTLRNYFGDVRMLATDTGLMNRASRLVWKA 312 Query 316 CKIDGKPSRYRSEPQR-QHLAAA 337 CK+DG+ SR+RSEP R H AAA Sbjct 313 CKMDGRASRFRSEPHRSSHNAAA 335 >gi|333990836|ref|YP_004523450.1| hypothetical protein JDM601_2196 [Mycobacterium sp. JDM601] gi|333486804|gb|AEF36196.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=361 Score = 444 bits (1143), Expect = 8e-123, Method: Compositional matrix adjust. Identities = 208/337 (62%), Positives = 258/337 (77%), Gaps = 1/337 (0%) Query 4 TRIVRRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILP 63 R + R+RRNMDV DD +Y+ LA LSE SVRR F+P+TDI+W++PE+A+T +DPRW+L Sbjct 25 VRAMARYRRNMDVTDDTQYMATLANLSESSVRRRFDPFTDIEWDAPEYAITPDDPRWVL- 83 Query 64 ATDPLGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYR 123 DPL R WY++Q +QIEIGMWRQAN+AKV L FES+LIRGL+ Y +PNGSPE+R Sbjct 84 KDDPLARTSWYRSQPLSKQIEIGMWRQANIAKVTLQFESMLIRGLVQYASRVPNGSPEHR 143 Query 124 YCLHESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGE 183 YCLHESVEECNH +MFQE+VNR+G DVPG+ +RW+SPL+PL AGP P FF GVLAGE Sbjct 144 YCLHESVEECNHVLMFQELVNRIGFDVPGMQWWMRWLSPLMPLYAGPFPNVFFFGVLAGE 203 Query 184 EPIDHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISL 243 P+D Q N LRE S HP++E+VM+IH+AEEARHISFA YLRKR+P++ R+ R W+S+ Sbjct 204 VPVDVLQTNALREAGSGHPVVEKVMAIHIAEEARHISFADAYLRKRVPKVWRINRLWMSV 263 Query 244 YFPLTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTG 303 Y P MR L +V PP+ F+ +F++PR V+K+L GSPESR+ L D FAD RML D G Sbjct 264 YVPFVMRLLAKPMVQPPRRFFRQFEVPRSVRKQLQVGSPESRQTLRDTFADIRMLCGDIG 323 Query 304 LMNPIARLVWRLCKIDGKPSRYRSEPQRQHLAAAPAA 340 LM P RL+WRLCKIDG PSRYR EPQR LAA A Sbjct 324 LMTPAGRLMWRLCKIDGAPSRYRGEPQRTQLAAQVTA 360 >gi|296395409|ref|YP_003660293.1| hypothetical protein Srot_3037 [Segniliparus rotundus DSM 44985] gi|296182556|gb|ADG99462.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985] Length=342 Score = 429 bits (1104), Expect = 2e-118, Method: Compositional matrix adjust. Identities = 203/328 (62%), Positives = 250/328 (77%), Gaps = 1/328 (0%) Query 8 RRWRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDP 67 R W +D D Y E LATLSEGSVRR+FNP+TDIDW+SPEFAVT NDPRWILP DP Sbjct 4 RTWLAELDPVADEAYCERLATLSEGSVRRSFNPFTDIDWDSPEFAVTPNDPRWILPHADP 63 Query 68 LGRHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLH 127 + R WYQ+ S E+QIE+GMWRQA VAK GL FE LI+G++ Y +PNGSPEYRYC H Sbjct 64 IARTDWYQSLSEEQQIEVGMWRQATVAKTGLQFEVALIQGMVRYAVSLPNGSPEYRYCTH 123 Query 128 ESVEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPL-PVAFFIGVLAGEEPI 186 E EECNH MFQEMVNR+G V G+ R ++++ V L P AFF VLAGEEPI Sbjct 124 EVAEECNHNQMFQEMVNRIGVPVTGMGRFHQFLTSYGAQVLAELSPSAFFASVLAGEEPI 183 Query 187 DHTQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFP 246 D+ QK +LREGK+LHPIME VM+IH+AEEARHISFAHE+L+ R PR +R++RF +SL +P Sbjct 184 DYVQKAILREGKALHPIMEHVMAIHIAEEARHISFAHEFLKLRTPRASRLKRFALSLAYP 243 Query 247 LTMRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMN 306 L MR + IVVPPK+FW+ FDIP+ VKKE+F+ S ESR + + AD+R LAH+ G+MN Sbjct 244 LIMRYVEELIVVPPKSFWDRFDIPKSVKKEIFWQSEESRDFRRRLLADSRALAHEMGIMN 303 Query 307 PIARLVWRLCKIDGKPSRYRSEPQRQHL 334 P+A+L+WRL IDG+PSR+RSEPQR+H Sbjct 304 PVAKLLWRLLSIDGRPSRFRSEPQRRHF 331 >gi|317509390|ref|ZP_07967009.1| hypothetical protein HMPREF9336_03381 [Segniliparus rugosus ATCC BAA-974] gi|316252313|gb|EFV11764.1| hypothetical protein HMPREF9336_03381 [Segniliparus rugosus ATCC BAA-974] Length=347 Score = 425 bits (1092), Expect = 6e-117, Method: Compositional matrix adjust. Identities = 198/331 (60%), Positives = 253/331 (77%), Gaps = 1/331 (0%) Query 10 WRRNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLG 69 W +D D Y E LATLSEGSVRR+FNP+TDIDW++PEF V ND RW+LP TDP+ Sbjct 7 WLAELDPIADKAYCERLATLSEGSVRRSFNPFTDIDWDAPEFEVVPNDRRWLLPQTDPIA 66 Query 70 RHPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHES 129 + WYQ+ E+QIE+GMWRQANVAKVGL FE LIRG++ Y+ +PNGSPEYRYC+HE Sbjct 67 KTDWYQSLPEEKQIEVGMWRQANVAKVGLQFEVALIRGMVLYSVGLPNGSPEYRYCVHEI 126 Query 130 VEECNHTMMFQEMVNRVGADVPGLPRRLRWVSPL-VPLVAGPLPVAFFIGVLAGEEPIDH 188 EECNH MFQEMVNR+GA+V G+ + ++ + L+A P AFF VLAGEEPID Sbjct 127 AEECNHNQMFQEMVNRIGAEVSGMSKLRQFTTGFGAELLAQFFPSAFFTAVLAGEEPIDF 186 Query 189 TQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLT 248 QK++LREGKS+HPIME VM+IHVAEEARHISFAHE+L+ R PR+ R+ RF +SL +PL Sbjct 187 VQKSILREGKSIHPIMESVMAIHVAEEARHISFAHEFLKLRTPRVGRLSRFALSLAYPLI 246 Query 249 MRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPI 308 MR + IVVPP++FW++FDIP+ VKKE+F+ + E+R + + AD+R LAH+ G+MNP+ Sbjct 247 MRFVEELIVVPPRSFWKKFDIPKSVKKEIFWQNEEARDFRRRLLADSRALAHEMGIMNPV 306 Query 309 ARLVWRLCKIDGKPSRYRSEPQRQHLAAAPA 339 A+L+WRL IDG+PSR+RSEPQR+H A Sbjct 307 AKLLWRLLSIDGRPSRFRSEPQRRHFEQQSA 337 >gi|343925229|ref|ZP_08764756.1| hypothetical protein GOALK_038_00340 [Gordonia alkanivorans NBRC 16433] gi|343764826|dbj|GAA11682.1| hypothetical protein GOALK_038_00340 [Gordonia alkanivorans NBRC 16433] Length=347 Score = 419 bits (1076), Expect = 4e-115, Method: Compositional matrix adjust. Identities = 192/315 (61%), Positives = 242/315 (77%), Gaps = 1/315 (0%) Query 16 VADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILP-ATDPLGRHPWY 74 + +Y ++L LS SV RNF+PY DIDW++P A+T+NDPRWIL DP+GRHPWY Sbjct 28 TGSEQDYGQVLDDLSSASVHRNFDPYVDIDWDAPHMAITENDPRWILSYEVDPIGRHPWY 87 Query 75 QAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECN 134 Q +QIEIGMWRQANVAKVGL FES+LIRGLM Y+F +PNG+ E+RY HES EECN Sbjct 88 QQLPESKQIEIGMWRQANVAKVGLQFESVLIRGLMQYSFKLPNGAREFRYTTHESKEECN 147 Query 135 HTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVL 194 HT+MFQE VNRVG DVPG R +SP VPLV+ P+ FF GVL GEEPIDH QK+ L Sbjct 148 HTLMFQEFVNRVGMDVPGAKVGYRLISPFVPLVSTVFPIVFFFGVLGGEEPIDHIQKDFL 207 Query 195 REGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCN 254 R LHP M VM +HVAEEARHISFAH ++R+++P+ R QRF +SL PLTMR+LC+ Sbjct 208 RTRARLHPTMAAVMQLHVAEEARHISFAHHFIREQVPQRNRFQRFLLSLMLPLTMRTLCS 267 Query 255 AIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWR 314 AIVVPP++F +EFD+PREV K++F+ S ES+++L ++F D RMLA +GLMNP++RL+WR Sbjct 268 AIVVPPRSFAKEFDVPREVMKDIFWRSEESKRFLRNVFGDVRMLADQSGLMNPVSRLLWR 327 Query 315 LCKIDGKPSRYRSEP 329 + I G+PSR+RSEP Sbjct 328 VLGISGRPSRFRSEP 342 >gi|343926575|ref|ZP_08766078.1| hypothetical protein GOALK_062_00040 [Gordonia alkanivorans NBRC 16433] gi|343763512|dbj|GAA13004.1| hypothetical protein GOALK_062_00040 [Gordonia alkanivorans NBRC 16433] Length=346 Score = 413 bits (1062), Expect = 2e-113, Method: Compositional matrix adjust. Identities = 191/315 (61%), Positives = 237/315 (76%), Gaps = 1/315 (0%) Query 16 VADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWIL-PATDPLGRHPWY 74 D +YV++L LS SV RNF+PY DIDW++P+ A+ DNDPRWIL P DP+GRHPWY Sbjct 27 TGTDHDYVQVLDDLSAASVHRNFDPYIDIDWDAPDMAIIDNDPRWILSPEVDPIGRHPWY 86 Query 75 QAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECN 134 Q +E+QIEIGMWRQANVAKVGL FESILIRGLM Y+F +PNG+ E+RY HE EECN Sbjct 87 QQLPQEKQIEIGMWRQANVAKVGLQFESILIRGLMQYSFKLPNGAREFRYTTHECKEECN 146 Query 135 HTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVL 194 HT+MFQE VNR G DVPG R +SP VPL++ P FF+GVL GEEPIDH QK+ L Sbjct 147 HTLMFQEFVNRTGMDVPGAKVGFRLISPFVPLLSTVFPTLFFLGVLGGEEPIDHIQKDFL 206 Query 195 REGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCN 254 R +LHP M VM +HVAEEARHISFAH +R+++P+ R QRF +SL P+ MR LCN Sbjct 207 RTRANLHPTMAAVMQLHVAEEARHISFAHHLIREQVPQRGRFQRFMMSLMLPIIMRVLCN 266 Query 255 AIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWR 314 AI+VPP++F + FDIP EV K+ F+ SPES+++L + F D RML +GLMNP+AR++WR Sbjct 267 AIIVPPRSFAKRFDIPGEVMKDSFWRSPESKRFLRNTFGDVRMLGEQSGLMNPVARMLWR 326 Query 315 LCKIDGKPSRYRSEP 329 I G+PSR+RSEP Sbjct 327 ALGISGRPSRFRSEP 341 >gi|311743422|ref|ZP_07717228.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312552|gb|EFQ82463.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=341 Score = 409 bits (1052), Expect = 2e-112, Method: Compositional matrix adjust. Identities = 190/318 (60%), Positives = 246/318 (78%), Gaps = 2/318 (0%) Query 21 EYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGRHPWYQAQSR 79 +Y L TLSEGSV R+F+ + D+DW+S F + +DPRW+LP TDPLG HPWY A + Sbjct 25 QYAAALKTLSEGSVERHFDAFLDVDWDSEAFQIRHDDPRWVLPPNTDPLGSHPWYLALPQ 84 Query 80 ERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMF 139 ERQIEIGMWRQAN+ +VGL FE++LIRG+M Y F +PNGSPEYRY HE+ EEC+HT MF Sbjct 85 ERQIEIGMWRQANILRVGLQFENVLIRGIMQYVFTLPNGSPEYRYLTHEATEECHHTQMF 144 Query 140 QEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKS 199 QE VNR+G DVPG+PR ++ + P++P+ A +PVAFFI VL+GEEPIDHTQK +LR+G Sbjct 145 QETVNRIGIDVPGMPRWVKTLLPVIPMTASVVPVAFFIMVLSGEEPIDHTQKAILRDGHQ 204 Query 200 LHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVP 259 + P+M+R+M IHVAEEARHISFAHEYL+ PR+ R+ RF S+ FP+ MR+ C+ I+VP Sbjct 205 MPPVMQRIMEIHVAEEARHISFAHEYLKYHAPRMGRLNRFAASIAFPIIMRAGCDLIMVP 264 Query 260 PKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKID 319 P F +EFDIP+ V KEL++ +PESR+ L ++FAD RMLA + GLMN ++R+VWRL KID Sbjct 265 PADFRKEFDIPKSVIKELYWKAPESRERLAELFADVRMLAEEAGLMNRVSRVVWRLLKID 324 Query 320 GKPSRYRSEPQRQHLAAA 337 G+ SR+R P HL AA Sbjct 325 GRSSRFRGHPA-PHLRAA 341 >gi|289446450|ref|ZP_06436194.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] gi|289419408|gb|EFD16609.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A] Length=339 Score = 409 bits (1052), Expect = 3e-112, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%), Gaps = 0/199 (0%) Query 142 MVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLH 201 MVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLH Sbjct 141 MVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLH 200 Query 202 PIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVPPK 261 PIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVPPK Sbjct 201 PIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVPPK 260 Query 262 AFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDGK 321 AFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDGK Sbjct 261 AFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDGK 320 Query 322 PSRYRSEPQRQHLAAAPAA 340 PSRYRSEPQRQHLAAAPAA Sbjct 321 PSRYRSEPQRQHLAAAPAA 339 >gi|319949120|ref|ZP_08023213.1| hypothetical protein ES5_06922 [Dietzia cinnamea P4] gi|319437230|gb|EFV92257.1| hypothetical protein ES5_06922 [Dietzia cinnamea P4] Length=329 Score = 398 bits (1022), Expect = 7e-109, Method: Compositional matrix adjust. Identities = 186/310 (60%), Positives = 237/310 (77%), Gaps = 1/310 (0%) Query 21 EYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGRHPWYQAQSR 79 EY + L LS SV R+F+P+ DI W+ P+F+V D RW+LPA DPLG HPWY++Q Sbjct 14 EYEDTLRRLSHASVHRSFDPFKDIAWDHPDFSVDPTDERWVLPAGIDPLGGHPWYKSQPL 73 Query 80 ERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMF 139 E+QIEIG+WRQAN+ KVGL FE+ILIRG+M Y F NGS E+RY HE+ EEC+HT MF Sbjct 74 EKQIEIGLWRQANIMKVGLQFENILIRGIMQYVFKAENGSAEFRYLTHEATEECHHTQMF 133 Query 140 QEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKS 199 Q+ VN++GADVPG+PR +R +SP++PL AG PVAFFIGVLAGEEPIDHTQK VLR S Sbjct 134 QQGVNQIGADVPGMPRWMRRLSPILPLAAGRFPVAFFIGVLAGEEPIDHTQKQVLRNSDS 193 Query 200 LHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVP 259 L P++ R+M IHVAEEARHISFAH Y+ + P+L+R + +SL FP+ MR LC+AI+ P Sbjct 194 LPPVLSRIMEIHVAEEARHISFAHTYVARNAPKLSRRDAYLVSLLFPVIMRVLCDAILKP 253 Query 260 PKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKID 319 + F E FDIP EV +EL++ SPES+++L D+F D RMLA ++GLMN +R +WR KID Sbjct 254 TREFRETFDIPDEVVRELYWDSPESQRFLSDLFGDVRMLAEESGLMNRTSRRLWRALKID 313 Query 320 GKPSRYRSEP 329 G+PSRYR EP Sbjct 314 GRPSRYRGEP 323 >gi|333918191|ref|YP_004491772.1| hypothetical protein AS9A_0515 [Amycolicicoccus subflavus DQS3-9A1] gi|333480412|gb|AEF38972.1| hypothetical protein AS9A_0515 [Amycolicicoccus subflavus DQS3-9A1] Length=363 Score = 394 bits (1012), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 180/321 (57%), Positives = 236/321 (74%), Gaps = 0/321 (0%) Query 17 ADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQA 76 A + EY + L TLSEGSVR++F+PY DIDW+SPEF V D RWILP DPLGRHPWY A Sbjct 37 AINDEYTDALQTLSEGSVRKHFDPYEDIDWDSPEFRVDPTDRRWILPKADPLGRHPWYLA 96 Query 77 QSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHT 136 Q ++QIEIGMWRQAN+ +VG+HFE++LIRG+M Y + + NG+PE+RY HE+ EECNHT Sbjct 97 QPEDKQIEIGMWRQANIMRVGMHFENVLIRGIMQYVWNLDNGNPEFRYLTHEAAEECNHT 156 Query 137 MMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLRE 196 MFQE VNR+GADVPG+ LR + P + P FF VL GEEPIDH QK++LR Sbjct 157 QMFQEGVNRIGADVPGMTGLLRKLVPFAEIAVKFYPEWFFTFVLGGEEPIDHLQKSILRA 216 Query 197 GKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAI 256 G +HP++ERVM IHVAEEARHISFAH+YL + +P+ ++R +S+ FP+TMR +C+ I Sbjct 217 GGEIHPMLERVMQIHVAEEARHISFAHKYLERNVPQANLVKRHLLSVLFPVTMRWMCDII 276 Query 257 VVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLC 316 ++PPK F E+FDIP+ V KEL++ + ES++ L ++F D R LA +GLM P+ +L W+LC Sbjct 277 IIPPKEFGEKFDIPKSVLKELYWDTDESKETLRNIFGDVRALARHSGLMTPVGKLAWKLC 336 Query 317 KIDGKPSRYRSEPQRQHLAAA 337 I G+ SR+RSEP A Sbjct 337 GIGGRESRFRSEPTADQTIVA 357 >gi|296140555|ref|YP_003647798.1| hypothetical protein Tpau_2861 [Tsukamurella paurometabola DSM 20162] gi|296028689|gb|ADG79459.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=335 Score = 394 bits (1011), Expect = 2e-107, Method: Compositional matrix adjust. Identities = 185/311 (60%), Positives = 228/311 (74%), Gaps = 1/311 (0%) Query 20 AEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPAT-DPLGRHPWYQAQS 78 AEY + L LSE SVRRNF+PY DIDW+ PE A+ +DPRW+ + DP+GRHPWYQAQ Sbjct 20 AEYEQTLTDLSEASVRRNFDPYLDIDWDDPELAIVPDDPRWVCDSRFDPIGRHPWYQAQP 79 Query 79 RERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMM 138 +QIEIGMWRQANVAKVGL FES+LIRG+M YT +PN SPE+RY HE+ EEC HT+M Sbjct 80 LAKQIEIGMWRQANVAKVGLQFESMLIRGIMQYTAALPNNSPEFRYATHEAKEECQHTLM 139 Query 139 FQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGK 198 FQE VNRVG DVPG LR +SP+VPL A P+ F++ VL GEEPIDH QK LR G Sbjct 140 FQEFVNRVGMDVPGGSWFLRRISPIVPLAATIAPLYFYMMVLGGEEPIDHLQKQFLRSGS 199 Query 199 SLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVV 258 HP M +M IHVAEEARHI FAH+ L ++P R +SL P+TMR + I++ Sbjct 200 EQHPAMSSIMQIHVAEEARHIGFAHQLLEHKIPTRGAFPRLVLSLMLPITMRVMVTMIMM 259 Query 259 PPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKI 318 PPK FW+ FDIPR VKK++F+ SPES++ D+F D RM+A GLMNP+A+L+WR+C I Sbjct 260 PPKQFWDTFDIPRSVKKDIFWRSPESQQMKRDVFGDVRMMADKAGLMNPLAKLMWRICGI 319 Query 319 DGKPSRYRSEP 329 DG+ SR+RSEP Sbjct 320 DGRISRFRSEP 330 >gi|296139200|ref|YP_003646443.1| hypothetical protein Tpau_1477 [Tsukamurella paurometabola DSM 20162] gi|296027334|gb|ADG78104.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=335 Score = 391 bits (1005), Expect = 7e-107, Method: Compositional matrix adjust. Identities = 189/312 (61%), Positives = 228/312 (74%), Gaps = 1/312 (0%) Query 19 DAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPAT-DPLGRHPWYQAQ 77 AEY + L LSE SV+RNF+PY DIDW+SPE AVT +DPRWIL + DP+GR WYQAQ Sbjct 19 QAEYEQTLQDLSEASVQRNFDPYVDIDWDSPELAVTPDDPRWILDSRFDPIGRTEWYQAQ 78 Query 78 SRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTM 137 R +QIE+GMWRQANVAKVGL FES+LIRG+M YT PN SPE+RY HE+ EEC HT+ Sbjct 79 PRSKQIEMGMWRQANVAKVGLQFESVLIRGIMQYTAVQPNNSPEFRYATHEAKEECQHTL 138 Query 138 MFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREG 197 MFQE VNR+G DVPG P R +SPL+PL A P+ F++GVL GEEPIDH QK LR G Sbjct 139 MFQEFVNRIGMDVPGGPLWFRRLSPLIPLAATTFPMIFYMGVLGGEEPIDHVQKQFLRSG 198 Query 198 KSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIV 257 HP M VM +HVAEEARHISFAH+ L R+P RF +SL PL MRSL AI Sbjct 199 IEQHPTMTAVMQLHVAEEARHISFAHQLLEHRIPTRGAFPRFLLSLALPLVMRSLLTAIA 258 Query 258 VPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCK 317 VPP+ F + FDIPREV K++++ SPES+ ++F D R+LA T LMNP++RL+WR Sbjct 259 VPPRQFRKRFDIPREVWKQMYWRSPESQAMKREVFGDVRLLAEHTKLMNPVSRLLWRALG 318 Query 318 IDGKPSRYRSEP 329 IDG+ SR+RSEP Sbjct 319 IDGRTSRFRSEP 330 >gi|296140638|ref|YP_003647881.1| hypothetical protein Tpau_2944 [Tsukamurella paurometabola DSM 20162] gi|296028772|gb|ADG79542.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=340 Score = 390 bits (1002), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 187/319 (59%), Positives = 228/319 (72%), Gaps = 1/319 (0%) Query 12 RNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWIL-PATDPLGR 70 R EY + L LSE SVRRNF+PY DIDW+SPE A+T +DPRW+ P DP+GR Sbjct 17 RGRSFPGQTEYEQTLNDLSEASVRRNFDPYVDIDWDSPELAITPDDPRWVCNPRFDPIGR 76 Query 71 HPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESV 130 HPWYQAQ E+QIEIGMWRQANVAKVGL FESILIRG+M YT PN SPE+RY HE+ Sbjct 77 HPWYQAQPLEKQIEIGMWRQANVAKVGLQFESILIRGIMQYTAVQPNNSPEFRYATHEAK 136 Query 131 EECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQ 190 EEC HT+MFQE VNR G DVPG R +SP++PL A P F++GVL GEEPIDH Q Sbjct 137 EECQHTLMFQEFVNRTGMDVPGGAWWFRRLSPIIPLAATTFPNIFYMGVLGGEEPIDHLQ 196 Query 191 KNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMR 250 K LR + HP M VM IHVAEEARHISFAH+ L ++P + RF +SL PL MR Sbjct 197 KQFLRSADTQHPAMTAVMQIHVAEEARHISFAHQLLEHKIPTRGPIPRFLLSLALPLVMR 256 Query 251 SLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIAR 310 L AI+VPP+ FW+ FDIPR VKK++F+ SPES+ ++F D R+LA T L+NP++R Sbjct 257 ILLGAIMVPPRQFWDTFDIPRSVKKDIFWRSPESKAMRQEVFGDVRLLAERTNLLNPVSR 316 Query 311 LVWRLCKIDGKPSRYRSEP 329 ++WR+ I G+ SR+RSEP Sbjct 317 ILWRVLGIHGRVSRFRSEP 335 >gi|333918189|ref|YP_004491770.1| hypothetical protein AS9A_0513 [Amycolicicoccus subflavus DQS3-9A1] gi|333480410|gb|AEF38970.1| hypothetical protein AS9A_0513 [Amycolicicoccus subflavus DQS3-9A1] Length=358 Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 182/319 (58%), Positives = 229/319 (72%), Gaps = 0/319 (0%) Query 19 DAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQAQS 78 +A Y ++L TLS+GSV R F+PY DIDWESP+F + D RWILP DPLGRHPWY AQS Sbjct 34 NASYGQVLRTLSDGSVHRRFDPYLDIDWESPDFQIDPADKRWILPPADPLGRHPWYLAQS 93 Query 79 RERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMM 138 E+QI IG+WRQAN+ +VGLHFE +LIRGLM Y F + NG PE+RY HE+ EECNHT+M Sbjct 94 EEKQIAIGIWRQANMCRVGLHFEQLLIRGLMQYMFSLKNGDPEFRYITHEAAEECNHTLM 153 Query 139 FQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGK 198 FQE+VNR G DVPG+ R ++ + P FF ++ GEEPIDH QK VLR G Sbjct 154 FQELVNRAGVDVPGMGPVDRKLTLAIWPAVRFFPTWFFTMIIGGEEPIDHLQKTVLRSGG 213 Query 199 SLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVV 258 +HP++ER+M IH+AEE+RHISFAHEYLR+ + + + RF +SL PLT R + + I V Sbjct 214 QVHPLLERIMQIHIAEESRHISFAHEYLRRHVTGMGTVGRFALSLLTPLTFRIMGDMIAV 273 Query 259 PPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKI 318 PP F + F IPR V +EL++ SPESR+ L ++FAD R LA DTGLMNPIAR +W+L I Sbjct 274 PPAEFRKTFGIPRSVIRELYWKSPESRETLQNIFADVRALAWDTGLMNPIARRLWKLLAI 333 Query 319 DGKPSRYRSEPQRQHLAAA 337 DG SRYRSEP + + A Sbjct 334 DGPISRYRSEPTAEQVRIA 352 >gi|226307202|ref|YP_002767162.1| hypothetical protein RER_37150 [Rhodococcus erythropolis PR4] gi|226186319|dbj|BAH34423.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=329 Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 183/321 (58%), Positives = 231/321 (72%), Gaps = 1/321 (0%) Query 12 RNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGR 70 R+ + + Y ++L TLSEGSV R+F+PY DIDW+SPEFA+ +DPRW+L + +DPLG Sbjct 3 RSASIEVEKPYRQVLQTLSEGSVARSFDPYLDIDWDSPEFAIDPHDPRWVLSSVSDPLGA 62 Query 71 HPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESV 130 WYQ QS ER+I +GMWRQANV KVG FESILIRG++ Y +PN SPE+RYCLHE Sbjct 63 TQWYQDQSLERRIAMGMWRQANVTKVGSAFESILIRGMLQYIMALPNQSPEFRYCLHEMT 122 Query 131 EECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQ 190 EECNH MFQE+VNR+ DVPG+ R +SP++ ++ PV FFIG+LAGEEPIDH Q Sbjct 123 EECNHIQMFQELVNRMDIDVPGMRPMFRRLSPIIGVLGAKFPVIFFIGILAGEEPIDHFQ 182 Query 191 KNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMR 250 K+++REGK P M R M IH+AEEARHISFAHE+LR +PRL+R R S+ FP TMR Sbjct 183 KDLIREGKDTPPAMLRTMEIHIAEEARHISFAHEFLRNHVPRLSRTSRAITSVAFPGTMR 242 Query 251 SLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIAR 310 L I+ PPK F EEF IP EV K F+GSP SR+ L + F + R LA + GLMNP+++ Sbjct 243 WLAGEIMSPPKEFAEEFGIPDEVMKSAFWGSPHSRRILGNYFGEMRALADELGLMNPVSK 302 Query 311 LVWRLCKIDGKPSRYRSEPQR 331 WR +IDG +RYR EP+R Sbjct 303 RAWRKLRIDGDYARYRGEPKR 323 >gi|229493160|ref|ZP_04386952.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] gi|229319891|gb|EEN85720.1| conserved hypothetical protein [Rhodococcus erythropolis SK121] Length=329 Score = 379 bits (972), Expect = 5e-103, Method: Compositional matrix adjust. Identities = 182/321 (57%), Positives = 230/321 (72%), Gaps = 1/321 (0%) Query 12 RNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGR 70 R+ + + Y ++L TLSEGSV R+F+PY DIDW+SPEFA+ +DPRW+L + +DPLG Sbjct 3 RSASIEVEKPYHQVLQTLSEGSVARSFDPYLDIDWDSPEFAIDPHDPRWVLSSVSDPLGA 62 Query 71 HPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESV 130 WYQ QS ER+I +GMWRQANV KVG FESILIRG++ Y +PN SPE+RYCLHE Sbjct 63 TQWYQDQSLERRIAMGMWRQANVTKVGSAFESILIRGMLQYIMALPNQSPEFRYCLHEMT 122 Query 131 EECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQ 190 EECNH MFQE+VNR+ DVPG+ R +SP++ ++ PV FFIG+LAGEEPIDH Q Sbjct 123 EECNHIQMFQELVNRMDIDVPGMRPMFRRLSPIIGVLGAKFPVIFFIGILAGEEPIDHFQ 182 Query 191 KNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMR 250 K+++REGK P M R M IH+AEEARHISFAHE+LR +PRL+R R S+ FP MR Sbjct 183 KDLIREGKDTPPAMLRTMEIHIAEEARHISFAHEFLRNHVPRLSRTSRAITSVAFPGAMR 242 Query 251 SLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIAR 310 L I+ PPK F EEF IP EV K F+GSP SR+ L + F + R LA + GLMNP+++ Sbjct 243 WLAGEIMSPPKEFAEEFGIPDEVMKSAFWGSPHSRRILGNYFGEMRALADELGLMNPVSK 302 Query 311 LVWRLCKIDGKPSRYRSEPQR 331 WR +IDG +RYR EP+R Sbjct 303 RAWRKLRIDGDYARYRGEPKR 323 >gi|54023375|ref|YP_117617.1| hypothetical protein nfa14080 [Nocardia farcinica IFM 10152] gi|54014883|dbj|BAD56253.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=337 Score = 378 bits (970), Expect = 8e-103, Method: Compositional matrix adjust. Identities = 184/318 (58%), Positives = 232/318 (73%), Gaps = 1/318 (0%) Query 15 DVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILP-ATDPLGRHPW 73 D+A EY L LSEGSV R+F+P+ DIDW++P++A T + RWILP + DPLGRHPW Sbjct 15 DLAKAQEYAAKLLLLSEGSVNRHFDPFEDIDWDNPDYAATAGEERWILPQSADPLGRHPW 74 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 Y A +++QIEIG +RQANVAKVGL FESILI G++ + F +PNGSPE+RYC HE +EE Sbjct 75 YLALPKDKQIEIGKYRQANVAKVGLQFESILISGMVIHNFGLPNGSPEFRYCSHEMIEEH 134 Query 134 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 193 NHT+MFQEMVNR+G DVPG+ + L VA P FF+ VLAGEEPIDH QK + Sbjct 135 NHTLMFQEMVNRIGIDVPGMGPLVSKFKYLAAPVAALAPNLFFMAVLAGEEPIDHIQKQI 194 Query 194 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 253 LR G+ +HPIM VM+IHVAEEARHISFAHE+L+ +P + +F +SL PL M L Sbjct 195 LRSGEEVHPIMLGVMAIHVAEEARHISFAHEFLKTHVPEVNAANKFVLSLAMPLVMWILG 254 Query 254 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 313 +I PPK+F++EF IP +V+KELF+GS E+++ D F D R LA + GLMNPIA+ VW Sbjct 255 RSIATPPKSFFKEFGIPEKVRKELFYGSKEAKQVFSDYFVDVRALAKELGLMNPIAKRVW 314 Query 314 RLCKIDGKPSRYRSEPQR 331 +L KIDG SRYRSEP R Sbjct 315 KLLKIDGPSSRYRSEPLR 332 >gi|311742319|ref|ZP_07716128.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311313947|gb|EFQ83855.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length=330 Score = 372 bits (955), Expect = 5e-101, Method: Compositional matrix adjust. Identities = 180/317 (57%), Positives = 230/317 (73%), Gaps = 1/317 (0%) Query 22 YVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPA-TDPLGRHPWYQAQSRE 80 Y E L LS+ SV R+F+ + D+ W+ P+F+V +D RWILPA DPLG HPWYQA Sbjct 14 YEESLKRLSQASVDRHFDAFVDVQWDHPDFSVDPDDARWILPAGADPLGGHPWYQALPVA 73 Query 81 RQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQ 140 RQIEIG WRQAN+ KVGL FE+ILIRG+M Y F PNGS EYRY HE+ EEC+HT MFQ Sbjct 74 RQIEIGQWRQANIMKVGLQFENILIRGIMQYVFTRPNGSAEYRYLTHEATEECHHTQMFQ 133 Query 141 EMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSL 200 E VNR+G DVPG+P +R ++ +P P+AFFIGVLAGEEPIDHTQK V+R G Sbjct 134 ECVNRIGVDVPGMPFWMRKIATFLPWAGSAFPLAFFIGVLAGEEPIDHTQKQVMRAGAEG 193 Query 201 HPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVPP 260 P++ RVM IH+AEEARHISFAH Y+++ +L R++R ++ +P+ MR L +AI+VP Sbjct 194 PPVLRRVMEIHIAEEARHISFAHLYIQRNAHKLGRIERQIVAALYPVIMRVLGDAILVPG 253 Query 261 KAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDG 320 K F EFDIP+ V K+L++ SPESR+ L ++F+D RMLA ++GLM +R +W KIDG Sbjct 254 KEFRREFDIPKHVIKDLYWRSPESRERLSEIFSDVRMLAEESGLMTRFSRRLWSWLKIDG 313 Query 321 KPSRYRSEPQRQHLAAA 337 +PSRYRSEP Q AAA Sbjct 314 RPSRYRSEPPVQLSAAA 330 >gi|296138924|ref|YP_003646167.1| hypothetical protein Tpau_1197 [Tsukamurella paurometabola DSM 20162] gi|296027058|gb|ADG77828.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=332 Score = 363 bits (932), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/326 (56%), Positives = 219/326 (68%), Gaps = 1/326 (0%) Query 12 RNMDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPAT-DPLGR 70 R A D YV+ LA LS+GSV R F+PY DIDWESPE + NDPRW+LP T D LG Sbjct 7 RTGATAFDQGYVDTLADLSDGSVHRRFDPYLDIDWESPELRLDPNDPRWVLPPTLDSLGA 66 Query 71 HPWYQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESV 130 WY+ ERQIEIG WR AN KVG FESILIRG+M Y +PN SPE+RYCLHE Sbjct 67 TRWYRDLPLERQIEIGKWRMANTIKVGAAFESILIRGMMQYIMKLPNKSPEFRYCLHEMT 126 Query 131 EECNHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQ 190 EECNH MFQE+VNR+ DVPG+ +R R SP++ ++ G V F+G+L GEEPIDH Q Sbjct 127 EECNHIQMFQELVNRIDVDVPGMRKRFRRASPMIGVLGGYAHVILFMGILGGEEPIDHYQ 186 Query 191 KNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMR 250 K ++R G L P++ R M IHVAEEARHI+FAHE+L L +T+ Q+ +L FPL MR Sbjct 187 KAIMRHGGELPPLVLRTMQIHVAEEARHITFAHEFLHAHLQGMTKRQKRICALAFPLAMR 246 Query 251 SLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIAR 310 L I PPK F+E FD+PREV++E F+ P +R L D FA+ R LA D GLM P R Sbjct 247 WLVGEIFTPPKEFFELFDVPREVRREAFWRGPIARALLNDYFAEMRALADDLGLMTPTGR 306 Query 311 LVWRLCKIDGKPSRYRSEPQRQHLAA 336 +W+L KIDG +RYR EP R AA Sbjct 307 RIWKLLKIDGHHARYRGEPTRPAQAA 332 >gi|54024585|ref|YP_118827.1| hypothetical protein nfa26160 [Nocardia farcinica IFM 10152] gi|54016093|dbj|BAD57463.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=329 Score = 362 bits (929), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 173/315 (55%), Positives = 220/315 (70%), Gaps = 1/315 (0%) Query 19 DAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWIL-PATDPLGRHPWYQAQ 77 D EY + LATLS+GSV R F+PY DIDW+SPE + NDPRWIL P DPLG WY+ Sbjct 13 DQEYRDALATLSDGSVHRKFDPYLDIDWDSPELGIDKNDPRWILSPDYDPLGATSWYRNL 72 Query 78 SRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTM 137 ERQIEIG WR AN KVG FES+LIRG+M Y +PN SPE+RYCLHE EECNH Sbjct 73 PVERQIEIGRWRTANAIKVGAAFESVLIRGMMQYIMKLPNQSPEFRYCLHEMTEECNHIQ 132 Query 138 MFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREG 197 MFQE+VNR+G DVPG+ R +SP + + G P FIG+L GEEPIDH QK +LR+G Sbjct 133 MFQELVNRIGDDVPGMRPIFRRLSPFIGVAGGFAPAILFIGILGGEEPIDHYQKALLRDG 192 Query 198 KSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIV 257 ++ P + R M IH+AEEARHISFA+E+L+ L +T R ++ FP+ MR L I+ Sbjct 193 GNIPPAVRRCMQIHIAEEARHISFANEFLKAHLEHMTPAGRAVCAVAFPVVMRWLAGEIM 252 Query 258 VPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCK 317 VPP++F E+FD+PREV KE F+ +P S++ L F D R LA + GLMNP+ + +W L Sbjct 253 VPPRSFAEKFDVPREVFKEAFWRAPHSKRILAGYFGDVRKLADELGLMNPVTKRLWALLN 312 Query 318 IDGKPSRYRSEPQRQ 332 +DG+ SRYRSEP+R+ Sbjct 313 VDGEASRYRSEPERR 327 >gi|169629931|ref|YP_001703580.1| hypothetical protein MAB_2847c [Mycobacterium abscessus ATCC 19977] gi|169241898|emb|CAM62926.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=337 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 182/325 (56%), Positives = 225/325 (70%), Gaps = 2/325 (0%) Query 17 ADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWIL-PATDPLGRHPWYQ 75 A DAEY++ L TLSEGSVR +F+P+ DIDW+SP++ + NDPRW+L P D LG WY+ Sbjct 11 AFDAEYLQTLQTLSEGSVRLHFDPFEDIDWDSPDYQIDRNDPRWVLDPELDTLGATEWYR 70 Query 76 AQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNH 135 Q ERQIEIG WRQAN KVGL FESILIRG+M Y +PNGSPE+RYCLHE EECNH Sbjct 71 NQPLERQIEIGRWRQANAVKVGLAFESILIRGMMQYLMKLPNGSPEFRYCLHEMTEECNH 130 Query 136 TMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLR 195 MFQE+VNR+G DVPG+ + R SP + ++ G V FIG+L GEEPIDH QK+++R Sbjct 131 IQMFQELVNRIGDDVPGMRKWFRRASPFIGVLGGWAHVVLFIGILGGEEPIDHYQKSLIR 190 Query 196 EGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNA 255 P + RVM IHVAEEARHISFA E+LR +P +++ ++ ++ FPLTMR L Sbjct 191 NDIDQPPAVRRVMQIHVAEEARHISFAGEFLRVHVPLMSKRKKAICTVLFPLTMRWLAGE 250 Query 256 IVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRL 315 I+ PP++F EFDIPREV KE F+ S +R L F D R L D GL R +W+L Sbjct 251 IMTPPRSFATEFDIPREVFKEAFWRSEHARNTLSGYFGDMRKLTEDIGLRPWWVRPLWKL 310 Query 316 CKIDGKPSRYRSEPQRQHLAAAPAA 340 IDG+PSRYRSEP R H A AP A Sbjct 311 LHIDGRPSRYRSEPDRSH-AGAPLA 334 >gi|333919408|ref|YP_004492989.1| hypothetical protein AS9A_1740 [Amycolicicoccus subflavus DQS3-9A1] gi|333481629|gb|AEF40189.1| hypothetical protein AS9A_1740 [Amycolicicoccus subflavus DQS3-9A1] Length=333 Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust. Identities = 168/318 (53%), Positives = 217/318 (69%), Gaps = 0/318 (0%) Query 14 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 73 M + D+ Y E L TLSEGSV +F+PY DIDW++P++AV D RWILP DPLG H W Sbjct 1 MTLTDEQVYAERLQTLSEGSVHISFDPYKDIDWDNPDWAVDPTDTRWILPKVDPLGSHAW 60 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 Y +Q E+QI IGMWRQANVA+VGLHFE +LIR M Y + N P +RY HE+ EEC Sbjct 61 YLSQPVEKQIAIGMWRQANVARVGLHFEQLLIRAFMQYMVRLENNDPAFRYITHEAAEEC 120 Query 134 NHTMMFQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNV 193 NHT+MFQEMVNR+GADVPG+ R ++ + P FF+ +L GEEPIDH QK + Sbjct 121 NHTLMFQEMVNRIGADVPGMDPISRKLTLAIWPAVSFFPELFFVMILGGEEPIDHLQKEI 180 Query 194 LREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLC 253 LR G ++HP++ R+M IHVAEEARHISFAHEYL+ +P+ ++ +S+ P+ MR + Sbjct 181 LRGGDTIHPMLTRIMQIHVAEEARHISFAHEYLKLNVPKANFAKKAALSVATPIVMRLMA 240 Query 254 NAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVW 313 + PP F EFDIP V +EL++ S + + L +FAD R L+ + GLMNP+ RL W Sbjct 241 EMLAAPPAQFRREFDIPDSVIEELYWNSNQGKDTLRRIFADVRALSENIGLMNPVGRLAW 300 Query 314 RLCKIDGKPSRYRSEPQR 331 RLC IDG+ SRYR EP R Sbjct 301 RLCGIDGRASRYRGEPGR 318 >gi|326329870|ref|ZP_08196187.1| hypothetical protein NBCG_01301 [Nocardioidaceae bacterium Broad-1] gi|325952337|gb|EGD44360.1| hypothetical protein NBCG_01301 [Nocardioidaceae bacterium Broad-1] Length=331 Score = 329 bits (843), Expect = 4e-88, Method: Compositional matrix adjust. Identities = 157/309 (51%), Positives = 209/309 (68%), Gaps = 1/309 (0%) Query 22 YVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPWYQAQSRER 81 Y++ L TLSE SV +F+P+ DIDW+S E AV +D RWIL D +G HPWY+A ++R Sbjct 20 YLDTLRTLSEASVEVHFDPFKDIDWDSDELAVLPDDERWILNDADEIGAHPWYKALPKQR 79 Query 82 QIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMMFQE 141 QIEIGM+R A VAKVGL FE +LI G+MN+ W N +PE+RY HE EE +HT MFQE Sbjct 80 QIEIGMYRWAQVAKVGLQFEQLLIGGVMNHLVWSENNNPEFRYATHEVTEETHHTQMFQE 139 Query 142 MVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGKSLH 201 VNRV DV G P + + PL+ P AFF G+LAGEEPIDH QK +R G S H Sbjct 140 FVNRVNPDVAGAPTYFKVLVPLMASAGAWFPEAFFTGILAGEEPIDHLQKGAMRSGGS-H 198 Query 202 PIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVVPPK 261 P R+M IH+AEEARHI FAH+YL + +P L R+++ ++ FP+ MR LC+ I+VP K Sbjct 199 PAANRIMQIHIAEEARHIGFAHQYLEQHVPELGRVKKTLLAYVFPVIMRLLCDVIMVPSK 258 Query 262 AFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPIARLVWRLCKIDGK 321 + IP EV +E+++ S ES K L D+F D R+LA + G+ A+L+W+L IDG+ Sbjct 259 QARYDMGIPDEVAREIWWKSEESEKLLRDLFGDVRLLADNLGIRKGPAKLLWKLTGIDGR 318 Query 322 PSRYRSEPQ 330 SR+R+EP+ Sbjct 319 ASRFRAEPR 327 >gi|326329058|ref|ZP_08195387.1| hypothetical protein NBCG_00494 [Nocardioidaceae bacterium Broad-1] gi|325953140|gb|EGD45151.1| hypothetical protein NBCG_00494 [Nocardioidaceae bacterium Broad-1] Length=330 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 149/321 (47%), Positives = 211/321 (66%), Gaps = 6/321 (1%) Query 14 MDVADDAEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILPATDPLGRHPW 73 M+ Y + L TLS+ SV ++F + DI W+ PEF + ND R+IL D +GRH W Sbjct 6 MNTTTKQSYYDTLRTLSKASVDQHFQAFKDIAWDDPEFHLDPNDERFILTDADEIGRHEW 65 Query 74 YQAQSRERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEEC 133 Y++ S+ERQI++G++R A +AKVG FE +LI G+M++ +G+PE+RY +HE EE Sbjct 66 YKSLSKERQIQVGVYRYAQIAKVGRQFEQVLIAGVMHHLILAKDGNPEFRYAMHEVTEET 125 Query 134 NHTMMFQEMVNRV----GAD-VPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDH 188 +H MFQE VNR G D V G P W++PLV P FF+G+L GEEPIDH Sbjct 126 HHIQMFQESVNRFVENSGVDGVAGAPGWFAWLAPLVTSAGTWFPEIFFVGILGGEEPIDH 185 Query 189 TQKNVLREGKSLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLT 248 QK++LR G S HP+++RVM IH+AEEARHI FAH+YL R+ ++R ++ FP+ Sbjct 186 LQKSILRAGGS-HPLIDRVMQIHIAEEARHIGFAHQYLEHHWARMNPVKRRALTYLFPVV 244 Query 249 MRSLCNAIVVPPKAFWEEFDIPREVKKELFFGSPESRKWLCDMFADARMLAHDTGLMNPI 308 MR LC+ I+VP K E+ IP++V KE+++ S +S K L D+F+D R+LA + G+ Sbjct 245 MRLLCDVIMVPSKQAREDMGIPKDVAKEIWWKSEDSEKLLRDLFSDVRLLADNLGIRKGP 304 Query 309 ARLVWRLCKIDGKPSRYRSEP 329 ARLVWR IDG+ +R+R+EP Sbjct 305 ARLVWRALGIDGRAARFRAEP 325 >gi|326383780|ref|ZP_08205465.1| hypothetical protein SCNU_12622 [Gordonia neofelifaecis NRRL B-59395] gi|326197544|gb|EGD54733.1| hypothetical protein SCNU_12622 [Gordonia neofelifaecis NRRL B-59395] Length=377 Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 143/240 (60%), Positives = 176/240 (74%), Gaps = 1/240 (0%) Query 20 AEYVEMLATLSEGSVRRNFNPYTDIDWESPEFAVTDNDPRWILP-ATDPLGRHPWYQAQS 78 +Y ++L L+ SVRRNF+PY DIDW++P AV NDPRWIL DP+GRHPWYQ+ Sbjct 21 TDYTQVLEDLASASVRRNFDPYIDIDWDAPHMAVVPNDPRWILSYKVDPIGRHPWYQSLP 80 Query 79 RERQIEIGMWRQANVAKVGLHFESILIRGLMNYTFWMPNGSPEYRYCLHESVEECNHTMM 138 RE+QI+IGMWRQANVAKVGL FESILIRGLM Y +PNG +RY HE+ EECNHT+M Sbjct 81 REKQIKIGMWRQANVAKVGLQFESILIRGLMQYADRLPNGDKRFRYTTHEAKEECNHTLM 140 Query 139 FQEMVNRVGADVPGLPRRLRWVSPLVPLVAGPLPVAFFIGVLAGEEPIDHTQKNVLREGK 198 FQE+VNR+G + G+ LR SP++PL + P FF GVLAGEEPIDH QK+ LR + Sbjct 141 FQELVNRIGMETKGMRWWLRRTSPIIPLFSTFWPTIFFFGVLAGEEPIDHIQKDFLRARE 200 Query 199 SLHPIMERVMSIHVAEEARHISFAHEYLRKRLPRLTRMQRFWISLYFPLTMRSLCNAIVV 258 LHP M VM +HVAEEARHISFAH +LR +P R+ +F +S+ P+ MR LC+AIVV Sbjct 201 ELHPAMSAVMELHVAEEARHISFAHNHLRATIPAKGRLTKFALSIAMPIVMRVLCSAIVV 260 Lambda K H 0.324 0.138 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 617544973600 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40