BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0912
Length=149
Score E
Sequences producing significant alignments: (Bits) Value
gi|253800063|ref|YP_003033064.1| hypothetical protein TBMG_03077... 288 3e-76
gi|254549891|ref|ZP_05140338.1| hypothetical protein Mtube_05416... 287 4e-76
gi|15608052|ref|NP_215427.1| transmembrane protein [Mycobacteriu... 286 5e-76
gi|167967688|ref|ZP_02549965.1| conserved transmembrane protein ... 265 2e-69
gi|183984583|ref|YP_001852874.1| hypothetical protein MMAR_4616 ... 215 1e-54
gi|118616053|ref|YP_904385.1| hypothetical protein MUL_0157 [Myc... 209 7e-53
gi|342860518|ref|ZP_08717169.1| hypothetical protein MCOL_16626 ... 209 1e-52
gi|240172905|ref|ZP_04751564.1| hypothetical protein MkanA1_2656... 201 4e-50
gi|296169669|ref|ZP_06851287.1| conserved hypothetical protein [... 196 9e-49
gi|41406944|ref|NP_959780.1| hypothetical protein MAP0846 [Mycob... 193 8e-48
gi|336461274|gb|EGO40148.1| hypothetical protein MAPs_32190 [Myc... 192 1e-47
gi|15828134|ref|NP_302397.1| hypothetical protein ML2111 [Mycoba... 185 2e-45
gi|254773921|ref|ZP_05215437.1| hypothetical protein MaviaA2_044... 171 4e-41
gi|254822965|ref|ZP_05227966.1| hypothetical protein MintA_23759... 171 5e-41
gi|15840332|ref|NP_335369.1| hypothetical protein MT0936 [Mycoba... 169 1e-40
gi|118464875|ref|YP_880290.1| hypothetical protein MAV_1034 [Myc... 167 5e-40
gi|108801344|ref|YP_641541.1| hypothetical protein Mmcs_4381 [My... 142 2e-32
gi|333989473|ref|YP_004522087.1| transmembrane protein [Mycobact... 135 3e-30
gi|118470745|ref|YP_889847.1| transmembrane protein [Mycobacteri... 129 1e-28
gi|145222394|ref|YP_001133072.1| hypothetical protein Mflv_1804 ... 115 3e-24
gi|120405894|ref|YP_955723.1| hypothetical protein Mvan_4945 [My... 99.0 2e-19
gi|169628077|ref|YP_001701726.1| hypothetical protein MAB_0980 [... 92.4 2e-17
gi|281356450|ref|ZP_06242942.1| ADP-ribosylation/Crystallin J1 [... 36.6 1.4
gi|218677225|ref|YP_002396044.1| zinc protease [Vibrio splendidu... 35.4 3.1
>gi|253800063|ref|YP_003033064.1| hypothetical protein TBMG_03077 [Mycobacterium tuberculosis KZN
1435]
gi|297730417|ref|ZP_06959535.1| hypothetical protein MtubKR_04966 [Mycobacterium tuberculosis
KZN R506]
gi|253321566|gb|ACT26169.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
Length=157
Score = 288 bits (736), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV
Sbjct 9 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 68
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA
Sbjct 69 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 128
Query 121 GGVCAVGCSLWAAVSAASPGRRRHREVVR 149
GGVCAVGCSLWAAVSAASPGRRRHREVVR
Sbjct 129 GGVCAVGCSLWAAVSAASPGRRRHREVVR 157
>gi|254549891|ref|ZP_05140338.1| hypothetical protein Mtube_05416 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|313657744|ref|ZP_07814624.1| hypothetical protein MtubKV_04956 [Mycobacterium tuberculosis
KZN V2475]
Length=164
Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV
Sbjct 16 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 75
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA
Sbjct 76 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 135
Query 121 GGVCAVGCSLWAAVSAASPGRRRHREVVR 149
GGVCAVGCSLWAAVSAASPGRRRHREVVR
Sbjct 136 GGVCAVGCSLWAAVSAASPGRRRHREVVR 164
>gi|15608052|ref|NP_215427.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31792100|ref|NP_854593.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636835|ref|YP_977058.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
44 more sequence titles
Length=149
Score = 286 bits (733), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/149 (100%), Positives = 149/149 (100%), Gaps = 0/149 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV
Sbjct 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA
Sbjct 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
Query 121 GGVCAVGCSLWAAVSAASPGRRRHREVVR 149
GGVCAVGCSLWAAVSAASPGRRRHREVVR
Sbjct 121 GGVCAVGCSLWAAVSAASPGRRRHREVVR 149
>gi|167967688|ref|ZP_02549965.1| conserved transmembrane protein [Mycobacterium tuberculosis H37Ra]
gi|294996394|ref|ZP_06802085.1| hypothetical protein Mtub2_18304 [Mycobacterium tuberculosis
210]
gi|306783587|ref|ZP_07421909.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
26 more sequence titles
Length=139
Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 138/139 (99%), Positives = 139/139 (100%), Gaps = 0/139 (0%)
Query 11 VALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG 70
+ALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG
Sbjct 1 MALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG 60
Query 71 AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL 130
AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL
Sbjct 61 AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL 120
Query 131 WAAVSAASPGRRRHREVVR 149
WAAVSAASPGRRRHREVVR
Sbjct 121 WAAVSAASPGRRRHREVVR 139
>gi|183984583|ref|YP_001852874.1| hypothetical protein MMAR_4616 [Mycobacterium marinum M]
gi|183177909|gb|ACC43019.1| conserved hypothetical transmembrane protein [Mycobacterium marinum
M]
Length=144
Score = 215 bits (548), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/141 (81%), Positives = 118/141 (84%), Gaps = 0/141 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVAL AAV+ AS WMPWLTT VGGGGW NAIG HG+LELP GFG GQLIV
Sbjct 1 MTRRLRPGWLVALFAAVMGASAWMPWLTTAVGGGGWANAIGVAHGNLELPTGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLV GAM GRGLSV+LSSIAALV+SLLIVAL WYYKLNVNPPVSAEYGLY G
Sbjct 61 LLSSTLLVAGAMVGRGLSVRLSSIAALVISLLIVALAAWYYKLNVNPPVSAEYGLYVGIG 120
Query 121 GGVCAVGCSLWAAVSAASPGR 141
VCAV CSLWA +AA GR
Sbjct 121 SAVCAVACSLWAVAAAAFGGR 141
>gi|118616053|ref|YP_904385.1| hypothetical protein MUL_0157 [Mycobacterium ulcerans Agy99]
gi|118568163|gb|ABL02914.1| conserved hypothetical transmembrane protein [Mycobacterium ulcerans
Agy99]
Length=144
Score = 209 bits (533), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 113/145 (78%), Positives = 118/145 (82%), Gaps = 1/145 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVAL AAV+ AS WMPWLTT VGGGGW NAIG HG+LELP GFG GQ IV
Sbjct 1 MTRRLRPGWLVALFAAVMGASAWMPWLTTAVGGGGWANAIGVAHGNLELPTGFGAGQQIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSS LLV GAM GRGLSV+LSSIAALV+SLLIVAL WYYKLNVNPPVSAEYGLY G
Sbjct 61 LLSSMLLVAGAMVGRGLSVRLSSIAALVISLLIVALAAWYYKLNVNPPVSAEYGLYVGIG 120
Query 121 GGVCAVGCSLWAAVSAASPGRRRHR 145
VCAV CSLW AV+AA G R R
Sbjct 121 SAVCAVACSLW-AVAAAGFGGRSTR 144
>gi|342860518|ref|ZP_08717169.1| hypothetical protein MCOL_16626 [Mycobacterium colombiense CECT
3035]
gi|342132173|gb|EGT85414.1| hypothetical protein MCOL_16626 [Mycobacterium colombiense CECT
3035]
Length=144
Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/141 (74%), Positives = 120/141 (86%), Gaps = 0/141 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVA A ++AS W+PWL TTV GGGW NAIGG HG+LELP GFG GQLIV
Sbjct 1 MTRRLRPGWLVAFFAVAVSASAWLPWLRTTVNGGGWANAIGGAHGNLELPRGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LL+STLLV+GAM GRGLSV+L+S+AAL++SLLIVALTVWYYK+NVNPPVSAEYGLY GA
Sbjct 61 LLASTLLVLGAMMGRGLSVRLASVAALLISLLIVALTVWYYKINVNPPVSAEYGLYVGAG 120
Query 121 GGVCAVGCSLWAAVSAASPGR 141
+CAV CSL A ++A + GR
Sbjct 121 AALCAVACSLVAVIAAVASGR 141
>gi|240172905|ref|ZP_04751564.1| hypothetical protein MkanA1_26567 [Mycobacterium kansasii ATCC
12478]
Length=139
Score = 201 bits (510), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 103/136 (76%), Positives = 112/136 (83%), Gaps = 0/136 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
M RRLRPGWLVAL A +++ STW+PWLTTTVGGGGW NAIGGTHG+L LP GFG GQLI
Sbjct 1 MIRRLRPGWLVALFAVIVSVSTWLPWLTTTVGGGGWANAIGGTHGNLALPPGFGAGQLIA 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLV GAM GRGLS KLSS+ ALVVSLLIVALT+WYY +NVNP VSAEYGLY G
Sbjct 61 LLSSTLLVAGAMVGRGLSAKLSSVVALVVSLLIVALTIWYYTINVNPQVSAEYGLYVGGG 120
Query 121 GGVCAVGCSLWAAVSA 136
CAV CSLWA +A
Sbjct 121 AAGCAVVCSLWAVAAA 136
>gi|296169669|ref|ZP_06851287.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895666|gb|EFG75362.1| conserved hypothetical protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=144
Score = 196 bits (498), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/130 (77%), Positives = 109/130 (84%), Gaps = 0/130 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MT RLRPGWLVA A VI+AS W+PWLTT V GGGW NAIGG HG+LELP GFG GQLIV
Sbjct 1 MTSRLRPGWLVAFFALVISASAWLPWLTTAVNGGGWANAIGGAHGNLELPPGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSS LLV GAM GRGLSV+L+S+AALV+SLLIVAL WYYKLNVNPPVSA+YGLY GA
Sbjct 61 LLSSALLVTGAMVGRGLSVRLASVAALVISLLIVALVAWYYKLNVNPPVSAQYGLYVGAG 120
Query 121 GGVCAVGCSL 130
VCAV CS+
Sbjct 121 AAVCAVVCSI 130
>gi|41406944|ref|NP_959780.1| hypothetical protein MAP0846 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395294|gb|AAS03163.1| hypothetical protein MAP_0846 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=144
Score = 193 bits (490), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/144 (75%), Positives = 120/144 (84%), Gaps = 0/144 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVAL A +I+AS W+PWL TTV GGGW NAIGG HG+LELP GFG GQLIV
Sbjct 1 MTRRLRPGWLVALCAVLISASAWLPWLRTTVNGGGWANAIGGAHGNLELPRGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LL+STLLV GAM GRGLSVK++S+AAL++SLLIVALTVWYYKLNVNPPVSAEYGLY GA
Sbjct 61 LLASTLLVAGAMMGRGLSVKVASVAALLISLLIVALTVWYYKLNVNPPVSAEYGLYVGAG 120
Query 121 GGVCAVGCSLWAAVSAASPGRRRH 144
G CAV CS+ A ++ GR R
Sbjct 121 GAACAVACSMVATIAVLVSGRSRR 144
>gi|336461274|gb|EGO40148.1| hypothetical protein MAPs_32190 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=144
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/144 (74%), Positives = 119/144 (83%), Gaps = 0/144 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
MTRRLRPGWLVAL A +I+AS W+PWL TTV GGGW NAIGG HG+LELP GFG GQLIV
Sbjct 1 MTRRLRPGWLVALCAVLISASAWLPWLRTTVNGGGWANAIGGAHGNLELPRGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LL+STLLV GAM GRGLSVK++S+AAL++SLLIVALTVWYYKLNVNPPVSAEYGLY GA
Sbjct 61 LLASTLLVAGAMMGRGLSVKVASVAALLISLLIVALTVWYYKLNVNPPVSAEYGLYVGAG 120
Query 121 GGVCAVGCSLWAAVSAASPGRRRH 144
G CAV S+ A ++ GR R
Sbjct 121 GAACAVARSMVATIAVLVSGRSRR 144
>gi|15828134|ref|NP_302397.1| hypothetical protein ML2111 [Mycobacterium leprae TN]
gi|221230611|ref|YP_002504027.1| hypothetical protein MLBr_02111 [Mycobacterium leprae Br4923]
gi|699312|gb|AAA63074.1| u650f [Mycobacterium leprae]
gi|13093688|emb|CAC31066.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219933718|emb|CAR72208.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=144
Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/141 (70%), Positives = 113/141 (81%), Gaps = 0/141 (0%)
Query 1 MTRRLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIV 60
M RLR GWLVA A ++ S W+PWLTT V GW NAIGGTHG+LELP GFG GQLIV
Sbjct 1 MIHRLRLGWLVAFFATIVLISVWIPWLTTKVNDEGWANAIGGTHGNLELPSGFGAGQLIV 60
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
LLSSTLLV GAM GRGLSVK++SIAAL++SLLIV + VWYY+LNVNPPV AE GLY GAA
Sbjct 61 LLSSTLLVAGAMMGRGLSVKVASIAALIISLLIVVIVVWYYQLNVNPPVVAECGLYLGAA 120
Query 121 GGVCAVGCSLWAAVSAASPGR 141
G VCA+ CS+WA ++A + GR
Sbjct 121 GAVCAMVCSVWAVIAAVAAGR 141
>gi|254773921|ref|ZP_05215437.1| hypothetical protein MaviaA2_04492 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=134
Score = 171 bits (432), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/134 (72%), Positives = 110/134 (83%), Gaps = 0/134 (0%)
Query 11 VALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG 70
+AL A +I+AS W+PWL TTV GGGW NAIGG HG+LELP GFG GQLIVLL+STLLV G
Sbjct 1 MALCAVLISASAWLPWLRTTVNGGGWANAIGGAHGNLELPRGFGAGQLIVLLASTLLVAG 60
Query 71 AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL 130
AM GRGLSVK++S+AAL++SLLIVALTVWYYKLNVNPPVSAEYGLY GA G CAV CS+
Sbjct 61 AMMGRGLSVKVASVAALLISLLIVALTVWYYKLNVNPPVSAEYGLYVGAGGAACAVACSM 120
Query 131 WAAVSAASPGRRRH 144
A ++ GR R
Sbjct 121 VAMIAVLVSGRSRR 134
>gi|254822965|ref|ZP_05227966.1| hypothetical protein MintA_23759 [Mycobacterium intracellulare
ATCC 13950]
Length=134
Score = 171 bits (432), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/134 (73%), Positives = 110/134 (83%), Gaps = 0/134 (0%)
Query 11 VALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG 70
+A A V++AS W+PWL T V GGGW NAIGG HG+LELP GFG GQLIVLL+STLLV G
Sbjct 1 MAFFAVVVSASAWLPWLRTAVNGGGWANAIGGAHGNLELPPGFGAGQLIVLLASTLLVAG 60
Query 71 AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL 130
AM GRGLSVKL+S+AAL++SLLIVALTVWYYKLNVNPPVSAEYGLY GA G VCA CS+
Sbjct 61 AMMGRGLSVKLASVAALLISLLIVALTVWYYKLNVNPPVSAEYGLYVGAGGAVCAAACSI 120
Query 131 WAAVSAASPGRRRH 144
A +SA + GR R
Sbjct 121 VAVISALASGRPRR 134
>gi|15840332|ref|NP_335369.1| hypothetical protein MT0936 [Mycobacterium tuberculosis CDC1551]
gi|13880496|gb|AAK45183.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
Length=89
Score = 169 bits (429), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 88/89 (99%), Positives = 89/89 (100%), Gaps = 0/89 (0%)
Query 61 LLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 120
+LSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA
Sbjct 1 MLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAA 60
Query 121 GGVCAVGCSLWAAVSAASPGRRRHREVVR 149
GGVCAVGCSLWAAVSAASPGRRRHREVVR
Sbjct 61 GGVCAVGCSLWAAVSAASPGRRRHREVVR 89
>gi|118464875|ref|YP_880290.1| hypothetical protein MAV_1034 [Mycobacterium avium 104]
gi|118166162|gb|ABK67059.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=129
Score = 167 bits (423), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/128 (73%), Positives = 106/128 (83%), Gaps = 0/128 (0%)
Query 17 VIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVGAMAGRG 76
+I+AS W+PWL TTV GGGW NAIGG HG+LELP GFG GQLIVLL+STLLV GAM GRG
Sbjct 2 LISASAWLPWLRTTVNGGGWANAIGGAHGNLELPRGFGAGQLIVLLASTLLVAGAMMGRG 61
Query 77 LSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSLWAAVSA 136
LSVK++S+AAL++SLLIVALTVWYYKLNVNPPVSAEYGLY GA G CAV CS+ A ++
Sbjct 62 LSVKVASVAALLISLLIVALTVWYYKLNVNPPVSAEYGLYVGAGGAACAVACSMVATIAV 121
Query 137 ASPGRRRH 144
GR R
Sbjct 122 LVSGRSRR 129
>gi|108801344|ref|YP_641541.1| hypothetical protein Mmcs_4381 [Mycobacterium sp. MCS]
gi|119870497|ref|YP_940449.1| hypothetical protein Mkms_4468 [Mycobacterium sp. KMS]
gi|126437327|ref|YP_001073018.1| hypothetical protein Mjls_4762 [Mycobacterium sp. JLS]
gi|108771763|gb|ABG10485.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696586|gb|ABL93659.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237127|gb|ABO00528.1| conserved hypothetical protein [Mycobacterium sp. JLS]
Length=139
Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/138 (60%), Positives = 100/138 (73%), Gaps = 0/138 (0%)
Query 5 LRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSS 64
LRPGWLVA AAV+A S W+PWLTT GGG +AIGGT GSL LP FG GQLIVLL+S
Sbjct 2 LRPGWLVAFCAAVLAVSAWLPWLTTDADGGGRASAIGGTVGSLVLPPRFGAGQLIVLLAS 61
Query 65 TLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVC 124
L+V GAMA RGLS + +S+AA+ +SLLI+ +T WYY++NV PV YGLY G V
Sbjct 62 ILVVAGAMAARGLSERAASVAAMAISLLILGMTAWYYRINVQTPVEPGYGLYVGGGVAVA 121
Query 125 AVGCSLWAAVSAASPGRR 142
A+ CS+W+ V+A S G R
Sbjct 122 ALLCSVWSFVAAMSRGSR 139
>gi|333989473|ref|YP_004522087.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333485442|gb|AEF34834.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=138
Score = 135 bits (339), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/134 (61%), Positives = 103/134 (77%), Gaps = 0/134 (0%)
Query 4 RLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLS 63
R+ PGWLVAL AA+++ S W+PWLTT+ GGG +AIGGT GS+ LP FG GQLIVLL+
Sbjct 3 RVHPGWLVALFAAILSVSAWLPWLTTSAHGGGRASAIGGTAGSIALPPRFGVGQLIVLLA 62
Query 64 STLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGV 123
+ LLV GAM GRGL +L+S+AALVVSL IVAL V +Y+LNV P++A YGLY GA
Sbjct 63 AVLLVAGAMIGRGLFSRLASVAALVVSLGIVALGVAFYRLNVAAPITAGYGLYIGAVSVA 122
Query 124 CAVGCSLWAAVSAA 137
A+GCS+WA +++A
Sbjct 123 GALGCSVWALLTSA 136
>gi|118470745|ref|YP_889847.1| transmembrane protein [Mycobacterium smegmatis str. MC2 155]
gi|118172032|gb|ABK72928.1| probable conserved transmembrane protein [Mycobacterium smegmatis
str. MC2 155]
Length=130
Score = 129 bits (325), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/132 (60%), Positives = 96/132 (73%), Gaps = 2/132 (1%)
Query 11 VALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSSTLLVVG 70
+AL AA++ + W+PWLTT GGG NAIGG GS+ LP GFGPGQLIVLL STL+V G
Sbjct 1 MALCAAILVVTAWLPWLTTGANGGGRANAIGGAVGSMVLPAGFGPGQLIVLLGSTLIVAG 60
Query 71 AMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGGVCAVGCSL 130
AMAG+GLS +L+S A L++SL +V LTVWYY LNV PPV+A YGLY G + A SL
Sbjct 61 AMAGQGLSERLASAAGLLISLALVGLTVWYYMLNVKPPVNAGYGLYTGGGLAILAALFSL 120
Query 131 WAAVSAASPGRR 142
WA +S + GRR
Sbjct 121 WALLS--TLGRR 130
>gi|145222394|ref|YP_001133072.1| hypothetical protein Mflv_1804 [Mycobacterium gilvum PYR-GCK]
gi|315442826|ref|YP_004075705.1| hypothetical protein Mspyr1_11880 [Mycobacterium sp. Spyr1]
gi|145214880|gb|ABP44284.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
gi|315261129|gb|ADT97870.1| hypothetical protein Mspyr1_11880 [Mycobacterium sp. Spyr1]
Length=141
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/141 (52%), Positives = 94/141 (67%), Gaps = 3/141 (2%)
Query 4 RLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGP-GQLIVLL 62
R PGWLVAL A ++A S W+PWLT GG NAIG G + +P GQL+VLL
Sbjct 3 RALPGWLVALCALIVAVSAWLPWLTAADGGRA--NAIGSVVGPMPVPPPGFGVGQLVVLL 60
Query 63 SSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGG 122
+STL+V GAMA RG+S +++S AAL +S+L+V L +WYY+L V PPV+A YGLY G A
Sbjct 61 ASTLVVSGAMAARGISGRMASTAALAISILLVVLALWYYRLYVYPPVTAGYGLYVGGAVA 120
Query 123 VCAVGCSLWAAVSAASPGRRR 143
+ AV S+WA +S S G R
Sbjct 121 LLAVVLSVWAMLSTWSTGSLR 141
>gi|120405894|ref|YP_955723.1| hypothetical protein Mvan_4945 [Mycobacterium vanbaalenii PYR-1]
gi|119958712|gb|ABM15717.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=143
Score = 99.0 bits (245), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/133 (56%), Positives = 95/133 (72%), Gaps = 2/133 (1%)
Query 4 RLRPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPH-GFGPGQLIVLL 62
R PGWLVAL A ++A + W+PWLT+ GGG NAIGG G++ +P FG GQL+VLL
Sbjct 3 RALPGWLVALCALLVAVTAWLPWLTSAEGGGR-ANAIGGVAGAMPVPPPAFGVGQLVVLL 61
Query 63 SSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLYFGAAGG 122
SSTL+V GAMA RG+S +++S AAL VS+L+V L VW+Y+L V PVSA YGLY AA
Sbjct 62 SSTLVVAGAMAARGISGRMASTAALAVSVLLVVLIVWFYRLYVYSPVSAGYGLYVAAALA 121
Query 123 VCAVGCSLWAAVS 135
+ AV S+W +S
Sbjct 122 LVAVLLSVWTMLS 134
>gi|169628077|ref|YP_001701726.1| hypothetical protein MAB_0980 [Mycobacterium abscessus ATCC 19977]
gi|169240044|emb|CAM61072.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=144
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/111 (46%), Positives = 76/111 (69%), Gaps = 0/111 (0%)
Query 6 RPGWLVALSAAVIAASTWMPWLTTTVGGGGWVNAIGGTHGSLELPHGFGPGQLIVLLSST 65
R GWL+A + VI S W+PWL T+ GGG NAIGG GS+ LP GFG GQLI+L+S+
Sbjct 3 RAGWLIAFTGLVIGFSVWLPWLRTSASGGGRANAIGGATGSVVLPAGFGAGQLILLVSAL 62
Query 66 LLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEYGLY 116
L+V G M G+ + +++ +AA ++L+++AL + YY+ N+ PP+ YG +
Sbjct 63 LVVAGCMVGQHILHRIAPVAAGALALVLLALELLYYRTNIKPPIVTGYGFW 113
>gi|281356450|ref|ZP_06242942.1| ADP-ribosylation/Crystallin J1 [Victivallis vadensis ATCC BAA-548]
gi|281317142|gb|EFB01164.1| ADP-ribosylation/Crystallin J1 [Victivallis vadensis ATCC BAA-548]
Length=640
Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 16/45 (36%), Positives = 24/45 (54%), Gaps = 4/45 (8%)
Query 100 YYKLN----VNPPVSAEYGLYFGAAGGVCAVGCSLWAAVSAASPG 140
Y+K N ++PPVS Y +F G C + +WA ++A PG
Sbjct 91 YFKRNFRRGIHPPVSGSYNNHFYHQGMGCCIRAEIWACLAAGDPG 135
>gi|218677225|ref|YP_002396044.1| zinc protease [Vibrio splendidus LGP32]
gi|218325493|emb|CAV27670.1| zinc protease [Vibrio splendidus LGP32]
Length=920
Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 26/90 (29%), Positives = 39/90 (44%), Gaps = 3/90 (3%)
Query 54 GPGQLIVLLSSTLLVVGAMAGRGLSVKLSSIAALVVSLLIVALTVWYYKLNVNPPVSAEY 113
G L+V SS V + +++S L L + VWY + NP V
Sbjct 476 GNKPLLVTASSAFSVPESQGDIVKQIQVSEDPNLQQWTLSNGIEVWYLR---NPEVGNNV 532
Query 114 GLYFGAAGGVCAVGCSLWAAVSAASPGRRR 143
G+Y+ + GG A+ SL+ A+ A P R
Sbjct 533 GVYYASEGGKSALDPSLFPALEVAIPASNR 562
Lambda K H
0.322 0.136 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130023393564
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40