BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0952
Length=303
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608092|ref|NP_215467.1| succinyl-CoA synthetase subunit alp... 603 1e-170
gi|289761087|ref|ZP_06520465.1| succinyl-CoA synthetase (alpha c... 602 2e-170
gi|339293957|gb|AEJ46068.1| succinyl-CoA synthetase subunit alph... 601 4e-170
gi|31792141|ref|NP_854634.1| succinyl-CoA synthetase subunit alp... 601 4e-170
gi|298524444|ref|ZP_07011853.1| succinyl-CoA ligase subunit alph... 599 1e-169
gi|167967814|ref|ZP_02550091.1| succinyl-CoA synthetase subunit ... 595 3e-168
gi|254231259|ref|ZP_04924586.1| succinyl-CoA synthetase (alpha c... 594 5e-168
gi|254549932|ref|ZP_05140379.1| succinyl-CoA synthetase subunit ... 586 1e-165
gi|289744683|ref|ZP_06504061.1| succinyl-CoA synthetase alpha su... 586 2e-165
gi|333989538|ref|YP_004522152.1| succinyl-CoA synthetase (subuni... 543 2e-152
gi|240172865|ref|ZP_04751524.1| succinyl-CoA synthetase subunit ... 538 6e-151
gi|183984519|ref|YP_001852810.1| succinyl-CoA synthetase (alpha ... 529 2e-148
gi|118619788|ref|YP_908120.1| succinyl-CoA synthetase subunit al... 526 1e-147
gi|15826979|ref|NP_301242.1| succinyl-CoA synthetase subunit alp... 525 5e-147
gi|169628152|ref|YP_001701801.1| succinyl-CoA synthetase subunit... 518 3e-145
gi|289757037|ref|ZP_06516415.1| succinyl-CoA synthetase subunit ... 518 3e-145
gi|289568925|ref|ZP_06449152.1| succinyl-CoA synthetase subunit ... 517 9e-145
gi|54026964|ref|YP_121206.1| succinyl-CoA synthetase subunit alp... 516 2e-144
gi|145222456|ref|YP_001133134.1| succinyl-CoA synthetase subunit... 514 6e-144
gi|343927256|ref|ZP_08766734.1| succinyl-CoA synthetase alpha su... 513 2e-143
gi|312138583|ref|YP_004005919.1| succinyl-CoA synthetase alpha s... 511 4e-143
gi|226365052|ref|YP_002782835.1| succinyl-CoA synthetase subunit... 511 5e-143
gi|111022540|ref|YP_705512.1| succinyl-CoA synthetase subunit al... 511 7e-143
gi|262201314|ref|YP_003272522.1| succinyl-CoA synthetase subunit... 506 2e-141
gi|226307915|ref|YP_002767875.1| succinyl-CoA synthetase alpha s... 505 3e-141
gi|108801290|ref|YP_641487.1| succinyl-CoA synthetase subunit al... 503 2e-140
gi|126437271|ref|YP_001072962.1| succinyl-CoA synthetase subunit... 502 3e-140
gi|254823467|ref|ZP_05228468.1| succinyl-CoA synthetase subunit ... 502 3e-140
gi|342860561|ref|ZP_08717212.1| succinyl-CoA synthetase subunit ... 501 7e-140
gi|120405819|ref|YP_955648.1| succinyl-CoA synthetase subunit al... 500 1e-139
gi|118469852|ref|YP_889761.1| succinyl-CoA synthetase subunit al... 499 2e-139
gi|296140991|ref|YP_003648234.1| succinyl-CoA synthetase subunit... 498 4e-139
gi|296169712|ref|ZP_06851329.1| succinyl-CoA synthetase subunit ... 498 6e-139
gi|326383704|ref|ZP_08205389.1| succinyl-CoA synthetase subunit ... 493 2e-137
gi|289442368|ref|ZP_06432112.1| succinyl-CoA ligase [Mycobacteri... 491 7e-137
gi|323357165|ref|YP_004223561.1| succinyl-CoA synthetase, alpha ... 486 3e-135
gi|296393908|ref|YP_003658792.1| succinyl-CoA synthetase subunit... 481 6e-134
gi|184201463|ref|YP_001855670.1| succinyl-CoA synthetase subunit... 479 2e-133
gi|41406995|ref|NP_959831.1| succinyl-CoA synthetase subunit alp... 478 6e-133
gi|254773955|ref|ZP_05215471.1| succinyl-CoA synthetase subunit ... 476 2e-132
gi|118462581|ref|YP_880329.1| succinyl-CoA synthetase subunit al... 476 3e-132
gi|319947697|ref|ZP_08021911.1| succinyl-CoA synthetase subunit ... 468 6e-130
gi|295396403|ref|ZP_06806565.1| succinyl-CoA synthetase subunit ... 465 4e-129
gi|163839117|ref|YP_001623522.1| succinyl-CoA synthetase subunit... 464 6e-129
gi|325001242|ref|ZP_08122354.1| succinyl-CoA synthetase subunit ... 461 7e-128
gi|88855830|ref|ZP_01130493.1| succinyl-CoA synthetase alpha sub... 460 1e-127
gi|50955503|ref|YP_062791.1| succinyl-CoA synthetase subunit alp... 460 1e-127
gi|331699079|ref|YP_004335318.1| succinyl-CoA synthetase subunit... 458 5e-127
gi|317508745|ref|ZP_07966397.1| succinate-CoA ligase [Segnilipar... 457 8e-127
gi|326904828|gb|EGE51761.1| LOW QUALITY PROTEIN: succinyl-CoA sy... 456 2e-126
>gi|15608092|ref|NP_215467.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
H37Rv]
gi|15840376|ref|NP_335413.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
CDC1551]
gi|148660731|ref|YP_001282254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
H37Ra]
42 more sequence titles
Length=303
Score = 603 bits (1554), Expect = 1e-170, Method: Compositional matrix adjust.
Identities = 303/303 (100%), Positives = 303/303 (100%), Gaps = 0/303 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
Query 301 LSL 303
LSL
Sbjct 301 LSL 303
>gi|289761087|ref|ZP_06520465.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis
GM 1503]
gi|289708593|gb|EFD72609.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis
GM 1503]
Length=303
Score = 602 bits (1553), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 303/303 (100%), Gaps = 0/303 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEA+DAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAVDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
Query 301 LSL 303
LSL
Sbjct 301 LSL 303
>gi|339293957|gb|AEJ46068.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
CCDC5079]
Length=303
Score = 601 bits (1550), Expect = 4e-170, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 302/303 (99%), Gaps = 0/303 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSII VPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIILVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
Query 301 LSL 303
LSL
Sbjct 301 LSL 303
>gi|31792141|ref|NP_854634.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis AF2122/97]
gi|121636877|ref|YP_977100.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224989348|ref|YP_002644035.1| succinyl-CoA synthetase subunit alpha [Mycobacterium bovis BCG
str. Tokyo 172]
17 more sequence titles
Length=303
Score = 601 bits (1550), Expect = 4e-170, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 303/303 (100%), Gaps = 0/303 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
Query 301 LSL 303
LSL
Sbjct 301 LSL 303
>gi|298524444|ref|ZP_07011853.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis
94_M4241A]
gi|298494238|gb|EFI29532.1| succinyl-CoA ligase subunit alpha [Mycobacterium tuberculosis
94_M4241A]
Length=309
Score = 599 bits (1545), Expect = 1e-169, Method: Compositional matrix adjust.
Identities = 301/301 (100%), Positives = 301/301 (100%), Gaps = 0/301 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
Query 301 L 301
L
Sbjct 301 L 301
>gi|167967814|ref|ZP_02550091.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
H37Ra]
gi|294996437|ref|ZP_06802128.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
210]
gi|297633474|ref|ZP_06951254.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
KZN 4207]
gi|297730459|ref|ZP_06959577.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
KZN R506]
gi|313657787|ref|ZP_07814667.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
KZN V2475]
Length=300
Score = 595 bits (1534), Expect = 3e-168, Method: Compositional matrix adjust.
Identities = 300/300 (100%), Positives = 300/300 (100%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL
Sbjct 1 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG
Sbjct 121 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 300
>gi|254231259|ref|ZP_04924586.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis
C]
gi|124600318|gb|EAY59328.1| succinyl-CoA synthetase (alpha chain) sucD [Mycobacterium tuberculosis
C]
Length=298
Score = 594 bits (1532), Expect = 5e-168, Method: Compositional matrix adjust.
Identities = 298/298 (100%), Positives = 298/298 (100%), Gaps = 0/298 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
>gi|254549932|ref|ZP_05140379.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length=295
Score = 586 bits (1511), Expect = 1e-165, Method: Compositional matrix adjust.
Identities = 295/295 (100%), Positives = 295/295 (100%), Gaps = 0/295 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL
Sbjct 1 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG
Sbjct 121 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 295
>gi|289744683|ref|ZP_06504061.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis
02_1987]
gi|289685211|gb|EFD52699.1| succinyl-CoA synthetase alpha subunit sucD [Mycobacterium tuberculosis
02_1987]
Length=355
Score = 586 bits (1510), Expect = 2e-165, Method: Compositional matrix adjust.
Identities = 294/294 (100%), Positives = 294/294 (100%), Gaps = 0/294 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAA 294
PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAA
Sbjct 241 PVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAA 294
>gi|333989538|ref|YP_004522152.1| succinyl-CoA synthetase (subunit alpha) SucD [Mycobacterium sp.
JDM601]
gi|333485506|gb|AEF34898.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium sp.
JDM601]
Length=300
Score = 543 bits (1398), Expect = 2e-152, Method: Compositional matrix adjust.
Identities = 269/300 (90%), Positives = 286/300 (96%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIF+++D+KVIVQGITGSEAT+HTARMLRAGTQIVGGVNARKAGTTVTHEDKGGR+IKL
Sbjct 1 MSIFVNKDSKVIVQGITGSEATIHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRMIKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG VAEAME TGADVSI FVPP FAKDA+IEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGGVAEAMEATGADVSIAFVPPKFAKDAMIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NL+ G KTRIIGPNCPGII+PG+ L GITPA I+G GPIGLVSKSGTLTYQMM+ELRD G
Sbjct 121 NLDHGQKTRIIGPNCPGIITPGECLVGITPATISGSGPIGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPATKVIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILQSL 300
>gi|240172865|ref|ZP_04751524.1| succinyl-CoA synthetase subunit alpha [Mycobacterium kansasii
ATCC 12478]
Length=300
Score = 538 bits (1385), Expect = 6e-151, Method: Compositional matrix adjust.
Identities = 278/300 (93%), Positives = 291/300 (97%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL+++NKVIVQGITGSEATVHTARML+AGT IVGGVNARKAGTTVTHEDKGGRL+KL
Sbjct 1 MAIFLTKENKVIVQGITGSEATVHTARMLKAGTHIVGGVNARKAGTTVTHEDKGGRLVKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSV EAMEKTGADVSIIFVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVTEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PGQ+L GITPANITGPGPIGLVSKSGTLTYQMMFELRDLG
Sbjct 121 NMQKGGKTRIIGPNCPGIITPGQALVGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILKTL 300
>gi|183984519|ref|YP_001852810.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum
M]
gi|183177845|gb|ACC42955.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium marinum
M]
Length=300
Score = 529 bits (1363), Expect = 2e-148, Method: Compositional matrix adjust.
Identities = 275/300 (92%), Positives = 287/300 (96%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++DNKVIVQGITGSEATVHTARML+AGTQIVGGVNARKAGTTVTHEDKGGR+IKL
Sbjct 1 MSIFLNKDNKVIVQGITGSEATVHTARMLKAGTQIVGGVNARKAGTTVTHEDKGGRVIKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG VAEAMEKTGADVSIIFVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NL G KTRIIGPNCPGII+PGQ+L GITPANITG GP+GLVSKSGTLTYQMMFELRD G
Sbjct 121 NLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
F+T+IGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIK NVSKPVV
Sbjct 181 FTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGV+VGKTPS TA LAREIL L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAMLAREILKGL 300
>gi|118619788|ref|YP_908120.1| succinyl-CoA synthetase subunit alpha [Mycobacterium ulcerans
Agy99]
gi|118571898|gb|ABL06649.1| succinyl-CoA synthetase (alpha chain) SucD [Mycobacterium ulcerans
Agy99]
Length=300
Score = 526 bits (1356), Expect = 1e-147, Method: Compositional matrix adjust.
Identities = 274/300 (92%), Positives = 286/300 (96%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++DNKVIVQGITGSEATVHTARML+AGTQIVGGVNARKAGTTVTHEDKGGR+IKL
Sbjct 1 MSIFLNKDNKVIVQGITGSEATVHTARMLKAGTQIVGGVNARKAGTTVTHEDKGGRVIKL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG VAEAMEKTGADVSIIFVPP FAKDAIIEAIDAEIPLLVVITE IPVQDTAYAWAY
Sbjct 61 PVFGGVAEAMEKTGADVSIIFVPPKFAKDAIIEAIDAEIPLLVVITEVIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NL G KTRIIGPNCPGII+PGQ+L GITPANITG GP+GLVSKSGTLTYQMMFELRD G
Sbjct 121 NLGKGGKTRIIGPNCPGIITPGQALVGITPANITGAGPVGLVSKSGTLTYQMMFELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
F+T+IGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIK NVSKPVV
Sbjct 181 FTTSIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGV+VGKTPS TA LAREIL L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVQVGKTPSETAVLAREILKGL 300
>gi|15826979|ref|NP_301242.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae TN]
gi|221229457|ref|YP_002502873.1| succinyl-CoA synthetase subunit alpha [Mycobacterium leprae Br4923]
gi|4455692|emb|CAB36666.1| probable succinyl-CoA synthetase alpha subunit [Mycobacterium
leprae]
gi|13092526|emb|CAC29664.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae]
gi|219932564|emb|CAR70249.1| succinyl-CoA synthase [alpha] chain [Mycobacterium leprae Br4923]
Length=300
Score = 525 bits (1351), Expect = 5e-147, Method: Compositional matrix adjust.
Identities = 259/300 (87%), Positives = 278/300 (93%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++DN VIVQGITGSEA VHTARML+AGTQIVGGVNARKAGT VTHEDK GR+I L
Sbjct 1 MAIFLTKDNTVIVQGITGSEAAVHTARMLKAGTQIVGGVNARKAGTNVTHEDKHGRIITL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA+E TGADVSIIFVPP FAK+AIIEA++AEIPLLV+ITEGIPVQD+ YAWAY
Sbjct 61 PVFGTVAEAIENTGADVSIIFVPPRFAKEAIIEAVEAEIPLLVIITEGIPVQDSVYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NL G KTRIIGPNCPGII+PGQSL GITPA ITG GPIGLVSKSGTLTYQMMFEL D G
Sbjct 121 NLNKGTKTRIIGPNCPGIITPGQSLVGITPATITGAGPIGLVSKSGTLTYQMMFELSDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEQDPDTKIIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAA K++ALEAAGVKVGKTPS TA L REIL +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAVKKDALEAAGVKVGKTPSETAVLVREILCTL 300
>gi|169628152|ref|YP_001701801.1| succinyl-CoA synthetase subunit alpha [Mycobacterium abscessus
ATCC 19977]
gi|169240119|emb|CAM61147.1| Succinyl-CoA synthetase, alpha chain [Mycobacterium abscessus]
Length=300
Score = 518 bits (1335), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 280/300 (94%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H DK G+ + L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDKSGQSVDL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEA+++TGADVSI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G+KTRIIGPNCPGII+PG++L GITP NITG GP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVEKGNKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK+EALEAAGVKVGKTPS TA LAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAKLAREILQSL 300
>gi|289757037|ref|ZP_06516415.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
T85]
gi|289712601|gb|EFD76613.1| succinyl-CoA synthetase subunit alpha [Mycobacterium tuberculosis
T85]
Length=291
Score = 518 bits (1335), Expect = 3e-145, Method: Compositional matrix adjust.
Identities = 263/275 (96%), Positives = 264/275 (96%), Gaps = 4/275 (1%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMG----HAGAIVSGSSGTA 271
PVVGYVAGFTAPEGKTMG H +V S G A
Sbjct 241 PVVGYVAGFTAPEGKTMGPRRRHRLRLVWHSGGQA 275
>gi|289568925|ref|ZP_06449152.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis
T17]
gi|289542679|gb|EFD46327.1| succinyl-CoA synthetase subunit alpha sucD [Mycobacterium tuberculosis
T17]
Length=310
Score = 517 bits (1331), Expect = 9e-145, Method: Compositional matrix adjust.
Identities = 257/258 (99%), Positives = 258/258 (100%), Gaps = 0/258 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVGYVAGFTAPEGKTMG 258
PVVGYVAGFTAPEGKTMG
Sbjct 241 PVVGYVAGFTAPEGKTMG 258
>gi|54026964|ref|YP_121206.1| succinyl-CoA synthetase subunit alpha [Nocardia farcinica IFM
10152]
gi|54018472|dbj|BAD59842.1| putative succinyl-CoA synthetase alpha subunit [Nocardia farcinica
IFM 10152]
Length=304
Score = 516 bits (1329), Expect = 2e-144, Method: Compositional matrix adjust.
Identities = 255/297 (86%), Positives = 279/297 (94%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGT+IVGGVNARKAGTTV+H DK G ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTKIVGGVNARKAGTTVSHTDKDGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA+++TGADVSI FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGTVAEAIKETGADVSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G+KTRIIGPNCPGII+PG+SL GITPANITG GPIGLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVEKGNKTRIIGPNCPGIITPGESLVGITPANITGKGPIGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDPVIGTTHIDAIEAFE+DP+TKLIVMIGEIGGDAEERAA +IK NV+KPVV
Sbjct 181 FSTSIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAAAYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK++ALEAAGVKVGKTPS TAALAREIL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREIL 297
>gi|145222456|ref|YP_001133134.1| succinyl-CoA synthetase subunit alpha [Mycobacterium gilvum PYR-GCK]
gi|315442902|ref|YP_004075781.1| succinyl-CoA synthetase (ADP-forming) subunit alpha [Mycobacterium
sp. Spyr1]
gi|145214942|gb|ABP44346.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
gilvum PYR-GCK]
gi|315261205|gb|ADT97946.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
sp. Spyr1]
Length=300
Score = 514 bits (1324), Expect = 6e-144, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 276/300 (92%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL+ D+KVIVQGITG E T HT ML+AGTQIVGGVNARKAGT VTH+DK G+ + L
Sbjct 1 MSIFLNADSKVIVQGITGGEGTKHTKLMLKAGTQIVGGVNARKAGTEVTHQDKDGKDVNL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEAM++TGADVSI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G KTRIIGPNCPGII+PG+SL GITP NITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 121 NVEKGEKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TKLIVMIGEIGGDAEE+AAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEEKAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVS +GTAA KQEALEAAGVKVGKTPS TAA ARE+L +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSDGAGTAAGKQEALEAAGVKVGKTPSETAAKARELLQNL 300
>gi|343927256|ref|ZP_08766734.1| succinyl-CoA synthetase alpha subunit [Gordonia alkanivorans
NBRC 16433]
gi|343762873|dbj|GAA13660.1| succinyl-CoA synthetase alpha subunit [Gordonia alkanivorans
NBRC 16433]
Length=300
Score = 513 bits (1320), Expect = 2e-143, Method: Compositional matrix adjust.
Identities = 253/300 (85%), Positives = 276/300 (92%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++DNKVIVQGITG E T HTA ML+AGT +VGGVNARKAGTTV+H D G ++L
Sbjct 1 MSIFLNKDNKVIVQGITGGEGTKHTALMLKAGTNVVGGVNARKAGTTVSHVDADGNNVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF SVAEAM++TGAD SI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFASVAEAMKETGADTSIAFVPPKFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G KTRIIGPNCPGII+PG++L GITP NITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 121 NVEKGAKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TKLIVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK+EALEAAGVKVGKTPS TA+LARE+ +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETASLARELFEAL 300
>gi|312138583|ref|YP_004005919.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S]
gi|325676350|ref|ZP_08156029.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC
33707]
gi|311887922|emb|CBH47234.1| succinyl-CoA synthetase alpha subunit [Rhodococcus equi 103S]
gi|325552911|gb|EGD22594.1| succinyl-CoA synthetase subunit alpha [Rhodococcus equi ATCC
33707]
Length=300
Score = 511 bits (1317), Expect = 4e-143, Method: Compositional matrix adjust.
Identities = 250/300 (84%), Positives = 279/300 (93%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H DK G ++L
Sbjct 1 MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHTDKDGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF +VAEAM++TGADVSI FVPP F+KDAI+EAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFATVAEAMKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G+KTRIIGPNCPGII+P ++L GITPANI G GP+GLVSKSGTLTYQMMFELR+ G
Sbjct 121 NVEKGNKTRIIGPNCPGIITPEEALVGITPANIAGKGPVGLVSKSGTLTYQMMFELREYG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TKLIVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK++ALEAAGVKVGKTPS TAALAREIL +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQNL 300
>gi|226365052|ref|YP_002782835.1| succinyl-CoA synthetase subunit alpha [Rhodococcus opacus B4]
gi|226243542|dbj|BAH53890.1| succinyl-CoA synthetase alpha chain [Rhodococcus opacus B4]
Length=300
Score = 511 bits (1316), Expect = 5e-143, Method: Compositional matrix adjust.
Identities = 256/300 (86%), Positives = 280/300 (94%), Gaps = 4/300 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTVTH+ GG ++L
Sbjct 1 MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVTHD--GG--VEL 56
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA+EKTGADVSI FVPP FAKDAI+EAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 57 PVFGTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY 116
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+ G+KTRIIGPNCPGII+PG+SL GITPANI G GPIGLVSKSGTLTYQMMFELRD G
Sbjct 117 NVSKGNKTRIIGPNCPGIITPGESLVGITPANIAGSGPIGLVSKSGTLTYQMMFELRDFG 176
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 177 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV 236
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK++ALEAAGVKVGKTPS TAALAREIL SL
Sbjct 237 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQSL 296
>gi|111022540|ref|YP_705512.1| succinyl-CoA synthetase subunit alpha [Rhodococcus jostii RHA1]
gi|110822070|gb|ABG97354.1| succinate--CoA ligase alpha subunit [Rhodococcus jostii RHA1]
Length=300
Score = 511 bits (1315), Expect = 7e-143, Method: Compositional matrix adjust.
Identities = 256/300 (86%), Positives = 280/300 (94%), Gaps = 4/300 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTVTH+ GG ++L
Sbjct 1 MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVTHD--GG--VEL 56
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA+EKTGADVSI FVPP FAKDAI+EAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 57 PVFGTVAEAIEKTGADVSIAFVPPAFAKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY 116
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+ G+KTRIIGPNCPGII+PG+SL GITPANI G GPIGLVSKSGTLTYQMMFELRD G
Sbjct 117 NVSKGNKTRIIGPNCPGIITPGESLVGITPANIAGTGPIGLVSKSGTLTYQMMFELRDFG 176
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 177 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV 236
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK++ALEAAGVKVGKTPS TAALAREIL SL
Sbjct 237 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKDALEAAGVKVGKTPSETAALAREILQSL 296
>gi|262201314|ref|YP_003272522.1| succinyl-CoA synthetase subunit alpha [Gordonia bronchialis DSM
43247]
gi|262084661|gb|ACY20629.1| succinyl-CoA synthetase, alpha subunit [Gordonia bronchialis
DSM 43247]
Length=304
Score = 506 bits (1303), Expect = 2e-141, Method: Compositional matrix adjust.
Identities = 255/304 (84%), Positives = 275/304 (91%), Gaps = 4/304 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++DNK+IVQGITG E T HTA ML+AG+ IVGGVNARKAGTTV H K G ++L
Sbjct 1 MSIFLNKDNKIIVQGITGGEGTKHTALMLKAGSNIVGGVNARKAGTTVAHTAKDGSDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEA+++TGAD SI FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVAEAIKETGADTSIAFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGH----KTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFEL 179
NLE G KTRIIGPNCPGII+P +SL GITPANITG GPIGLVSKSGTLTYQMM+EL
Sbjct 121 NLEKGGSEGPKTRIIGPNCPGIITPEESLVGITPANITGKGPIGLVSKSGTLTYQMMYEL 180
Query 180 RDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVS 239
RDLGFSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD++K NVS
Sbjct 181 RDLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYVKANVS 240
Query 240 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREI 299
KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTA AK+EALEAAGVKVGKTPS TA LARE+
Sbjct 241 KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAKLAREL 300
Query 300 LLSL 303
SL
Sbjct 301 YESL 304
>gi|226307915|ref|YP_002767875.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis
PR4]
gi|229495132|ref|ZP_04388878.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis
SK121]
gi|226187032|dbj|BAH35136.1| succinyl-CoA synthetase alpha subunit [Rhodococcus erythropolis
PR4]
gi|229318063|gb|EEN83938.1| succinate-CoA ligase, alpha subunit family [Rhodococcus erythropolis
SK121]
Length=300
Score = 505 bits (1301), Expect = 3e-141, Method: Compositional matrix adjust.
Identities = 250/300 (84%), Positives = 275/300 (92%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H G ++L
Sbjct 1 MAIFLTKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVAADGSPVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF +V EA+++TGADVSI FVPP F+KDAI+EAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFATVEEAIKETGADVSIAFVPPAFSKDAIVEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N G KTRIIGPNCPGII+PG++L GITPANI G GPIGLVSKSGTLTYQMM+ELRD G
Sbjct 121 NESKGKKTRIIGPNCPGIITPGEALVGITPANIAGTGPIGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AKQEALEAAGVKVGKTPSATAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKQEALEAAGVKVGKTPSATAALAREILQSL 300
>gi|108801290|ref|YP_641487.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. MCS]
gi|119870441|ref|YP_940393.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. KMS]
gi|108771709|gb|ABG10431.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
sp. MCS]
gi|119696530|gb|ABL93603.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
sp. KMS]
Length=300
Score = 503 bits (1294), Expect = 2e-140, Method: Compositional matrix adjust.
Identities = 257/297 (87%), Positives = 281/297 (95%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H DK G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSV +AM++TGADVS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVGDAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G KTRIIGPNCPGII+PG++LAGITPANITG GP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKDNVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TA LAREIL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLAREIL 297
>gi|126437271|ref|YP_001072962.1| succinyl-CoA synthetase subunit alpha [Mycobacterium sp. JLS]
gi|126237071|gb|ABO00472.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
sp. JLS]
Length=300
Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 257/297 (87%), Positives = 281/297 (95%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H DK G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQLVGGVNARKAGTTVSHVDKDGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSV EAM++TGADVS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVGEAMKETGADVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G KTRIIGPNCPGII+PG++LAGITPANITG GP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVEKGQKTRIIGPNCPGIITPGEALAGITPANITGSGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKDNVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TA LAREIL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAQLAREIL 297
>gi|254823467|ref|ZP_05228468.1| succinyl-CoA synthetase subunit alpha [Mycobacterium intracellulare
ATCC 13950]
Length=300
Score = 502 bits (1293), Expect = 3e-140, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 285/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA M++AGTQ+VGGVNARKAGTTV+H D GR ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMMKAGTQVVGGVNARKAGTTVSHVDPVGRDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEAM++TGA+VS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVAEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDPVIGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILQNL 300
>gi|342860561|ref|ZP_08717212.1| succinyl-CoA synthetase subunit alpha [Mycobacterium colombiense
CECT 3035]
gi|342132216|gb|EGT85457.1| succinyl-CoA synthetase subunit alpha [Mycobacterium colombiense
CECT 3035]
Length=300
Score = 501 bits (1289), Expect = 7e-140, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 284/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H D G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEAM++TGA+VS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVAEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDPVIGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TA LAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAELAREILQSL 300
>gi|120405819|ref|YP_955648.1| succinyl-CoA synthetase subunit alpha [Mycobacterium vanbaalenii
PYR-1]
gi|119958637|gb|ABM15642.1| succinyl-CoA synthetase (ADP-forming) alpha subunit [Mycobacterium
vanbaalenii PYR-1]
Length=300
Score = 500 bits (1287), Expect = 1e-139, Method: Compositional matrix adjust.
Identities = 259/300 (87%), Positives = 278/300 (93%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HT ML+AGTQIVGGVNARKAGTTV HEDK G ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTKLMLKAGTQIVGGVNARKAGTTVKHEDKDGNEVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF SVAEAM++TGADVSI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFASVAEAMKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG+SL GITP NITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGESLVGITPNNITGKGPIGLVSKSGTLTYQMMYELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKIIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TA LAREIL L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLAREILAGL 300
>gi|118469852|ref|YP_889761.1| succinyl-CoA synthetase subunit alpha [Mycobacterium smegmatis
str. MC2 155]
gi|118171139|gb|ABK72035.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium smegmatis
str. MC2 155]
Length=300
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 258/300 (86%), Positives = 281/300 (94%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQIVGGVNARKAGTTV+H+DK G I+L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQIVGGVNARKAGTTVSHKDKDGNDIEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEA+++TGADVSI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY
Sbjct 61 PVFGSVAEAIKETGADVSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++L GITP NITG GPIGLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TA LAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAKLAREILQSL 300
>gi|296140991|ref|YP_003648234.1| succinyl-CoA synthetase subunit alpha [Tsukamurella paurometabola
DSM 20162]
gi|296029125|gb|ADG79895.1| succinyl-CoA synthetase, alpha subunit [Tsukamurella paurometabola
DSM 20162]
Length=300
Score = 498 bits (1283), Expect = 4e-139, Method: Compositional matrix adjust.
Identities = 255/300 (85%), Positives = 279/300 (93%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
M+IFL++DNKVIVQGITG E T HTA ML+AGT +VGGVNARKAGTTV+H DK G ++L
Sbjct 1 MAIFLTKDNKVIVQGITGGEGTKHTALMLKAGTNVVGGVNARKAGTTVSHTDKDGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSVAEA+EKTGAD SI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGSVAEAIEKTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++L GITP NITG GP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALVGITPNNITGTGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPNTKVIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILQSL 300
>gi|296169712|ref|ZP_06851329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895609|gb|EFG75306.1| succinyl-CoA synthetase subunit alpha [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=300
Score = 498 bits (1281), Expect = 6e-139, Method: Compositional matrix adjust.
Identities = 254/300 (85%), Positives = 284/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H D G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEAM++TGA+VS+ FVPP FAKDA+IEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVAEAMKETGANVSVGFVPPKFAKDAMIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDPVIGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTSIGIGGDPVIGTTHIDAIEAFEKDPDTKVIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGV+VGKTPS TAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVRVGKTPSETAALAREILQSL 300
>gi|326383704|ref|ZP_08205389.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis
NRRL B-59395]
gi|326197468|gb|EGD54657.1| succinyl-CoA synthetase subunit alpha [Gordonia neofelifaecis
NRRL B-59395]
Length=300
Score = 493 bits (1268), Expect = 2e-137, Method: Compositional matrix adjust.
Identities = 254/300 (85%), Positives = 276/300 (92%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSI+L+++NKVIVQGITG E T HTA ML+AGT +VGGVNARKAGTTV+H D G ++L
Sbjct 1 MSIYLNKNNKVIVQGITGGEGTKHTALMLKAGTNVVGGVNARKAGTTVSHVDADGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF SVAEAME TGAD SI FVPP F+KDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFASVAEAMESTGADTSIAFVPPAFSKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N+E G KTRIIGPNCPGII+PG++L GITP NITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 121 NVEKGAKTRIIGPNCPGIITPGEALVGITPNNITGKGPIGLVSKSGTLTYQMMYELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAIEAFE+DP+TKLIVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIEAFEKDPETKLIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALARE+ +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALARELFDAL 300
>gi|289442368|ref|ZP_06432112.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46]
gi|289415287|gb|EFD12527.1| succinyl-CoA ligase [Mycobacterium tuberculosis T46]
Length=244
Score = 491 bits (1263), Expect = 7e-137, Method: Compositional matrix adjust.
Identities = 243/244 (99%), Positives = 244/244 (100%), Gaps = 0/244 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
DLGFSTAIGIGGDPVIGTTHIDAIEAFE+DPDTKLIVMIGEIGGDAEERAADFIKTNVSK
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFEKDPDTKLIVMIGEIGGDAEERAADFIKTNVSK 240
Query 241 PVVG 244
PVVG
Sbjct 241 PVVG 244
>gi|323357165|ref|YP_004223561.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum
StLB037]
gi|323273536|dbj|BAJ73681.1| succinyl-CoA synthetase, alpha subunit [Microbacterium testaceum
StLB037]
Length=300
Score = 486 bits (1250), Expect = 3e-135, Method: Compositional matrix adjust.
Identities = 242/300 (81%), Positives = 267/300 (89%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSI+L++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTVTH+D G ++L
Sbjct 1 MSIYLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVTHKDASGNDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF SV EAM +TGADVSI FVPP F KDA++EAIDAEIPLLVVITEG+PV DTA AWAY
Sbjct 61 PVFASVEEAMRETGADVSIAFVPPAFTKDAMVEAIDAEIPLLVVITEGVPVGDTAEAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
G KTRIIGPNCPGII+PG++L GITPANITG GPIGLVSKSGTLTYQMMFELRDLG
Sbjct 121 AKSKGEKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMFELRDLG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDA+ AFE DP+TK IVMIGEIGGDAEERAA +I NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAAAYIAENVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS TA+L REI+ +L
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLMREIIEAL 300
>gi|296393908|ref|YP_003658792.1| succinyl-CoA synthetase subunit alpha [Segniliparus rotundus
DSM 44985]
gi|296181055|gb|ADG97961.1| succinyl-CoA synthetase, alpha subunit [Segniliparus rotundus
DSM 44985]
Length=301
Score = 481 bits (1238), Expect = 6e-134, Method: Compositional matrix adjust.
Identities = 237/297 (80%), Positives = 267/297 (90%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSI+L++D+KVIVQGITG E T HTA ML+AGT +VGGVNA+KAG+TV+H+DKGG ++L
Sbjct 1 MSIYLNKDSKVIVQGITGGEGTKHTALMLKAGTNVVGGVNAKKAGSTVSHKDKGGNDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA EKTGADVSI+FVPP F K AI+EAIDAEIPLLVVITEG+PV DT A+A+
Sbjct 61 PVFGTVAEAKEKTGADVSIVFVPPAFTKSAIVEAIDAEIPLLVVITEGVPVHDTVAAFAH 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N G KTR+IGPNCPGII+PG+SL GITPANI G GP+GLVSKSGTLTYQMMFELRD G
Sbjct 121 NKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMFELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDAI+AF+ DP T++IVMIGEIGGDAEERAA +IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTTHIDAIKAFQEDPATEIIVMIGEIGGDAEERAAAYIKENVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
YVAGFTAPEGKTMGHAGAIVSGS+GTAAAK+ ALEA GVKVGKTPS TAALAREIL
Sbjct 241 AYVAGFTAPEGKTMGHAGAIVSGSAGTAAAKKVALEAVGVKVGKTPSGTAALAREIL 297
>gi|184201463|ref|YP_001855670.1| succinyl-CoA synthetase subunit alpha [Kocuria rhizophila DC2201]
gi|183581693|dbj|BAG30164.1| succinyl-CoA synthetase alpha chain [Kocuria rhizophila DC2201]
Length=305
Score = 479 bits (1234), Expect = 2e-133, Method: Compositional matrix adjust.
Identities = 239/302 (80%), Positives = 269/302 (90%), Gaps = 5/302 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTARML AGTQ++GGVNARKAGTTV+H+DK G ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTARMLAAGTQVMGGVNARKAGTTVSHQDKDGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PV+GSV+EAM++TGA+ SI+FVPP F KDA+IEAIDAEIPL+VVITEGIPVQD+A WA+
Sbjct 61 PVYGSVSEAMKETGANASIVFVPPAFCKDAVIEAIDAEIPLVVVITEGIPVQDSAEFWAH 120
Query 124 N-----LEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE 178
+ + KTRIIGPNCPGIISP +SL GITPANITG G +GLVSKSGTLTYQMM+E
Sbjct 121 SQANTGADGKPKTRIIGPNCPGIISPEESLLGITPANITGKGKLGLVSKSGTLTYQMMYE 180
Query 179 LRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV 238
LRDLGF+TAIGIGGDPVIGTTHIDA+EAFE DP+T+ IVMIGEIGGDAEERAADFIK NV
Sbjct 181 LRDLGFTTAIGIGGDPVIGTTHIDALEAFEADPETEAIVMIGEIGGDAEERAADFIKANV 240
Query 239 SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
+KPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTA AK+EALEAAGVKVGKTPS TA L RE
Sbjct 241 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAQAKKEALEAAGVKVGKTPSETAQLMRE 300
Query 299 IL 300
I
Sbjct 301 IF 302
>gi|41406995|ref|NP_959831.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395346|gb|AAS03214.1| SucD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336461429|gb|EGO40300.1| succinyl-CoA synthetase, alpha subunit [Mycobacterium avium subsp.
paratuberculosis S397]
Length=300
Score = 478 bits (1230), Expect = 6e-133, Method: Compositional matrix adjust.
Identities = 254/300 (85%), Positives = 285/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H D G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+V+EAM++TGA+VS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDP+IGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILQSL 300
>gi|254773955|ref|ZP_05215471.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium subsp.
avium ATCC 25291]
Length=300
Score = 476 bits (1224), Expect = 2e-132, Method: Compositional matrix adjust.
Identities = 253/300 (85%), Positives = 284/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H D G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+V+EAM++TGA+VS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G K RIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKARIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDP+IGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK NVSKPVV
Sbjct 181 FSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKANVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILQSL 300
>gi|118462581|ref|YP_880329.1| succinyl-CoA synthetase subunit alpha [Mycobacterium avium 104]
gi|118163868|gb|ABK64765.1| succinyl-CoA synthetase alpha chain [Mycobacterium avium 104]
Length=300
Score = 476 bits (1224), Expect = 3e-132, Method: Compositional matrix adjust.
Identities = 253/300 (85%), Positives = 285/300 (95%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNARKAGTTV+H D G+ ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVSHVDPVGKDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+V+EAM++TGA+VS++FVPP FAKDAIIEAIDAEIPLLVVITEGIPVQD+AYAWAY
Sbjct 61 PVFGTVSEAMKETGANVSVVFVPPKFAKDAIIEAIDAEIPLLVVITEGIPVQDSAYAWAY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N++ G KTRIIGPNCPGII+PG++LAGITPANI+GPGP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NVDKGQKTRIIGPNCPGIITPGEALAGITPANISGPGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST+IGIGGDP+IGTTHIDAIEAFE+DPDTK+IVMIGEIGGDAEERAAD+IK +VSKPVV
Sbjct 181 FSTSIGIGGDPIIGTTHIDAIEAFEKDPDTKIIVMIGEIGGDAEERAADYIKAHVSKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAK+EALEAAGVKVGKTPS TAALAREIL SL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPSETAALAREILQSL 300
>gi|319947697|ref|ZP_08021911.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4]
gi|319438647|gb|EFV93553.1| succinyl-CoA synthetase subunit alpha [Dietzia cinnamea P4]
Length=300
Score = 468 bits (1204), Expect = 6e-130, Method: Compositional matrix adjust.
Identities = 244/300 (82%), Positives = 268/300 (90%), Gaps = 0/300 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTARML AGTQIVGGVNARKAGTTV+H+D+ G I+L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTARMLAAGTQIVGGVNARKAGTTVSHKDRDGNDIEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFGSV EAME TGAD +I+FVPP F KDAIIEA+DAEIPL VVITEG PV DTA AW Y
Sbjct 61 PVFGSVKEAMEATGADTTILFVPPPFTKDAIIEAVDAEIPLAVVITEGAPVLDTATAWNY 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
NL G KTRIIGPNCPGII+PG+SL GITPANI G GP+GLVSKSGTLTYQMM+EL D G
Sbjct 121 NLAKGGKTRIIGPNCPGIITPGESLVGITPANIAGKGPVGLVSKSGTLTYQMMYELADYG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDP+IGTTHID IEAFE DP+TK+IVMIGEIGGDAEERAAD+IK NV+KPVV
Sbjct 181 FSTAIGIGGDPIIGTTHIDCIEAFENDPETKVIVMIGEIGGDAEERAADYIKANVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS TA LA+EIL ++
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAQLAKEILDAM 300
>gi|295396403|ref|ZP_06806565.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri
ATCC 49030]
gi|294970705|gb|EFG46618.1| succinyl-CoA synthetase subunit alpha [Brevibacterium mcbrellneri
ATCC 49030]
Length=299
Score = 465 bits (1196), Expect = 4e-129, Method: Compositional matrix adjust.
Identities = 234/297 (79%), Positives = 260/297 (88%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL+ ++KVIVQGITG E T HTARML AGT++VGGVNARKAGT V+H+DK G ++L
Sbjct 1 MSIFLNSESKVIVQGITGGEGTKHTARMLAAGTKVVGGVNARKAGTKVSHKDKDGNDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVF SV EAM++TGADVS+ FVPP F+KDA EAIDA I LLV+ITEGIPVQD+A WA+
Sbjct 61 PVFASVEEAMKETGADVSVAFVPPAFSKDAAFEAIDAGIGLLVIITEGIPVQDSAEIWAH 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
G+KTRIIGPNCPGIISP QSLAGI PANIT G IGLVSKSGTLTYQ+M+ELRD+G
Sbjct 121 ATAKGNKTRIIGPNCPGIISPEQSLAGIIPANITKRGKIGLVSKSGTLTYQLMYELRDIG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FST IGIGGDPVIGTTHIDAI AF+ DPDT+ IVMIGEIGGDAEERAA+FIK NV+KPVV
Sbjct 181 FSTCIGIGGDPVIGTTHIDAIAAFQEDPDTEAIVMIGEIGGDAEERAAEFIKENVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
GYVAGFTAPEGKTMGHAGAIVSGSSGTA AK++ALEAAGVKVGKTPS TA L REIL
Sbjct 241 GYVAGFTAPEGKTMGHAGAIVSGSSGTAEAKKKALEAAGVKVGKTPSETANLMREIL 297
>gi|163839117|ref|YP_001623522.1| succinyl-CoA synthetase subunit alpha [Renibacterium salmoninarum
ATCC 33209]
gi|162952593|gb|ABY22108.1| succinyl-CoA synthetase alpha chain [Renibacterium salmoninarum
ATCC 33209]
Length=305
Score = 464 bits (1195), Expect = 6e-129, Method: Compositional matrix adjust.
Identities = 232/305 (77%), Positives = 263/305 (87%), Gaps = 5/305 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSI+L++D+KVIVQGITG E T HTA +L+AGTQ+VGGVNARKAGTTV+H D G ++L
Sbjct 1 MSIYLNKDSKVIVQGITGGEGTKHTALILKAGTQVVGGVNARKAGTTVSHTDAAGNAVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG V EA+EKTGADVSIIFVPP F KDA++EAI+A I L+V+ITEG+PVQD+A WA
Sbjct 61 PVFGGVTEAIEKTGADVSIIFVPPAFTKDAVVEAIEAGIGLVVIITEGVPVQDSAEFWAL 120
Query 124 -----NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFE 178
+ + TRIIGPNCPGII+PG+SL GITP NIT GPIGLVSKSGTLTYQMM+E
Sbjct 121 AQSKVDADGKQVTRIIGPNCPGIITPGESLVGITPNNITSKGPIGLVSKSGTLTYQMMYE 180
Query 179 LRDLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNV 238
LRDLGFSTAIGIGGDPVIGTTHIDA+ AFE DP+TK IVMIGEIGGDAEERAADFIK NV
Sbjct 181 LRDLGFSTAIGIGGDPVIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIKANV 240
Query 239 SKPVVGYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALARE 298
+KPVVGYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS +A L RE
Sbjct 241 TKPVVGYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSESAKLLRE 300
Query 299 ILLSL 303
+ +L
Sbjct 301 VFAAL 305
>gi|325001242|ref|ZP_08122354.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia sp. P1]
Length=295
Score = 461 bits (1185), Expect = 7e-128, Method: Compositional matrix adjust.
Identities = 233/297 (79%), Positives = 259/297 (88%), Gaps = 5/297 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL+ ++KVIVQGITG E T H +M+ +GT IVGGVNARKAGTT T DK +
Sbjct 1 MSIFLNENSKVIVQGITGGEGTKHATKMIASGTNIVGGVNARKAGTTHTVGDK-----DV 55
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
V+G+V EAM++TGADVS++FVPP FAKDA+IEAIDAEIPL VVITEGIPV D+AY WA+
Sbjct 56 TVYGTVEEAMKETGADVSVLFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAH 115
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
+ G+KTRIIGPNCPGIISPG+S AGI PANI GPG IGLVSKSGTLTYQMMFELR+ G
Sbjct 116 AVAKGNKTRIIGPNCPGIISPGKSNAGIIPANIAGPGKIGLVSKSGTLTYQMMFELREFG 175
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDA+EAFE DPDT+ IVMIGEIGGDAEERAADFIK NV+KPV
Sbjct 176 FSTAIGIGGDPVIGTTHIDALEAFEADPDTEAIVMIGEIGGDAEERAADFIKANVTKPVA 235
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS TAAL +EIL
Sbjct 236 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMKEIL 292
>gi|88855830|ref|ZP_01130493.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium
PHSC20C1]
gi|88815154|gb|EAR25013.1| succinyl-CoA synthetase alpha subunit [marine actinobacterium
PHSC20C1]
Length=295
Score = 460 bits (1184), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 242/300 (81%), Positives = 268/300 (90%), Gaps = 5/300 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML AGTQ+VGGVNARKAGTTV H D ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLAAGTQVVGGVNARKAGTTVLHGD-----VEL 55
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEAMEKTGADVSI FVPP F K+A++EAIDAEIPLLV+ITEG+PV D+A WAY
Sbjct 56 PVFGTVAEAMEKTGADVSIAFVPPAFTKNAVVEAIDAEIPLLVIITEGVPVGDSAEFWAY 115
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
E G+KTRIIGPNCPGII+PG++L GITPANITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 116 AQEKGNKTRIIGPNCPGIITPGEALVGITPANITGKGPIGLVSKSGTLTYQMMYELRDLG 175
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDP+IGTTHIDA+EAFE DP+TK IVMIGEIGGDAEERAAD+IK +V+KPVV
Sbjct 176 FSTAIGIGGDPIIGTTHIDALEAFEADPETKAIVMIGEIGGDAEERAADYIKAHVTKPVV 235
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AKQEALEAAGVKVGKTPS A L REIL +L
Sbjct 236 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKQEALEAAGVKVGKTPSEAAKLMREILATL 295
>gi|50955503|ref|YP_062791.1| succinyl-CoA synthetase subunit alpha [Leifsonia xyli subsp.
xyli str. CTCB07]
gi|50951985|gb|AAT89686.1| succinyl-CoA synthetase, alpha chain [Leifsonia xyli subsp. xyli
str. CTCB07]
Length=295
Score = 460 bits (1183), Expect = 1e-127, Method: Compositional matrix adjust.
Identities = 241/300 (81%), Positives = 268/300 (90%), Gaps = 5/300 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL++D+KVIVQGITG E T HTA ML+AGT +VGGVNARKAGT+VTH D ++L
Sbjct 1 MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTTVVGGVNARKAGTSVTHGD-----VEL 55
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+V EA+EKTGADVSI+FVPP FAKDA++EAIDAEIPLLVVITEGIPVQD A WAY
Sbjct 56 PVFGTVVEAIEKTGADVSIVFVPPAFAKDAMVEAIDAEIPLLVVITEGIPVQDAAEVWAY 115
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
E G+KTRIIGPNCPG+I PG+SL GITPA ITG GPIGLVSKSGTLTYQMM+ELRDLG
Sbjct 116 AKEKGNKTRIIGPNCPGVIIPGESLVGITPATITGKGPIGLVSKSGTLTYQMMYELRDLG 175
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDP+IGTTHIDA+ AFE DP+T+ IVMIGEIGGDAEERAADFIK NV+KPVV
Sbjct 176 FSTAIGIGGDPIIGTTHIDALAAFEADPETRAIVMIGEIGGDAEERAADFIKANVTKPVV 235
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS TA+L RE+ +L
Sbjct 236 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETASLLREVYAAL 295
>gi|331699079|ref|YP_004335318.1| succinyl-CoA synthetase subunit alpha [Pseudonocardia dioxanivorans
CB1190]
gi|326953768|gb|AEA27465.1| succinyl-CoA synthetase, alpha subunit [Pseudonocardia dioxanivorans
CB1190]
Length=295
Score = 458 bits (1178), Expect = 5e-127, Method: Compositional matrix adjust.
Identities = 235/300 (79%), Positives = 262/300 (88%), Gaps = 5/300 (1%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSIFL+ ++KVIVQGITG E T H +ML AGT IVGGVNARKAGTTVT GG+ L
Sbjct 1 MSIFLNENSKVIVQGITGGEGTKHATKMLAAGTNIVGGVNARKAGTTVT---IGGK--DL 55
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
VFG+V EA+++TGADVS++FVPP FAKDA+IEAIDAEIPL VVITEGIPV D+AY WA+
Sbjct 56 TVFGTVEEAIKETGADVSVVFVPPKFAKDAVIEAIDAEIPLAVVITEGIPVHDSAYFWAH 115
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
+ G+KTRIIGPNCPGIISPG+S AGI PA+I GPG IGLVSKSGTLTYQMM+ELR++G
Sbjct 116 AVAKGNKTRIIGPNCPGIISPGKSNAGIIPADIAGPGKIGLVSKSGTLTYQMMYELREIG 175
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGTTHIDA+EAFE DP+T IVMIGEIGGDAEERAA FI+ NVSKPVV
Sbjct 176 FSTAIGIGGDPVIGTTHIDALEAFEADPETAAIVMIGEIGGDAEERAAAFIQANVSKPVV 235
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREILLSL 303
GYVAGFTAPEGKTMGHAGAIVSGS+GTA AK+EALEAAGVKVGKTPS TAAL REI+ L
Sbjct 236 GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETAALMREIIAGL 295
>gi|317508745|ref|ZP_07966397.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
gi|316252960|gb|EFV12378.1| succinate-CoA ligase [Segniliparus rugosus ATCC BAA-974]
Length=301
Score = 457 bits (1177), Expect = 8e-127, Method: Compositional matrix adjust.
Identities = 234/297 (79%), Positives = 264/297 (89%), Gaps = 0/297 (0%)
Query 4 MSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRLIKL 63
MSI+L++D+KVIVQGITG E T HTA ML+AGTQ+VGGVNA+KAGTTV H+ K G ++L
Sbjct 1 MSIYLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNAKKAGTTVAHKGKDGNDVEL 60
Query 64 PVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYAWAY 123
PVFG+VAEA+EKTGADVSI FVPP F K A+IEAI+AEIPLLVVITEG+PV DT A+A+
Sbjct 61 PVFGTVAEAIEKTGADVSIAFVPPAFTKSAMIEAIEAEIPLLVVITEGVPVHDTVAAFAH 120
Query 124 NLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELRDLG 183
N G KTR+IGPNCPGII+PG+SL GITPANI G GP+GLVSKSGTLTYQMM+ELRD G
Sbjct 121 NKAKGSKTRVIGPNCPGIITPGESLVGITPANIAGSGPVGLVSKSGTLTYQMMYELRDFG 180
Query 184 FSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDAEERAADFIKTNVSKPVV 243
FSTAIGIGGDPVIGT+HIDAI+AF+ DP T+LIVMIGEIGGDAEERAA +IK NV+KPVV
Sbjct 181 FSTAIGIGGDPVIGTSHIDAIKAFQEDPATELIVMIGEIGGDAEERAAAYIKENVTKPVV 240
Query 244 GYVAGFTAPEGKTMGHAGAIVSGSSGTAAAKQEALEAAGVKVGKTPSATAALAREIL 300
YVAGFTAPEGKTMGHAGAIVSGS+GTA AK+ ALEA GVKVGKTPS TAALAREIL
Sbjct 241 AYVAGFTAPEGKTMGHAGAIVSGSAGTAEAKKAALEAVGVKVGKTPSGTAALAREIL 297
>gi|326904828|gb|EGE51761.1| LOW QUALITY PROTEIN: succinyl-CoA synthetase subunit alpha sucD
[Mycobacterium tuberculosis W-148]
Length=226
Score = 456 bits (1172), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL
Sbjct 1 MTHMSIFLSRDNKVIVQGITGSEATVHTARMLRAGTQIVGGVNARKAGTTVTHEDKGGRL 60
Query 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA
Sbjct 61 IKLPVFGSVAEAMEKTGADVSIIFVPPTFAKDAIIEAIDAEIPLLVVITEGIPVQDTAYA 120
Query 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR
Sbjct 121 WAYNLEAGHKTRIIGPNCPGIISPGQSLAGITPANITGPGPIGLVSKSGTLTYQMMFELR 180
Query 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDA 226
DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDA
Sbjct 181 DLGFSTAIGIGGDPVIGTTHIDAIEAFERDPDTKLIVMIGEIGGDA 226
Lambda K H
0.316 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 508884486504
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40