BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0954
Length=303
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608094|ref|NP_215469.1| transmembrane protein [Mycobacteriu... 570 7e-161
gi|289442370|ref|ZP_06432114.1| conserved membrane protein [Myco... 568 3e-160
gi|15840378|ref|NP_335415.1| antigen 34 kDa [Mycobacterium tuber... 568 4e-160
gi|289744685|ref|ZP_06504063.1| conserved hypothetical protein [... 567 5e-160
gi|306796733|ref|ZP_07435035.1| hypothetical protein TMFG_02766 ... 567 7e-160
gi|297730461|ref|ZP_06959579.1| antigen 34 kDa [Mycobacterium tu... 499 2e-139
gi|340625967|ref|YP_004744419.1| hypothetical protein MCAN_09581... 402 3e-110
gi|306775084|ref|ZP_07413421.1| hypothetical protein TMAG_00889 ... 369 3e-100
gi|118619786|ref|YP_908118.1| transmembrane protein [Mycobacteri... 303 2e-80
gi|183984515|ref|YP_001852806.1| transmembrane protein [Mycobact... 296 2e-78
gi|240169368|ref|ZP_04748027.1| transmembrane protein [Mycobacte... 240 2e-61
gi|15826980|ref|NP_301243.1| 34 kDa antigen [Mycobacterium lepra... 221 9e-56
gi|4455693|emb|CAB36668.1| hypothetical membrane protein MLCB373... 221 1e-55
gi|3647207|gb|AAC69251.1| 34 kDa antigen precursor [Mycobacteriu... 220 2e-55
gi|342860564|ref|ZP_08717215.1| 34 kDa antigenic protein [Mycoba... 214 2e-53
gi|296169715|ref|ZP_06851332.1| antigenic protein [Mycobacterium... 207 2e-51
gi|254773958|ref|ZP_05215474.1| hypothetical protein MaviaA2_046... 195 7e-48
gi|118464677|ref|YP_880332.1| 34 kDa antigenic protein [Mycobact... 194 2e-47
gi|336461426|gb|EGO40297.1| hypothetical protein MAPs_31670 [Myc... 193 2e-47
gi|254823464|ref|ZP_05228465.1| hypothetical protein MintA_26276... 192 4e-47
gi|126211547|gb|ABN80440.1| 29.6 kDa protein [Mycobacterium aviu... 166 4e-39
gi|41406998|ref|NP_959834.1| hypothetical protein MAP0900 [Mycob... 166 4e-39
gi|333989541|ref|YP_004522155.1| transmembrane protein [Mycobact... 144 2e-32
gi|108801286|ref|YP_641483.1| hypothetical protein Mmcs_4322 [My... 127 2e-27
gi|315442907|ref|YP_004075786.1| hypothetical protein Mspyr1_127... 108 8e-22
gi|145222462|ref|YP_001133140.1| hypothetical protein Mflv_1872 ... 108 8e-22
gi|120405809|ref|YP_955638.1| hypothetical protein Mvan_4859 [My... 103 4e-20
gi|226307913|ref|YP_002767873.1| hypothetical protein RER_44260 ... 78.6 1e-12
gi|169628156|ref|YP_001701805.1| 34 kDa antigenic protein [Mycob... 72.4 9e-11
gi|229495104|ref|ZP_04388850.1| antigen 34 kDa [Rhodococcus eryt... 69.7 6e-10
gi|118470898|ref|YP_889755.1| antigen 34 kDa [Mycobacterium smeg... 63.2 4e-08
gi|331699078|ref|YP_004335317.1| antigen 34 kDa family protein [... 40.8 0.29
gi|111022542|ref|YP_705514.1| 34 kDa antigenic protein [Rhodococ... 40.0 0.48
>gi|15608094|ref|NP_215469.1| transmembrane protein [Mycobacterium tuberculosis H37Rv]
gi|31792143|ref|NP_854636.1| transmembrane protein [Mycobacterium bovis AF2122/97]
gi|121636879|ref|YP_977102.1| putative transmembrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
57 more sequence titles
Length=303
Score = 570 bits (1470), Expect = 7e-161, Method: Compositional matrix adjust.
Identities = 303/303 (100%), Positives = 303/303 (100%), Gaps = 0/303 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
Query 301 APV 303
APV
Sbjct 301 APV 303
>gi|289442370|ref|ZP_06432114.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568927|ref|ZP_06449154.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289749478|ref|ZP_06508856.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289415289|gb|EFD12529.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289542681|gb|EFD46329.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289690065|gb|EFD57494.1| conserved membrane protein [Mycobacterium tuberculosis T92]
Length=303
Score = 568 bits (1465), Expect = 3e-160, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 302/303 (99%), Gaps = 0/303 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSP PQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPSPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
Query 301 APV 303
APV
Sbjct 301 APV 303
>gi|15840378|ref|NP_335415.1| antigen 34 kDa [Mycobacterium tuberculosis CDC1551]
gi|13880545|gb|AAK45229.1| antigen 34 kDa [Mycobacterium tuberculosis CDC1551]
Length=303
Score = 568 bits (1464), Expect = 4e-160, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 302/303 (99%), Gaps = 0/303 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYS GNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSXGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
Query 301 APV 303
APV
Sbjct 301 APV 303
>gi|289744685|ref|ZP_06504063.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289685213|gb|EFD52701.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
Length=303
Score = 567 bits (1462), Expect = 5e-160, Method: Compositional matrix adjust.
Identities = 302/303 (99%), Positives = 302/303 (99%), Gaps = 0/303 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGG SSSPSQSGSGYTAQPPA
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGDSSSPSQSGSGYTAQPPA 240
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
Query 301 APV 303
APV
Sbjct 301 APV 303
>gi|306796733|ref|ZP_07435035.1| hypothetical protein TMFG_02766 [Mycobacterium tuberculosis SUMu006]
gi|306806800|ref|ZP_07443468.1| hypothetical protein TMGG_03021 [Mycobacterium tuberculosis SUMu007]
gi|307083476|ref|ZP_07492589.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|308342892|gb|EFP31743.1| hypothetical protein TMFG_02766 [Mycobacterium tuberculosis SUMu006]
gi|308346810|gb|EFP35661.1| hypothetical protein TMGG_03021 [Mycobacterium tuberculosis SUMu007]
gi|308366891|gb|EFP55742.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
Length=317
Score = 567 bits (1461), Expect = 7e-160, Method: Compositional matrix adjust.
Identities = 300/300 (100%), Positives = 300/300 (100%), Gaps = 0/300 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
>gi|297730461|ref|ZP_06959579.1| antigen 34 kDa [Mycobacterium tuberculosis KZN R506]
gi|339297598|gb|AEJ49708.1| hypothetical protein CCDC5180_0871 [Mycobacterium tuberculosis
CCDC5180]
Length=266
Score = 499 bits (1285), Expect = 2e-139, Method: Compositional matrix adjust.
Identities = 266/266 (100%), Positives = 266/266 (100%), Gaps = 0/266 (0%)
Query 38 MYLNIAVAVLGLAAYFASFGPMFTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVP 97
MYLNIAVAVLGLAAYFASFGPMFTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVP
Sbjct 1 MYLNIAVAVLGLAAYFASFGPMFTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVP 60
Query 98 KAKSHVTVVAVLGVLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETG 157
KAKSHVTVVAVLGVLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETG
Sbjct 61 KAKSHVTVVAVLGVLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETG 120
Query 158 AITAPAPRPKFDPYGQYGRYGQYGQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYG 217
AITAPAPRPKFDPYGQYGRYGQYGQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYG
Sbjct 121 AITAPAPRPKFDPYGQYGRYGQYGQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYG 180
Query 218 SQYGGYSSSPSQSGSGYTAQPPAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGS 277
SQYGGYSSSPSQSGSGYTAQPPAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGS
Sbjct 181 SQYGGYSSSPSQSGSGYTAQPPAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGS 240
Query 278 QAGSAPVNYSNPSGGEQSSSPGGAPV 303
QAGSAPVNYSNPSGGEQSSSPGGAPV
Sbjct 241 QAGSAPVNYSNPSGGEQSSSPGGAPV 266
>gi|340625967|ref|YP_004744419.1| hypothetical protein MCAN_09581 [Mycobacterium canettii CIPT
140010059]
gi|340004157|emb|CCC43295.1| putative conserved transmembrane protein [Mycobacterium canettii
CIPT 140010059]
Length=299
Score = 402 bits (1033), Expect = 3e-110, Method: Compositional matrix adjust.
Identities = 298/303 (99%), Positives = 298/303 (99%), Gaps = 4/303 (1%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQ AGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYT A
Sbjct 181 GQYGVQPGGYYGQQGAQQPAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYT----A 236
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 237 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 296
Query 301 APV 303
APV
Sbjct 297 APV 299
>gi|306775084|ref|ZP_07413421.1| hypothetical protein TMAG_00889 [Mycobacterium tuberculosis SUMu001]
gi|306971191|ref|ZP_07483852.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307078918|ref|ZP_07488088.1| hypothetical protein TMKG_03666 [Mycobacterium tuberculosis SUMu011]
gi|308216431|gb|EFO75830.1| hypothetical protein TMAG_00889 [Mycobacterium tuberculosis SUMu001]
gi|308359327|gb|EFP48178.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308363234|gb|EFP52085.1| hypothetical protein TMKG_03666 [Mycobacterium tuberculosis SUMu011]
Length=313
Score = 369 bits (948), Expect = 3e-100, Method: Compositional matrix adjust.
Identities = 296/300 (99%), Positives = 296/300 (99%), Gaps = 4/300 (1%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF
Sbjct 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA
Sbjct 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY
Sbjct 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYT A
Sbjct 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYT----A 236
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 300
QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG
Sbjct 237 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQSSSPGG 296
>gi|118619786|ref|YP_908118.1| transmembrane protein [Mycobacterium ulcerans Agy99]
gi|118571896|gb|ABL06647.1| conserved transmembrane protein [Mycobacterium ulcerans Agy99]
Length=301
Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 213/312 (69%), Positives = 241/312 (78%), Gaps = 20/312 (6%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTY+PG+PGYP AQ GSYGG TPSFA AD+ ASKLPMYLN+AVAVLG AY ASFGPMF
Sbjct 1 MTYTPGSPGYPPAQSGGSYGGATPSFAQADDAASKLPMYLNVAVAVLGFLAYLASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+S+ELGGG SGDT L VG+ALLA LLAGV+L+PK KS+ VVAV+ +LGVFLM+S+
Sbjct 61 TISSELGGGSSEASGDTVLAVGMALLAGLLAGVSLLPKVKSYGAVVAVVSILGVFLMISS 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSA+STGWALW+VL IVFQAVAAV ALL+ETG ++APAPRPKFDPYGQYG+YGQY
Sbjct 121 TFNKPSAFSTGWALWIVLVCIVFQAVAAVGALLLETGVVSAPAPRPKFDPYGQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSS--PSQSGSGYTAQP 238
G YYGQ GAQQ+A Q QP GYGSQYGG++SS + S G++A
Sbjct 181 GGQPGG---YYGQPGAQQSAPNPQ---QSPQQPSGYGSQYGGFTSSQGSNPSSGGFSA-- 232
Query 239 PAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSG------- 291
P AQS Q HQ PSTPPTGFPSFSPPP VSAGTGSQ GSAPVNY+NPSG
Sbjct 233 ---PQAQSAPQPMHQTPSTPPTGFPSFSPPPSVSAGTGSQGGSAPVNYANPSGAQQNYGQ 289
Query 292 GEQSSSPGGAPV 303
G+QSSSPG APV
Sbjct 290 GQQSSSPGSAPV 301
>gi|183984515|ref|YP_001852806.1| transmembrane protein [Mycobacterium marinum M]
gi|183177841|gb|ACC42951.1| conserved transmembrane protein [Mycobacterium marinum M]
Length=304
Score = 296 bits (758), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 218/312 (70%), Positives = 245/312 (79%), Gaps = 17/312 (5%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTY+PG+PGYP AQ GSYGG TPSFA AD+ ASKLPMYLN+AVAVLG AY ASFGPMF
Sbjct 1 MTYTPGSPGYPPAQSGGSYGGATPSFAQADDAASKLPMYLNVAVAVLGFLAYLASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+S+ELGGG SGDT L VG+ALLA LLAGV+L+PK KS+ VVAV+ +LGVFLM+S+
Sbjct 61 TISSELGGGSSEASGDTVLAVGMALLAGLLAGVSLLPKVKSYGAVVAVVSILGVFLMISS 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSA+STGWALW+VL IVFQAVAAV ALL+ETG ++APAPRPKFDPYGQYG+YGQY
Sbjct 121 TFNKPSAFSTGWALWIVLVCIVFQAVAAVGALLLETGVVSAPAPRPKFDPYGQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSS--PSQSGSGYTAQP 238
GQYG QPGGYYGQ GAQQ+A Q QP GYGSQYGG++SS + S G++A
Sbjct 181 GQYGGQPGGYYGQPGAQQSAPNPQ---QSPQQPSGYGSQYGGFTSSQGSNPSSGGFSA-- 235
Query 239 PAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNP-------SG 291
P AQS Q HQ PSTPPTGFPSFSPPP VSAGTGSQ GSAPVNY NP
Sbjct 236 ---PQAQSAPQPMHQTPSTPPTGFPSFSPPPSVSAGTGSQGGSAPVNYGNPGGGQQNYGQ 292
Query 292 GEQSSSPGGAPV 303
G+QSSSPG APV
Sbjct 293 GQQSSSPGSAPV 304
>gi|240169368|ref|ZP_04748027.1| transmembrane protein [Mycobacterium kansasii ATCC 12478]
Length=304
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 207/292 (71%), Positives = 229/292 (79%), Gaps = 8/292 (2%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ AGSYG TPSFA AD+G SKLPMYL++AVA LGL AY ASFGPMF
Sbjct 1 MTYSPGSPGYPPAQSAGSYGAATPSFAKADDGVSKLPMYLSMAVAALGLLAYLASFGPMF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+S+ELGG VSGDTGL VG+ALLAALLAGV+LVPKAKS+V +V+V+ LGV LM+SA
Sbjct 61 TVSSELGGAGSEVSGDTGLAVGLALLAALLAGVSLVPKAKSYVAIVSVVSALGVLLMISA 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
TFNKPSAYSTGWALWVVL FIVFQ+VAAV ALL++ G I+APAPRPKFD Y QYG+YGQY
Sbjct 121 TFNKPSAYSTGWALWVVLVFIVFQSVAAVGALLLDAGVISAPAPRPKFDAYAQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG QPGGYYGQ AQQ A +P P Q P G S + S G+ A
Sbjct 181 GQYGGQPGGYYGQPSAQQQA---APSPAQ-PSGYGSQYGGYSSSGGSNPSTGGFG----A 232
Query 241 QPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGG 292
Q P QS Q HQGPSTPPTGFPSF PPPPVSAGTGSQAGSAPVNYSNP+GG
Sbjct 233 QQPGQSAPQPMHQGPSTPPTGFPSFGPPPPVSAGTGSQAGSAPVNYSNPAGG 284
>gi|15826980|ref|NP_301243.1| 34 kDa antigen [Mycobacterium leprae TN]
gi|221229458|ref|YP_002502874.1| 34 kDa antigen [Mycobacterium leprae Br4923]
gi|13092527|emb|CAC29666.1| 34 kDa antigen [Mycobacterium leprae]
gi|219932565|emb|CAR70251.1| 34 kDa antigen [Mycobacterium leprae Br4923]
Length=314
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 168/297 (57%), Positives = 195/297 (66%), Gaps = 21/297 (7%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTY PG+PGYP QPAGSY G TPSF +D G S+L YL IAV VLGLA Y +FGP F
Sbjct 18 MTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTF 77
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T S+++G G G +GD G V VALLAALLAG+ L+PKAKS VV + VLG L +S
Sbjct 78 TSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISE 137
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
N P+ +S GWA+W +L V QA+AAV ALL+E G ITAPAPR +DP Y QY
Sbjct 138 MINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIITAPAPRLSYDP------YLQY 191
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG Q YYGQ Q GL + PQQSP GYG+QYG Y+SSP+Q +G
Sbjct 192 GQYGAQ--SYYGQPNRQLQVGLNAHSPQQSPA--GYGAQYGAYTSSPTQIQAGM------ 241
Query 241 QPPAQSGSQQSH---QGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQ 294
PA G H QGPSTPPTGFPSFSPPP V A GSQAGSAPV+YSNP+ +Q
Sbjct 242 --PATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQ 296
>gi|4455693|emb|CAB36668.1| hypothetical membrane protein MLCB373.06 [Mycobacterium leprae]
Length=297
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 168/297 (57%), Positives = 195/297 (66%), Gaps = 21/297 (7%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTY PG+PGYP QPAGSY G TPSF +D G S+L YL IAV VLGLA Y +FGP F
Sbjct 1 MTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T S+++G G G +GD G V VALLAALLAG+ L+PKAKS VV + VLG L +S
Sbjct 61 TSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
N P+ +S GWA+W +L V QA+AAV ALL+E G ITAPAPR +DP Y QY
Sbjct 121 MINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIITAPAPRLSYDP------YLQY 174
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG Q YYGQ Q GL + PQQSP GYG+QYG Y+SSP+Q +G
Sbjct 175 GQYGAQ--SYYGQPNRQLQVGLNAHSPQQSPA--GYGAQYGAYTSSPTQIQAGM------ 224
Query 241 QPPAQSGSQQSH---QGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQ 294
PA G H QGPSTPPTGFPSFSPPP V A GSQAGSAPV+YSNP+ +Q
Sbjct 225 --PATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQ 279
>gi|3647207|gb|AAC69251.1| 34 kDa antigen precursor [Mycobacterium leprae]
Length=336
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 167/297 (57%), Positives = 194/297 (66%), Gaps = 21/297 (7%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTY PG+PGYP QPAGSY G TPSF +D G S+L YL IAV VLGLA Y +FGP F
Sbjct 40 MTYLPGSPGYPLVQPAGSYPGATPSFVKSDVGESQLYHYLTIAVVVLGLAVYLGNFGPTF 99
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T S+++G G G +GD G V VALLAALLAG+ L+PKAKS VV + VLG L +S
Sbjct 100 TSSSDIGPGSGGFAGDAGTAVVVALLAALLAGLDLLPKAKSSAGVVGAIAVLGALLAISE 159
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
N P+ +S GWA+W +L V QA+AAV ALL+E G I APAPR +DP Y QY
Sbjct 160 MINMPAGFSIGWAMWFILVCSVLQAIAAVAALLLEAGIIAAPAPRLSYDP------YLQY 213
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG Q YYGQ Q GL + PQQSP GYG+QYG Y+SSP+Q +G
Sbjct 214 GQYGAQ--SYYGQPNRQLQVGLNAHSPQQSPA--GYGAQYGAYTSSPTQIQAGM------ 263
Query 241 QPPAQSGSQQSH---QGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQ 294
PA G H QGPSTPPTGFPSFSPPP V A GSQAGSAPV+YSNP+ +Q
Sbjct 264 --PATGGFSAQHSAQQGPSTPPTGFPSFSPPPSVGAAAGSQAGSAPVSYSNPTDSKQ 318
>gi|342860564|ref|ZP_08717215.1| 34 kDa antigenic protein [Mycobacterium colombiense CECT 3035]
gi|342132219|gb|EGT85460.1| 34 kDa antigenic protein [Mycobacterium colombiense CECT 3035]
Length=304
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 166/292 (57%), Positives = 200/292 (69%), Gaps = 17/292 (5%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQP G Y G TPSFA D+G SKLP YLNIAV VLGLAAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQPGGGYAGATPSFAKDDDGPSKLPFYLNIAVVVLGLAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VA+LAALLAG+ L+PK K++ +VAV+ VLG L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVAVLAALLAGLGLLPKTKNYPGIVAVIAVLGALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
T N P+ ++ GWA+W ++A +V QA+AAV+ +L+E+G ITAPAPRPK+DPY QY +YGQY
Sbjct 121 TINLPAGFAIGWAMWPLVAAVVLQAIAAVVVVLLESGVITAPAPRPKYDPYAQYNQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSS--PSQSG---SGYT 235
GQYG QP G Q QSP SQYGGYS S P+QSG G+
Sbjct 181 GQYGQQPYYGQQAGGQQHGGQQQSPQGYG--------SQYGGYSPSAAPTQSGVPTGGFG 232
Query 236 AQPPAQPPAQSGSQQSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYS 287
AQP Q +Q +QQ QGPSTPPTGFPSFSPPP V G GS AGSA N+S
Sbjct 233 AQPSPQSGSQPSAQQ--QGPSTPPTGFPSFSPPPNV--GGGSDAGSATANFS 280
>gi|296169715|ref|ZP_06851332.1| antigenic protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295895612|gb|EFG75309.1| antigenic protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length=294
Score = 207 bits (526), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 166/293 (57%), Positives = 198/293 (68%), Gaps = 28/293 (9%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP A P GSY G TPSF D+G +KLP+YLNIAV VLGLA Y +FGP F
Sbjct 1 MTYSPGSPGYPPA-PGGSYAGGTPSFTKDDDGTTKLPLYLNIAVVVLGLAVYLLNFGPTF 59
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ ELG G G +GD G V VA+LAALLAG++LVPKAKS+ +VAV+ VLG L ++
Sbjct 60 TIGAELGPGVGGRAGDAGTAVIVAVLAALLAGLSLVPKAKSYAGIVAVIAVLGALLAITE 119
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
T N P+ ++ GWA+W ++A V QA+AAV+ +L++ G ITAPAPRPK+DPY QYG+YGQY
Sbjct 120 TINLPAGFAIGWAMWPLVACSVLQAIAAVVVVLLDAGVITAPAPRPKYDPYAQYGQYGQY 179
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPP- 239
GQYG QP Q PGYGSQYGGY +P Q G TA P
Sbjct 180 GQYGQQPYYGQPGGQQQH---------------PGYGSQYGGY--APGQ-GPTQTAVPTG 221
Query 240 ---AQPPAQSGSQ-QSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSN 288
AQ QSG+Q + QGPSTPPTGFPSFSPPP +AG GS GSA NYSN
Sbjct 222 GFGAQSAPQSGAQPAAQQGPSTPPTGFPSFSPPP--AAGAGS-VGSA-SNYSN 270
>gi|254773958|ref|ZP_05215474.1| hypothetical protein MaviaA2_04689 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=302
Score = 195 bits (495), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 166/297 (56%), Positives = 200/297 (68%), Gaps = 11/297 (3%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ G+Y G TPSFA D+G SKLP+YLNIAV LG AAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQSGGTYAGATPSFAKDDDGKSKLPLYLNIAVVALGFAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VALLAALLAG+ L+PKAKS+V VVAV+ VL L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVALLAALLAGLGLLPKAKSYVGVVAVVAVLAALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
T N P+ ++ GWA+W ++A +V QA+AAV+ +L++ G ITAPAPRPK+DPY QYG+YGQY
Sbjct 121 TINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDAGVITAPAPRPKYDPYAQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG QP G Q G Q SPQ G G +P+ G+ AQ
Sbjct 181 GQYGQQPYYGQPGGQPGGQPGGQQHGQQHSPQGYGSQYGGYGQGGAPT---GGFGAQ--- 234
Query 241 QPPAQSGSQQS--HQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQS 295
P QSG QQS QGPSTPPTGFPSFSPPP V G GS +GSA NYS +GG+QS
Sbjct 235 -PSPQSGPQQSAQQQGPSTPPTGFPSFSPPPNV--GGGSDSGSATANYSEQAGGQQS 288
>gi|118464677|ref|YP_880332.1| 34 kDa antigenic protein [Mycobacterium avium 104]
gi|118165964|gb|ABK66861.1| 34 kDa antigenic protein [Mycobacterium avium 104]
Length=302
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 167/297 (57%), Positives = 201/297 (68%), Gaps = 11/297 (3%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ G+Y G TPSFA D+G SKLP+YLNIAV LG AAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQSGGTYAGATPSFAKDDDGKSKLPLYLNIAVVALGFAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VALLAALLAG+ L+PKAKS+V VVAV+ VLG L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVALLAALLAGLGLLPKAKSYVGVVAVVAVLGALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
T N P+ ++ GWA+W ++A +V QA+AAV+ +L++ G ITAPAPRPK+DPY QYG+YGQY
Sbjct 121 TINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDAGVITAPAPRPKYDPYAQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG QP G Q G Q SPQ G G +P+ G+ AQP
Sbjct 181 GQYGQQPYYGQPGGQPGGQPGGQQHGQQHSPQGYGSQYGGYGQGGAPT---GGFGAQP-- 235
Query 241 QPPAQSGSQQS--HQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQS 295
QSG QQS QGPSTPPTGFPSFSPPP V G GS +GSA NYS +GG+QS
Sbjct 236 --SPQSGPQQSAQQQGPSTPPTGFPSFSPPPNV--GGGSDSGSATANYSEQAGGQQS 288
>gi|336461426|gb|EGO40297.1| hypothetical protein MAPs_31670 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=302
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 165/297 (56%), Positives = 199/297 (68%), Gaps = 11/297 (3%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ G+Y G TPSFA D+G SKLP+YLNIAV LG AAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQSGGTYAGATPSFAKDDDGKSKLPLYLNIAVVALGFAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VALLAALLAG+ L+PKAKS+V VVAV+ VL L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVALLAALLAGLGLLPKAKSYVGVVAVVAVLAALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQY 180
T N P+ ++ GWA+W ++A +V QA+AAV+ +L++ G ITAPAPRPK+DPY QYG+YGQY
Sbjct 121 TINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDAGVITAPAPRPKYDPYAQYGQYGQY 180
Query 181 GQYGVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPA 240
GQYG QP G Q G Q SPQ G G +P+ G+ QP
Sbjct 181 GQYGQQPYYGQPGGQPGGQPGGQQHGQQHSPQGYGSQYGGYGQGGAPT---GGFGTQPSP 237
Query 241 QPPAQSGSQQS--HQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGEQS 295
Q SG QQS QGPSTPPTGFPSFSPPP V G GS +GSA NYS +GG+QS
Sbjct 238 Q----SGPQQSAQQQGPSTPPTGFPSFSPPPNV--GGGSDSGSATANYSEQAGGQQS 288
>gi|254823464|ref|ZP_05228465.1| hypothetical protein MintA_26276 [Mycobacterium intracellulare
ATCC 13950]
Length=298
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 153/284 (54%), Positives = 185/284 (66%), Gaps = 21/284 (7%)
Query 14 QPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMFTLSTELGGGDGAV 73
Q G+Y G TPSFA D+G SKLP+YLNIAV VLGL AY +FGP FT+S +LG G G
Sbjct 14 QSGGTYAGATPSFAKEDDGKSKLPLYLNIAVVVLGLVAYLLNFGPTFTISADLGPGIGGR 73
Query 74 SGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSATFNKPSAYSTGWA 133
+GD G V VALLAALLAG++L+PKAKS+V VVAV+ VLG L ++ T N P+ ++ GWA
Sbjct 74 AGDAGTAVVVALLAALLAGLSLLPKAKSYVGVVAVIAVLGALLAITETINLPAGFAIGWA 133
Query 134 LWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQYGQYGVQPGGYYGQ 193
+W ++A IV QA+AAV+ +L+++G ITAP PRPK+DPY QYG+YGQYGQYG QP
Sbjct 134 MWPLVAAIVLQAIAAVVVVLLDSGVITAPTPRPKYDPYSQYGQYGQYGQYGQQPYYGQPG 193
Query 194 QGAQQAAGLQSPGPQQ---SPQPPGYGSQYGGYSSSPS-QSGSGYTAQPPAQPPAQSGSQ 249
S P G+ GG+ + PS QSGS QP AQ
Sbjct 194 GQQHGGQQGYGSQYGGYGASGAPTQGGAPTGGFGAQPSPQSGS----QPSAQ-------- 241
Query 250 QSHQGPSTPPTGFPSFSPPPPVSAGTGSQAGSAPVNYSNPSGGE 293
HQG STPPTGFPSFSPPP V G GS AGS P NYS SGG+
Sbjct 242 --HQGSSTPPTGFPSFSPPPNV--GGGSDAGS-PTNYSEQSGGQ 280
>gi|126211547|gb|ABN80440.1| 29.6 kDa protein [Mycobacterium avium subsp. paratuberculosis]
Length=298
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/171 (60%), Positives = 130/171 (77%), Gaps = 0/171 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ G+Y G TPSFA D+G SKLP+YLNIAV LG AAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQSGGTYAGATPSFAKDDDGKSKLPLYLNIAVVALGFAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VALLAALLAG++L+PKAKS+V VVAV+ VL L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVALLAALLAGLSLLPKAKSYVGVVAVVAVLAALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPY 171
T N P+ ++ GWA+W ++A +V QA+AAV+ +L++ G ITAPAPRPK+DPY
Sbjct 121 TINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDAGVITAPAPRPKYDPY 171
>gi|41406998|ref|NP_959834.1| hypothetical protein MAP0900 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|543722|sp|Q04959.1|34KD_MYCPA RecName: Full=34 kDa antigenic protein
gi|13375559|gb|AAK20393.1|AF334164_1 34 kDa protein [Mycobacterium avium subsp. paratuberculosis]
gi|15705919|gb|AAL05877.1|AF411607_1 34 kDa antigen [Mycobacterium avium subsp. paratuberculosis]
gi|44476|emb|CAA48221.1| 34 kDa protein [Mycobacterium avium subsp. paratuberculosis]
gi|41395349|gb|AAS03217.1| hypothetical protein MAP_0900 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=298
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/171 (60%), Positives = 129/171 (76%), Gaps = 0/171 (0%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYSPG+PGYP AQ G+Y G TPSFA D+G SKLP+YLNIAV LG AAY +FGP F
Sbjct 1 MTYSPGSPGYPPAQSGGTYAGATPSFAKDDDGKSKLPLYLNIAVVALGFAAYLLNFGPTF 60
Query 61 TLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVSA 120
T+ +LG G G +GD G V VALLAALLAG+ L+PKAKS+V VVAV+ VL L ++
Sbjct 61 TIGADLGPGIGGRAGDAGTAVVVALLAALLAGLGLLPKAKSYVGVVAVVAVLAALLAITE 120
Query 121 TFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPY 171
T N P+ ++ GWA+W ++A +V QA+AAV+ +L++ G ITAPAPRPK+DPY
Sbjct 121 TINLPAGFAIGWAMWPLVACVVLQAIAAVVVVLLDAGVITAPAPRPKYDPY 171
>gi|333989541|ref|YP_004522155.1| transmembrane protein [Mycobacterium sp. JDM601]
gi|333485509|gb|AEF34901.1| transmembrane protein [Mycobacterium sp. JDM601]
Length=299
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/240 (51%), Positives = 146/240 (61%), Gaps = 22/240 (9%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHAD-EGASKLPMYLNIAVAVLGLAAYFASFGPM 59
MTYSPGNPG+ AQP GSYG PSFA + + SKLP+YL IAV VLG Y +FGP+
Sbjct 1 MTYSPGNPGFQPAQPPGSYGQSPPSFAKSGGDNESKLPLYLQIAVVVLGFGVYLGNFGPI 60
Query 60 FTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLGVFLMVS 119
T++ G + GD G V +ALLAALLAG L+PKAK + VVA + L L ++
Sbjct 61 VTVTD---GEFPLILGDAGHTVPLALLAALLAGAGLLPKAKLYTAVVAAIATLAALLAIA 117
Query 120 ATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYGQ 179
Y GW LW+VL F V QAVAA+ +LL+E G +TAPAPRPK+DP
Sbjct 118 TIAEAGENYEIGWGLWLVLTFSVLQAVAALGSLLLEAGVVTAPAPRPKYDP--------- 168
Query 180 YGQYGVQPGG-YYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQP 238
Y QYG+ PGG YYGQ G QQ G Q GPQQS GY S YG Y S+PS G G + P
Sbjct 169 YAQYGLPPGGNYYGQPG-QQGYGHQ--GPQQS----GYPS-YGSYPSAPSSGGFGAQSAP 220
>gi|108801286|ref|YP_641483.1| hypothetical protein Mmcs_4322 [Mycobacterium sp. MCS]
gi|119870437|ref|YP_940389.1| hypothetical protein Mkms_4408 [Mycobacterium sp. KMS]
gi|126437267|ref|YP_001072958.1| hypothetical protein Mjls_4702 [Mycobacterium sp. JLS]
gi|108771705|gb|ABG10427.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119696526|gb|ABL93599.1| conserved hypothetical protein [Mycobacterium sp. KMS]
gi|126237067|gb|ABO00468.1| hypothetical protein Mjls_4702 [Mycobacterium sp. JLS]
Length=295
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/180 (48%), Positives = 111/180 (62%), Gaps = 11/180 (6%)
Query 1 MTYSPGNPGYPQA-QPAGSYGGVTPSFAH------ADEGASKLPMYLNIAVAVLGLAAYF 53
MTYSPG+PGYP A QP + T F A EG +KLP YL + VA LGL Y
Sbjct 1 MTYSPGSPGYPPANQPTTQFSAPTQHFGKVPEQPAAGEGPNKLPAYLLMVVAALGLLVYL 60
Query 54 ASFGPMFTLS-TELGGGDGAVSGDT---GLPVGVALLAALLAGVALVPKAKSHVTVVAVL 109
+FGP+F +S ++ G G VSG T GL V AL A LLAGV L+ K +++V + AVL
Sbjct 61 CNFGPIFEVSASDFLGQGGTVSGSTLGIGLAVISALTAGLLAGVTLLSKGRTYVAIAAVL 120
Query 110 GVLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFD 169
VL + L+++ NKPS S GWAL+ ++ + QA +AV ALL +TG +T P PRPK+D
Sbjct 121 SVLALLLVIAELINKPSEASIGWALYALIVLSLLQAGSAVAALLFDTGVLTPPTPRPKYD 180
>gi|315442907|ref|YP_004075786.1| hypothetical protein Mspyr1_12710 [Mycobacterium sp. Spyr1]
gi|315261210|gb|ADT97951.1| hypothetical protein Mspyr1_12710 [Mycobacterium sp. Spyr1]
Length=296
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/179 (39%), Positives = 99/179 (56%), Gaps = 12/179 (6%)
Query 1 MTYSPGNPG-YPQAQ--------PAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAA 51
MTY G PG +P AQ P + + P + GA+KLP YL A A+LGL
Sbjct 1 MTYPQGAPGGFPPAQQPTNQFSAPTQQFSTLPPDNEQSQAGANKLPTYLAGATALLGLLT 60
Query 52 YFASFGPMFTLST-ELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLG 110
Y ASFGP +L ++ V D L + A+LA L+AGV L+P+ +VAVL
Sbjct 61 YLASFGPKLSLDDAQIDVSLSPVRLD--LALVAAVLAGLIAGVGLLPRQTPRPALVAVLS 118
Query 111 VLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFD 169
+LG + ++ F+ + GW +++V+AF + QA AV+ LL ++G IT P PRPK+D
Sbjct 119 LLGFLIALATLFDGFEGTTVGWGVYLVIAFTLLQAAVAVVCLLFDSGIITPPVPRPKYD 177
>gi|145222462|ref|YP_001133140.1| hypothetical protein Mflv_1872 [Mycobacterium gilvum PYR-GCK]
gi|145214948|gb|ABP44352.1| hypothetical protein Mflv_1872 [Mycobacterium gilvum PYR-GCK]
Length=296
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/179 (39%), Positives = 99/179 (56%), Gaps = 12/179 (6%)
Query 1 MTYSPGNPG-YPQAQ--------PAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAA 51
MTY G PG +P AQ P + + P + GA+KLP YL A A+LGL
Sbjct 1 MTYPQGAPGGFPPAQQPTNQFSAPTQQFSTLPPDNEQSQAGANKLPTYLAGATALLGLLT 60
Query 52 YFASFGPMFTLST-ELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLG 110
Y ASFGP +L ++ V D L + A+LA L+AGV L+P+ +VAVL
Sbjct 61 YLASFGPKLSLDDAQIDVSLSPVRLD--LALVAAVLAGLIAGVGLLPRQTPRPALVAVLS 118
Query 111 VLGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFD 169
+LG + ++ F+ + GW +++V+AF + QA AV+ LL ++G IT P PRPK+D
Sbjct 119 LLGFLIALATLFDGFEGTTVGWGVYLVIAFTLLQAAVAVVCLLFDSGIITPPVPRPKYD 177
>gi|120405809|ref|YP_955638.1| hypothetical protein Mvan_4859 [Mycobacterium vanbaalenii PYR-1]
gi|119958627|gb|ABM15632.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1]
Length=281
Score = 103 bits (257), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/192 (43%), Positives = 106/192 (56%), Gaps = 17/192 (8%)
Query 4 SPGNPGYPQ-AQPAGSYGGVTPSFAH---AD---EGASKLPMYLNIAVAVLGLAAYFASF 56
+PG G+P QP + T F AD EG SKLP+YL+ AV LGL Y +SF
Sbjct 7 APGGQGFPPGQQPTTQFSAPTQQFNRVPDADPVAEGPSKLPVYLSAAVVALGLLVYMSSF 66
Query 57 GPMFTLST-----ELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAVLGV 111
GP FT S EL G V L V A+ A L A V L+P+ + V AV V
Sbjct 67 GPHFTASDFSAFGELTGSSFGVI----LAVISAITAGLFAAVGLLPRQNNFTAVAAVAAV 122
Query 112 LGVFLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPY 171
L + L+V+ NKP+ S GW L++V+AFI+ QA +V+ LL + G IT P PRPK++
Sbjct 123 LALLLVVAEIINKPAEASIGWGLYLVIAFILLQAAVSVVVLLFDAGIITPPVPRPKYEQP 182
Query 172 GQYGRY-GQYGQ 182
YG+Y G YGQ
Sbjct 183 QSYGQYPGYYGQ 194
>gi|226307913|ref|YP_002767873.1| hypothetical protein RER_44260 [Rhodococcus erythropolis PR4]
gi|226187030|dbj|BAH35134.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length=346
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/207 (35%), Positives = 94/207 (46%), Gaps = 35/207 (16%)
Query 1 MTYSPGNPGY-PQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPM 59
MT++P P + P QPA A G L L IAVA LGL + F P
Sbjct 1 MTFTPQGPSFGPPNQPA------------AGGGTKNLGFILLIAVAALGLINFLLGFAPF 48
Query 60 -----------FTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAV 108
L T + ++ G +G ++AGV+L+PK +S+ + A
Sbjct 49 TSISGSSSGIGSGLDTSSSFFESSIYG-----LGFVFAGGVVAGVSLLPK-QSYAGIAAA 102
Query 109 LGVLGVFLMVSATFNKPSA----YSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAP 164
L + G F +V A F+ ++ S GW L +VL Q V AV ALL E G + APAP
Sbjct 103 LTLTGFFALVFAAFSVGTSDYVDISLGWGLIIVLILSFVQTVVAVAALLFEIGILKAPAP 162
Query 165 RPKFDPYGQYGRYGQ-YGQYGVQPGGY 190
RP YGQ YGQ GQ QP GY
Sbjct 163 RPVAQQYGQPQGYGQPQGQAPGQPQGY 189
>gi|169628156|ref|YP_001701805.1| 34 kDa antigenic protein [Mycobacterium abscessus ATCC 19977]
gi|169240123|emb|CAM61151.1| 34 kDa antigenic protein homolog [Mycobacterium abscessus]
Length=341
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 94/322 (30%), Positives = 116/322 (37%), Gaps = 93/322 (28%)
Query 1 MTYSPGNPGYPQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPMF 60
MTYS G PGY AQP+ YG TPSF A+ L +YL V VL L + A FGP +
Sbjct 1 MTYSTGGPGYQPAQPSNPYG--TPSFV-AEPNTGALGVYLPGGVLVLSLIGFIAGFGPFY 57
Query 61 TLSTELGGGDGAVSGDT-------GLPVGVALLAALLAGVALVPKAKSHVTVVAVLGVLG 113
T G D G L+A L AGV+L+ VA+L ++G
Sbjct 58 TGKASSGTSGSFGGFDLLALSPVFGFAQFALLIAGLTAGVSLLSGKDDKQAPVAILSIVG 117
Query 114 VFLMVSATFNKPSAYSTG-----WALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKF 168
++ F P A + G W L + QA +V +LL E G I A P
Sbjct 118 FLFVLGGLFGNPFAAAVGEVGIGWGLITLAVVSGLQAAVSVYSLLSEVGVIKAKTASPAA 177
Query 169 DPYGQYGRYGQYGQYGVQPGGY-------------------------------------- 190
+P+G QY Q Y
Sbjct 178 NPFGN--------QYQPQQSYYTPAQQQPQQQLPKQGQGQSYGQAQGYGQQQGYGQQQPA 229
Query 191 --YGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSGSGYTAQPPAQPPAQSGS 248
YGQ GAQ A PGYG Q ++ PS G G
Sbjct 230 QGYGQSGAQAA--------------PGYGQQQSAPAAPPSYGGYG--------------Q 261
Query 249 QQSHQGPSTPPTGFPS--FSPP 268
QQ P TPP GF S F+PP
Sbjct 262 QQPQSAPPTPPQGFSSSGFTPP 283
>gi|229495104|ref|ZP_04388850.1| antigen 34 kDa [Rhodococcus erythropolis SK121]
gi|229318035|gb|EEN83910.1| antigen 34 kDa [Rhodococcus erythropolis SK121]
Length=347
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/182 (34%), Positives = 83/182 (46%), Gaps = 34/182 (18%)
Query 1 MTYSPGNPGY-PQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPM 59
MT++P P + P QPA GG G L L IAVA LGL + F P
Sbjct 1 MTFTPQGPSFGPPNQPAA--GG----------GTKNLGFILLIAVAALGLINFLLGFAPF 48
Query 60 -----------FTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPKAKSHVTVVAV 108
L T + ++ G +G ++AGV+L+PK +S+ + A
Sbjct 49 TSISGSSSGIGSGLDTSSSFFESSIYG-----LGFVFAGGVVAGVSLLPK-QSYAGIAAA 102
Query 109 LGVLGVFLMVSATFNKPSA----YSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAP 164
L + G F +V A F+ ++ S GW L +VL Q V AV ALL E G + APAP
Sbjct 103 LTLTGFFALVFAAFSVGTSDYVDISLGWGLIIVLILSFVQTVVAVAALLFEIGILKAPAP 162
Query 165 RP 166
RP
Sbjct 163 RP 164
>gi|118470898|ref|YP_889755.1| antigen 34 kDa [Mycobacterium smegmatis str. MC2 155]
gi|118172185|gb|ABK73081.1| antigen 34 kDa [Mycobacterium smegmatis str. MC2 155]
Length=299
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/237 (33%), Positives = 104/237 (44%), Gaps = 43/237 (18%)
Query 16 AGSYGGVTPSFAHADE----GASKLPMYLNIAVAVLGLAAYFASFGPMFTLSTELGGGDG 71
+GS G T F E G S LP L A GL AYF S+G
Sbjct 16 SGSQYGATQPFGKPAETAPAGESSLPQILLGVAAAAGLIAYFVSYG-------------- 61
Query 72 AVSGDTGLPVGVALLAALLAGV---------ALVPKAKSHVTVVAVLGVLG----VFLMV 118
D VG ++ ++ +L+PK K+H V +VL ++ V+L++
Sbjct 62 --IEDAQFAVGAPIVQVIVVAALAGALLAGVSLLPKQKNHAGVASVLALVAFLQSVYLVI 119
Query 119 SATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQYGRYG 178
A + +GWA +L + QA AA+ LL ++G +T P P+P ++ QYG+YG
Sbjct 120 LAGSD------SGWAFITILVLTLIQAGAALTVLLFDSGILTPPPPKPAYEQQPQYGQYG 173
Query 179 QYGQY----GVQPGGYYGQQGAQQAAGLQSPGPQQSPQPPGYGSQYGGYSSSPSQSG 231
QY Q G Q QQ Q Q Q PGY SQYGGYS+ PS G
Sbjct 174 APSQYYGQQPGQQPGQQPGQHGQQPGQQQGQPSYQQGQRPGYPSQYGGYSAGPSTGG 230
>gi|331699078|ref|YP_004335317.1| antigen 34 kDa family protein [Pseudonocardia dioxanivorans CB1190]
gi|326953767|gb|AEA27464.1| antigen 34 kDa family protein [Pseudonocardia dioxanivorans CB1190]
Length=262
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/133 (34%), Positives = 59/133 (45%), Gaps = 19/133 (14%)
Query 42 IAVAVLGLAAYFASFGPMFTLSTELGGGDGAVSGDTGLPVGVALL--AALLAGVALVPKA 99
+ V LG+ Y SF F L V G L +G L+ AA+ G+ L+P A
Sbjct 22 LGVGALGIVVYLCSFSSAFLLYL--------VQGQQLLMIGGLLVAAAAIRRGL-LIPGA 72
Query 100 KSHVTVVAVLGVLGVFLM------VSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALL 153
VTVV L VL L + +F + S + VVL + QA AVL +L
Sbjct 73 V--VTVVGALAVLQAVLFGNSVAGLLGSFGGSAGASLPAIMIVVLVLALLQAAGAVLVVL 130
Query 154 VETGAITAPAPRP 166
+ G + PAPRP
Sbjct 131 FDLGIVKPPAPRP 143
>gi|111022542|ref|YP_705514.1| 34 kDa antigenic protein [Rhodococcus jostii RHA1]
gi|110822072|gb|ABG97356.1| possible 34 kDa antigenic protein [Rhodococcus jostii RHA1]
Length=356
Score = 40.0 bits (92), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 72/209 (35%), Positives = 94/209 (45%), Gaps = 36/209 (17%)
Query 1 MTYSPGNPGY-PQAQPAGSYGGVTPSFAHADEGASKLPMYLNIAVAVLGLAAYFASFGPM 59
MT++PG P Y P AQP G P L +L I VAVLG+ F P
Sbjct 1 MTFTPGGPSYGPPAQPTA---GGEPK---------GLGFFLLIGVAVLGVLNLLLGFAPY 48
Query 60 FTLSTELGGGDGAVSGDTGLPVGVALLAALLAGVALVPK-----AKSHVTVVAVLGVLGV 114
TL+ E A + GL LLAA V+L+PK A + +V + L V
Sbjct 49 ATLARESVNSFEANTDGLGLLFLGGLLAA----VSLLPKQSYAGAAAAASVAGWVVALFV 104
Query 115 FLMVSATFNKPSAYSTGWALWVVLAFIVFQAVAAVLALLVETGAITAPAPRPKFDPYGQY 174
FL V A +GW ++L Q+ AV A L + G + PAP+P G +
Sbjct 105 FLNVDA--------DSGWGAILILVLGFIQSAVAVAATLFDIGLLKQPAPKPS--AAGGF 154
Query 175 GRYGQYGQ-YGV-QPGGYYGQQGAQQAAG 201
G+ GQ Q YG P GY QG+QQ+ G
Sbjct 155 GQPGQASQGYGQGAPQGY--GQGSQQSYG 181
Lambda K H
0.312 0.132 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 508884486504
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40