BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0931c

Length=664
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608071|ref|NP_215446.1|  transmembrane serine/threonine-prot...  1335    0.0   
gi|339630994|ref|YP_004722636.1|  Ser/Thr protein kinase D [Mycob...  1332    0.0   
gi|289446501|ref|ZP_06436245.1|  transmembrane serine/threonine-p...  1332    0.0   
gi|289442346|ref|ZP_06432090.1|  transmembrane serine/threonine-p...  1332    0.0   
gi|306775061|ref|ZP_07413398.1|  transmembrane serine/threonine-p...  1266    0.0   
gi|254549912|ref|ZP_05140359.1|  transmembrane serine/threonine-p...  1246    0.0   
gi|183984546|ref|YP_001852837.1|  transmembrane serine/threonine-...   900    0.0   
gi|240171930|ref|ZP_04750589.1|  transmembrane serine/threonine-p...   898    0.0   
gi|254819498|ref|ZP_05224499.1|  PknD [Mycobacterium intracellula...   867    0.0   
gi|254776673|ref|ZP_05218189.1|  serine/threonine-protein kinase ...   845    0.0   
gi|342861478|ref|ZP_08718125.1|  PknD [Mycobacterium colombiense ...   827    0.0   
gi|118465473|ref|YP_883379.1|  serine/threonine protein kinase [M...   825    0.0   
gi|41409485|ref|NP_962321.1|  PknD [Mycobacterium avium subsp. pa...   821    0.0   
gi|333992173|ref|YP_004524787.1|  serine/threonine-protein kinase...   768    0.0   
gi|31792118|ref|NP_854611.1|  serine/threonine protein kinase D [...   729    0.0   
gi|336459649|gb|EGO38584.1|  NHL repeat protein,protein kinase fa...   682    0.0   
gi|289568901|ref|ZP_06449128.1|  transmembrane serine/threonine-p...   664    0.0   
gi|298524423|ref|ZP_07011832.1|  transmembrane serine/threonine-p...   652    0.0   
gi|333991664|ref|YP_004524278.1|  serine/threonine-protein kinase...   610    2e-172
gi|31792119|ref|NP_854612.1|  serine/threonine protein kinase D [...   566    4e-159
gi|48425401|pdb|1RWI|B  Chain B, Extracellular Domain Of Mycobact...   520    3e-145
gi|240170121|ref|ZP_04748780.1|  transmembrane serine/threonine-p...   518    1e-144
gi|240170030|ref|ZP_04748689.1|  transmembrane serine/threonine-p...   477    3e-132
gi|240171623|ref|ZP_04750282.1|  transmembrane serine/threonine-p...   439    7e-121
gi|31792458|ref|NP_854951.1|  transmembrane serine/threonine-prot...   422    8e-116
gi|121637194|ref|YP_977417.1|  putative transmembrane serine/thre...   422    8e-116
gi|289569275|ref|ZP_06449502.1|  predicted protein [Mycobacterium...   419    8e-115
gi|289442704|ref|ZP_06432448.1|  transmembrane serine/threonine-p...   419    9e-115
gi|289749818|ref|ZP_06509196.1|  LOW QUALITY PROTEIN: transmembra...   418    1e-114
gi|339294249|gb|AEJ46360.1|  transmembrane serine/threonine-prote...   418    1e-114
gi|340626281|ref|YP_004744733.1|  putative serine/threonine-prote...   418    1e-114
gi|340626279|ref|YP_004744731.1|  putative transmembrane serine/t...   418    2e-114
gi|339297889|gb|AEJ49999.1|  putative transmembrane serine/threon...   418    2e-114
gi|289573926|ref|ZP_06454153.1|  transmembrane serine/threonine-p...   418    2e-114
gi|15840712|ref|NP_335749.1|  serine/threonine protein kinase [My...   418    2e-114
gi|289446857|ref|ZP_06436601.1|  transmembrane serine/threonine-p...   417    2e-114
gi|15608406|ref|NP_215782.1|  transmembrane serine/threonine-prot...   417    2e-114
gi|289757365|ref|ZP_06516743.1|  transmembrane serine/threonine-p...   417    5e-114
gi|307083827|ref|ZP_07492940.1|  putative protein kinase domain p...   415    1e-113
gi|289753342|ref|ZP_06512720.1|  predicted protein [Mycobacterium...   412    7e-113
gi|289554945|ref|ZP_06444155.1|  transmembrane serine/threonine-p...   412    9e-113
gi|183984127|ref|YP_001852418.1|  transmembrane serine/threonine-...   412    1e-112
gi|240172492|ref|ZP_04751151.1|  transmembrane serine/threonine-p...   408    2e-111
gi|342862145|ref|ZP_08718788.1|  serine/threonine protein kinase ...   406    7e-111
gi|296170175|ref|ZP_06851770.1|  non-specific serine/threonine pr...   405    1e-110
gi|120405645|ref|YP_955474.1|  protein kinase [Mycobacterium vanb...   400    3e-109
gi|183984142|ref|YP_001852433.1|  transmembrane serine/threonine-...   400    5e-109
gi|240173452|ref|ZP_04752110.1|  transmembrane serine/threonine-p...   398    2e-108
gi|145222614|ref|YP_001133292.1|  protein kinase [Mycobacterium g...   395    1e-107
gi|118465657|ref|YP_880659.1|  serine/threonine protein kinase [M...   394    4e-107


>gi|15608071|ref|NP_215446.1| transmembrane serine/threonine-protein kinase D PKND (protein 
kinase D) (STPK D) [Mycobacterium tuberculosis H37Rv]
 gi|15840354|ref|NP_335391.1| serine/threonine protein kinase [Mycobacterium tuberculosis CDC1551]
 gi|148660710|ref|YP_001282233.1| serine/threonine protein kinase [Mycobacterium tuberculosis H37Ra]
 62 more sequence titles
 Length=664

 Score = 1335 bits (3454),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 663/664 (99%), Positives = 664/664 (100%), Gaps = 0/664 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420
            ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT
Sbjct  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420

Query  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480
            GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG
Sbjct  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480

Query  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540
            TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS
Sbjct  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540

Query  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600
            KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA
Sbjct  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600

Query  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660
            VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV
Sbjct  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660

Query  661  KLTS  664
            KLTS
Sbjct  661  KLTS  664


>gi|339630994|ref|YP_004722636.1| Ser/Thr protein kinase D [Mycobacterium africanum GM041182]
 gi|339330350|emb|CCC26012.1| transmembrane serine/threonine-protein kinase D PKND (protein 
kinase D) [Mycobacterium africanum GM041182]
Length=664

 Score = 1332 bits (3448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 662/664 (99%), Positives = 663/664 (99%), Gaps = 0/664 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLM PAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMHPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420
            ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT
Sbjct  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420

Query  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480
            GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG
Sbjct  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480

Query  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540
            TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS
Sbjct  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540

Query  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600
            KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA
Sbjct  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600

Query  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660
            VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV
Sbjct  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660

Query  661  KLTS  664
            KLTS
Sbjct  661  KLTS  664


>gi|289446501|ref|ZP_06436245.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis CPHL_A]
 gi|289419459|gb|EFD16660.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis CPHL_A]
Length=664

 Score = 1332 bits (3448),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 662/664 (99%), Positives = 664/664 (100%), Gaps = 0/664 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420
            ALQASLG+AVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT
Sbjct  361  ALQASLGYAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420

Query  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480
            GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG
Sbjct  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480

Query  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540
            TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS
Sbjct  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540

Query  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600
            KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA
Sbjct  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600

Query  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660
            VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV
Sbjct  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660

Query  661  KLTS  664
            KLTS
Sbjct  661  KLTS  664


>gi|289442346|ref|ZP_06432090.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis T46]
 gi|289415265|gb|EFD12505.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis T46]
Length=664

 Score = 1332 bits (3447),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 662/664 (99%), Positives = 663/664 (99%), Gaps = 0/664 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420
            ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT
Sbjct  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420

Query  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480
            GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQP GLAVDGAG
Sbjct  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPPGLAVDGAG  480

Query  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540
            TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS
Sbjct  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540

Query  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600
            KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA
Sbjct  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600

Query  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660
            VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV
Sbjct  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVV  660

Query  661  KLTS  664
            KLTS
Sbjct  661  KLTS  664


>gi|306775061|ref|ZP_07413398.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis SUMu001]
 gi|308216410|gb|EFO75809.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis SUMu001]
Length=659

 Score = 1266 bits (3277),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 637/638 (99%), Positives = 638/638 (100%), Gaps = 0/638 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420
            ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT
Sbjct  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFT  420

Query  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480
            GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG
Sbjct  421  GIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAG  480

Query  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540
            TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS
Sbjct  481  TVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS  540

Query  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600
            KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA
Sbjct  541  KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIA  600

Query  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP  638
            VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP
Sbjct  601  VDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTP  638


 Score =  128 bits (321),  Expect = 3e-27, Method: Compositional matrix adjust.
 Identities = 75/124 (61%), Positives = 86/124 (70%), Gaps = 5/124 (4%)

Query  543  QTVLPFTGLN---DPDGVAVDNSGNVYVTDTDN-NRVVKLEAESNNQVVLPFTDITAPWG  598
            QTVLPFTG++    P GVAVD++GNVYVT      RVVKL   S    VLPF  +  P G
Sbjct  414  QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQG  473

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            +AVD AGTVYVT+ N N+VV L AGS   TVLPF GLN P  +AVD+   VYVADRGN+R
Sbjct  474  LAVDGAGTVYVTDFN-NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR  532

Query  659  VVKL  662
            VVKL
Sbjct  533  VVKL  536


>gi|254549912|ref|ZP_05140359.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis '98-R604 INH-RIF-EM']
Length=624

 Score = 1246 bits (3224),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 620/621 (99%), Positives = 621/621 (100%), Gaps = 0/621 (0%)

Query  44   KLISPQYSDNAVFRARMQREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRAL  103
            +LISPQYSDNAVFRARMQREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRAL
Sbjct  4    ELISPQYSDNAVFRARMQREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRAL  63

Query  104  LKQYGPLTPARAVAIVRQIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAA  163
            LKQYGPLTPARAVAIVRQIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAA
Sbjct  64   LKQYGPLTPARAVAIVRQIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAA  123

Query  164  SDPGLTQTGTAVGTYNYMAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLI  223
            SDPGLTQTGTAVGTYNYMAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLI
Sbjct  124  SDPGLTQTGTAVGTYNYMAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLI  183

Query  224  AAHLMDPAPQPSQLRPGRVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQ  283
            AAHLMDPAPQPSQLRPGRVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQ
Sbjct  184  AAHLMDPAPQPSQLRPGRVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQ  243

Query  284  ATTILRRGDNATLLATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADS  343
            ATTILRRGDNATLLATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADS
Sbjct  244  ATTILRRGDNATLLATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADS  303

Query  344  RGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLR  403
            RGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLR
Sbjct  304  RGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLR  363

Query  404  PSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL  463
            PSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL
Sbjct  364  PSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVL  423

Query  464  PFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAV  523
            PFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAV
Sbjct  424  PFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAV  483

Query  524  YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN  583
            YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN
Sbjct  484  YVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN  543

Query  584  NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV  643
            NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV
Sbjct  544  NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAV  603

Query  644  DSDRTVYVADRGNDRVVKLTS  664
            DSDRTVYVADRGNDRVVKLTS
Sbjct  604  DSDRTVYVADRGNDRVVKLTS  624


>gi|183984546|ref|YP_001852837.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
marinum M]
 gi|183177872|gb|ACC42982.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
marinum M]
Length=698

 Score =  900 bits (2327),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 471/690 (69%), Positives = 538/690 (78%), Gaps = 38/690 (5%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS+FGPY+L+RL+GRGGMGEVYEAEDTRK RVVALKLIS QYS N  FRARMQREADT
Sbjct  9    RVGSRFGPYELVRLIGRGGMGEVYEAEDTRKRRVVALKLISTQYSGNPTFRARMQREADT  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPHIVPIHDYGEI+ QFFVEMR+IDG SLRA+L Q+GPLTPARAVAIVRQIAAAL
Sbjct  69   AGRLTEPHIVPIHDYGEIDDQFFVEMRLIDGVSLRAMLTQFGPLTPARAVAIVRQIAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAH+NGVTHRDVKPENILV  +DFAYLVDFGIARAA+DPGLTQ G AVGTYNYMAPERF
Sbjct  129  DAAHSNGVTHRDVKPENILVADNDFAYLVDFGIARAAADPGLTQGGMAVGTYNYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            TG++VTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLM+P P+PSQLRPGRVP AL
Sbjct  189  TGNDVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMEPPPRPSQLRPGRVPAAL  248

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D+VIAKGMAKNP ER+MSAGDLAIAAH+ALTT EQ Q  TILR+GDN  L+    D G  
Sbjct  249  DEVIAKGMAKNPDERYMSAGDLAIAAHEALTTPEQRQEATILRQGDNMALMTPAVDPGAG  308

Query  307  QSESGIAGAG----------------TGP-----PTPGA-----ARWSPGDSATVAGPLA  340
             S +  +G+G                TG      P P +     +R    D  T A P+ 
Sbjct  309  GSWTNYSGSGAQPPAPQPVAPPPQYPTGDETVARPVPASTTGWRSRPDVSDQRTQAAPVI  368

Query  341  ADSRGGNWPSQTGHSPAV-----PNAL-QASLGHAVPPAGNK--RKVWAVVGAAAIVLVA  392
                G +WPSQ+G  PAV     P+A   AS     PPA  K  RK W +  A   VL+ 
Sbjct  369  T---GTSWPSQSGIRPAVGTGSSPSATPPASQPATAPPASPKKSRKNWIIGAAVVAVLLV  425

Query  393  IVAAAGYLVLRPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVK  452
            +  A  +++ +P  S T+  GQ VLPFTG++FR +P GVAVD+ G VYVT++ MYGRVV 
Sbjct  426  VAGATAFVLAKPKGS-TEPRGQVVLPFTGLNFRFAPGGVAVDANGTVYVTNQTMYGRVVA  484

Query  453  LATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYP  512
            L  GS+  TV PFNGLY+PQG+AVD +G +YVTDFNNRVV LAAGSNNQ  LPF+GLNYP
Sbjct  485  LPAGSSTPTVKPFNGLYEPQGVAVDTSGKIYVTDFNNRVVALAAGSNNQVELPFNGLNYP  544

Query  513  EGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDN  572
            EG+AVD QG VYVADRGNNRVVK+ AGS +Q VLPF GL +PDGVAVD+ GNVYVTDTDN
Sbjct  545  EGIAVDAQGNVYVADRGNNRVVKMPAGSTSQVVLPFNGLKNPDGVAVDSDGNVYVTDTDN  604

Query  573  NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF  632
            NRV++L+A ++NQ VLPF+++TAPWGI VD AG VYVTEH+ N V KL AG+TTST LPF
Sbjct  605  NRVLQLDAGTSNQSVLPFSNLTAPWGITVDSAGNVYVTEHDNNAVAKLAAGATTSTELPF  664

Query  633  TGLNTPLAVAVDSDRTVYVADRGNDRVVKL  662
            TGLNTPL+VAVD    VYVADRGN RV+KL
Sbjct  665  TGLNTPLSVAVDKKGNVYVADRGNGRVLKL  694


>gi|240171930|ref|ZP_04750589.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
kansasii ATCC 12478]
Length=722

 Score =  898 bits (2320),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 475/711 (67%), Positives = 528/711 (75%), Gaps = 56/711 (7%)

Query  1    VSDAVP--QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRA  58
            VS+  P  +VGS+FGPY L+RL+GRGGMGEVYEAEDTRKHR+VALKLIS QYS+N VFRA
Sbjct  15   VSETEPGSRVGSRFGPYHLVRLIGRGGMGEVYEAEDTRKHRIVALKLISTQYSENPVFRA  74

Query  59   RMQREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAI  118
            RMQREADTAGRLTEPHIVPIHDYGEI+GQF+VEMR+IDG SLR LL QYGPL PARAVAI
Sbjct  75   RMQREADTAGRLTEPHIVPIHDYGEIDGQFYVEMRLIDGVSLRTLLTQYGPLAPARAVAI  134

Query  119  VRQIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTY  178
            VRQ+AAALDAAH  GVTHRDVKPENILV A+DFAYLVDFGIARAA DPGLTQ+G AVGTY
Sbjct  135  VRQVAAALDAAHTTGVTHRDVKPENILVAANDFAYLVDFGIARAAHDPGLTQSGMAVGTY  194

Query  179  NYMAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLR  238
            NYMAPERFT D++TYRADIYALACVLGECLTGAPPYR DSVERLIAAHLM+P P+PS LR
Sbjct  195  NYMAPERFTADDITYRADIYALACVLGECLTGAPPYRTDSVERLIAAHLMEPPPRPSVLR  254

Query  239  PGRVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLA  298
            PGRVPPALD+VIAKGMAKNP ER+MSAGDLAIAAHDALT  EQ Q  TIL RGDNATL+ 
Sbjct  255  PGRVPPALDEVIAKGMAKNPQERYMSAGDLAIAAHDALTMPEQRQEATILERGDNATLI-  313

Query  299  TPADTGLSQSESGIAGAGTGP-----------------------------PTP-GAARW-  327
              A+ G   + +   GAG  P                             P P G   W 
Sbjct  314  --ANAGFGGAWTNYTGAGPQPQPQPQPQPQPPPPIAPRPQYPTENETAVRPVPSGLQGWR  371

Query  328  ---SPGDSATVAGPLAADSRGGNWPSQTGHSPAVPNALQASLGHAVPPA-----------  373
                  D  T A P+     G  WPSQ G SP     +    G    P+           
Sbjct  372  SKPHSSDQQTQAAPIVT---GTGWPSQPGLSPVGQGPVGQGAGSGGSPSFGPPSQSQPTR  428

Query  374  --GNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLPFTGIDFRLSPSGV  431
               NKRK W V    A V++ +   + ++  RP  S T   GQ VLPF G++FR SP GV
Sbjct  429  QPRNKRKTWTVAAVVAAVILVVAGISAFVATRPKGS-TPPQGQVVLPFNGLNFRFSPGGV  487

Query  432  AVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRV  491
            AVD  G VYVT++ MYGRVV L   S+  TV PFNGLY+PQGLAVDG+GT+YV+DFNNRV
Sbjct  488  AVDDQGTVYVTNQTMYGRVVTLPADSSTPTVKPFNGLYEPQGLAVDGSGTIYVSDFNNRV  547

Query  492  VTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGL  551
            V+LAAGSN Q  LPF GLNYPEG+AVD QG+VYVADRGNNRVVKLAAGS +QTVLPF GL
Sbjct  548  VSLAAGSNRQVELPFSGLNYPEGIAVDAQGSVYVADRGNNRVVKLAAGSTSQTVLPFNGL  607

Query  552  NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTE  611
             +PDGVAVD  GNVYVTDTDNNRVVKLEA ++NQ VLPFT +TAPWGI VD AG VYVTE
Sbjct  608  KNPDGVAVDADGNVYVTDTDNNRVVKLEAGTSNQSVLPFTGLTAPWGITVDGAGNVYVTE  667

Query  612  HNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL  662
            H+ N V KL AG+T ST LPFTGLNTPL+VAVD    VYVADRGN RV+KL
Sbjct  668  HDNNAVAKLPAGATASTELPFTGLNTPLSVAVDKKGNVYVADRGNGRVLKL  718


>gi|254819498|ref|ZP_05224499.1| PknD [Mycobacterium intracellulare ATCC 13950]
Length=661

 Score =  867 bits (2239),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 452/677 (67%), Positives = 525/677 (78%), Gaps = 31/677 (4%)

Query  1    VSDAVP--QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRA  58
            +SD+ P  + GS FGPY+L+RLL +GGMGEVYEAEDTRKHR+VALKLIS Q+S N+ FRA
Sbjct  1    MSDSGPASRAGSWFGPYRLVRLLRQGGMGEVYEAEDTRKHRMVALKLISQQFSGNSEFRA  60

Query  59   RMQREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAI  118
            R+QREAD AGRLTEPH+VPIHDYGEI+G+F+V+MR++DG  L  LL++ GPL   RA+AI
Sbjct  61   RLQREADIAGRLTEPHVVPIHDYGEIDGRFYVDMRLVDGVDLGTLLRRDGPLAAPRAIAI  120

Query  119  VRQIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTY  178
            + Q+AAALDAAHA GVTHRDV P NIL+T SDFAYL DFGIARAA+DPGLTQ GTA+GTY
Sbjct  121  ISQVAAALDAAHAIGVTHRDVTPGNILITGSDFAYLADFGIARAATDPGLTQFGTAIGTY  180

Query  179  NYMAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLR  238
             YMAPERFT D VT+ ADIY+LACVL ECLTG+PPYRAD++ERL+AAHL    P PSQLR
Sbjct  181  YYMAPERFTDDTVTHSADIYSLACVLSECLTGSPPYRADTIERLVAAHLTKAPPSPSQLR  240

Query  239  PGRVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLA  298
            PG  PPALDQVIAKGMAK P ER+ +AG+ A AAHDALTTSEQ +ATTILR G++A   A
Sbjct  241  PGAFPPALDQVIAKGMAKRPEERYRTAGEFAAAAHDALTTSEQRKATTILREGEDAVQRA  300

Query  299  TPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAV  358
                            A    P      W   +  T+AGP+A    G  W  ++GH P++
Sbjct  301  E---------------ASAQRPEREPQSWPAAE--TMAGPVAPRPGGTGWSERSGHHPSL  343

Query  359  PNALQASLGHA----------VPPAGNKRKVWAVVGAAAIV-LVA-IVAAAGYLVLRPSW  406
                  + GH             P  +KRK W +VGA A+V LVA IVA AGYL  R S 
Sbjct  344  IRPAPTTFGHTYGSGPDFRSPAVPIDSKRKQWIIVGAIALVALVAFIVAVAGYLSTRSSG  403

Query  407  SPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFN  466
               +ASGQ+VLPF GIDFRLSP GVA+DSAG+VYVTSEGMYGRVVKL  GS  TTVLPF+
Sbjct  404  PAQEASGQSVLPFNGIDFRLSPGGVALDSAGDVYVTSEGMYGRVVKLTAGSNATTVLPFH  463

Query  467  GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVA  526
            GLYQPQGLAVDGAGTVYV DFNNRVV+LAAGSN+Q VLPF GL+YPEG+AVD+QGAVYVA
Sbjct  464  GLYQPQGLAVDGAGTVYVADFNNRVVSLAAGSNDQKVLPFSGLSYPEGVAVDSQGAVYVA  523

Query  527  DRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV  586
            DRGN+RVVKLAAGSKTQT LPF GL +PDGVAVD +G VYV DTDNNR+VKL+A SN Q 
Sbjct  524  DRGNSRVVKLAAGSKTQTELPFNGLKNPDGVAVDAAGTVYVADTDNNRIVKLDANSNTQA  583

Query  587  VLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD  646
             LPF +++ PWGIAVD +GTVYVTEH+ + V+K  AGS T TVLPF GLNTPLAVAVD +
Sbjct  584  ELPFQNVSVPWGIAVDNSGTVYVTEHDKSDVLKFPAGSNTPTVLPFDGLNTPLAVAVDKE  643

Query  647  RTVYVADRGNDRVVKLT  663
            R+VY+ADRGNDRVVKLT
Sbjct  644  RSVYIADRGNDRVVKLT  660


>gi|254776673|ref|ZP_05218189.1| serine/threonine-protein kinase PknD [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=656

 Score =  845 bits (2183),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 457/664 (69%), Positives = 513/664 (78%), Gaps = 26/664 (3%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            QVGS FGPY+L+RLL +GGMGEVYEAEDTRKHR+VALKLIS Q+S N  F AR+QREAD 
Sbjct  9    QVGSWFGPYRLVRLLRQGGMGEVYEAEDTRKHRLVALKLISQQFSGNPEFSARLQREADI  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPH+VPIHDYGEI+G+FFVEMR++DG  L +LL + GPL P RA+AI+RQ+AAAL
Sbjct  69   AGRLTEPHVVPIHDYGEIDGRFFVEMRLVDGIDLGSLLHREGPLAPPRAIAIIRQVAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GVTHRDV P NILVT SDFAYL DFGIARAASDPGLTQ GTA+GTY YMAPERF
Sbjct  129  DAAHAAGVTHRDVTPGNILVTPSDFAYLADFGIARAASDPGLTQVGTAIGTYYYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            T DEVT   DIY+LACVL ECLTG PPYRAD+VERL+AAHL   AP  SQLRPG  PPAL
Sbjct  189  TDDEVTNSVDIYSLACVLTECLTGVPPYRADTVERLVAAHLTKTAPPLSQLRPGGFPPAL  248

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D+VIAKGMAK P +R+ +AG+ A AAH+ALTTSEQ +A TILR G  A L A  A+   +
Sbjct  249  DRVIAKGMAKRPEDRYRTAGEFAAAAHEALTTSEQRKAATILRDGQIAALGAGAAEQRST  308

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN------  360
                  A      P+P A         TV GP  A  R G  PS +G   A P       
Sbjct  309  HWPESFA------PSPSA--------ETVVGPSPA--RAGA-PS-SGLIRAAPTGSGRVY  350

Query  361  ALQASLGHAVPPAGNKRKVWAVVGAAAIV-LVA-IVAAAGYLVLRPSWSPTQASGQTVLP  418
            A     G  V P  NKRK W +VGA A+V LVA +VA  GYL    S    QA GQ+VLP
Sbjct  351  APGPDFGRPVAPTDNKRKQWIIVGAVALVALVAFVVAFVGYLSTASSGPAKQAGGQSVLP  410

Query  419  FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG  478
            F GIDFRLSP GV +D AGNVYVTSEGMYGRVVKLA GS  TTVLPFNGLYQPQGLAVDG
Sbjct  411  FNGIDFRLSPGGVTLDGAGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQGLAVDG  470

Query  479  AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA  538
            AGTVYV DFNNRV+++AAGSN+Q  LPF GLNYPEG+AVD+QG VYVADRGN+RV+KLAA
Sbjct  471  AGTVYVADFNNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSRVLKLAA  530

Query  539  GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG  598
            GS+ QTVLPFTGLN+PDGVAVD +GNVYV DTDNNRVVKL+A SN Q  LPF D++ PWG
Sbjct  531  GSQNQTVLPFTGLNNPDGVAVDPAGNVYVADTDNNRVVKLDAASNTQSELPFHDLSVPWG  590

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            IAVD  GTVYVTEH+ N VVK   G+T+ TVLPFT LNTPLAVAVD D++VYVADRG+DR
Sbjct  591  IAVDNGGTVYVTEHDKNDVVKYPPGATSGTVLPFTALNTPLAVAVDRDQSVYVADRGDDR  650

Query  659  VVKL  662
            VVKL
Sbjct  651  VVKL  654


 Score =  117 bits (293),  Expect = 6e-24, Method: Compositional matrix adjust.
 Identities = 68/126 (54%), Positives = 83/126 (66%), Gaps = 5/126 (3%)

Query  543  QTVLPFTGLN---DPDGVAVDNSGNVYVTDTD-NNRVVKLEAESNNQVVLPFTDITAPWG  598
            Q+VLPF G++    P GV +D +GNVYVT      RVVKL A S    VLPF  +  P G
Sbjct  406  QSVLPFNGIDFRLSPGGVTLDGAGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQG  465

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            +AVD AGTVYV + N N+V+ + AGS +   LPF+GLN P  VAVDS   VYVADRGN R
Sbjct  466  LAVDGAGTVYVADFN-NRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSR  524

Query  659  VVKLTS  664
            V+KL +
Sbjct  525  VLKLAA  530


 Score =  113 bits (283),  Expect = 1e-22, Method: Compositional matrix adjust.
 Identities = 69/125 (56%), Positives = 85/125 (68%), Gaps = 5/125 (4%)

Query  414  QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQG  473
            QTVLPFTG++   +P GVAVD AGNVYV ++    RVVKL   S   + LPF+ L  P G
Sbjct  535  QTVLPFTGLN---NPDGVAVDPAGNVYV-ADTDNNRVVKLDAASNTQSELPFHDLSVPWG  590

Query  474  LAVDGAGTVYVTDFN-NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR  532
            +AVD  GTVYVT+ + N VV    G+ + TVLPF  LN P  +AVD   +VYVADRG++R
Sbjct  591  IAVDNGGTVYVTEHDKNDVVKYPPGATSGTVLPFTALNTPLAVAVDRDQSVYVADRGDDR  650

Query  533  VVKLA  537
            VVKLA
Sbjct  651  VVKLA  655


>gi|342861478|ref|ZP_08718125.1| PknD [Mycobacterium colombiense CECT 3035]
 gi|342130967|gb|EGT84256.1| PknD [Mycobacterium colombiense CECT 3035]
Length=661

 Score =  827 bits (2135),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 439/673 (66%), Positives = 513/673 (77%), Gaps = 35/673 (5%)

Query  6    PQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREAD  65
            P+VGS FGPY+L+RLL +GGMGEVYEAED+RK R+VALKLISP++S NA FRAR+QREAD
Sbjct  8    PRVGSWFGPYRLVRLLRQGGMGEVYEAEDSRKRRMVALKLISPEFSANAEFRARLQREAD  67

Query  66   TAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAA  125
             AGRLTEPH+VPIHDYGEI+G+F+V+MR++DG  L  LL++ GPL P RA+AI+ Q+AAA
Sbjct  68   IAGRLTEPHVVPIHDYGEIDGRFYVDMRLVDGVDLATLLRRDGPLAPPRAIAIISQVAAA  127

Query  126  LDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPER  185
            LDAAHA GVTHRDV P NILVT SDFAYL DFGIAR ASDPGLTQ GTA+GTY YMAPER
Sbjct  128  LDAAHAAGVTHRDVTPGNILVTPSDFAYLADFGIARGASDPGLTQVGTAIGTYYYMAPER  187

Query  186  FTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPA  245
            FT DEVT+  DIY+LACVL ECLTG+PPYRA+++ERLIAAHL   A  PSQLRPG  PPA
Sbjct  188  FTEDEVTHSVDIYSLACVLTECLTGSPPYRAETIERLIAAHLTKTAAPPSQLRPGAFPPA  247

Query  246  LDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGL  305
            LDQVIAKGMAKNPAER+ +AG+ A AAH ALTTSEQ +A TILR G++A +         
Sbjct  248  LDQVIAKGMAKNPAERYRTAGEFAAAAHQALTTSEQRKAATILREGESAAV---------  298

Query  306  SQSESGIAGAGTGPPTPGAARWSPGDS---ATVAGPLAADSRGGNWPSQTGHSPAVPNAL  362
                      G+G   P   R SP  S    T+AGPL A +   N   ++G  P++  A 
Sbjct  299  ----------GSGAIDPRLTRDSPALSPSAETMAGPLPAAANSANRSDRSGPGPSLIRAA  348

Query  363  QAS----------LGHAVPPAGNKRKVWAVVGA-AAIVLVAIVAAA-GYLVLRPSWSPTQ  410
              +           G    PA NKR+ W +VGA AA+ LVA V A  GY+    S S  +
Sbjct  349  PTTSGRVYGPGPDFGRPAVPADNKRRQWILVGAIAAVALVAFVMAVIGYMSTGSSPS-KE  407

Query  411  ASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQ  470
            ASGQ+VLPF GIDFRLSP GVA++ AG+V+VT++GMYGRVV+L  G++  TVLPF GLYQ
Sbjct  408  ASGQSVLPFNGIDFRLSPGGVALNKAGDVFVTNQGMYGRVVELPAGASTPTVLPFTGLYQ  467

Query  471  PQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGN  530
            PQGLAVD AG VYV DFNNRVV LAAGSNNQ VLPF GL+YPEG+AVD QG VYVADRGN
Sbjct  468  PQGLAVDSAGAVYVADFNNRVVKLAAGSNNQAVLPFTGLSYPEGVAVDPQGGVYVADRGN  527

Query  531  NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF  590
            +RVVKLA GS  QTVLPF  L +PDGVAVD +GNVYV DTDNNRV++L A +  Q VLPF
Sbjct  528  SRVVKLAPGSSAQTVLPFADLKNPDGVAVDTAGNVYVADTDNNRVLELPAGATAQTVLPF  587

Query  591  TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVY  650
            T I+ PWGIAVD +G+VYVTEH+T++V+KL AGS T T L F GLNTPLAV VD D+ VY
Sbjct  588  TGISVPWGIAVDSSGSVYVTEHDTSRVLKLPAGSNTPTELKFDGLNTPLAVTVDKDQNVY  647

Query  651  VADRGNDRVVKLT  663
            VADRGNDRVVKLT
Sbjct  648  VADRGNDRVVKLT  660


>gi|118465473|ref|YP_883379.1| serine/threonine protein kinase [Mycobacterium avium 104]
 gi|118166760|gb|ABK67657.1| serine/threonine-protein kinase PknD [Mycobacterium avium 104]
Length=656

 Score =  825 bits (2130),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 450/664 (68%), Positives = 507/664 (77%), Gaps = 26/664 (3%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            QVGS FGPY+L+RLL +GGMGEVYEAEDTRKHR+VALKLIS Q+S N  F AR+QREAD 
Sbjct  9    QVGSWFGPYRLVRLLRQGGMGEVYEAEDTRKHRLVALKLISQQFSGNPEFSARLQREADI  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPH+VPIHDYGEI+G+FFVEMR++DG  L +LL + GPL P RA+AI+RQ+AAAL
Sbjct  69   AGRLTEPHVVPIHDYGEIDGRFFVEMRLVDGIDLGSLLHREGPLAPPRAIAIIRQVAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GVTHRDV P NILVT SDFAYL DFGIARAASDPGLTQ GTA+GTY YMAPERF
Sbjct  129  DAAHAAGVTHRDVTPGNILVTPSDFAYLADFGIARAASDPGLTQVGTAIGTYYYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            T DEVT   DIY+LACVL ECLTG PPYRAD+VERL+AAHL   AP  SQLRPG  PPAL
Sbjct  189  TDDEVTNSVDIYSLACVLTECLTGVPPYRADTVERLVAAHLTKTAPPLSQLRPGGFPPAL  248

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D+VIAKGMAK P +R+ +AG+ A AAH+ALTTSEQ +A TILR G  A L A  A+   +
Sbjct  249  DRVIAKGMAKRPEDRYRTAGEFAAAAHEALTTSEQRKAATILRDGQIAALGAGAAEQRST  308

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN------  360
                  A      P+P A         TV GP  A  R G  PS +G   A P       
Sbjct  309  HWPDSFA------PSPSA--------ETVVGPSPA--RAGA-PS-SGLIRAAPTGSGRVY  350

Query  361  ALQASLGHAVPPAGNKRKVWAV--VGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLP  418
            A     G  V P  NKRK W +    A   ++  +VA  GYL    S    QA GQ+VLP
Sbjct  351  APGPDFGRPVAPTDNKRKQWIIVGAVALVALVAFVVAVVGYLSTASSGPAKQAGGQSVLP  410

Query  419  FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG  478
            F GIDFRLSP GV +D AGNVYVTSEGMYGRVVKLA GS  TTVLPFNGLYQPQGLAVDG
Sbjct  411  FNGIDFRLSPGGVTLDGAGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQGLAVDG  470

Query  479  AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA  538
            AGTVYV DFNNRV+++AAGSN+Q  LPF GLNYPEG+AVD+QG VYVADRGN+RV+KLAA
Sbjct  471  AGTVYVADFNNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSRVLKLAA  530

Query  539  GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG  598
            GS+ QTVLPFTGLN+PDGVAVD +GNVYV DTDNNRVVKL+A SN Q  LPF D++ PWG
Sbjct  531  GSQNQTVLPFTGLNNPDGVAVDPAGNVYVADTDNNRVVKLDAASNTQSELPFHDLSVPWG  590

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            IAVD  GTVYVTEH+ N VVK   G+T+ TVLPFT LNTPLAVAVD D++VYVADRG+DR
Sbjct  591  IAVDNGGTVYVTEHDKNDVVKYPPGATSGTVLPFTALNTPLAVAVDRDQSVYVADRGDDR  650

Query  659  VVKL  662
            VVKL
Sbjct  651  VVKL  654


 Score =  117 bits (292),  Expect = 8e-24, Method: Compositional matrix adjust.
 Identities = 68/126 (54%), Positives = 83/126 (66%), Gaps = 5/126 (3%)

Query  543  QTVLPFTGLN---DPDGVAVDNSGNVYVTDTD-NNRVVKLEAESNNQVVLPFTDITAPWG  598
            Q+VLPF G++    P GV +D +GNVYVT      RVVKL A S    VLPF  +  P G
Sbjct  406  QSVLPFNGIDFRLSPGGVTLDGAGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQG  465

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            +AVD AGTVYV + N N+V+ + AGS +   LPF+GLN P  VAVDS   VYVADRGN R
Sbjct  466  LAVDGAGTVYVADFN-NRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSR  524

Query  659  VVKLTS  664
            V+KL +
Sbjct  525  VLKLAA  530


 Score =  113 bits (283),  Expect = 9e-23, Method: Compositional matrix adjust.
 Identities = 69/125 (56%), Positives = 85/125 (68%), Gaps = 5/125 (4%)

Query  414  QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQG  473
            QTVLPFTG++   +P GVAVD AGNVYV ++    RVVKL   S   + LPF+ L  P G
Sbjct  535  QTVLPFTGLN---NPDGVAVDPAGNVYV-ADTDNNRVVKLDAASNTQSELPFHDLSVPWG  590

Query  474  LAVDGAGTVYVTDFN-NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR  532
            +AVD  GTVYVT+ + N VV    G+ + TVLPF  LN P  +AVD   +VYVADRG++R
Sbjct  591  IAVDNGGTVYVTEHDKNDVVKYPPGATSGTVLPFTALNTPLAVAVDRDQSVYVADRGDDR  650

Query  533  VVKLA  537
            VVKLA
Sbjct  651  VVKLA  655


>gi|41409485|ref|NP_962321.1| PknD [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|41398316|gb|AAS05937.1| PknD [Mycobacterium avium subsp. paratuberculosis K-10]
Length=656

 Score =  821 bits (2121),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 447/664 (68%), Positives = 505/664 (77%), Gaps = 26/664 (3%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            QVGS FGPY+L+RLL +GGMGEVYEAEDTRKHR+VALKLIS Q+S N  F AR+QREAD 
Sbjct  9    QVGSWFGPYRLVRLLRQGGMGEVYEAEDTRKHRLVALKLISQQFSGNPEFSARLQREADI  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPH+VPIHDYGEI+G+FFVEMR++DG  L +LL + GPL P RA+AI+RQ+AAAL
Sbjct  69   AGRLTEPHVVPIHDYGEIDGRFFVEMRLVDGIDLGSLLHREGPLAPPRAIAIIRQVAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GVTHRDV P NILVT SDFAYL DFGIARAASDPGLTQ GTA+GTY YMAPERF
Sbjct  129  DAAHAAGVTHRDVTPGNILVTPSDFAYLADFGIARAASDPGLTQVGTAIGTYYYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            T DEVT   DIY+LACVL ECLTG PPYRAD+VERL+AAHL   AP  SQLRPG  PPAL
Sbjct  189  TDDEVTNSVDIYSLACVLTECLTGVPPYRADTVERLVAAHLTKTAPPLSQLRPGAFPPAL  248

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D+VIAKGMAK P +R+ +AG+ A AAH+ALTTSEQ +A TILR G  A L A  A+   +
Sbjct  249  DRVIAKGMAKRPEDRYRTAGEFAAAAHEALTTSEQRKAATILRDGQIAALGAGAAEQRST  308

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN------  360
                  A      P+P A         TV GP  A  R G  PS +G   A P       
Sbjct  309  HWPDSFA------PSPSA--------ETVVGPSPA--RAGA-PS-SGLIRAAPTGSGRVY  350

Query  361  ALQASLGHAVPPAGNKRKVWAV--VGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLP  418
            A     G    P  NKRK W +    A   ++  +VA  GYL    S    QA GQ+VLP
Sbjct  351  APGPDFGRPAAPTDNKRKQWIIVGAVALVALVAFVVAVVGYLSTASSGPAKQAGGQSVLP  410

Query  419  FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG  478
            F GIDFRLSP GV +D  GNVYVTSEGMYGRVVKLA GS  TTVLPFNGLYQPQGLAVDG
Sbjct  411  FNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQGLAVDG  470

Query  479  AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA  538
            AGTVYV DFNNRV+++AAGSN+Q  LPF GLNYPEG+AVD+QG VYVADRGN+RV+KLAA
Sbjct  471  AGTVYVADFNNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSRVLKLAA  530

Query  539  GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWG  598
            GS+ QTVLPFTGLN+PDGVAVD +GNVYV DTDNNRVVKL+A SN Q  LPF D++ PWG
Sbjct  531  GSQNQTVLPFTGLNNPDGVAVDPAGNVYVADTDNNRVVKLDAASNTQSELPFHDLSVPWG  590

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            IAVD  GTVYVTEH+ N V+K   G+T+ TVLPFT LNTPLAVAVD D++VYVADRG+DR
Sbjct  591  IAVDNGGTVYVTEHDKNDVMKYPPGATSGTVLPFTALNTPLAVAVDRDQSVYVADRGDDR  650

Query  659  VVKL  662
            VVKL
Sbjct  651  VVKL  654


 Score =  117 bits (293),  Expect = 7e-24, Method: Compositional matrix adjust.
 Identities = 68/126 (54%), Positives = 83/126 (66%), Gaps = 5/126 (3%)

Query  543  QTVLPFTGLN---DPDGVAVDNSGNVYVTDTD-NNRVVKLEAESNNQVVLPFTDITAPWG  598
            Q+VLPF G++    P GV +D +GNVYVT      RVVKL A S    VLPF  +  P G
Sbjct  406  QSVLPFNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQG  465

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            +AVD AGTVYV + N N+V+ + AGS +   LPF+GLN P  VAVDS   VYVADRGN R
Sbjct  466  LAVDGAGTVYVADFN-NRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSR  524

Query  659  VVKLTS  664
            V+KL +
Sbjct  525  VLKLAA  530


>gi|333992173|ref|YP_004524787.1| serine/threonine-protein kinase [Mycobacterium sp. JDM601]
 gi|333488141|gb|AEF37533.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
sp. JDM601]
Length=660

 Score =  768 bits (1982),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 414/661 (63%), Positives = 494/661 (75%), Gaps = 16/661 (2%)

Query  8    VGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADTA  67
            VG+QFGPY LLRLLGRGGMGEVYEAED RKHR VALKLISP  S + +FRARMQREAD A
Sbjct  10   VGTQFGPYLLLRLLGRGGMGEVYEAEDVRKHRSVALKLISPPLSGDPMFRARMQREADAA  69

Query  68   GRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAALD  127
            G+L EPH+VPIHDYGEI+GQ FV M+++DG  L A+L++ GP+ PARAVAI+ Q+AAALD
Sbjct  70   GQLREPHVVPIHDYGEIDGQMFVAMQLVDGDDLAAVLRRSGPMNPARAVAIIDQVAAALD  129

Query  128  AAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERFT  187
            AAH NGVTHRDVKPENIL+T  DFAYLVDFGIARAA+DPGLTQTGTAVGTY YMAPERF 
Sbjct  130  AAHGNGVTHRDVKPENILITRRDFAYLVDFGIARAATDPGLTQTGTAVGTYKYMAPERFG  189

Query  188  GDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPALD  247
             DEVTYR+DIY+LACVL ECLTG PP+R DSVERLI AHLM+P P+PSQLRPG VP ALD
Sbjct  190  ADEVTYRSDIYSLACVLNECLTGVPPFRVDSVERLITAHLMEPPPRPSQLRPGVVPIALD  249

Query  248  QVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLSQ  307
            QV+A+GMAKNP +R+ SAGDLA AAHDALT +EQH+A  I+RRG+        AD  +S 
Sbjct  250  QVVARGMAKNPWDRYSSAGDLANAAHDALTVAEQHRAAMIVRRGEE-------ADRPVSV  302

Query  308  SESGIAGAGTGPP-TPGAARWSPGDSATVAGPLAADS-RGGNWPSQTGHSPAVPNALQAS  365
            +   + G    P   PG    + G  AT+A P AA+S R    P Q     + P   + S
Sbjct  303  AGIAVGGTTERPNGHPGQPGQTGGFDATMARPAAAESWRERPAPPQR----STPERFE-S  357

Query  366  LGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPT--QASGQTVLPFTGID  423
               A  P G++RK       AA+VL     A GY + R S S T   A GQ+V+P  G+ 
Sbjct  358  RSFAAAPRGHRRKWLLPAAVAAVVLAIAGVAGGYALSRESGSTTGVSADGQSVVPLEGLS  417

Query  424  FRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVY  483
            FRLSP G+A+D   N+Y+T++ MYGRV+KL  GS+   VLPF GLY+PQG+AV   G+VY
Sbjct  418  FRLSPGGLALDGDDNLYITNQSMYGRVLKLVPGSSNPEVLPFTGLYEPQGVAVAADGSVY  477

Query  484  VTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ  543
            V+DFNNRVV LA  +  QT LPF GLNYPEG+ VD QG+VYVADRGNNRV+KL AG+  Q
Sbjct  478  VSDFNNRVVKLAPDTGEQTELPFAGLNYPEGVEVDAQGSVYVADRGNNRVLKLPAGAGAQ  537

Query  544  TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDE  603
             VLPFTGL+ PD VAVD++GNVYVTDTDN+RVV+L A SN Q  LPFT +++PWG++VD 
Sbjct  538  VVLPFTGLHHPDDVAVDSNGNVYVTDTDNDRVVRLSAGSNTQTDLPFTGLSSPWGVSVDR  597

Query  604  AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLT  663
            A  VYVT H  ++V+KL   +   T LPF+GLNTPL V VD+D  VYVADRGN+RVVKL 
Sbjct  598  ADNVYVTNHENHKVMKLDPVTNNQTKLPFSGLNTPLQVVVDADGAVYVADRGNNRVVKLA  657

Query  664  S  664
            +
Sbjct  658  A  658


>gi|31792118|ref|NP_854611.1| serine/threonine protein kinase D [Mycobacterium bovis AF2122/97]
 gi|121636854|ref|YP_977077.1| transmembrane serine/threonine-protein kinase D pknDb [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 gi|224989325|ref|YP_002644012.1| hypothetical protein JTY_0953 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|31617706|emb|CAD93815.1| TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE D PKNDb [SECOND 
PART](PROTEIN KINASE D) (STPK D) [Mycobacterium bovis AF2122/97]
 gi|121492501|emb|CAL70969.1| transmembrane serine/threonine-protein kinase D pknDb [second 
part] [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224772438|dbj|BAH25244.1| pknDb [Mycobacterium bovis BCG str. Tokyo 172]
 gi|341600870|emb|CCC63541.1| transmembrane serine/threonine-protein kinase D pknDb [second 
part] [Mycobacterium bovis BCG str. Moreau RDJ]
Length=369

 Score =  729 bits (1881),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 368/369 (99%), Positives = 369/369 (100%), Gaps = 0/369 (0%)

Query  296  LLATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHS  355
            +LATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHS
Sbjct  1    MLATPADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHS  60

Query  356  PAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQT  415
            PAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQT
Sbjct  61   PAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQT  120

Query  416  VLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLA  475
            VLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLA
Sbjct  121  VLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLA  180

Query  476  VDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVK  535
            VDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVK
Sbjct  181  VDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVK  240

Query  536  LAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITA  595
            LAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITA
Sbjct  241  LAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITA  300

Query  596  PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG  655
            PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG
Sbjct  301  PWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG  360

Query  656  NDRVVKLTS  664
            NDRVVKLTS
Sbjct  361  NDRVVKLTS  369


>gi|336459649|gb|EGO38584.1| NHL repeat protein,protein kinase family protein [Mycobacterium 
avium subsp. paratuberculosis S397]
Length=572

 Score =  682 bits (1760),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 379/580 (66%), Positives = 430/580 (75%), Gaps = 26/580 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            QVGS FGPY+L+RLL +GGMGEVYEAEDTRKHR+VALKLIS Q+S N  F AR+QREAD 
Sbjct  9    QVGSWFGPYRLVRLLRQGGMGEVYEAEDTRKHRLVALKLISQQFSGNPEFSARLQREADI  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPH+VPIHDYGEI+G+FFVEMR++DG  L +LL + GPL P RA+AI+RQ+AAAL
Sbjct  69   AGRLTEPHVVPIHDYGEIDGRFFVEMRLVDGIDLGSLLHREGPLAPPRAIAIIRQVAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GVTHRDV P NILVT SDFAYL DFGIARAASDPGLTQ GTA+GTY YMAPERF
Sbjct  129  DAAHAAGVTHRDVTPGNILVTPSDFAYLADFGIARAASDPGLTQVGTAIGTYYYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            T DEVT   DIY+LACVL ECLTG PPYRAD+VERL+AAHL   AP  SQLRPG  PPAL
Sbjct  189  TDDEVTNSVDIYSLACVLTECLTGVPPYRADTVERLVAAHLTKTAPPLSQLRPGAFPPAL  248

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D+VIAKGMAK P +R+ +AG+ A AAH+ALTTSEQ +A TILR G  A L A  A+   +
Sbjct  249  DRVIAKGMAKRPEDRYRTAGEFAAAAHEALTTSEQRKAATILRDGQIAALGAGAAEQRST  308

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN------  360
                  A      P+P A         TV GP  + +R G  PS +G   A P       
Sbjct  309  HWPDSFA------PSPSA--------ETVVGP--SPARAGA-PS-SGLIRAAPTGSGRVY  350

Query  361  ALQASLGHAVPPAGNKRKVWAV--VGAAAIVLVAIVAAAGYLVLRPSWSPTQASGQTVLP  418
            A     G    P  NKRK W +    A   ++  +VA  GYL    S    QA GQ+VLP
Sbjct  351  APGPDFGRPAAPTDNKRKQWIIVGAVALVALVAFVVAVVGYLSTASSGPAKQAGGQSVLP  410

Query  419  FTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG  478
            F GIDFRLSP GV +D  GNVYVTSEGMYGRVVKLA GS  TTVLPFNGLYQPQGLAVDG
Sbjct  411  FNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQGLAVDG  470

Query  479  AGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAA  538
            AGTVYV DFNNRV+++AAGSN+Q  LPF GLNYPEG+AVD+QG VYVADRGN+RV+KLAA
Sbjct  471  AGTVYVADFNNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSRVLKLAA  530

Query  539  GSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL  578
            GS+ QTVLPFT LN P  VAVD   +VYV D  ++RVVKL
Sbjct  531  GSQNQTVLPFTALNTPLAVAVDRDQSVYVADRGDDRVVKL  570


 Score =  177 bits (448),  Expect = 8e-42, Method: Compositional matrix adjust.
 Identities = 97/172 (57%), Positives = 120/172 (70%), Gaps = 5/172 (2%)

Query  495  AAGSNNQTVLPFDGLNY---PEGLAVDTQGAVYVADRG-NNRVVKLAAGSKTQTVLPFTG  550
            A  +  Q+VLPF+G+++   P G+ +D  G VYV   G   RVVKLAAGS   TVLPF G
Sbjct  400  AKQAGGQSVLPFNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNG  459

Query  551  LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVT  610
            L  P G+AVD +G VYV D  NNRV+ + A SN+Q  LPF+ +  P G+AVD  G VYV 
Sbjct  460  LYQPQGLAVDGAGTVYVADF-NNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVA  518

Query  611  EHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL  662
            +   ++V+KL AGS   TVLPFT LNTPLAVAVD D++VYVADRG+DRVVKL
Sbjct  519  DRGNSRVLKLAAGSQNQTVLPFTALNTPLAVAVDRDQSVYVADRGDDRVVKL  570


 Score =  170 bits (431),  Expect = 7e-40, Method: Compositional matrix adjust.
 Identities = 94/168 (56%), Positives = 115/168 (69%), Gaps = 6/168 (3%)

Query  459  GTTVLPFNGL---YQPQGLAVDGAGTVYVTD--FNNRVVTLAAGSNNQTVLPFDGLNYPE  513
            G +VLPFNG+     P G+ +DG G VYVT      RVV LAAGS   TVLPF+GL  P+
Sbjct  405  GQSVLPFNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQ  464

Query  514  GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNN  573
            GLAVD  G VYVAD  NNRV+ +AAGS +Q  LPF+GLN P+GVAVD+ G VYV D  N+
Sbjct  465  GLAVDGAGTVYVADF-NNRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNS  523

Query  574  RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLL  621
            RV+KL A S NQ VLPFT +  P  +AVD   +VYV +   ++VVKL+
Sbjct  524  RVLKLAAGSQNQTVLPFTALNTPLAVAVDRDQSVYVADRGDDRVVKLV  571


 Score =  118 bits (296),  Expect = 3e-24, Method: Compositional matrix adjust.
 Identities = 68/126 (54%), Positives = 83/126 (66%), Gaps = 5/126 (3%)

Query  543  QTVLPFTGLN---DPDGVAVDNSGNVYVTDTD-NNRVVKLEAESNNQVVLPFTDITAPWG  598
            Q+VLPF G++    P GV +D +GNVYVT      RVVKL A S    VLPF  +  P G
Sbjct  406  QSVLPFNGIDFRLSPGGVTLDGTGNVYVTSEGMYGRVVKLAAGSGATTVLPFNGLYQPQG  465

Query  599  IAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR  658
            +AVD AGTVYV + N N+V+ + AGS +   LPF+GLN P  VAVDS   VYVADRGN R
Sbjct  466  LAVDGAGTVYVADFN-NRVLSMAAGSNSQKELPFSGLNYPEGVAVDSQGGVYVADRGNSR  524

Query  659  VVKLTS  664
            V+KL +
Sbjct  525  VLKLAA  530


>gi|289568901|ref|ZP_06449128.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis T17]
 gi|289542655|gb|EFD46303.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
tuberculosis T17]
Length=357

 Score =  664 bits (1714),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 342/356 (97%), Positives = 343/356 (97%), Gaps = 2/356 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300

Query  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGG-NWPSQTGHS  355
            ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATV  P   D R     PSQT  S
Sbjct  301  ADTGLSQSESGIAGAGTGPPTPGAARWSPGDSATVT-PRPPDRRKPVANPSQTVRS  355


>gi|298524423|ref|ZP_07011832.1| transmembrane serine/threonine-protein kinase d pkndb [Mycobacterium 
tuberculosis 94_M4241A]
 gi|298494217|gb|EFI29511.1| transmembrane serine/threonine-protein kinase d pkndb [Mycobacterium 
tuberculosis 94_M4241A]
Length=330

 Score =  652 bits (1683),  Expect = 0.0, Method: Compositional matrix adjust.
 Identities = 329/330 (99%), Positives = 330/330 (100%), Gaps = 0/330 (0%)

Query  335  VAGPLAADSRGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIV  394
            +AGPLAADSRGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIV
Sbjct  1    MAGPLAADSRGGNWPSQTGHSPAVPNALQASLGHAVPPAGNKRKVWAVVGAAAIVLVAIV  60

Query  395  AAAGYLVLRPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA  454
            AAAGYLVLRPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA
Sbjct  61   AAAGYLVLRPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLA  120

Query  455  TGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEG  514
            TGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEG
Sbjct  121  TGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEG  180

Query  515  LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR  574
            LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR
Sbjct  181  LAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR  240

Query  575  VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG  634
            VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG
Sbjct  241  VVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG  300

Query  635  LNTPLAVAVDSDRTVYVADRGNDRVVKLTS  664
            LNTPLAVAVDSDRTVYVADRGNDRVVKLTS
Sbjct  301  LNTPLAVAVDSDRTVYVADRGNDRVVKLTS  330


>gi|333991664|ref|YP_004524278.1| serine/threonine-protein kinase [Mycobacterium sp. JDM601]
 gi|333487632|gb|AEF37024.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
sp. JDM601]
Length=664

 Score =  610 bits (1574),  Expect = 2e-172, Method: Compositional matrix adjust.
 Identities = 359/666 (54%), Positives = 452/666 (68%), Gaps = 24/666 (3%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            + GS+FGPYQL  LLG   +GEVY AEDTR   +VAL+LIS   S +  FR+R++ EA+ 
Sbjct  9    RAGSRFGPYQLGDLLGHDVVGEVYRAEDTRNDEMVALRLISESLSGDEAFRSRLEDEAEA  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AG+LTEPH+V I  YGEI+   ++E  +++GT L  +L   G L+P RAVA+VRQIAAAL
Sbjct  69   AGQLTEPHVVSIRAYGEIDDLLYLETDLVEGTDLATVLADGGALSPPRAVAVVRQIAAAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAH   V HRDVK  NILVT  D AYL+DFG+A A +DPG      A G   YMAPER 
Sbjct  129  DAAHNADVVHRDVKTANILVTDDDLAYLMDFGVAAAIADPG-KPADPATGPVAYMAPERL  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            TG++ T+ ADIYALA VL ECL+G P + AD+V+  +       AP+PS+LRPGRVP A+
Sbjct  188  TGEQATHLADIYALAAVLAECLSGVPAFTADTVDAALQERRTAAAPRPSKLRPGRVPAAI  247

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLA---TPADT  303
            D V+A+GMA+ P +R+ SAG+LA AA+ ALT  E+HQA+ ILRRG+ A  L     P   
Sbjct  248  DDVLARGMARKPEDRYSSAGELAAAAYQALTEPERHQASRILRRGEPALHLPGGLEPETR  307

Query  304  GLSQSESGIAGAG--TGPPTPGAARW-SPGDSATVAGPLAADSRGGNWPSQTGHSPAVPN  360
              ++ ++   G G     P P    W +PG+ +           GG +P     SP +  
Sbjct  308  PDARPDTATGGWGDTAAQPAPAGPGWPAPGEESGA-------RLGGPFPV----SPLLQT  356

Query  361  ALQASLGHAVPPAGNKRKVW---AVVGAAAIVLVAIVAAAGYLVLRPSW-SPTQASGQTV  416
             L A     +P A  +R++     +V  A +  VA+ AA G LV RPS  +P  A  Q V
Sbjct  357  DLAAET-LPMPTASRRRRLPRKPVLVAGAVLAAVAVAAAVGQLVSRPSSATPVAAPPQDV  415

Query  417  LPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAV  476
            LPFT +D+RLSP GVA+D+ GNVYV+SEGM+GRVVKLA GS  +TVLPF+  YQP+GL V
Sbjct  416  LPFTDLDYRLSPGGVALDAEGNVYVSSEGMHGRVVKLAAGSDSSTVLPFSDQYQPRGLVV  475

Query  477  DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKL  536
            D  G VY +D  +RVV LAA  ++ TVLPF GL+ P+G+AVD+ G VYVADRG++ V++L
Sbjct  476  DDIGNVYFSD-ASRVVKLAAADDSHTVLPFAGLDDPDGVAVDSDGNVYVADRGSDLVLRL  534

Query  537  AAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAP  596
             +G+ TQT LPF GLN PDGVAVD++GNVYVTDT NNRV+KL A SN QVVLPF  I +P
Sbjct  535  ESGTNTQTALPFVGLNKPDGVAVDSAGNVYVTDTGNNRVLKLVAVSNEQVVLPFVGIVSP  594

Query  597  WGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN  656
             GIAVD+ G VYVTEHN N+VVKL AG+    VLPFTGLN PL VAVD    VYVADRGN
Sbjct  595  RGIAVDDGGNVYVTEHNRNKVVKLAAGAAIPVVLPFTGLNAPLDVAVDKHGNVYVADRGN  654

Query  657  DRVVKL  662
            DRVVK+
Sbjct  655  DRVVKV  660


 Score =  171 bits (432),  Expect = 5e-40, Method: Compositional matrix adjust.
 Identities = 97/169 (58%), Positives = 114/169 (68%), Gaps = 5/169 (2%)

Query  414  QTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQG  473
             TVLPF G+D    P GVAVDS GNVYV   G    V++L +G+   T LPF GL +P G
Sbjct  499  HTVLPFAGLD---DPDGVAVDSDGNVYVADRGS-DLVLRLESGTNTQTALPFVGLNKPDG  554

Query  474  LAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNR  532
            +AVD AG VYVTD  NNRV+ L A SN Q VLPF G+  P G+AVD  G VYV +   N+
Sbjct  555  VAVDSAGNVYVTDTGNNRVLKLVAVSNEQVVLPFVGIVSPRGIAVDDGGNVYVTEHNRNK  614

Query  533  VVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE  581
            VVKLAAG+    VLPFTGLN P  VAVD  GNVYV D  N+RVVK++A+
Sbjct  615  VVKLAAGAAIPVVLPFTGLNAPLDVAVDKHGNVYVADRGNDRVVKVDAD  663


>gi|31792119|ref|NP_854612.1| serine/threonine protein kinase D [Mycobacterium bovis AF2122/97]
 gi|121636855|ref|YP_977078.1| transmembrane serine/threonine-protein kinase D pknDa [Mycobacterium 
bovis BCG str. Pasteur 1173P2]
 gi|224989326|ref|YP_002644013.1| transmembrane serine/threonine-protein kinase [Mycobacterium 
bovis BCG str. Tokyo 172]
 gi|6523376|emb|CAB62227.1| putative serine/threonine protein kinase [Mycobacterium bovis 
BCG]
 gi|31617707|emb|CAD93816.1| TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE D PKNDa [FIRST 
PART] (PROTEIN KINASE D) (STPK D) [Mycobacterium bovis AF2122/97]
 gi|121492502|emb|CAL70970.1| Transmembrane serine/threonine-protein kinase D pknDa [first 
part] [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224772439|dbj|BAH25245.1| transmembrane serine/threonine-protein kinase [Mycobacterium 
bovis BCG str. Tokyo 172]
 gi|341600871|emb|CCC63542.1| Transmembrane serine/threonine-protein kinase D pknDa [first 
part] [Mycobacterium bovis BCG str. Moreau RDJ]
Length=291

 Score =  566 bits (1459),  Expect = 4e-159, Method: Compositional matrix adjust.
 Identities = 275/276 (99%), Positives = 276/276 (100%), Gaps = 0/276 (0%)

Query  1    VSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60
            +SDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM
Sbjct  1    MSDAVPQVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARM  60

Query  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120
            QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR
Sbjct  61   QREADTAGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVR  120

Query  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180
            QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY
Sbjct  121  QIAAALDAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNY  180

Query  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240
            MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG
Sbjct  181  MAPERFTGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPG  240

Query  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDAL  276
            RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDAL
Sbjct  241  RVPPALDQVIAKGMAKNPAERFMSAGDLAIAAHDAL  276


>gi|48425401|pdb|1RWI|B Chain B, Extracellular Domain Of Mycobacterium Tuberculosis Pknd
 gi|48425402|pdb|1RWI|A Chain A, Extracellular Domain Of Mycobacterium Tuberculosis Pknd
 gi|48425403|pdb|1RWL|A Chain A, Extracellular Domain Of Mycobacterium Tuberculosis Pknd
Length=270

 Score =  520 bits (1340),  Expect = 3e-145, Method: Compositional matrix adjust.
 Identities = 262/262 (100%), Positives = 262/262 (100%), Gaps = 0/262 (0%)

Query  403  RPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV  462
            RPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV
Sbjct  1    RPSWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV  60

Query  463  LPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA  522
            LPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA
Sbjct  61   LPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGA  120

Query  523  VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  582
            VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES
Sbjct  121  VYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES  180

Query  583  NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA  642
            NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA
Sbjct  181  NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVA  240

Query  643  VDSDRTVYVADRGNDRVVKLTS  664
            VDSDRTVYVADRGNDRVVKLTS
Sbjct  241  VDSDRTVYVADRGNDRVVKLTS  262


>gi|240170121|ref|ZP_04748780.1| transmembrane serine/threonine-protein kinase D [Mycobacterium 
kansasii ATCC 12478]
Length=643

 Score =  518 bits (1335),  Expect = 1e-144, Method: Compositional matrix adjust.
 Identities = 312/675 (47%), Positives = 401/675 (60%), Gaps = 71/675 (10%)

Query  9    GSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADTAG  68
            G+ FG Y+L+ LLGRGGMGEV+ A DT   RVVA+K++  + SD+ VF+ R +REA  A 
Sbjct  16   GTSFGRYRLVELLGRGGMGEVWRAYDTVTDRVVAVKILPAEISDDQVFQQRFRREAHAAA  75

Query  69   RLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAALDA  128
            RL+ PH++PIH YGEING+ FV+MR+I+G  L+++L + GPL P RAV I+ Q+A AL A
Sbjct  76   RLSNPHLIPIHTYGEINGRLFVDMRLIEGRDLQSVLSR-GPLPPMRAVRIIEQVAKALHA  134

Query  129  AHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERFTG  188
            AH +G+ HRDVKP NIL+ A DFAYL+DFGIARAA + GLT  G  +GT +YMAPER + 
Sbjct  135  AHRDGLLHRDVKPSNILLDADDFAYLIDFGIARAAGELGLTTVGDVIGTCHYMAPERLSM  194

Query  189  DEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPALDQ  248
             +V  R+DIY+LACVL ECLT   P+  D +E  I +HL  P P+PS + PG +P  LD 
Sbjct  195  GQVDARSDIYSLACVLYECLTAQHPFPGD-IEEQITSHLETPPPRPSSINPG-LPVKLDM  252

Query  249  VIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLSQS  308
            VIAKGMAKNP +R+ +A +LA AAHDALTT                     PA     + 
Sbjct  253  VIAKGMAKNPRDRYETAVELARAAHDALTT---------------------PAPQPRVRP  291

Query  309  ESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGG------NWPSQTGHSPAVPNAL  362
            +  I       P PG A   P            D+RG       + P      P +P  L
Sbjct  292  KPPI-------PYPGDAHAHP------------DTRGQPQIAPRSPPQHVAAPPTMPRRL  332

Query  363  QASLG-------------HAVPPAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSPT  409
              +L                 P     R+   V+ AAA++ VA+  AA  +V   + SP 
Sbjct  333  AEALSVPAQQPAAAPPAKMTRPSRPWWRRKAVVITAAALLTVAVTVAA--MVTVSTLSPE  390

Query  410  QAS-GQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL  468
            +    Q VLPFTG+     P G++VDS G VYV  + ++ R++ L  GST   VLPF+GL
Sbjct  391  RTEFQQVVLPFTGLR---DPQGLSVDSGGTVYV-GDTLHNRILALFAGSTTPVVLPFDGL  446

Query  469  YQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVAD  527
              P G+  D +GTVYV D  N RVV L AGS  Q  LPF  L+ P GL+VD+   VYV D
Sbjct  447  SYPTGVTADNSGTVYVNDAGNRRVVVLPAGSKTQVTLPFTDLSNPTGLSVDSSRTVYVTD  506

Query  528  RGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV  587
               NRVV L AGS TQ  LPFTGL+DP G+ VD+SG V V D  NNRV+ L A +  QV 
Sbjct  507  TAKNRVVGLYAGSNTQFELPFTGLSDPTGLVVDSSGTVIVADGGNNRVLALPAGAQTQVT  566

Query  588  LPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDR  647
            LPFT +  P G+ VD  G VYVT     +++KL  GS+T   L FTGL+ P  +AVD+  
Sbjct  567  LPFTGLKQPGGVTVDSEGAVYVTNKGNGRILKLPPGSSTQVELHFTGLDNPWGLAVDNMG  626

Query  648  TVYVADRGNDRVVKL  662
            TVYV  R ND++V L
Sbjct  627  TVYVGGR-NDQIVAL  640


>gi|240170030|ref|ZP_04748689.1| transmembrane serine/threonine-protein kinase D [Mycobacterium 
kansasii ATCC 12478]
Length=621

 Score =  477 bits (1228),  Expect = 3e-132, Method: Compositional matrix adjust.
 Identities = 291/662 (44%), Positives = 391/662 (60%), Gaps = 55/662 (8%)

Query  12   FGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADTAGRLT  71
            FG YQL+ ++G G MG+VY A DT+  R VA+K+++P+ +    +R R +REA    +L 
Sbjct  5    FGRYQLIEVIGEGAMGKVYRARDTKMRREVAVKVLAPELATEPGYRERFRREAYGVAQLN  64

Query  72   EPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAALDAAHA  131
            EPH++PIH+  EI+GQ ++ M ++DGT ++ALL + G LTP   V IV Q+A ALDAAH 
Sbjct  65   EPHVIPIHEADEIDGQLYLVMPVVDGTDVQALLNRDGHLTPELTVTIVEQVAVALDAAHE  124

Query  132  NGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERFTGDEV  191
             G+ HRDVKP N+L+T  +F YL+DFGIAR  + P LT TG+ +GT+ YMAPERFT    
Sbjct  125  QGLVHRDVKPSNLLITDDEFVYLIDFGIARGEAAPKLTYTGSILGTWGYMAPERFTDGTN  184

Query  192  TYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPALDQVIA  251
                DIYALACVL ECLTG  P+  +++E+    H     P+P+ ++P  +P   D+VIA
Sbjct  185  DACVDIYALACVLYECLTGQLPFSGETLEQQFTGHTTQDPPRPTDVKP-ELPAGFDEVIA  243

Query  252  KGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLSQSESG  311
            +G+AK+P +R+ +A DLA AA   L               D+A+ L      G +++ + 
Sbjct  244  RGLAKDPDQRYPTARDLAAAARQVL---------------DDASELGP---CGAARTPNS  285

Query  312  IAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPAVPNALQASLGHAVP  371
             A A   P  PGA   +P  S T   P  + +               P   QA+      
Sbjct  286  DAAAPAEPQRPGA---TPDTSGTAEKPARSKT-------------VTPPPSQAT------  323

Query  372  PAGNKRKVWAVVGAAAIVLVAIVAAAGYLVLRPSWSP-TQASGQT--------VLPFTGI  422
            PA ++R+ W +   AA  LV  V   G +   P+  P +Q +G +        VLPFTG+
Sbjct  324  PAWHRRRPWQLG-GAAAALVIAVVGVGAIAGNPTAHPVSQVAGPSEPLRPAPVVLPFTGL  382

Query  423  DFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTV  482
            D    P+ VAV   G VYV  +    RVV+LA+GS   T LPF GL +PQ LAVD  GTV
Sbjct  383  D---GPTPVAVGPGGAVYV-GDYYNNRVVQLASGSFAETELPFTGLNRPQSLAVDSTGTV  438

Query  483  YVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT  542
            YV+     V+TL AG+ + + L   G     GLAVDT   VYV D  NNRV+KL  G   
Sbjct  439  YVSGARGEVLTLPAGAASASKLADTGAEDSAGLAVDTARNVYVVDTPNNRVLKLPGGGGP  498

Query  543  QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVD  602
            QTVLPFTGL  P GVAVD+SG VYV D  NNRV+KL A ++ Q+VLPFT++  P  +AVD
Sbjct  499  QTVLPFTGLKAPAGVAVDSSGAVYVCDAYNNRVLKLPAGASTQIVLPFTELVFPTAVAVD  558

Query  603  EAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL  662
            + G VYV++   NQ++KL AG+   TVLP  GLN P  VAVD    VYV D  N+RV+KL
Sbjct  559  KTGAVYVSDSPKNQILKLPAGADFQTVLPLGGLNHPEGVAVDEAGNVYVTDSNNNRVLKL  618

Query  663  TS  664
             +
Sbjct  619  AA  620


>gi|240171623|ref|ZP_04750282.1| transmembrane serine/threonine-protein kinase D PknD [Mycobacterium 
kansasii ATCC 12478]
Length=279

 Score =  439 bits (1130),  Expect = 7e-121, Method: Compositional matrix adjust.
 Identities = 212/275 (78%), Positives = 244/275 (89%), Gaps = 0/275 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            + G++FGPY+L RLLGRGGMGEVYEAEDTRK RVVALKLISP++S + VFRARMQREAD 
Sbjct  5    RAGARFGPYELRRLLGRGGMGEVYEAEDTRKRRVVALKLISPEFSGDPVFRARMQREADA  64

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRLTEPH+VPIHDYGEI+G+ F+EMR++DGT L  LLK+ GPL+PARAVAIVRQIA+AL
Sbjct  65   AGRLTEPHVVPIHDYGEIDGKLFLEMRLVDGTDLATLLKRSGPLSPARAVAIVRQIASAL  124

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAH  GVTHRDVKPENIL+T  DFAYLVDFGIARAA+DPGLT+ GTA+GTY+YMAPERF
Sbjct  125  DAAHTTGVTHRDVKPENILITDDDFAYLVDFGIARAATDPGLTRAGTAMGTYSYMAPERF  184

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            TGDEVTYRADIY+LACVL ECLTG+PPY  DS+ER + AHL  PAPQPS+LRPG+VP A 
Sbjct  185  TGDEVTYRADIYSLACVLNECLTGSPPYPTDSIERAVGAHLTQPAPQPSRLRPGKVPQAF  244

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQ  281
            D+VIAKGMAK+P ER+ SAG+LA AAH AL+  EQ
Sbjct  245  DEVIAKGMAKDPGERYRSAGELAAAAHQALSAPEQ  279


>gi|31792458|ref|NP_854951.1| transmembrane serine/threonine-protein kinase H [Mycobacterium 
bovis AF2122/97]
 gi|61214289|sp|Q7U095.1|PKNH_MYCBO RecName: Full=Probable serine/threonine-protein kinase pknH
 gi|31618047|emb|CAD94158.1| PROBABLE TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE H PKNH 
(PROTEIN KINASE H) (STPK H) [Mycobacterium bovis AF2122/97]
Length=596

 Score =  422 bits (1086),  Expect = 8e-116, Method: Compositional matrix adjust.
 Identities = 216/365 (60%), Positives = 264/365 (73%), Gaps = 26/365 (7%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  306

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADS--------RGGNW--PSQ  351
                + +   I  A TG P+     W+P      +GP+ A          +GG W  P  
Sbjct  307  PTMPTVTPPPIQAAPTGQPS-----WAPN-----SGPMPASGPTPTPQYYQGGGWGAPPS  356

Query  352  TGHSP  356
             G SP
Sbjct  357  GGPSP  361


>gi|121637194|ref|YP_977417.1| putative transmembrane serine/threonine-protein kinase H pknH 
[Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224989669|ref|YP_002644356.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium 
bovis BCG str. Tokyo 172]
 gi|121492841|emb|CAL71312.1| Probable transmembrane serine/threonine-protein kinase H pknH 
[Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|224772782|dbj|BAH25588.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium 
bovis BCG str. Tokyo 172]
 gi|341601212|emb|CCC63885.1| probable transmembrane serine/threonine-protein kinase H pknH 
[Mycobacterium bovis BCG str. Moreau RDJ]
Length=596

 Score =  422 bits (1086),  Expect = 8e-116, Method: Compositional matrix adjust.
 Identities = 216/365 (60%), Positives = 264/365 (73%), Gaps = 26/365 (7%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  306

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADS--------RGGNW--PSQ  351
                + +   I  A TG P+     W+P      +GP+ A          +GG W  P  
Sbjct  307  PTMPTVTPPPIQAAPTGQPS-----WAPN-----SGPMPASGPTPTPQYYQGGGWGAPPS  356

Query  352  TGHSP  356
             G SP
Sbjct  357  GGPSP  361


>gi|289569275|ref|ZP_06449502.1| predicted protein [Mycobacterium tuberculosis T17]
 gi|289543029|gb|EFD46677.1| predicted protein [Mycobacterium tuberculosis T17]
Length=588

 Score =  419 bits (1077),  Expect = 8e-115, Method: Compositional matrix adjust.
 Identities = 215/360 (60%), Positives = 261/360 (73%), Gaps = 16/360 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  20   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  79

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  80   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  139

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  140  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  199

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  200  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  258

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  259  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  318

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAG---PLAADSRGGNW--PSQTGHSP  356
                + +   I  A TG P+     W+P      A    P     +GG W  P   G SP
Sbjct  319  PTMPTVTPPPIQAAPTGQPS-----WAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSP  373


>gi|289442704|ref|ZP_06432448.1| transmembrane serine/threonine-protein kinase H PknH [Mycobacterium 
tuberculosis T46]
 gi|289415623|gb|EFD12863.1| transmembrane serine/threonine-protein kinase H PknH [Mycobacterium 
tuberculosis T46]
Length=576

 Score =  419 bits (1077),  Expect = 9e-115, Method: Compositional matrix adjust.
 Identities = 215/360 (60%), Positives = 261/360 (73%), Gaps = 16/360 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  306

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAG---PLAADSRGGNW--PSQTGHSP  356
                + +   I  A TG P+     W+P      A    P     +GG W  P   G SP
Sbjct  307  PTMPTVTPPPIQAAPTGQPS-----WAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSP  361


>gi|289749818|ref|ZP_06509196.1| LOW QUALITY PROTEIN: transmembrane serine/threonine-protein kinase 
H pknH [Mycobacterium tuberculosis T92]
 gi|289690405|gb|EFD57834.1| LOW QUALITY PROTEIN: transmembrane serine/threonine-protein kinase 
H pknH [Mycobacterium tuberculosis T92]
Length=490

 Score =  418 bits (1075),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 215/360 (60%), Positives = 261/360 (73%), Gaps = 16/360 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  24   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  83

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  84   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  143

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  144  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  203

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  204  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  262

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  263  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  322

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAG---PLAADSRGGNW--PSQTGHSP  356
                + +   I  A TG P+     W+P      A    P     +GG W  P   G SP
Sbjct  323  PTMPTVTPPPIQAAPTGQPS-----WAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPSP  377


>gi|339294249|gb|AEJ46360.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis CCDC5079]
Length=638

 Score =  418 bits (1075),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  20   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  79

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  80   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  139

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  140  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  199

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  200  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  258

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  259  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  308


>gi|340626281|ref|YP_004744733.1| putative serine/threonine-protein kinase pknh [Mycobacterium 
canettii CIPT 140010059]
 gi|340004471|emb|CCC43614.1| putative serine/threonine-protein kinase pknh [Mycobacterium 
canettii CIPT 140010059]
Length=576

 Score =  418 bits (1075),  Expect = 1e-114, Method: Compositional matrix adjust.
 Identities = 214/360 (60%), Positives = 261/360 (73%), Gaps = 16/360 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTG--  304
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL  T A T   
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTLPGTAAVTAQP  306

Query  305  ---LSQSESGIAGAGTGPPTPGAARWSPGDSATVAG---PLAADSRGGNW--PSQTGHSP  356
                + +   I  A TG P+     W+P      A    P     +GG W  P   G +P
Sbjct  307  PTMPTVTPPPIQAAPTGQPS-----WAPNSGPMPASGPTPTPQYYQGGGWGAPPSGGPTP  361


>gi|340626279|ref|YP_004744731.1| putative transmembrane serine/threonine-protein kinase H [Mycobacterium 
canettii CIPT 140010059]
 gi|340004469|emb|CCC43612.1| putative transmembrane serine/threonine-protein kinase H PKNH 
(protein kinase H) (STPK H) [Mycobacterium canettii CIPT 140010059]
Length=626

 Score =  418 bits (1074),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|339297889|gb|AEJ49999.1| putative transmembrane serine/threonine-protein kinase H pknH 
[Mycobacterium tuberculosis CCDC5180]
Length=641

 Score =  418 bits (1074),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  23   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  82

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  83   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  142

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  143  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  202

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  203  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  261

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  262  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  311


>gi|289573926|ref|ZP_06454153.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis K85]
 gi|339631332|ref|YP_004722974.1| Ser/Thr protein kinase [Mycobacterium africanum GM041182]
 gi|289538357|gb|EFD42935.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis K85]
 gi|339330688|emb|CCC26357.1| putative membrane spanning serine/threonine protein kinase [Mycobacterium 
africanum GM041182]
Length=626

 Score =  418 bits (1074),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|15840712|ref|NP_335749.1| serine/threonine protein kinase [Mycobacterium tuberculosis CDC1551]
 gi|148661053|ref|YP_001282576.1| serine/threonine protein kinase [Mycobacterium tuberculosis H37Ra]
 gi|148822483|ref|YP_001287237.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis F11]
 48 more sequence titles
 Length=626

 Score =  418 bits (1074),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|289446857|ref|ZP_06436601.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis CPHL_A]
 gi|289419815|gb|EFD17016.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis CPHL_A]
Length=626

 Score =  417 bits (1073),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|15608406|ref|NP_215782.1| transmembrane serine/threonine-protein kinase H [Mycobacterium 
tuberculosis H37Rv]
 gi|6093725|sp|Q11053.2|PKNH_MYCTU RecName: Full=Probable serine/threonine-protein kinase pknH
 gi|3261596|emb|CAB00914.1| PROBABLE TRANSMEMBRANE SERINE/THREONINE-PROTEIN KINASE H PKNH 
(PROTEIN KINASE H) (STPK H) [Mycobacterium tuberculosis H37Rv]
Length=626

 Score =  417 bits (1073),  Expect = 2e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|289757365|ref|ZP_06516743.1| transmembrane serine/threonine-protein kinase H [Mycobacterium 
tuberculosis T85]
 gi|289712929|gb|EFD76941.1| transmembrane serine/threonine-protein kinase H [Mycobacterium 
tuberculosis T85]
Length=314

 Score =  417 bits (1071),  Expect = 5e-114, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  22   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  81

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  82   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  141

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  142  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  201

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  202  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  260

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  261  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  310


>gi|307083827|ref|ZP_07492940.1| putative protein kinase domain protein [Mycobacterium tuberculosis 
SUMu012]
 gi|308366510|gb|EFP55361.1| putative protein kinase domain protein [Mycobacterium tuberculosis 
SUMu012]
Length=353

 Score =  415 bits (1066),  Expect = 1e-113, Method: Compositional matrix adjust.
 Identities = 196/290 (68%), Positives = 237/290 (82%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  247  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  296


>gi|289753342|ref|ZP_06512720.1| predicted protein [Mycobacterium tuberculosis EAS054]
 gi|289693929|gb|EFD61358.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length=319

 Score =  412 bits (1060),  Expect = 7e-113, Method: Compositional matrix adjust.
 Identities = 195/288 (68%), Positives = 235/288 (82%), Gaps = 1/288 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  23   RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARI  82

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  83   AGRLQEPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  142

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  143  DAAHADGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  202

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A 
Sbjct  203  SNDEVTYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAF  261

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNA  294
            D V+A+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   A
Sbjct  262  DAVVARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQAA  309


>gi|289554945|ref|ZP_06444155.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis KZN 605]
 gi|289439577|gb|EFD22070.1| transmembrane serine/threonine-protein kinase H pknH [Mycobacterium 
tuberculosis KZN 605]
Length=615

 Score =  412 bits (1059),  Expect = 9e-113, Method: Compositional matrix adjust.
 Identities = 193/285 (68%), Positives = 233/285 (82%), Gaps = 1/285 (0%)

Query  12   FGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADTAGRLT  71
            FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  AGRL 
Sbjct  2    FGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTAEFSKDPVFRERMKREARIAGRLQ  61

Query  72   EPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAALDAAHA  131
            EPH+VPIHDYGE++GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+ALDAAHA
Sbjct  62   EPHVVPIHDYGEVDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASALDAAHA  121

Query  132  NGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERFTGDEV  191
            +GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF+ DEV
Sbjct  122  DGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERFSNDEV  181

Query  192  TYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPALDQVIA  251
            TYRADIYALACVL ECLTGAPPYRADS   L+++HLM P PQPS +RPG +P A D V+A
Sbjct  182  TYRADIYALACVLHECLTGAPPYRADSAGTLVSSHLMGPIPQPSAIRPG-IPKAFDAVVA  240

Query  252  KGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            +GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   +TL
Sbjct  241  RGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQESTL  285


>gi|183984127|ref|YP_001852418.1| transmembrane serine/threonine-protein kinase H PknH [Mycobacterium 
marinum M]
 gi|183177453|gb|ACC42563.1| transmembrane serine/threonine-protein kinase H PknH [Mycobacterium 
marinum M]
Length=596

 Score =  412 bits (1059),  Expect = 1e-112, Method: Compositional matrix adjust.
 Identities = 231/423 (55%), Positives = 275/423 (66%), Gaps = 41/423 (9%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++ ++S + VFR RM+REA  
Sbjct  8    RVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMTTEFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGEI+GQ F+EMR+I+GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEIDGQMFLEMRLIEGTDLDSILKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA+GV HRDVKP NIL+T  DFAYLVDFGIA A  D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHADGVMHRDVKPPNILITRDDFAYLVDFGIASATGDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
              +EVTYRADIYALACVL ECLTG+PPYR+DS   L+ AHLMDP PQ S +R G +P A 
Sbjct  188  ANEEVTYRADIYALACVLFECLTGSPPYRSDSAGTLVTAHLMDPVPQVSTVRSG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D VIA+GMAK P ER+ SAGDLA AAHDAL+  +Q  A  ILRR   +TL  T A T   
Sbjct  247  DAVIARGMAKKPEERYASAGDLARAAHDALSNPDQDHAADILRRSRESTLPGTAAITPQP  306

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGN--WPSQTG-----HSPA-V  358
             +   +       P P      P  S    GPL   +  G   W   +G     H PA V
Sbjct  307  PTMPAVT------PPPAMPYADPASS----GPLPQSAPTGQPGWAPASGPIPAAHQPAQV  356

Query  359  PNALQA------------------SLGHAVPPAGNKRKVWAVV-GAAAIVLVAIVAAAGY  399
            P   Q+                  +  +  PP   KR  W +V G AA+V V IV   G 
Sbjct  357  PQYYQSGSWASTPPGTPPQQPVGPTPWNQPPP---KRNPWPIVAGVAALVFVLIVGGIGV  413

Query  400  LVL  402
             ++
Sbjct  414  WLV  416


>gi|240172492|ref|ZP_04751151.1| transmembrane serine/threonine-protein kinase D pknD [Mycobacterium 
kansasii ATCC 12478]
Length=260

 Score =  408 bits (1049),  Expect = 2e-111, Method: Compositional matrix adjust.
 Identities = 209/259 (81%), Positives = 223/259 (87%), Gaps = 0/259 (0%)

Query  405  SWSPTQASGQTVLPFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP  464
            S   T ASGQTVLPF GIDFRLSP GVAVD+AGNVYVTSEGMYGRVVKLA GS+  TVLP
Sbjct  1    SHPSTPASGQTVLPFKGIDFRLSPGGVAVDTAGNVYVTSEGMYGRVVKLANGSSTATVLP  60

Query  465  FNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVY  524
            FNGLYQPQGLAVDGAG VYVTDFNNRVV L AGSN+QTVLPFDGL+YPEG+AVD QG+VY
Sbjct  61   FNGLYQPQGLAVDGAGAVYVTDFNNRVVMLPAGSNSQTVLPFDGLDYPEGVAVDAQGSVY  120

Query  525  VADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN  584
            VADRGN+RVVKLAAG+KTQTVLPF GL +PDGVAVD +G VYV DTDNNRVVKL A S+N
Sbjct  121  VADRGNSRVVKLAAGAKTQTVLPFDGLKNPDGVAVDGAGAVYVADTDNNRVVKLAAGSDN  180

Query  585  QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVD  644
            Q VL F +++ PWGIAVD  G VYVTEHN N VVKL AGS T TVLPFTGLNTPLAVAVD
Sbjct  181  QTVLAFRELSVPWGIAVDTVGNVYVTEHNKNDVVKLDAGSNTQTVLPFTGLNTPLAVAVD  240

Query  645  SDRTVYVADRGNDRVVKLT  663
            S   VYVADRGNDR VKLT
Sbjct  241  SAGNVYVADRGNDRAVKLT  259


>gi|342862145|ref|ZP_08718788.1| serine/threonine protein kinase [Mycobacterium colombiense CECT 
3035]
 gi|342130449|gb|EGT83764.1| serine/threonine protein kinase [Mycobacterium colombiense CECT 
3035]
Length=624

 Score =  406 bits (1043),  Expect = 7e-111, Method: Compositional matrix adjust.
 Identities = 194/290 (67%), Positives = 232/290 (80%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            + GS FGPY L RLLGRGGMGEVYEAE T K   VA+KL+S  +S + VFR R++REA T
Sbjct  8    RAGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLLSESFSRDPVFRERLKREART  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VP+HDYGEI+GQ F+EMR+++GT L ++LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPVHDYGEIDGQMFLEMRLVEGTDLDSVLKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GV HRD+KP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHAGGVMHRDIKPQNILLTRDDFAYLVDFGIASATTDDKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            +  EVTYRADIYALACVL ECLTG PPYRADS   L++AH+M+P P PS+ RPG VP A 
Sbjct  188  SDAEVTYRADIYALACVLFECLTGTPPYRADSAGVLVSAHMMEPIPAPSEQRPG-VPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D VIA+GMAK P +R+ SAGDLA+AA  AL+  +Q +A TILRR   A L
Sbjct  247  DAVIARGMAKKPEDRYASAGDLALAAKQALSNPDQDRAATILRRSQEAAL  296


>gi|296170175|ref|ZP_06851770.1| non-specific serine/threonine protein kinase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895167|gb|EFG74883.1| non-specific serine/threonine protein kinase [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=625

 Score =  405 bits (1041),  Expect = 1e-110, Method: Compositional matrix adjust.
 Identities = 203/293 (70%), Positives = 236/293 (81%), Gaps = 1/293 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY+L RLLGRGGMGEVYEAE T K   VA+KL+S  +S + VFR RM+REA T
Sbjct  8    RVGSNFGPYRLKRLLGRGGMGEVYEAEHTVKEWTVAVKLLSESFSRDPVFRERMKREART  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGEI+GQ F+EMR+I+GT L ++LK++GPL P RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPIHDYGEIDGQMFLEMRLIEGTDLDSVLKRFGPLAPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GV HRDVKP+NIL+T  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHAAGVMHRDVKPQNILITRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            +  EVTYRADIYALACVL ECLTG PPYRADS   L+ AH+MDP PQP+ LRPG +P A 
Sbjct  188  SNAEVTYRADIYALACVLYECLTGTPPYRADSASVLVTAHMMDPIPQPTALRPG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLAT  299
            D VIA+GMAK P +R+ SAGDLA+AAHDAL+  +Q  A TILRR   ATL  T
Sbjct  247  DAVIARGMAKKPQDRYASAGDLALAAHDALSDPDQDHAATILRRSQEATLPGT  299


>gi|120405645|ref|YP_955474.1| protein kinase [Mycobacterium vanbaalenii PYR-1]
 gi|119958463|gb|ABM15468.1| protein kinase [Mycobacterium vanbaalenii PYR-1]
Length=574

 Score =  400 bits (1029),  Expect = 3e-109, Method: Compositional matrix adjust.
 Identities = 195/292 (67%), Positives = 233/292 (80%), Gaps = 1/292 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGSQ GPY+L RLLG+GGMGEVYEAEDT K RVVALKL+    S + VFR R+QREA  
Sbjct  9    RVGSQVGPYRLRRLLGKGGMGEVYEAEDTVKDRVVALKLLPEAVSHDPVFRKRLQREAHA  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGE++G  FV+MR+IDGT LR LLK+ GP+TPARA AIV Q+A+AL
Sbjct  69   AGRLQEPHVVPIHDYGEVDGLLFVDMRLIDGTDLRKLLKEQGPMTPARATAIVAQVASAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAH NG+ HRDVKPENIL+   DFAYLVDFGIA A +D  LT+ GTAVGTY YMAPERF
Sbjct  129  DAAHQNGIMHRDVKPENILINRDDFAYLVDFGIANAVTDEALTELGTAVGTYAYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            T  EVT+RAD+YAL CVL ECLTGA P++ DSV  +I AHL DPAP+PSQ RPG +P  L
Sbjct  189  TNGEVTHRADVYALTCVLHECLTGAQPFQGDSVSVVITAHLNDPAPRPSQSRPG-IPAGL  247

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLA  298
            D VI++GMAK P +R+ SAG++A AA  ALT ++Q QA +IL+R   AT++A
Sbjct  248  DDVISRGMAKRPEDRYASAGEMARAATAALTGAQQDQADSILQRSQAATMMA  299


>gi|183984142|ref|YP_001852433.1| transmembrane serine/threonine-protein kinase [Mycobacterium 
marinum M]
 gi|183177468|gb|ACC42578.1| transmembrane serine/threonine-protein kinase [Mycobacterium 
marinum M]
Length=667

 Score =  400 bits (1027),  Expect = 5e-109, Method: Compositional matrix adjust.
 Identities = 199/290 (69%), Positives = 233/290 (81%), Gaps = 1/290 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY+L RLLGRGGMGEVYEAE T K   VA+KL+S  +S + VFR RM+REA  
Sbjct  8    RVGSTFGPYRLTRLLGRGGMGEVYEAEHTVKEWTVAVKLMSETFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
             GRL EPH+VPIHDYGEI+GQ ++EMR+I+GT L  LLK++GPLTP RAVAI+ Q+A+AL
Sbjct  68   TGRLQEPHVVPIHDYGEIDGQMYLEMRLIEGTDLDNLLKRFGPLTPPRAVAIITQVASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GV HRDVKP+NILVT  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHAAGVMHRDVKPQNILVTREDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTG+PPYRADS   L+ AH+MDP PQPS +R G +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGSPPYRADSASMLVTAHMMDPIPQPSTVRAG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATL  296
            D VIA+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   ATL
Sbjct  247  DTVIARGMAKQPGDRYASAGDLALAAHEALSNPDQDHAADILRRSQEATL  296


>gi|240173452|ref|ZP_04752110.1| transmembrane serine/threonine-protein kinase [Mycobacterium 
kansasii ATCC 12478]
Length=353

 Score =  398 bits (1023),  Expect = 2e-108, Method: Compositional matrix adjust.
 Identities = 202/294 (69%), Positives = 234/294 (80%), Gaps = 1/294 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY+L RLLGRGGMGEVYEAE T K   VA+KL+S  +S + VFR RM+REA  
Sbjct  8    RVGSTFGPYRLKRLLGRGGMGEVYEAEHTVKEWTVAVKLMSETFSKDPVFRERMKREARI  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
             GRL EPH+VPIHDYGEI+GQ ++EMR+I+GT L  +LK++GPLTP RAVAI+ QIA+AL
Sbjct  68   TGRLQEPHVVPIHDYGEIDGQMYLEMRLIEGTDLDHILKRFGPLTPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GV HRDVKP+NILVT  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHAAGVMHRDVKPQNILVTRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            + DEVTYRADIYALACVL ECLTG+PPYRADS   L+ AHLMDP PQPS LR G +P A 
Sbjct  188  SNDEVTYRADIYALACVLHECLTGSPPYRADSASMLVTAHLMDPIPQPSTLRSG-IPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATP  300
            D VIA+GMAK P +R+ SAGDLA+AAH+AL+  +Q  A  ILRR   ATL   P
Sbjct  247  DAVIARGMAKKPEDRYASAGDLALAAHEALSDPDQDHAADILRRSQEATLPGPP  300


>gi|145222614|ref|YP_001133292.1| protein kinase [Mycobacterium gilvum PYR-GCK]
 gi|145215100|gb|ABP44504.1| protein kinase [Mycobacterium gilvum PYR-GCK]
Length=561

 Score =  395 bits (1016),  Expect = 1e-107, Method: Compositional matrix adjust.
 Identities = 196/291 (68%), Positives = 228/291 (79%), Gaps = 1/291 (0%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGSQ GPY+L RLLG+GGMGEVYEA DT K RVVALKL+    S + VFR R+QREA  
Sbjct  9    RVGSQVGPYRLQRLLGKGGMGEVYEAYDTVKDRVVALKLLPESASHDPVFRKRLQREAHA  68

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VPIHDYGEI+G  FV+MRMIDG  LR +LK+ G ++PARA AIVRQIA+AL
Sbjct  69   AGRLQEPHVVPIHDYGEIDGLLFVDMRMIDGVDLRRILKEQGAMSPARATAIVRQIASAL  128

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAH  G+ HRDVKPENILVT  DFAYLVDFGIA AA+D  LT+ GTAVGTY YMAPERF
Sbjct  129  DAAHRAGIMHRDVKPENILVTRDDFAYLVDFGIANAATDESLTELGTAVGTYAYMAPERF  188

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
               EVT+RAD+YAL CVL ECLTG  P+  DSV  +I AHL  PAP+PS LR G +P  L
Sbjct  189  AAGEVTHRADVYALTCVLHECLTGTQPFEGDSVSVVITAHLNQPAPRPSSLRQG-IPAGL  247

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLL  297
            D+VIA+GMAK P +RF SAG+LA AA DALT +EQ QA +IL+R   AT++
Sbjct  248  DEVIARGMAKRPEDRFASAGELADAATDALTRAEQDQAASILQRSQAATMM  298


>gi|118465657|ref|YP_880659.1| serine/threonine protein kinase [Mycobacterium avium 104]
 gi|118166944|gb|ABK67841.1| serine/threonine-protein kinase PknE [Mycobacterium avium 104]
 gi|336458610|gb|EGO37577.1| protein kinase family protein [Mycobacterium avium subsp. paratuberculosis 
S397]
Length=604

 Score =  394 bits (1011),  Expect = 4e-107, Method: Compositional matrix adjust.
 Identities = 215/351 (62%), Positives = 257/351 (74%), Gaps = 17/351 (4%)

Query  7    QVGSQFGPYQLLRLLGRGGMGEVYEAEDTRKHRVVALKLISPQYSDNAVFRARMQREADT  66
            +VGS FGPY L RLLGRGGMGEVYEAE T K   VA+KL++  +S + VFR RM+REA T
Sbjct  8    KVGSMFGPYHLKRLLGRGGMGEVYEAEHTVKEWTVAVKLLNESFSSDPVFRERMKREART  67

Query  67   AGRLTEPHIVPIHDYGEINGQFFVEMRMIDGTSLRALLKQYGPLTPARAVAIVRQIAAAL  126
            AGRL EPH+VP+HDYGEI+GQ F+EMR+++GT L ++LK++GPL P RAVAI+ QIA+AL
Sbjct  68   AGRLQEPHVVPVHDYGEIDGQMFLEMRLVEGTDLDSVLKRFGPLPPPRAVAIITQIASAL  127

Query  127  DAAHANGVTHRDVKPENILVTASDFAYLVDFGIARAASDPGLTQTGTAVGTYNYMAPERF  186
            DAAHA GV HRDVKP+NILVT  DFAYLVDFGIA A +D  LTQ GTAVGT+ YMAPERF
Sbjct  128  DAAHAAGVMHRDVKPQNILVTRDDFAYLVDFGIASATTDEKLTQLGTAVGTWKYMAPERF  187

Query  187  TGDEVTYRADIYALACVLGECLTGAPPYRADSVERLIAAHLMDPAPQPSQLRPGRVPPAL  246
            +  EVTYRADIYALACVL ECLTG+ PYRADS   L++AH+MDP P PS  RPG VP A 
Sbjct  188  SDAEVTYRADIYALACVLFECLTGSAPYRADSAGVLVSAHVMDPIPAPSARRPG-VPKAF  246

Query  247  DQVIAKGMAKNPAERFMSAGDLAIAAHDALTTSEQHQATTILRRGDNATLLATPADTGLS  306
            D VIA+GMAK P +R+ SAGDLA+AA +AL+T +Q +A TILRR   A L A        
Sbjct  247  DAVIARGMAKKPEDRYASAGDLALAAKEALSTPDQDRAATILRRSQEAALPAA------G  300

Query  307  QSESGIAGAGTGPPTPGAARWSPGDSATVAGPLAADSRGGNWPSQTGHSPA  357
            Q ++G A     PP P      PG +A+ AG      RG  W  ++G  PA
Sbjct  301  QRDAG-ASTVLAPP-PAVNTRQPGSAASQAG------RG--WTPESGPIPA  341



Lambda     K      H
   0.315    0.132    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 1552108761280




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40