BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0962c

Length=224
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608102|ref|NP_215477.1|  lipoprotein LprP [Mycobacterium tub...   458    2e-127
gi|15840387|ref|NP_335424.1|  putative lipoprotein [Mycobacterium...   456    1e-126
gi|339293968|gb|AEJ46079.1|  putative lipoprotein [Mycobacterium ...   424    7e-117
gi|340625975|ref|YP_004744427.1|  putative lipoprotein LPRP [Myco...   394    5e-108
gi|289749488|ref|ZP_06508866.1|  lipoprotein lprP [Mycobacterium ...   369    3e-100
gi|240169359|ref|ZP_04748018.1|  putative lipoprotein [Mycobacter...   361    6e-98 
gi|85717436|ref|ZP_01048385.1|  ISPsy14, transposase [Nitrobacter...  40.8    0.17  
gi|289579403|ref|YP_003478030.1|  copper amine oxidase domain pro...  38.5    0.70  
gi|13488090|ref|NP_085699.1|  oligopeptide ABC transporter ATP-bi...  37.7    1.4   
gi|126289989|ref|XP_001364012.1|  PREDICTED: transcription factor...  36.6    3.0   
gi|170041738|ref|XP_001848610.1|  conserved hypothetical protein ...  36.2    4.1   
gi|313891814|ref|ZP_07825419.1|  outer membrane protein [Dialiste...  35.8    4.7   
gi|334128477|ref|ZP_08502365.1|  dihydroxyacetone kinase [Centipe...  35.0    7.3   
gi|345355686|gb|EGW87895.1|  N-ethylmaleimide reductase domain pr...  35.0    7.6   


>gi|15608102|ref|NP_215477.1| lipoprotein LprP [Mycobacterium tuberculosis H37Rv]
 gi|148660742|ref|YP_001282265.1| putative lipoprotein LprP [Mycobacterium tuberculosis H37Ra]
 gi|167967735|ref|ZP_02550012.1| putative lipoprotein LprP [Mycobacterium tuberculosis H37Ra]
 gi|307083485|ref|ZP_07492598.1| lipoprotein lprP [Mycobacterium tuberculosis SUMu012]
 gi|2829499|sp|P71548.1|LPRP_MYCTU RecName: Full=Uncharacterized lipoprotein lprP; Flags: Precursor
 gi|1524200|emb|CAB01988.1| POSSIBLE LIPOPROTEIN LPRP [Mycobacterium tuberculosis H37Rv]
 gi|148504894|gb|ABQ72703.1| putative lipoprotein LprP [Mycobacterium tuberculosis H37Ra]
 gi|308366900|gb|EFP55751.1| lipoprotein lprP [Mycobacterium tuberculosis SUMu012]
Length=224

 Score =  458 bits (1179),  Expect = 2e-127, Method: Compositional matrix adjust.
 Identities = 224/224 (100%), Positives = 224/224 (100%), Gaps = 0/224 (0%)

Query  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60
            MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA
Sbjct  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60

Query  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120
            NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW
Sbjct  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120

Query  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180
            LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY
Sbjct  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180

Query  181  NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224
            NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY
Sbjct  181  NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224


>gi|15840387|ref|NP_335424.1| putative lipoprotein [Mycobacterium tuberculosis CDC1551]
 gi|31792151|ref|NP_854644.1| lipoprotein LprP [Mycobacterium bovis AF2122/97]
 gi|121636888|ref|YP_977111.1| putative lipoprotein lprP [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 71 more sequence titles
 Length=224

 Score =  456 bits (1172),  Expect = 1e-126, Method: Compositional matrix adjust.
 Identities = 223/224 (99%), Positives = 223/224 (99%), Gaps = 0/224 (0%)

Query  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60
            MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA
Sbjct  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60

Query  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120
            NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW
Sbjct  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120

Query  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180
            LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY
Sbjct  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180

Query  181  NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224
            NTGCH PAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY
Sbjct  181  NTGCHLPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224


>gi|339293968|gb|AEJ46079.1| putative lipoprotein [Mycobacterium tuberculosis CCDC5079]
Length=225

 Score =  424 bits (1089),  Expect = 7e-117, Method: Compositional matrix adjust.
 Identities = 223/225 (99%), Positives = 223/225 (99%), Gaps = 1/225 (0%)

Query  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQ-L  59
            MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQ L
Sbjct  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQQL  60

Query  60   ANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQ  119
            ANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQ
Sbjct  61   ANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQ  120

Query  120  WLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYS  179
            WLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYS
Sbjct  121  WLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYS  180

Query  180  YNTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224
            YNTGCH PAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY
Sbjct  181  YNTGCHLPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  225


>gi|340625975|ref|YP_004744427.1| putative lipoprotein LPRP [Mycobacterium canettii CIPT 140010059]
 gi|340004165|emb|CCC43303.1| putative lipoprotein LPRP [Mycobacterium canettii CIPT 140010059]
Length=223

 Score =  394 bits (1012),  Expect = 5e-108, Method: Compositional matrix adjust.
 Identities = 208/224 (93%), Positives = 213/224 (96%), Gaps = 1/224 (0%)

Query  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60
            MKR SRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA
Sbjct  1    MKRLSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60

Query  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120
            NLDATIRAMIAKYSPQT+FS+ +   H   GCNDPFTRTIGRQE S+ FFGRPAPTPQQW
Sbjct  61   NLDATIRAMIAKYSPQTQFSS-LATGHPPGGCNDPFTRTIGRQEESDHFFGRPAPTPQQW  119

Query  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180
            LQIVTELAPVFKAAGFRPN+SVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY
Sbjct  120  LQIVTELAPVFKAAGFRPNDSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  179

Query  181  NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224
            NTGCH PAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY
Sbjct  180  NTGCHLPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  223


>gi|289749488|ref|ZP_06508866.1| lipoprotein lprP [Mycobacterium tuberculosis T92]
 gi|289690075|gb|EFD57504.1| lipoprotein lprP [Mycobacterium tuberculosis T92]
Length=182

 Score =  369 bits (946),  Expect = 3e-100, Method: Compositional matrix adjust.
 Identities = 179/181 (99%), Positives = 180/181 (99%), Gaps = 0/181 (0%)

Query  44   KIVNGRPDLETVQQQLANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQ  103
            +IVNGRPDLETVQQQLANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQ
Sbjct  2    EIVNGRPDLETVQQQLANLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQ  61

Query  104  EASELFFGRPAPTPQQWLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGV  163
            EASELFFGRPAPTPQQWLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGV
Sbjct  62   EASELFFGRPAPTPQQWLQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGV  121

Query  164  TINLVNGDNRGPLGYSYNTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDA  223
            TINLVNGDNRGPLGYSYNTGCH PAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDA
Sbjct  122  TINLVNGDNRGPLGYSYNTGCHLPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDA  181

Query  224  Y  224
            Y
Sbjct  182  Y  182


>gi|240169359|ref|ZP_04748018.1| putative lipoprotein [Mycobacterium kansasii ATCC 12478]
Length=223

 Score =  361 bits (926),  Expect = 6e-98, Method: Compositional matrix adjust.
 Identities = 176/224 (79%), Positives = 190/224 (85%), Gaps = 1/224 (0%)

Query  1    MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60
            M R  R  TA LL +  LL GC+KPNT DPYANPGRGELDR Q+IVN RPDLETVQQQLA
Sbjct  1    MNRPHRYATAGLLSVTLLLTGCLKPNTLDPYANPGRGELDRLQQIVNKRPDLETVQQQLA  60

Query  61   NLDATIRAMIAKYSPQTRFSTGVTVSHLTNGCNDPFTRTIGRQEASELFFGRPAPTPQQW  120
            NLDATIRA+IA+YSPQT+FS+  +VSH TNGCNDPF RTIGRQ  S+ FFG PAPTP+QW
Sbjct  61   NLDATIRAVIAEYSPQTKFSS-TSVSHPTNGCNDPFVRTIGRQVGSDHFFGEPAPTPEQW  119

Query  121  LQIVTELAPVFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSY  180
            L+IVTELAPVFKAAGFRPNN+ PGD P PLG+ N SQIRDDGV I LVNGD   PL YSY
Sbjct  120  LRIVTELAPVFKAAGFRPNNAAPGDAPLPLGSANDSQIRDDGVLIRLVNGDEHSPLSYSY  179

Query  181  NTGCHPPAAWRTAPPPLNMRPANDPDVHYPYLYGSPGGRTRDAY  224
            +TGCH PAAWRTAPPPLNMRP NDPDVHYPYLYGSPGGRTRDAY
Sbjct  180  DTGCHLPAAWRTAPPPLNMRPPNDPDVHYPYLYGSPGGRTRDAY  223


>gi|85717436|ref|ZP_01048385.1| ISPsy14, transposase [Nitrobacter sp. Nb-311A]
 gi|85695738|gb|EAQ33647.1| ISPsy14, transposase [Nitrobacter sp. Nb-311A]
Length=396

 Score = 40.8 bits (94),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 26/75 (35%), Positives = 36/75 (48%), Gaps = 7/75 (9%)

Query  144  GDPPQPLGAPNYS----QIRDDGVTINLVNGDNR--GPLGYSYNTGCHPPAAW-RTAPPP  196
            G PPQ LG P+++    +++  GVT+ L+  + R   P GY Y   C   AAW R A P 
Sbjct  67   GRPPQDLGEPDWARVAQELKRKGVTLTLLWQEYRTAHPEGYGYTWFCERFAAWQRRAHPT  126

Query  197  LNMRPANDPDVHYPY  211
               R A    +   Y
Sbjct  127  FRHRHAAGAVLQTDY  141


>gi|289579403|ref|YP_003478030.1| copper amine oxidase domain protein [Thermoanaerobacter italicus 
Ab9]
 gi|289529116|gb|ADD03468.1| copper amine oxidase domain protein [Thermoanaerobacter italicus 
Ab9]
Length=452

 Score = 38.5 bits (88),  Expect = 0.70, Method: Compositional matrix adjust.
 Identities = 28/96 (30%), Positives = 44/96 (46%), Gaps = 11/96 (11%)

Query  57   QQLANLDATIRAMI-------AKYSPQTRFSTGVTVSH--LTNGCNDPFTRTIGRQEASE  107
            QQL   ++ +R +I       +KY P+     G  V    L NG    F    G++ AS 
Sbjct  27   QQLPKKNSNVRVLIEVDDYKLSKYEPKKGAYLGAYVYQDTLINGDMKKFNELTGKKHASF  86

Query  108  -LFFGRPAPTPQQWLQIVTELAPVFKAAGFRPNNSV  142
             ++ G  +P PQ+W+  + E+      A F PNN +
Sbjct  87   FIYVGYGSPFPQKWIDQLKEVGAAAHIA-FEPNNGL  121


>gi|13488090|ref|NP_085699.1| oligopeptide ABC transporter ATP-binding protein [Mesorhizobium 
loti MAFF303099]
 gi|14027948|dbj|BAB54540.1| oligopeptide ABC transporter ATP-binding protein [Mesorhizobium 
loti MAFF303099]
Length=335

 Score = 37.7 bits (86),  Expect = 1.4, Method: Compositional matrix adjust.
 Identities = 48/167 (29%), Positives = 67/167 (41%), Gaps = 32/167 (19%)

Query  6    RSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGR-----PDLETVQQQLA  60
            R  T ALL    L     +P+ F  Y +   G   +RQ+++  R     PDL    + ++
Sbjct  133  REKTQALLSTVGL-----RPDQFASYPHELSG--GQRQRVILARALVLDPDLLVCDEPVS  185

Query  61   NLDATIRAMIAKYSPQTRFSTGVT---VSHLTNGCNDPFTRTI----GR--QEAS--ELF  109
             LD ++ A +       + S G+T   +SH          R I    GR  +EAS  ELF
Sbjct  186  ALDVSVGAQVVNLLKDVQASRGLTYLFISHDLKIVRQIADRVIVMYLGRIMEEASATELF  245

Query  110  FGRPAPTPQQWLQIVTELAPVFKAAGFRPNNS--VPGDPPQPLGAPN  154
                 P  Q  L  V  L P        P     + GDPP P+  PN
Sbjct  246  RNPLHPYTQALLSAVPSLKP-------HPQRRLIIQGDPPNPMEVPN  285


>gi|126289989|ref|XP_001364012.1| PREDICTED: transcription factor IIIB 90 kDa subunit [Monodelphis 
domestica]
Length=681

 Score = 36.6 bits (83),  Expect = 3.0, Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 31/60 (52%), Gaps = 5/60 (8%)

Query  9    TAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLANLDATIRA  68
            TAA LGI   +  CI P + +P  N G GELD     +NG  D E  +  L   +A I+A
Sbjct  421  TAASLGITESIRECISPQSREPNENSGDGELD-----LNGIDDSEIDRYILNENEAQIKA  475


>gi|170041738|ref|XP_001848610.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167865270|gb|EDS28653.1| conserved hypothetical protein [Culex quinquefasciatus]
Length=280

 Score = 36.2 bits (82),  Expect = 4.1, Method: Compositional matrix adjust.
 Identities = 26/80 (33%), Positives = 37/80 (47%), Gaps = 8/80 (10%)

Query  105  ASELFFGRPAPTPQQWLQIVTELAPVFKAAGFRPNNSVP-GDPPQPLGAPNYSQIRDDGV  163
            +S  F G+PAP   Q+   V  LAP     G+ P   +P  + P PL   N+  +     
Sbjct  170  SSSFFSGKPAPIYNQF--TVQHLAPHLSTLGYNPRFGLPLNNAPSPLLTKNHGPVALGSG  227

Query  164  TINLVNGDN-----RGPLGY  178
            +I +V+G N      G LGY
Sbjct  228  SIGIVHGPNGVALGSGSLGY  247


>gi|313891814|ref|ZP_07825419.1| outer membrane protein [Dialister microaerophilus UPII 345-E]
 gi|329121152|ref|ZP_08249783.1| outer membrane chaperone Skp (OmpH) [Dialister micraerophilus 
DSM 19965]
 gi|313119808|gb|EFR42995.1| outer membrane protein [Dialister microaerophilus UPII 345-E]
 gi|327471314|gb|EGF16768.1| outer membrane chaperone Skp (OmpH) [Dialister micraerophilus 
DSM 19965]
Length=144

 Score = 35.8 bits (81),  Expect = 4.7, Method: Compositional matrix adjust.
 Identities = 23/75 (31%), Positives = 39/75 (52%), Gaps = 10/75 (13%)

Query  1   MKRTSRSLTAALLGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLA  60
           MK   +S   A++  A +L+GC          +   G +D  +KI N  P ++ +Q+++ 
Sbjct  1   MKLWKKSALIAMIAAATVLSGC---------GSEKVGVVDF-EKIQNESPKIKEIQKEVI  50

Query  61  NLDATIRAMIAKYSP  75
           N DA IRA +AK + 
Sbjct  51  NKDAEIRARLAKETE  65


>gi|334128477|ref|ZP_08502365.1| dihydroxyacetone kinase [Centipeda periodontii DSM 2778]
 gi|333387154|gb|EGK58357.1| dihydroxyacetone kinase [Centipeda periodontii DSM 2778]
Length=334

 Score = 35.0 bits (79),  Expect = 7.3, Method: Compositional matrix adjust.
 Identities = 25/79 (32%), Positives = 41/79 (52%), Gaps = 5/79 (6%)

Query  13   LGIAALLAGCIKPNTFDPYANPGRGELDRRQKIVNGRPDLETVQQQLANLDATIRAMIAK  72
            +G+A  L  CI P       + G  E++    I +G P +E  + +L  +DAT+  M+A+
Sbjct  189  MGVA--LTPCIVPEAGKATFSIGDDEMEIGMGI-HGEPGIE--RTKLQTIDATVETMLAR  243

Query  73   YSPQTRFSTGVTVSHLTNG  91
                  F++G TV+ L NG
Sbjct  244  ILDDLPFASGDTVAVLVNG  262


>gi|345355686|gb|EGW87895.1| N-ethylmaleimide reductase domain protein [Escherichia coli 3030-1]
 gi|345359731|gb|EGW91906.1| N-ethylmaleimide reductase domain protein [Escherichia coli STEC_DG131-3]
 gi|345394001|gb|EGX23766.1| N-ethylmaleimide reductase domain protein [Escherichia coli TX1999]
Length=120

 Score = 35.0 bits (79),  Expect = 7.6, Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 39/90 (44%), Gaps = 8/90 (8%)

Query  130  VFKAAGFRPNNSVPGDPPQPLGAPNYSQIRDDGVTINLVNGDNRGPLGYSYNTGCHPP--  187
            +F A   R  +  PGD P PL A  Y Q    G+ I+     +    GY+   G H P  
Sbjct  21   IFMAPLTRLRSIEPGDIPTPLMAEYYRQRASAGLIISEATQISAQAKGYAGAPGIHSPEQ  80

Query  188  -AAWRTAPPPLNMRPANDPDVHYPYLYGSP  216
             AAW+ +P    ++      V +P   G+P
Sbjct  81   IAAWKKSPLAFMLK-----MVIWPCSCGTP  105



Lambda     K      H
   0.317    0.136    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 286119069840




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40