BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0909

Length=59
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608049|ref|NP_215424.1|  hypothetical protein Rv0909 [Mycoba...   119    1e-25
gi|31792097|ref|NP_854590.1|  hypothetical protein Mb0933 [Mycoba...   117    7e-25
gi|289573537|ref|ZP_06453764.1|  conserved hypothetical protein [...  98.6    2e-19
gi|240172908|ref|ZP_04751567.1|  hypothetical protein MkanA1_2658...  84.3    5e-15
gi|118616056|ref|YP_904388.1|  hypothetical protein MUL_0161 [Myc...  82.8    1e-14
gi|254822962|ref|ZP_05227963.1|  hypothetical protein MintA_23744...  81.3    5e-14
gi|41406942|ref|NP_959778.1|  hypothetical protein MAP0844 [Mycob...  77.4    6e-13
gi|342860515|ref|ZP_08717166.1|  hypothetical protein MCOL_16611 ...  75.9    2e-12
gi|296169667|ref|ZP_06851285.1|  conserved hypothetical protein [...  72.8    2e-11
gi|118470721|ref|YP_889869.1|  hypothetical protein MSMEG_5635 [M...  72.0    3e-11
gi|145222349|ref|YP_001133027.1|  hypothetical protein Mflv_1759 ...  67.0    9e-10
gi|120405937|ref|YP_955766.1|  hypothetical protein Mvan_4988 [My...  66.2    1e-09
gi|15828136|ref|NP_302399.1|  hypothetical protein ML2114 [Mycoba...  61.2    5e-08
gi|108801390|ref|YP_641587.1|  hypothetical protein Mmcs_4427 [My...  54.3    6e-06
gi|296392776|ref|YP_003657660.1|  hypothetical protein Srot_0342 ...  53.1    1e-05
gi|38232733|ref|NP_938500.1|  hypothetical protein DIP0103 [Coryn...  50.4    8e-05
gi|54022643|ref|YP_116885.1|  hypothetical protein nfa6760 [Nocar...  50.1    1e-04
gi|302329772|gb|ADL19966.1|  Hypothetical protein Cp1002_0058 [Co...  50.1    1e-04
gi|300857477|ref|YP_003782460.1|  hypothetical protein cpfrc_0006...  49.7    1e-04
gi|169628061|ref|YP_001701710.1|  hypothetical protein MAB_0964 [...  49.3    2e-04
gi|269127490|ref|YP_003300860.1|  hypothetical protein Tcur_3283 ...  48.1    4e-04
gi|54023698|ref|YP_117940.1|  hypothetical protein nfa17300 [Noca...  48.1    5e-04
gi|54022645|ref|YP_116887.1|  hypothetical protein nfa6780 [Nocar...  47.8    6e-04
gi|29829019|ref|NP_823653.1|  hypothetical protein SAV_2477 [Stre...  47.4    7e-04
gi|312138500|ref|YP_004005836.1|  hypothetical protein REQ_10500 ...  46.6    0.001
gi|328885511|emb|CCA58750.1|  hypothetical protein SVEN_5464 [Str...  46.2    0.002
gi|29122983|gb|AAO65787.1|AF440781_6  hypothetical protein [Strep...  46.2    0.002
gi|317507694|ref|ZP_07965401.1|  hypothetical protein HMPREF9336_...  44.7    0.004
gi|85813955|emb|CAF31578.1|  possible kanamycin biosynthetic prot...  44.3    0.006
gi|289425316|ref|ZP_06427093.1|  conserved hypothetical protein [...  44.3    0.006
gi|50842501|ref|YP_055728.1|  hypothetical protein PPA1018 [Propi...  44.3    0.006
gi|282854034|ref|ZP_06263371.1|  conserved hypothetical protein [...  43.9    0.008
gi|333920601|ref|YP_004494182.1|  hypothetical protein AS9A_2935 ...  43.5    0.010
gi|328883797|emb|CCA57036.1|  hypothetical protein; SCN_6 [Strept...  43.5    0.011
gi|119962152|ref|YP_947569.1|  hypothetical protein AAur_1810 [Ar...  43.1    0.013
gi|295836158|ref|ZP_06823091.1|  conserved hypothetical protein [...  43.1    0.013
gi|220912429|ref|YP_002487738.1|  hypothetical protein Achl_1662 ...  42.7    0.016
gi|340775488|gb|EGR97541.1|  hypothetical protein HMPREF1162_0370...  42.4    0.023
gi|325963038|ref|YP_004240944.1|  hypothetical protein Asphe3_164...  42.4    0.026
gi|326333224|ref|ZP_08199471.1|  hypothetical protein NBCG_04661 ...  42.0    0.028
gi|116670229|ref|YP_831162.1|  hypothetical protein Arth_1668 [Ar...  42.0    0.031
gi|284030939|ref|YP_003380870.1|  hypothetical protein Kfla_3007 ...  41.6    0.037
gi|333024039|ref|ZP_08452103.1|  hypothetical protein STTU_1542 [...  41.6    0.042
gi|318059596|ref|ZP_07978319.1|  hypothetical protein SSA3_16736 ...  41.6    0.042
gi|302522289|ref|ZP_07274631.1|  conserved hypothetical protein [...  41.6    0.042
gi|345015483|ref|YP_004817837.1|  hypothetical protein Strvi_8237...  41.2    0.045
gi|284032608|ref|YP_003382539.1|  hypothetical protein Kfla_4723 ...  41.2    0.050
gi|320006828|gb|ADW01678.1|  hypothetical protein Sfla_0210 [Stre...  40.4    0.079
gi|297194740|ref|ZP_06912138.1|  conserved hypothetical protein [...  40.0    0.12 
gi|309812132|ref|ZP_07705890.1|  conserved hypothetical protein [...  40.0    0.12 


>gi|15608049|ref|NP_215424.1| hypothetical protein Rv0909 [Mycobacterium tuberculosis H37Rv]
 gi|15840329|ref|NP_335366.1| hypothetical protein MT0933 [Mycobacterium tuberculosis CDC1551]
 gi|148660687|ref|YP_001282210.1| hypothetical protein MRA_0916 [Mycobacterium tuberculosis H37Ra]
 54 more sequence titles
 Length=59

 Score =  119 bits (299),  Expect = 1e-25, Method: Compositional matrix adjust.
 Identities = 59/59 (100%), Positives = 59/59 (100%), Gaps = 0/59 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59
           MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS
Sbjct  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59


>gi|31792097|ref|NP_854590.1| hypothetical protein Mb0933 [Mycobacterium bovis AF2122/97]
 gi|121636832|ref|YP_977055.1| hypothetical protein BCG_0961 [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 gi|224989303|ref|YP_002643990.1| hypothetical protein JTY_0931 [Mycobacterium bovis BCG str. Tokyo 
172]
 16 more sequence titles
 Length=59

 Score =  117 bits (292),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 58/59 (99%), Positives = 58/59 (99%), Gaps = 0/59 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59
           MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKL DAASNVVGMSDQQS
Sbjct  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLQDAASNVVGMSDQQS  59


>gi|289573537|ref|ZP_06453764.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289537968|gb|EFD42546.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=50

 Score = 98.6 bits (244),  Expect = 2e-19, Method: Compositional matrix adjust.
 Identities = 48/50 (96%), Positives = 49/50 (98%), Gaps = 0/50 (0%)

Query  10  LLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59
           +LSQNADKVETVINKAGEFVDEQTQGNYSDAIHKL DAASNVVGMSDQQS
Sbjct  1   MLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLQDAASNVVGMSDQQS  50


>gi|240172908|ref|ZP_04751567.1| hypothetical protein MkanA1_26582 [Mycobacterium kansasii ATCC 
12478]
Length=59

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 40/59 (68%), Positives = 49/59 (84%), Gaps = 0/59 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59
           MGI+DK K+LLSQNADKVETVI+KAG+FVD++TQG YSD IHK+ + A  VV   DQQ+
Sbjct  1   MGIMDKAKDLLSQNADKVETVIDKAGKFVDDKTQGKYSDTIHKVQEQAKKVVDTGDQQN  59


>gi|118616056|ref|YP_904388.1| hypothetical protein MUL_0161 [Mycobacterium ulcerans Agy99]
 gi|183984587|ref|YP_001852878.1| hypothetical protein MMAR_4620 [Mycobacterium marinum M]
 gi|118568166|gb|ABL02917.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
 gi|183177913|gb|ACC43023.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=62

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 38/53 (72%), Positives = 45/53 (85%), Gaps = 0/53 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           MGILDK K+LL+QNADKVETVI+KAGEFVDE+T+G YSD IHK+ + A  V G
Sbjct  1   MGILDKAKDLLAQNADKVETVIDKAGEFVDEKTEGKYSDTIHKVQEGAKKVAG  53


>gi|254822962|ref|ZP_05227963.1| hypothetical protein MintA_23744 [Mycobacterium intracellulare 
ATCC 13950]
Length=62

 Score = 81.3 bits (199),  Expect = 5e-14, Method: Compositional matrix adjust.
 Identities = 37/56 (67%), Positives = 44/56 (79%), Gaps = 0/56 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSD  56
           MG LDK K+LLSQNADKVET I+KAGEFVDE+TQG YSD IH++ + A    G +D
Sbjct  1   MGFLDKAKDLLSQNADKVETAIDKAGEFVDEKTQGKYSDTIHQVQEQAKKAAGAAD  56


>gi|41406942|ref|NP_959778.1| hypothetical protein MAP0844 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118464529|ref|YP_880288.1| hypothetical protein MAV_1032 [Mycobacterium avium 104]
 gi|254773919|ref|ZP_05215435.1| hypothetical protein MaviaA2_04482 [Mycobacterium avium subsp. 
avium ATCC 25291]
 gi|41395292|gb|AAS03161.1| hypothetical protein MAP_0844 [Mycobacterium avium subsp. paratuberculosis 
K-10]
 gi|118165816|gb|ABK66713.1| conserved hypothetical protein [Mycobacterium avium 104]
 gi|336461276|gb|EGO40150.1| hypothetical protein MAPs_32210 [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=62

 Score = 77.4 bits (189),  Expect = 6e-13, Method: Compositional matrix adjust.
 Identities = 35/56 (63%), Positives = 43/56 (77%), Gaps = 0/56 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSD  56
           MG LDK K+LLSQNADKVE  I+KAGEFVDE+TQG YSD IH++ + A    G ++
Sbjct  1   MGFLDKAKDLLSQNADKVEMAIDKAGEFVDEKTQGKYSDTIHQVQEQAKKATGATE  56


>gi|342860515|ref|ZP_08717166.1| hypothetical protein MCOL_16611 [Mycobacterium colombiense CECT 
3035]
 gi|342132170|gb|EGT85411.1| hypothetical protein MCOL_16611 [Mycobacterium colombiense CECT 
3035]
Length=62

 Score = 75.9 bits (185),  Expect = 2e-12, Method: Compositional matrix adjust.
 Identities = 34/56 (61%), Positives = 43/56 (77%), Gaps = 0/56 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSD  56
           MG LDK K+LLSQNADKVE  I+KAGEFVD++TQG Y+D IH++ + A    G +D
Sbjct  1   MGFLDKAKDLLSQNADKVEMAIDKAGEFVDDKTQGKYTDTIHQVQEQAKKATGAAD  56


>gi|296169667|ref|ZP_06851285.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895664|gb|EFG75360.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=62

 Score = 72.8 bits (177),  Expect = 2e-11, Method: Compositional matrix adjust.
 Identities = 34/45 (76%), Positives = 38/45 (85%), Gaps = 0/45 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLH  45
           MG LDK K+LLSQNADKVET I+KAGEFVD +TQG YSD IHK+ 
Sbjct  1   MGFLDKAKDLLSQNADKVETAIDKAGEFVDGKTQGKYSDTIHKVQ  45


>gi|118470721|ref|YP_889869.1| hypothetical protein MSMEG_5635 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118172008|gb|ABK72904.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=62

 Score = 72.0 bits (175),  Expect = 3e-11, Method: Compositional matrix adjust.
 Identities = 34/58 (59%), Positives = 43/58 (75%), Gaps = 0/58 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQ  58
           MG LDK K+LLSQNADKV+TVI+KAG+ +DE+TQG Y+  + K  DAA N +   D Q
Sbjct  1   MGFLDKAKDLLSQNADKVDTVIDKAGDMIDEKTQGKYAQHVDKAQDAAKNAIHKDDPQ  58


>gi|145222349|ref|YP_001133027.1| hypothetical protein Mflv_1759 [Mycobacterium gilvum PYR-GCK]
 gi|315442782|ref|YP_004075661.1| hypothetical protein Mspyr1_11430 [Mycobacterium sp. Spyr1]
 gi|145214835|gb|ABP44239.1| hypothetical protein Mflv_1759 [Mycobacterium gilvum PYR-GCK]
 gi|315261085|gb|ADT97826.1| hypothetical protein Mspyr1_11430 [Mycobacterium sp. Spyr1]
Length=98

 Score = 67.0 bits (162),  Expect = 9e-10, Method: Compositional matrix adjust.
 Identities = 31/52 (60%), Positives = 40/52 (77%), Gaps = 0/52 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           MG LDK K+LLS+NADKV+TVI+KAG  VD++TQG YS  + K+ +AA   V
Sbjct  1   MGFLDKAKDLLSKNADKVDTVIDKAGNLVDKKTQGKYSSTVDKVQEAARKAV  52


>gi|120405937|ref|YP_955766.1| hypothetical protein Mvan_4988 [Mycobacterium vanbaalenii PYR-1]
 gi|119958755|gb|ABM15760.1| hypothetical protein Mvan_4988 [Mycobacterium vanbaalenii PYR-1]
Length=90

 Score = 66.2 bits (160),  Expect = 1e-09, Method: Compositional matrix adjust.
 Identities = 30/52 (58%), Positives = 41/52 (79%), Gaps = 0/52 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           MG LDK K+LLS+NADKV+TVI+KAG+ VD++TQG Y+  + K+ +AA   V
Sbjct  1   MGFLDKAKDLLSKNADKVDTVIDKAGDLVDKKTQGKYASTVDKVQEAAKKAV  52


>gi|15828136|ref|NP_302399.1| hypothetical protein ML2114 [Mycobacterium leprae TN]
 gi|221230613|ref|YP_002504029.1| hypothetical protein MLBr_02114 [Mycobacterium leprae Br4923]
 gi|13093690|emb|CAC31069.1| conserved hypothetical protein [Mycobacterium leprae]
 gi|219933720|emb|CAR72211.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=56

 Score = 61.2 bits (147),  Expect = 5e-08, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 37/42 (89%), Gaps = 0/42 (0%)

Query  3   ILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKL  44
           +LDK K++L QNADKVETV++KAGEFVDE+ +G Y+D I+++
Sbjct  1   MLDKAKDILVQNADKVETVLDKAGEFVDEKAKGKYTDTIYQV  42


>gi|108801390|ref|YP_641587.1| hypothetical protein Mmcs_4427 [Mycobacterium sp. MCS]
 gi|119870543|ref|YP_940495.1| hypothetical protein Mkms_4514 [Mycobacterium sp. KMS]
 gi|126437373|ref|YP_001073064.1| hypothetical protein Mjls_4808 [Mycobacterium sp. JLS]
 gi|108771809|gb|ABG10531.1| hypothetical protein Mmcs_4427 [Mycobacterium sp. MCS]
 gi|119696632|gb|ABL93705.1| conserved hypothetical protein [Mycobacterium sp. KMS]
 gi|126237173|gb|ABO00574.1| hypothetical protein Mjls_4808 [Mycobacterium sp. JLS]
Length=76

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 24/52 (47%), Positives = 35/52 (68%), Gaps = 0/52 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           M  LDKVKN +S+N DK  + I KAG+  D++T+G Y+D ++K   AA + V
Sbjct  1   MAFLDKVKNWVSKNPDKAGSAIEKAGDLFDQKTKGKYADKVNKAQSAAKDYV  52


>gi|296392776|ref|YP_003657660.1| hypothetical protein Srot_0342 [Segniliparus rotundus DSM 44985]
 gi|296179923|gb|ADG96829.1| conserved hypothetical protein [Segniliparus rotundus DSM 44985]
Length=60

 Score = 53.1 bits (126),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 22/49 (45%), Positives = 34/49 (70%), Gaps = 0/49 (0%)

Query  2   GILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASN  50
           G L+KVK+ + ++  KVE  I+KAG+ +D+QTQG Y+D + K+ D A  
Sbjct  3   GFLEKVKSFIKKDPAKVEQAIDKAGDLIDKQTQGKYADKVDKVQDVAKK  51


>gi|38232733|ref|NP_938500.1| hypothetical protein DIP0103 [Corynebacterium diphtheriae NCTC 
13129]
 gi|38198991|emb|CAE48608.1| Conserved hypothetical protein [Corynebacterium diphtheriae]
Length=55

 Score = 50.4 bits (119),  Expect = 8e-05, Method: Compositional matrix adjust.
 Identities = 20/47 (43%), Positives = 37/47 (79%), Gaps = 0/47 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDA  47
           M IL+K K+L++ N+DKV+  ++KAG+F+D +T+G Y+D + ++ +A
Sbjct  1   MDILNKAKDLINNNSDKVKEAVDKAGDFIDSKTEGKYADKVDQVQEA  47


>gi|54022643|ref|YP_116885.1| hypothetical protein nfa6760 [Nocardia farcinica IFM 10152]
 gi|54014151|dbj|BAD55521.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=72

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 23/51 (46%), Positives = 34/51 (67%), Gaps = 0/51 (0%)

Query  2   GILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           G++ K K   ++N+DK+   ++KAG F+D++TQG YSD I K   AA  VV
Sbjct  11  GLIGKGKEAAAKNSDKINQAVDKAGTFLDQKTQGKYSDKIEKGKQAAKKVV  61


>gi|302329772|gb|ADL19966.1| Hypothetical protein Cp1002_0058 [Corynebacterium pseudotuberculosis 
1002]
 gi|340539551|gb|ADL09556.2| Hypothetical protein CpC231_0057 [Corynebacterium pseudotuberculosis 
C231]
 gi|341823886|gb|AEK91407.1| Hypothetical protein CpPAT10_0059 [Corynebacterium pseudotuberculosis 
PAT10]
Length=66

 Score = 50.1 bits (118),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 33/47 (71%), Gaps = 0/47 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDA  47
           M IL+K K LL QNADKV+  + K G+ VDE+T G ++D + ++ +A
Sbjct  12  MDILNKAKELLDQNADKVKDAVEKVGDLVDEKTDGKFADKVDQVQEA  58


>gi|300857477|ref|YP_003782460.1| hypothetical protein cpfrc_00060 [Corynebacterium pseudotuberculosis 
FRC41]
 gi|337289704|ref|YP_004628725.1| hypothetical protein CULC22_00087 [Corynebacterium ulcerans BR-AD22]
 gi|300684931|gb|ADK27853.1| hypothetical protein cpfrc_00060 [Corynebacterium pseudotuberculosis 
FRC41]
 gi|308275454|gb|ADO25353.1| Conserved hypothetical protein [Corynebacterium pseudotuberculosis 
I19]
 gi|334695834|gb|AEG80631.1| hypothetical protein CULC809_00090 [Corynebacterium ulcerans 
809]
 gi|334698010|gb|AEG82806.1| hypothetical protein CULC22_00087 [Corynebacterium ulcerans BR-AD22]
Length=55

 Score = 49.7 bits (117),  Expect = 1e-04, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 33/47 (71%), Gaps = 0/47 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDA  47
           M IL+K K LL QNADKV+  + K G+ VDE+T G ++D + ++ +A
Sbjct  1   MDILNKAKELLDQNADKVKDAVEKVGDLVDEKTDGKFADKVDQVQEA  47


>gi|169628061|ref|YP_001701710.1| hypothetical protein MAB_0964 [Mycobacterium abscessus ATCC 19977]
 gi|169240028|emb|CAM61056.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=71

 Score = 49.3 bits (116),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 22/51 (44%), Positives = 35/51 (69%), Gaps = 0/51 (0%)

Query  2   GILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           G++DK+K+LL+ N DKV   ++K G+ +D +T G YS  + K+ DAA + V
Sbjct  6   GLIDKLKSLLAGNKDKVNEAVDKVGDTIDSKTGGKYSAVVDKVQDAAKSAV  56


>gi|269127490|ref|YP_003300860.1| hypothetical protein Tcur_3283 [Thermomonospora curvata DSM 43183]
 gi|268312448|gb|ACY98822.1| hypothetical protein Tcur_3283 [Thermomonospora curvata DSM 43183]
Length=67

 Score = 48.1 bits (113),  Expect = 4e-04, Method: Compositional matrix adjust.
 Identities = 23/52 (45%), Positives = 34/52 (66%), Gaps = 0/52 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           M I+ KVK +L Q++DK +  + KAG+ VD++T G YS  + K   AAS+ V
Sbjct  1   MSIVSKVKQMLGQHSDKAKKGVEKAGDMVDQRTGGRYSQHVDKGQRAASDYV  52


>gi|54023698|ref|YP_117940.1| hypothetical protein nfa17300 [Nocardia farcinica IFM 10152]
 gi|54015206|dbj|BAD56576.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=71

 Score = 48.1 bits (113),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 22/59 (38%), Positives = 37/59 (63%), Gaps = 0/59 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQS  59
           M I+DK+K L+ +N D+V+  I+KAG+  D++T G Y+D + K    A + +   +QQ 
Sbjct  13  MSIIDKLKELVGKNPDRVKGGIDKAGDMFDQRTGGKYADHVDKGQQKAKDYLDRPNQQP  71


>gi|54022645|ref|YP_116887.1| hypothetical protein nfa6780 [Nocardia farcinica IFM 10152]
 gi|54014153|dbj|BAD55523.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=74

 Score = 47.8 bits (112),  Expect = 6e-04, Method: Compositional matrix adjust.
 Identities = 22/47 (47%), Positives = 32/47 (69%), Gaps = 0/47 (0%)

Query  6   KVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           K  +L +QNADKV+ VI+KAG+ VDE+T G ++  +    DAA N +
Sbjct  24  KAMDLAAQNADKVDAVIDKAGDLVDEKTGGKFAGQVDAAQDAAKNAI  70


>gi|29829019|ref|NP_823653.1| hypothetical protein SAV_2477 [Streptomyces avermitilis MA-4680]
 gi|29606125|dbj|BAC70188.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length=91

 Score = 47.4 bits (111),  Expect = 7e-04, Method: Compositional matrix adjust.
 Identities = 21/38 (56%), Positives = 28/38 (74%), Gaps = 0/38 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIH  42
           DKV +L  Q+ DKVE  ++KA + VDE+T+G YSD IH
Sbjct  16  DKVSDLAQQHGDKVERGLDKAAKMVDEKTKGKYSDKIH  53


>gi|312138500|ref|YP_004005836.1| hypothetical protein REQ_10500 [Rhodococcus equi 103S]
 gi|325676214|ref|ZP_08155894.1| hypothetical protein HMPREF0724_13677 [Rhodococcus equi ATCC 
33707]
 gi|311887839|emb|CBH47151.1| conserved hypothetical protein [Rhodococcus equi 103S]
 gi|325552998|gb|EGD22680.1| hypothetical protein HMPREF0724_13677 [Rhodococcus equi ATCC 
33707]
Length=63

 Score = 46.6 bits (109),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 25/59 (43%), Positives = 37/59 (63%), Gaps = 7/59 (11%)

Query  1   MGILDKVKNLL-------SQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           MG +D VK L+       ++++DKV+ VI+KA +  D++T G YSD I K  +AA  VV
Sbjct  1   MGFMDSVKGLVNKGQELAAEHSDKVQGVIDKAADLADDKTGGKYSDKIDKAAEAAKKVV  59


>gi|328885511|emb|CCA58750.1| hypothetical protein SVEN_5464 [Streptomyces venezuelae ATCC 
10712]
Length=111

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 22/48 (46%), Positives = 30/48 (63%), Gaps = 0/48 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           DKV +L  Q+ DK++  I+KA   VDE+T+G YSD IH   D A +  
Sbjct  16  DKVADLAQQHGDKIDHGIDKAARLVDEKTKGKYSDKIHSGTDKAKDCC  63


>gi|29122983|gb|AAO65787.1|AF440781_6 hypothetical protein [Streptomyces cinnamonensis]
Length=62

 Score = 46.2 bits (108),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 25/58 (44%), Positives = 35/58 (61%), Gaps = 1/58 (1%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQQ  58
           M ++DK+K +L  + DK    I+KAG+FVD +TQG YS  +    D   +  G SDQQ
Sbjct  1   MTVMDKLKQMLKGHEDKAGQGIDKAGDFVDGKTQGKYSGQVDTAQDKLRDQFG-SDQQ  57


>gi|317507694|ref|ZP_07965401.1| hypothetical protein HMPREF9336_01773 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316254021|gb|EFV13384.1| hypothetical protein HMPREF9336_01773 [Segniliparus rugosus ATCC 
BAA-974]
Length=60

 Score = 44.7 bits (104),  Expect = 0.004, Method: Compositional matrix adjust.
 Identities = 18/40 (45%), Positives = 28/40 (70%), Gaps = 0/40 (0%)

Query  2   GILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAI  41
           G+ D+VK  + ++  KVE  I K G+FVD++T+G YS A+
Sbjct  3   GLFDQVKGFIKKDPSKVEQAIEKVGDFVDKKTEGKYSGAV  42


>gi|85813955|emb|CAF31578.1| possible kanamycin biosynthetic protein [Streptomyces kanamyceticus]
Length=64

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 20/53 (38%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           M ++DK+K +L  + D+    I+KAG+FVD++TQG YS  +    D     +G
Sbjct  1   MSVMDKLKQMLKGHEDQAGKGIDKAGDFVDDKTQGKYSSQVDTAQDKLKEQLG  53


>gi|289425316|ref|ZP_06427093.1| conserved hypothetical protein [Propionibacterium acnes SK187]
 gi|289427070|ref|ZP_06428786.1| conserved hypothetical protein [Propionibacterium acnes J165]
 gi|295130578|ref|YP_003581241.1| hypothetical protein HMPREF0675_4077 [Propionibacterium acnes 
SK137]
 40 more sequence titles
 Length=66

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 23/49 (47%), Positives = 33/49 (68%), Gaps = 0/49 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           D +KN  SQ++D+VE  I+KAG  VD++T G +SD I K  DA  + +G
Sbjct  16  DDIKNQASQHSDQVEQGIDKAGNTVDDKTGGKFSDQIDKGQDALKDKLG  64


>gi|50842501|ref|YP_055728.1| hypothetical protein PPA1018 [Propionibacterium acnes KPA171202]
 gi|335051735|ref|ZP_08544646.1| hypothetical protein HMPREF9947_1499 [Propionibacterium sp. 409-HC1]
 gi|335053787|ref|ZP_08546617.1| hypothetical protein HMPREF9948_1584 [Propionibacterium sp. 434-HC2]
 26 more sequence titles
 Length=66

 Score = 44.3 bits (103),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 23/49 (47%), Positives = 33/49 (68%), Gaps = 0/49 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           D +KN  SQ++D+VE  I+KAG  VD++T G +SD I K  DA  + +G
Sbjct  16  DDIKNQASQHSDQVEQGIDKAGNAVDDKTGGKFSDQIDKGQDALKDKLG  64


>gi|282854034|ref|ZP_06263371.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|282583487|gb|EFB88867.1| conserved hypothetical protein [Propionibacterium acnes J139]
 gi|314923001|gb|EFS86832.1| conserved hypothetical protein [Propionibacterium acnes HL001PA1]
 6 more sequence titles
 Length=66

 Score = 43.9 bits (102),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 23/49 (47%), Positives = 33/49 (68%), Gaps = 0/49 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           D +KN  SQ++D+VE  I+KAG  VD++T G +SD I K  DA  + +G
Sbjct  16  DDIKNQASQHSDQVEQGIDKAGNAVDDKTGGKFSDQIDKGQDALKDKLG  64


>gi|333920601|ref|YP_004494182.1| hypothetical protein AS9A_2935 [Amycolicicoccus subflavus DQS3-9A1]
 gi|333482822|gb|AEF41382.1| hypothetical protein AS9A_2935 [Amycolicicoccus subflavus DQS3-9A1]
Length=88

 Score = 43.5 bits (101),  Expect = 0.010, Method: Compositional matrix adjust.
 Identities = 19/53 (36%), Positives = 32/53 (61%), Gaps = 0/53 (0%)

Query  3   ILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMS  55
           + +K K L+ +N ++V TVI +  E VD+ T G YS+ IH+  D     +G++
Sbjct  6   LFNKAKGLVQKNPERVRTVIERVEETVDKTTGGKYSEKIHQAADTVEERLGVA  58


>gi|328883797|emb|CCA57036.1| hypothetical protein; SCN_6 [Streptomyces venezuelae ATCC 10712]
Length=67

 Score = 43.5 bits (101),  Expect = 0.011, Method: Compositional matrix adjust.
 Identities = 21/57 (37%), Positives = 33/57 (58%), Gaps = 0/57 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSDQ  57
           M +LDK+K +L  + DK    ++KAG+FVD +TQG YS  +    +     +G + Q
Sbjct  1   MSMLDKLKGMLKGHEDKASQGVDKAGDFVDGKTQGKYSSQVDTAQEKLKEQLGGTGQ  57


>gi|119962152|ref|YP_947569.1| hypothetical protein AAur_1810 [Arthrobacter aurescens TC1]
 gi|119949011|gb|ABM07922.1| hypothetical protein AAur_1810 [Arthrobacter aurescens TC1]
Length=100

 Score = 43.1 bits (100),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 22/63 (35%), Positives = 39/63 (62%), Gaps = 4/63 (6%)

Query  1   MGILD----KVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSD  56
           +G++D    K + L+  N + ++  I KAG+FVD++T G Y+  + K+ +AAS+ V  +D
Sbjct  26  VGLIDDLKGKAQGLIQGNEEAIKNGIEKAGDFVDQKTGGKYAGHVDKVQNAASDFVAKND  85

Query  57  QQS  59
            Q 
Sbjct  86  GQP  88


>gi|295836158|ref|ZP_06823091.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197695254|gb|EDY42187.1| conserved hypothetical protein [Streptomyces sp. SPB74]
Length=102

 Score = 43.1 bits (100),  Expect = 0.013, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 31/49 (64%), Gaps = 0/49 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           DKV +L  Q+ D++   ++KA + VDE+T+G YSD I    D A + VG
Sbjct  16  DKVADLAQQHGDRIGDGLDKAAKAVDERTKGKYSDRIQSGTDKAKDAVG  64


>gi|220912429|ref|YP_002487738.1| hypothetical protein Achl_1662 [Arthrobacter chlorophenolicus 
A6]
 gi|219859307|gb|ACL39649.1| hypothetical protein Achl_1662 [Arthrobacter chlorophenolicus 
A6]
Length=87

 Score = 42.7 bits (99),  Expect = 0.016, Method: Compositional matrix adjust.
 Identities = 21/56 (38%), Positives = 34/56 (61%), Gaps = 4/56 (7%)

Query  1   MGILD----KVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           MG++D    K + L+  N   ++  I KAG+FVD++T G Y+  + K+ D AS +V
Sbjct  1   MGLIDDLKGKAQGLIRGNEQTIKDGITKAGDFVDQKTGGKYAGHVDKIQDGASKLV  56


>gi|340775488|gb|EGR97541.1| hypothetical protein HMPREF1162_0370 [Propionibacterium acnes 
SK182B-JCVI]
Length=66

 Score = 42.4 bits (98),  Expect = 0.023, Method: Compositional matrix adjust.
 Identities = 22/49 (45%), Positives = 32/49 (66%), Gaps = 0/49 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVG  53
           D +KN  SQ++D+VE  I+KAG+ VD +T G +SD + K  DA    +G
Sbjct  16  DDIKNQASQHSDQVEQGIDKAGDAVDNKTGGKFSDQVDKGQDALKGKLG  64


>gi|325963038|ref|YP_004240944.1| hypothetical protein Asphe3_16410 [Arthrobacter phenanthrenivorans 
Sphe3]
 gi|323469125|gb|ADX72810.1| hypothetical protein Asphe3_16410 [Arthrobacter phenanthrenivorans 
Sphe3]
Length=87

 Score = 42.4 bits (98),  Expect = 0.026, Method: Compositional matrix adjust.
 Identities = 21/56 (38%), Positives = 33/56 (59%), Gaps = 4/56 (7%)

Query  1   MGILD----KVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           MG++D    K + L+  N   ++  INKAG+FVD +T G YS  + K+   AS ++
Sbjct  1   MGLIDDLKGKAQGLIRGNEQAIKNGINKAGDFVDTKTGGKYSGHVDKIQHGASKLI  56


>gi|326333224|ref|ZP_08199471.1| hypothetical protein NBCG_04661 [Nocardioidaceae bacterium Broad-1]
 gi|325948868|gb|EGD40961.1| hypothetical protein NBCG_04661 [Nocardioidaceae bacterium Broad-1]
Length=60

 Score = 42.0 bits (97),  Expect = 0.028, Method: Compositional matrix adjust.
 Identities = 23/52 (45%), Positives = 32/52 (62%), Gaps = 5/52 (9%)

Query  4   LDKVKNLLSQN-----ADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASN  50
           +DK K+L+ Q      ADKV   ++KAGEF DE+T G +SD I +  + A N
Sbjct  1   MDKAKDLIGQGVDKVGADKVGEGLDKAGEFADEKTGGKFSDQIDQGVETAKN  52


>gi|116670229|ref|YP_831162.1| hypothetical protein Arth_1668 [Arthrobacter sp. FB24]
 gi|116610338|gb|ABK03062.1| hypothetical protein Arth_1668 [Arthrobacter sp. FB24]
Length=85

 Score = 42.0 bits (97),  Expect = 0.031, Method: Compositional matrix adjust.
 Identities = 22/63 (35%), Positives = 34/63 (54%), Gaps = 4/63 (6%)

Query  1   MGILD----KVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGMSD  56
           MGILD    K + L+  N   ++  I KAG+F+D +T G Y+D I  +   A+ +V   D
Sbjct  1   MGILDDLKGKAQRLVGGNEQAIKDGIGKAGDFIDSKTGGKYADKIDTVQKGAAGLVDKVD  60

Query  57  QQS  59
            + 
Sbjct  61  PKP  63


>gi|284030939|ref|YP_003380870.1| hypothetical protein Kfla_3007 [Kribbella flavida DSM 17836]
 gi|283810232|gb|ADB32071.1| hypothetical protein Kfla_3007 [Kribbella flavida DSM 17836]
Length=216

 Score = 41.6 bits (96),  Expect = 0.037, Method: Compositional matrix adjust.
 Identities = 19/48 (40%), Positives = 31/48 (65%), Gaps = 4/48 (8%)

Query  7   VKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVVGM  54
           ++N++ QN DK++  + KAG+ +D+QT G Y+D +    DAA   VG 
Sbjct  12  LRNVVKQNPDKIKAGVEKAGDLIDKQTGGKYADKV----DAAQGKVGQ  55


>gi|333024039|ref|ZP_08452103.1| hypothetical protein STTU_1542 [Streptomyces sp. Tu6071]
 gi|332743891|gb|EGJ74332.1| hypothetical protein STTU_1542 [Streptomyces sp. Tu6071]
Length=97

 Score = 41.6 bits (96),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 30/48 (63%), Gaps = 0/48 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           DKV +L  Q+ DK+   ++KA + VDE+T+G YSD I    D A + V
Sbjct  16  DKVTDLAQQHGDKIGDGLDKAAKTVDERTKGKYSDRIQSGTDKAKDAV  63


>gi|318059596|ref|ZP_07978319.1| hypothetical protein SSA3_16736 [Streptomyces sp. SA3_actG]
 gi|318075960|ref|ZP_07983292.1| hypothetical protein SSA3_04417 [Streptomyces sp. SA3_actF]
Length=92

 Score = 41.6 bits (96),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 30/48 (63%), Gaps = 0/48 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           DKV +L  Q+ DK+   ++KA + VDE+T+G YSD I    D A + V
Sbjct  16  DKVADLAQQHGDKIGDGLDKAAKTVDERTKGKYSDRIQSGTDKAKDAV  63


>gi|302522289|ref|ZP_07274631.1| conserved hypothetical protein [Streptomyces sp. SPB78]
 gi|302431184|gb|EFL03000.1| conserved hypothetical protein [Streptomyces sp. SPB78]
Length=97

 Score = 41.6 bits (96),  Expect = 0.042, Method: Compositional matrix adjust.
 Identities = 21/48 (44%), Positives = 30/48 (63%), Gaps = 0/48 (0%)

Query  5   DKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAASNVV  52
           DKV +L  Q+ DK+   ++KA + VDE+T+G YSD I    D A + V
Sbjct  16  DKVADLAQQHGDKIGDGLDKAAKTVDERTKGKYSDRIQSGTDKAKDAV  63


>gi|345015483|ref|YP_004817837.1| hypothetical protein Strvi_8237 [Streptomyces violaceusniger 
Tu 4113]
 gi|344041832|gb|AEM87557.1| hypothetical protein Strvi_8237 [Streptomyces violaceusniger 
Tu 4113]
Length=62

 Score = 41.2 bits (95),  Expect = 0.045, Method: Compositional matrix adjust.
 Identities = 18/46 (40%), Positives = 26/46 (57%), Gaps = 0/46 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHKLHD  46
           MG++DK+K  +S+N DK      K  E  D++T G YS+ I    D
Sbjct  1   MGMMDKLKGAISKNPDKARKGTRKGAEAADKKTGGKYSEQIQSGSD  46


>gi|284032608|ref|YP_003382539.1| hypothetical protein Kfla_4723 [Kribbella flavida DSM 17836]
 gi|283811901|gb|ADB33740.1| hypothetical protein Kfla_4723 [Kribbella flavida DSM 17836]
Length=80

 Score = 41.2 bits (95),  Expect = 0.050, Method: Compositional matrix adjust.
 Identities = 18/42 (43%), Positives = 29/42 (70%), Gaps = 0/42 (0%)

Query  2   GILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYSDAIHK  43
           G+ DK  +L+ Q+ DKV   ++KAG+FVD++T G + D I +
Sbjct  13  GLKDKATDLVDQHGDKVGGGLDKAGDFVDDKTGGKHGDKIDR  54


>gi|320006828|gb|ADW01678.1| hypothetical protein Sfla_0210 [Streptomyces flavogriseus ATCC 
33331]
Length=64

 Score = 40.4 bits (93),  Expect = 0.079, Method: Compositional matrix adjust.
 Identities = 18/38 (48%), Positives = 26/38 (69%), Gaps = 0/38 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYS  38
           M  LDK+K +L  + D+    I+KAG+ VD++TQG YS
Sbjct  1   MSALDKIKKMLKGHEDQAGKGIDKAGDMVDDRTQGKYS  38


>gi|297194740|ref|ZP_06912138.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
 gi|197722952|gb|EDY66860.1| conserved hypothetical protein [Streptomyces pristinaespiralis 
ATCC 25486]
Length=68

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 16/38 (43%), Positives = 28/38 (74%), Gaps = 0/38 (0%)

Query  1   MGILDKVKNLLSQNADKVETVINKAGEFVDEQTQGNYS  38
           M ++DK+KN+L  + ++ +  I KAG++VD +TQG +S
Sbjct  1   MSMMDKLKNMLKGHPEQTDRGIEKAGDYVDGRTQGKHS  38


>gi|309812132|ref|ZP_07705890.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
 gi|308433819|gb|EFP57693.1| conserved hypothetical protein [Dermacoccus sp. Ellin185]
Length=63

 Score = 40.0 bits (92),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 21/53 (40%), Positives = 32/53 (61%), Gaps = 4/53 (7%)

Query  1   MGILDKVKNLLSQ----NADKVETVINKAGEFVDEQTQGNYSDAIHKLHDAAS  49
           MGI D  K+  S+    N DK++  + KAG+F D++T G ++D I K  D A+
Sbjct  1   MGIFDSAKDKASEFAQDNPDKLDQGVEKAGDFADDKTGGQHADQIDKGQDFAN  53



Lambda     K      H
   0.308    0.125    0.327 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 127777262724




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40