BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv0963c

Length=266
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608103|ref|NP_215478.1|  hypothetical protein Rv0963c [Mycob...   535    3e-150
gi|323720675|gb|EGB29753.1|  hypothetical protein TMMG_02955 [Myc...   535    4e-150
gi|148822172|ref|YP_001286926.1|  hypothetical protein TBFG_10981...   534    7e-150
gi|308374145|ref|ZP_07435048.2|  hypothetical protein TMFG_02779 ...   533    8e-150
gi|121636889|ref|YP_977112.1|  hypothetical protein BCG_1017c [My...   533    1e-149
gi|289761098|ref|ZP_06520476.1|  conserved hypothetical protein [...   533    1e-149
gi|298524456|ref|ZP_07011865.1|  conserved hypothetical protein [...   532    2e-149
gi|340625976|ref|YP_004744428.1|  hypothetical protein MCAN_09671...   483    1e-134
gi|289446536|ref|ZP_06436280.1|  conserved hypothetical protein [...   442    3e-122
gi|240169358|ref|ZP_04748017.1|  hypothetical protein MkanA1_0859...   424    8e-117
gi|254363887|ref|ZP_04979933.1|  conserved hypothetical protein [...   423    1e-116
gi|226304390|ref|YP_002764348.1|  hypothetical protein RER_09010 ...   146    4e-33 
gi|229494524|ref|ZP_04388287.1|  conserved hypothetical protein [...   144    1e-32 
gi|317509263|ref|ZP_07966884.1|  hypothetical protein HMPREF9336_...   143    3e-32 
gi|296395288|ref|YP_003660172.1|  hypothetical protein Srot_2912 ...   139    5e-31 
gi|296393635|ref|YP_003658519.1|  hypothetical protein Srot_1217 ...   137    2e-30 
gi|183981926|ref|YP_001850217.1|  hypothetical protein MMAR_1913 ...   135    7e-30 
gi|317507796|ref|ZP_07965498.1|  hypothetical protein HMPREF9336_...   134    2e-29 
gi|296393168|ref|YP_003658052.1|  hypothetical protein Srot_0741 ...   134    2e-29 
gi|296392493|ref|YP_003657377.1|  hypothetical protein Srot_0053 ...   134    2e-29 
gi|306785609|ref|ZP_07423931.1|  hypothetical protein TMCG_02042 ...   130    2e-28 
gi|307085494|ref|ZP_07494607.1|  hypothetical protein TMLG_02511 ...   130    3e-28 
gi|254775904|ref|ZP_05217420.1|  hypothetical protein MaviaA2_147...   130    3e-28 
gi|15842335|ref|NP_337372.1|  hypothetical protein MT2866 [Mycoba...   129    3e-28 
gi|339295646|gb|AEJ47757.1|  hypothetical protein CCDC5079_2567 [...   129    3e-28 
gi|289575495|ref|ZP_06455722.1|  conserved hypothetical protein [...   129    3e-28 
gi|289758923|ref|ZP_06518301.1|  conserved hypothetical protein [...   129    3e-28 
gi|15609934|ref|NP_217313.1|  hypothetical protein Rv2797c [Mycob...   129    4e-28 
gi|323718643|gb|EGB27807.1|  hypothetical protein TMMG_02803 [Myc...   129    4e-28 
gi|333988787|ref|YP_004521401.1|  hypothetical protein JDM601_014...   127    2e-27 
gi|296169825|ref|ZP_06851439.1|  conserved hypothetical protein [...   125    6e-27 
gi|240171302|ref|ZP_04749961.1|  hypothetical protein MkanA1_1846...   124    1e-26 
gi|296392595|ref|YP_003657479.1|  hypothetical protein Srot_0159 ...   124    2e-26 
gi|262200424|ref|YP_003271632.1|  hypothetical protein Gbro_0405 ...   122    7e-26 
gi|342858918|ref|ZP_08715572.1|  hypothetical protein MCOL_08578 ...   118    7e-25 
gi|262202342|ref|YP_003273550.1|  hypothetical protein Gbro_2415 ...   117    1e-24 
gi|134097612|ref|YP_001103273.1|  hypothetical protein SACE_1016 ...   117    2e-24 
gi|289448455|ref|ZP_06438199.1|  conserved hypothetical protein [...   115    9e-24 
gi|111019228|ref|YP_702200.1|  hypothetical protein RHA1_ro02235 ...   114    1e-23 
gi|289444345|ref|ZP_06434089.1|  conserved hypothetical protein [...   113    2e-23 
gi|226361364|ref|YP_002779142.1|  hypothetical protein ROP_19500 ...   112    6e-23 
gi|317506264|ref|ZP_07964082.1|  hypothetical protein HMPREF9336_...   108    6e-22 
gi|337768332|emb|CCB77045.1|  conserved protein of unknown functi...   107    1e-21 
gi|118467794|ref|YP_890594.1|  hypothetical protein MSMEG_6381 [M...   105    5e-21 
gi|302528389|ref|ZP_07280731.1|  hypothetical protein SSMG_04771 ...   104    1e-20 
gi|296394913|ref|YP_003659797.1|  hypothetical protein Srot_2529 ...   101    1e-19 
gi|340627558|ref|YP_004746010.1|  hypothetical protein MCAN_25831...  99.8    4e-19 
gi|340358546|ref|ZP_08681061.1|  hypothetical protein HMPREF9062_...  98.2    1e-18 
gi|254381102|ref|ZP_04996467.1|  conserved hypothetical protein [...  96.3    4e-18 
gi|229821763|ref|YP_002883289.1|  hypothetical protein Bcav_3284 ...  95.9    6e-18 


>gi|15608103|ref|NP_215478.1| hypothetical protein Rv0963c [Mycobacterium tuberculosis H37Rv]
 gi|15840389|ref|NP_335426.1| hypothetical protein MT0992 [Mycobacterium tuberculosis CDC1551]
 gi|31792152|ref|NP_854645.1| hypothetical protein Mb0988c [Mycobacterium bovis AF2122/97]
 36 more sequence titles
 
gi|148660743|ref|YP_001282266.1| hypothetical protein MRA_0971 [Mycobacterium tuberculosis H37Ra]
 gi|167967737|ref|ZP_02550014.1| hypothetical protein MtubH3_06753 [Mycobacterium tuberculosis 
H37Ra]
 gi|289442380|ref|ZP_06432124.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289555255|ref|ZP_06444465.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289568937|ref|ZP_06449164.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289573594|ref|ZP_06453821.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289744694|ref|ZP_06504072.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289749491|ref|ZP_06508869.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289753019|ref|ZP_06512397.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289757048|ref|ZP_06516426.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|294996452|ref|ZP_06802143.1| hypothetical protein Mtub2_18594 [Mycobacterium tuberculosis 
210]
 gi|297633487|ref|ZP_06951267.1| hypothetical protein MtubK4_05161 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297730472|ref|ZP_06959590.1| hypothetical protein MtubKR_05241 [Mycobacterium tuberculosis 
KZN R506]
 gi|306806812|ref|ZP_07443480.1| hypothetical protein TMGG_03033 [Mycobacterium tuberculosis SUMu007]
 gi|313657800|ref|ZP_07814680.1| hypothetical protein MtubKV_05236 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339631025|ref|YP_004722667.1| hypothetical protein MAF_09720 [Mycobacterium africanum GM041182]
 gi|54040008|sp|P64778.1|Y988_MYCBO RecName: Full=Uncharacterized protein Mb0988c
 gi|54042496|sp|P64777.1|Y963_MYCTU RecName: Full=Uncharacterized protein Rv0963c/MT0992
 gi|3261629|emb|CAB02008.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13880556|gb|AAK45240.1| hypothetical protein MT0992 [Mycobacterium tuberculosis CDC1551]
 gi|31617740|emb|CAD93849.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|148504895|gb|ABQ72704.1| hypothetical protein MRA_0971 [Mycobacterium tuberculosis H37Ra]
 gi|289415299|gb|EFD12539.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289439887|gb|EFD22380.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289538025|gb|EFD42603.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289542691|gb|EFD46339.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289685222|gb|EFD52710.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289690078|gb|EFD57507.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289693606|gb|EFD61035.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289712612|gb|EFD76624.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|308346718|gb|EFP35569.1| hypothetical protein TMGG_03033 [Mycobacterium tuberculosis SUMu007]
 gi|326904811|gb|EGE51744.1| hypothetical protein TBPG_02730 [Mycobacterium tuberculosis W-148]
 gi|328459751|gb|AEB05174.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339297607|gb|AEJ49717.1| hypothetical protein CCDC5180_0880 [Mycobacterium tuberculosis 
CCDC5180]
 gi|339330381|emb|CCC26044.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|344218789|gb|AEM99419.1| hypothetical protein MTCTRI2_0986 [Mycobacterium tuberculosis 
CTRI-2]
Length=266

 Score =  535 bits (1377),  Expect = 3e-150, Method: Compositional matrix adjust.
 Identities = 265/266 (99%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            +LQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  1    MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266


>gi|323720675|gb|EGB29753.1| hypothetical protein TMMG_02955 [Mycobacterium tuberculosis CDC1551A]
 gi|339293969|gb|AEJ46080.1| hypothetical protein CCDC5079_0890 [Mycobacterium tuberculosis 
CCDC5079]
Length=336

 Score =  535 bits (1377),  Expect = 4e-150, Method: Compositional matrix adjust.
 Identities = 266/266 (100%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  71   VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  130

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  131  VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  190

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  191  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  250

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  251  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  310

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  311  GMTQLSVNTGLAPGPLLGDGQLHERA  336


>gi|148822172|ref|YP_001286926.1| hypothetical protein TBFG_10981 [Mycobacterium tuberculosis F11]
 gi|253800009|ref|YP_003033010.1| hypothetical protein TBMG_03025 [Mycobacterium tuberculosis KZN 
1435]
 gi|254231270|ref|ZP_04924597.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 18 more sequence titles
 
gi|254549945|ref|ZP_05140392.1| hypothetical protein Mtube_05698 [Mycobacterium tuberculosis 
'98-R604 INH-RIF-EM']
 gi|308231680|ref|ZP_07413432.2| hypothetical protein TMAG_00899 [Mycobacterium tuberculosis SUMu001]
 gi|308370116|ref|ZP_07420327.2| hypothetical protein TMBG_01652 [Mycobacterium tuberculosis SUMu002]
 gi|308371810|ref|ZP_07426331.2| hypothetical protein TMDG_03567 [Mycobacterium tuberculosis SUMu004]
 gi|308377562|ref|ZP_07479671.2| hypothetical protein TMIG_03522 [Mycobacterium tuberculosis SUMu009]
 gi|308378773|ref|ZP_07483863.2| hypothetical protein TMJG_02630 [Mycobacterium tuberculosis SUMu010]
 gi|308379916|ref|ZP_07488099.2| hypothetical protein TMKG_03676 [Mycobacterium tuberculosis SUMu011]
 gi|308397517|ref|ZP_07492600.2| hypothetical protein TMLG_01664 [Mycobacterium tuberculosis SUMu012]
 gi|124600329|gb|EAY59339.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|148720699|gb|ABR05324.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|253321512|gb|ACT26115.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|308216441|gb|EFO75840.1| hypothetical protein TMAG_00899 [Mycobacterium tuberculosis SUMu001]
 gi|308325311|gb|EFP14162.1| hypothetical protein TMBG_01652 [Mycobacterium tuberculosis SUMu002]
 gi|308335354|gb|EFP24205.1| hypothetical protein TMDG_03567 [Mycobacterium tuberculosis SUMu004]
 gi|308355291|gb|EFP44142.1| hypothetical protein TMIG_03522 [Mycobacterium tuberculosis SUMu009]
 gi|308359337|gb|EFP48188.1| hypothetical protein TMJG_02630 [Mycobacterium tuberculosis SUMu010]
 gi|308363244|gb|EFP52095.1| hypothetical protein TMKG_03676 [Mycobacterium tuberculosis SUMu011]
 gi|308366901|gb|EFP55752.1| hypothetical protein TMLG_01664 [Mycobacterium tuberculosis SUMu012]
Length=320

 Score =  534 bits (1375),  Expect = 7e-150, Method: Compositional matrix adjust.
 Identities = 266/266 (100%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  55   VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  114

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  115  VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  174

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  175  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  234

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  235  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  294

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  295  GMTQLSVNTGLAPGPLLGDGQLHERA  320


>gi|308374145|ref|ZP_07435048.2| hypothetical protein TMFG_02779 [Mycobacterium tuberculosis SUMu006]
 gi|308342838|gb|EFP31689.1| hypothetical protein TMFG_02779 [Mycobacterium tuberculosis SUMu006]
Length=317

 Score =  533 bits (1374),  Expect = 8e-150, Method: Compositional matrix adjust.
 Identities = 266/266 (100%), Positives = 266/266 (100%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  52   VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  111

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  112  VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  171

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  172  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  231

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  232  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  291

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  292  GMTQLSVNTGLAPGPLLGDGQLHERA  317


>gi|121636889|ref|YP_977112.1| hypothetical protein BCG_1017c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224989360|ref|YP_002644047.1| hypothetical protein JTY_0988 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|121492536|emb|CAL71004.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|224772473|dbj|BAH25279.1| hypothetical protein JTY_0988 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|341600905|emb|CCC63576.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=266

 Score =  533 bits (1372),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 264/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            +LQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  1    MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLL DGQLHERA
Sbjct  241  GMTQLSVNTGLAPGPLLSDGQLHERA  266


>gi|289761098|ref|ZP_06520476.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|289708604|gb|EFD72620.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
Length=266

 Score =  533 bits (1372),  Expect = 1e-149, Method: Compositional matrix adjust.
 Identities = 264/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            +LQRELTRLQNGWLSRDGVWHTDTD LADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  1    MLQRELTRLQNGWLSRDGVWHTDTDNLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266


>gi|298524456|ref|ZP_07011865.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|298494250|gb|EFI29544.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
Length=266

 Score =  532 bits (1370),  Expect = 2e-149, Method: Compositional matrix adjust.
 Identities = 264/266 (99%), Positives = 265/266 (99%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            +LQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA
Sbjct  1    MLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVG VDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA
Sbjct  61   VGVGGVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL
Sbjct  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP
Sbjct  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266


>gi|340625976|ref|YP_004744428.1| hypothetical protein MCAN_09671 [Mycobacterium canettii CIPT 
140010059]
 gi|340004166|emb|CCC43304.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=269

 Score =  483 bits (1244),  Expect = 1e-134, Method: Compositional matrix adjust.
 Identities = 244/268 (92%), Positives = 254/268 (95%), Gaps = 2/268 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLA--AHPGTSLILLDTASDPRKVL  58
            +LQREL RLQNGWL  +GVWHT+ DKLADL+AL+ TLA  A+ G SLILLD  SDPRKVL
Sbjct  1    MLQRELARLQNGWLDGNGVWHTNPDKLADLQALQRTLADPANRGASLILLDAVSDPRKVL  60

Query  59   AAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVAS  118
            AAVGVGDVDNAERVGVT+GGLNTRVSSSVGDMVKEAGIQR KAAELRERAG PNYDAVAS
Sbjct  61   AAVGVGDVDNAERVGVTVGGLNTRVSSSVGDMVKEAGIQRGKAAELRERAGLPNYDAVAS  120

Query  119  IAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSL  178
            IAWLGYDAPDGLKDVMHDWSARDAAGPLNRF KGLAATTNVSDQHITAFGHSYGSLVTSL
Sbjct  121  IAWLGYDAPDGLKDVMHDWSARDAAGPLNRFYKGLAATTNVSDQHITAFGHSYGSLVTSL  180

Query  179  ALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQD  238
            ALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVA+TIPEFGAFGSAPQD
Sbjct  181  ALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVADTIPEFGAFGSAPQD  240

Query  239  VPGMTQLSVNTGLAPGPLLGDGQLHERA  266
            VPGMTQLSVNTGLAPGP+LGDG+LHERA
Sbjct  241  VPGMTQLSVNTGLAPGPVLGDGRLHERA  268


>gi|289446536|ref|ZP_06436280.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289419494|gb|EFD16695.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=219

 Score =  442 bits (1136),  Expect = 3e-122, Method: Compositional matrix adjust.
 Identities = 218/219 (99%), Positives = 219/219 (100%), Gaps = 0/219 (0%)

Query  48   LDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRER  107
            +DTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRER
Sbjct  1    MDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRER  60

Query  108  AGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAF  167
            AGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAF
Sbjct  61   AGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAF  120

Query  168  GHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIP  227
            GHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIP
Sbjct  121  GHSYGSLVTSLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIP  180

Query  228  EFGAFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHERA  266
            EFGAFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  181  EFGAFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHERA  219


>gi|240169358|ref|ZP_04748017.1| hypothetical protein MkanA1_08596 [Mycobacterium kansasii ATCC 
12478]
Length=546

 Score =  424 bits (1089),  Expect = 8e-117, Method: Compositional matrix adjust.
 Identities = 211/266 (80%), Positives = 237/266 (90%), Gaps = 0/266 (0%)

Query  1    VLQRELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAA  60
            VLQREL RLQ GWL  +G+WHTDT+KLADL+AL+  L  +PG+SLILLDTAS+ RKVLAA
Sbjct  219  VLQRELDRLQRGWLDGNGLWHTDTEKLADLQALQRALTNNPGSSLILLDTASNSRKVLAA  278

Query  61   VGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIA  120
            VGVGDVDNA+RVGVT+GGLNTRVSSSV  M++EA +Q+ KA++LR  AG PNYDAVASIA
Sbjct  279  VGVGDVDNAQRVGVTVGGLNTRVSSSVEAMLREAQVQQGKASDLRRLAGAPNYDAVASIA  338

Query  121  WLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
            WLGYDAPD LKDV HDWSARDAAGPLNRF KG+AA +NV+DQHITAFGHSYGSLVTSLAL
Sbjct  339  WLGYDAPDSLKDVTHDWSARDAAGPLNRFYKGIAAGSNVADQHITAFGHSYGSLVTSLAL  398

Query  181  QQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
            QQGAPVSDVVLYGSPGTELT+ASQLGV+PGHA+YMIGVND V+  IPEFGAFG+APQDVP
Sbjct  399  QQGAPVSDVVLYGSPGTELTNASQLGVQPGHAYYMIGVNDDVSQVIPEFGAFGAAPQDVP  458

Query  241  GMTQLSVNTGLAPGPLLGDGQLHERA  266
            GMT+LS +TGLA G   GDG LHERA
Sbjct  459  GMTELSTSTGLALGGRYGDGNLHERA  484


>gi|254363887|ref|ZP_04979933.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|134149401|gb|EBA41446.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
Length=210

 Score =  423 bits (1087),  Expect = 1e-116, Method: Compositional matrix adjust.
 Identities = 209/210 (99%), Positives = 210/210 (100%), Gaps = 0/210 (0%)

Query  57   VLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAV  116
            +LAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAV
Sbjct  1    MLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAV  60

Query  117  ASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVT  176
            ASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVT
Sbjct  61   ASIAWLGYDAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVT  120

Query  177  SLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAP  236
            SLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAP
Sbjct  121  SLALQQGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAP  180

Query  237  QDVPGMTQLSVNTGLAPGPLLGDGQLHERA  266
            QDVPGMTQLSVNTGLAPGPLLGDGQLHERA
Sbjct  181  QDVPGMTQLSVNTGLAPGPLLGDGQLHERA  210


>gi|226304390|ref|YP_002764348.1| hypothetical protein RER_09010 [Rhodococcus erythropolis PR4]
 gi|226183505|dbj|BAH31609.1| conserved hypothetical protein [Rhodococcus erythropolis PR4]
Length=473

 Score =  146 bits (368),  Expect = 4e-33, Method: Compositional matrix adjust.
 Identities = 109/262 (42%), Positives = 133/262 (51%), Gaps = 27/262 (10%)

Query  18   GVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMG  77
            G W+ +  KL DL AL +   A P   L+L+D  S  R   AA+ +GD D A+ + VT+ 
Sbjct  190  GQWYAER-KLEDLDALDELFRAEPCRRLLLMDMRSGERG-FAAIAIGDPDTADHISVTIP  247

Query  78   GLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLK------  131
            GLNT V  S+  MV EA   RA+A    E AG    ++VA+IAW+GYDAP  +       
Sbjct  248  GLNTNVKDSMRGMVGEATRLRAEAMHQLELAG--RKESVATIAWIGYDAPQVIGPGKFDI  305

Query  132  -----DVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQGAP-  185
                 DV     A  AA  L  F  GL A +     HITA GHSYGSL TSLALQ+GA  
Sbjct  306  GRASFDVSRSSKAGIAADALGSFFHGLRAASVNDRVHITALGHSYGSLATSLALQRGASA  365

Query  186  -VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVPGMTQ  244
             V DVV YGSPG      S LG+   H + M    D +A     FG FG  P       +
Sbjct  366  AVDDVVFYGSPGVRAKVESDLGIADRHVYVMKAEGDSIAG----FGRFGGDPTRTE-FHR  420

Query  245  LSVNTGLAPGPLLGDGQLHERA  266
            LS   G+ P     DG  HERA
Sbjct  421  LSTAEGITP-----DGVKHERA  437


>gi|229494524|ref|ZP_04388287.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
 gi|229318886|gb|EEN84744.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=473

 Score =  144 bits (364),  Expect = 1e-32, Method: Compositional matrix adjust.
 Identities = 109/262 (42%), Positives = 133/262 (51%), Gaps = 27/262 (10%)

Query  18   GVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMG  77
            G W+ +  KL DL AL +   A P   L+L+D  S  R   AA+ VGD D A+ + VT+ 
Sbjct  190  GQWYAER-KLEDLDALDELFRAEPDRRLLLMDMRSGERG-FAAIAVGDPDTADHISVTIP  247

Query  78   GLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLK------  131
            GLNT V  S+  MV EA   RA+A    E AG    ++VA+IAW+GYDAP  +       
Sbjct  248  GLNTNVEDSMRGMVGEATRLRAEAMRQLELAG--RKESVATIAWIGYDAPQVIGPGKFDI  305

Query  132  -----DVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQGAP-  185
                 DV     A  AA  L  F  GL + +     HITA GHSYGSL TSLALQ+GA  
Sbjct  306  GRASFDVSRSSKAGIAADALGSFFHGLRSASVNDGVHITALGHSYGSLATSLALQRGASA  365

Query  186  -VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVPGMTQ  244
             V DVV YGSPG      S LG+   H + M    D +A     FG FG  P       +
Sbjct  366  AVDDVVFYGSPGVRAKVESDLGIADRHVYVMKAEGDSIAG----FGRFGGDPTRTE-FHR  420

Query  245  LSVNTGLAPGPLLGDGQLHERA  266
            LS   G+ P     DG  HERA
Sbjct  421  LSTAEGITP-----DGVKHERA  437


>gi|317509263|ref|ZP_07966884.1| hypothetical protein HMPREF9336_03256 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316252473|gb|EFV11922.1| hypothetical protein HMPREF9336_03256 [Segniliparus rugosus ATCC 
BAA-974]
Length=486

 Score =  143 bits (360),  Expect = 3e-32, Method: Compositional matrix adjust.
 Identities = 105/298 (36%), Positives = 153/298 (52%), Gaps = 41/298 (13%)

Query  2    LQRELT--RLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLA  59
            L+REL   +    +  +D        KL  L A+  +LAAHP   L+LLD +S  R   A
Sbjct  160  LRRELAADKFHGAFNDKDSDLFYAERKLEGLAAVERSLAAHPEAKLLLLDMSSGERGK-A  218

Query  60   AVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASI  119
            A+ +GD D A+ + +T  G+N+    ++  MV EA   +++   +  + G  + ++VASI
Sbjct  219  AIAIGDPDTADHISITTPGINSSPGQTLTGMVDEAAKLKSEGETILRKQG--SDESVASI  276

Query  120  AWLGYDAPD-----------------GLKDVMHDWSARDAAGPLNRFDKGLAAT------  156
            AW+GYD P                  G+ ++  D  AR  +    RF +GLAA       
Sbjct  277  AWIGYDPPQFNWEGTNPGPGWGDELKGVYELSQDSRARAGSESFARFCQGLAAVWRPAAD  336

Query  157  TNVSDQHITAFGHSYGSLVTSLALQQ--GAPVSDVVLYGSPGTELTHAS---QLGVEPGH  211
            ++     IT  GHSYGSLV SLALQQ     VS+ V YGSPG ++T  +   QLG+ P H
Sbjct  337  SSAQRPDITVLGHSYGSLVVSLALQQLPKGTVSNAVFYGSPGIDMTETADPDQLGLAPNH  396

Query  212  AFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHERA  266
            AF +   +D +   IPE+G   A+G  P   P + +LS + G+     +GDG  HERA
Sbjct  397  AFVLESDDDPI-RRIPEWGPRIAYGGFPTTFPWIVRLSTHEGVG----VGDGLRHERA  449


>gi|296395288|ref|YP_003660172.1| hypothetical protein Srot_2912 [Segniliparus rotundus DSM 44985]
 gi|296182435|gb|ADG99341.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=431

 Score =  139 bits (349),  Expect = 5e-31, Method: Compositional matrix adjust.
 Identities = 103/298 (35%), Positives = 151/298 (51%), Gaps = 41/298 (13%)

Query  2    LQRELT--RLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLA  59
            +QREL+  +    +  +     +   K+  L A++  LAAHP   L+LLD  +  R   A
Sbjct  105  IQRELSADKFHGAFNDKAAALFSAERKIEGLEAVQRALAAHPDAKLLLLDMGAGERG-RA  163

Query  60   AVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASI  119
            A+ +GD D AE + +T  G+N+    ++  MV EA   +++   +  + G P   +VAS+
Sbjct  164  AIAIGDPDTAEHLSITTPGINSSPGQTLTGMVDEAAKLKSEGEAILRKQGSPG--SVASV  221

Query  120  AWLGYDAPD-----------------GLKDVMHDWSARDAAGPLNRFDKGLAAT------  156
            AW+GYD P                  GL ++  D  AR  +    RF +GLAA       
Sbjct  222  AWIGYDPPQFKWEGSNPGPGWADELKGLFELSQDTRARRGSESFARFCQGLAAVWRPAPD  281

Query  157  TNVSDQHITAFGHSYGSLVTSLALQQ--GAPVSDVVLYGSPGTELT---HASQLGVEPGH  211
            ++    +IT  GHSYGSLV SLALQQ     V + V YGSPG ++T   +A QLG+ PGH
Sbjct  282  SSAMRPNITVLGHSYGSLVVSLALQQLPKGVVDNAVFYGSPGIDMTETGNAGQLGLGPGH  341

Query  212  AFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHERA  266
            AF +   +D +   IP +G   A+G  P   P + +LS + G  P    GDG  H+ A
Sbjct  342  AFVLQSDDDPI-QRIPGWGPMIAYGGFPTAFPWVVRLSTHAGEGP----GDGVFHDAA  394


>gi|296393635|ref|YP_003658519.1| hypothetical protein Srot_1217 [Segniliparus rotundus DSM 44985]
 gi|296180782|gb|ADG97688.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=532

 Score =  137 bits (344),  Expect = 2e-30, Method: Compositional matrix adjust.
 Identities = 105/292 (36%), Positives = 142/292 (49%), Gaps = 45/292 (15%)

Query  2    LQRELTRLQNGWLSRDG---VWHTDTD------KLADLRALRDTLAAHPGTSLILLDTAS  52
            LQ E+ RLQ    S  G     +TD+D      +L   +A+   L  + GT L++ D   
Sbjct  183  LQAEVDRLQKKLDSEFGHGKFSNTDSDLWYAQRRLEGAKAVERALRDNKGTKLMVFDPDY  242

Query  53   DPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPN  112
              R   AA+  G+ D A+ + VT  G+N+    S+ DM KEA   + +   +    G  N
Sbjct  243  GERG-RAAIATGEPDTADHISVTTPGVNSSPGQSIVDMTKEAEALKRETETVLNSNGHGN  301

Query  113  YDAVASIAWLGY------------------------DAPDGLKDVMHDWSARDAAGPLNR  148
             + V++IAW+GY                        D P GL DV  D  A+  A  L+ 
Sbjct  302  -ETVSTIAWIGYEPPQAQLDPHHLDKTGDVGPGGLGDEPGGLSDVSSDAKAKAGASSLSS  360

Query  149  FDKGLAATTN------VSDQHITAFGHSYGSLVTSLALQQGAP--VSDVVLYGSPGTELT  200
            F +GL A  +       +  HITA GHSYGSL TSLALQQ  P  V + V YGSPG EL 
Sbjct  361  FYEGLNAAWHPESGDAQTSPHITALGHSYGSLTTSLALQQTMPGVVDNAVFYGSPGLELP  420

Query  201  HASQLGVEPGHAFYMIGVND--HVANTIPEFGAFGSAPQDVPGMTQLSVNTG  250
               +L V  GHAF M   ND  H    + ++GA+G  P D PG+T+LS + G
Sbjct  421  SVDRLPVAAGHAFAMQADNDPIHYVPDVFKYGAYGPNPTDTPGITRLSTHAG  472


>gi|183981926|ref|YP_001850217.1| hypothetical protein MMAR_1913 [Mycobacterium marinum M]
 gi|183175252|gb|ACC40362.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=562

 Score =  135 bits (339),  Expect = 7e-30, Method: Compositional matrix adjust.
 Identities = 99/253 (40%), Positives = 133/253 (53%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L DL A+   L   P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGDLDAVDQALRNAPETYLAQLRVPDDPHQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   +++     + AG P   +VA+IAW+GY+ P    D          M 
Sbjct  310  GTLPGMVTEARNLQSEEMRQLKNAGKPT--SVAAIAWMGYEPPPNPLDTATAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  AR  AG L+R+ + + A  N    H+T  GHSYGSL  SLALQ     GA PV+DVV
Sbjct  368  DGQARAGAGDLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLNAHGAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG+E GHA+ M   +D +   +        +G  P   PG+T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLEHGHAYVMQAPHDLITGVVAPLAPLHGWGPDPYLTPGLTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|317507796|ref|ZP_07965498.1| hypothetical protein HMPREF9336_01870 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316253915|gb|EFV13283.1| hypothetical protein HMPREF9336_01870 [Segniliparus rugosus ATCC 
BAA-974]
Length=586

 Score =  134 bits (336),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 102/301 (34%), Positives = 149/301 (50%), Gaps = 41/301 (13%)

Query  2    LQRELTRLQNGW---LSRDGVWHTDTD------KLADLRALRDTLAAHPGTSLILLDTAS  52
            LQ E+ RLQ        +    +TD+D      +L   +A++ +L  +   + +++    
Sbjct  241  LQAEVDRLQKKLDDEFGQGKFSNTDSDLWYAQRRLEGAKAVQQSLDKYGDNAKLMVLDPD  300

Query  53   DPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPN  112
               +  AA+ +GD D A+ + VT  G+N+    S+  M  EA   + +   + ER G  N
Sbjct  301  YGMRGRAAIAMGDPDTADHISVTTPGVNSSPGQSIAGMTDEAAALKGETERVLERNGRGN  360

Query  113  YDAVASIAWLGY---------------------DAPDGLKDVMHDWSARDAAGPLNRFDK  151
             + V++IAW+GY                     D P GL DV  D  A+  A  L+ F +
Sbjct  361  -ETVSTIAWIGYEPPQASLDGNNSDQIGPGGWRDEPGGLADVSSDAKAKIGAASLSSFYE  419

Query  152  GLAATTNVSD------QHITAFGHSYGSLVTSLALQQ--GAPVSDVVLYGSPGTELTHAS  203
            GL+A  + +D       HITA GHSYGSL TSLALQQ     V + V YGSPG EL+   
Sbjct  420  GLSAAWHPADGDSSTNPHITAVGHSYGSLTTSLALQQMQTGVVDNAVFYGSPGLELSSPD  479

Query  204  QLGVEPGHAFYMIGVNDHVANTIPEF-GAFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQL  262
            QL V  GHA+ M   NDH+A  +P++   +G  P D PG+T+LS + G   G     G +
Sbjct  480  QLPVPAGHAYAMQADNDHIA-IVPDYTNHYGPNPTDTPGITRLSTHAGDTTGDAAPGGAV  538

Query  263  H  263
            H
Sbjct  539  H  539


>gi|296393168|ref|YP_003658052.1| hypothetical protein Srot_0741 [Segniliparus rotundus DSM 44985]
 gi|296180315|gb|ADG97221.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=351

 Score =  134 bits (336),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 108/289 (38%), Positives = 136/289 (48%), Gaps = 43/289 (14%)

Query  8    RLQNGWLSR--DGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGD  65
            R   GW       +W+    KL DL A+   LA HPG  L+ LD  +  R   AAV VGD
Sbjct  39   RRWEGWFDNCDSDLWYAQR-KLEDLDAIEQALAEHPGAQLVFLDMRTGARGK-AAVAVGD  96

Query  66   VDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYD  125
            VD A+R+ + + G+NT    S+ DM +EA   R  AA +    G  + + VA  AW+GY+
Sbjct  97   VDTADRISIAVPGMNTTPGRSMVDMAREAKALRDCAATILRNEG--SAETVACAAWIGYE  154

Query  126  APDGLKDVMHDWSARDAAG----------------------PLNRFDKGL--AATTNVSD  161
             P    D+    S R   G                       L RF      AAT     
Sbjct  155  TPHAELDLKMMQSRRFGPGWGDGAVGALRLLSVAHAKRGAVDLARFVGSFRHAATQGAHR  214

Query  162  QHITAFGHSYGSLVTSLALQ---QGAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGV  218
              ITA GHSYGSL TSLALQ   +GA V DVV +GSPG +   A QL VEPGH F M  V
Sbjct  215  PAITALGHSYGSLTTSLALQSLPRGA-VQDVVFFGSPGIKAGSAEQLRVEPGHVFAMQAV  273

Query  219  NDHVANTIPEFGAFGSAP-QDVPGMTQLSVNTGLAPGPLLGDGQLHERA  266
             D +      F    SAP  + P + +L+    + P    GDGQ H+ A
Sbjct  274  GDMIRKVNRWF----SAPVVEAPWIQRLATRAAVGP----GDGQAHDSA  314


>gi|296392493|ref|YP_003657377.1| hypothetical protein Srot_0053 [Segniliparus rotundus DSM 44985]
 gi|296179640|gb|ADG96546.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=586

 Score =  134 bits (336),  Expect = 2e-29, Method: Compositional matrix adjust.
 Identities = 101/291 (35%), Positives = 146/291 (51%), Gaps = 45/291 (15%)

Query  2    LQRELTRLQNGWLSRDG---VWHTDTD------KLADLRALRDTLAAHPGTSLILLDTAS  52
            LQ E+ RLQ    S  G     +TD+D      +L  L+A    L  +PGT L++LD   
Sbjct  239  LQAEVDRLQKQLDSEFGHGAFSNTDSDLWYAQRRLEGLQATEKALRDNPGTKLLVLDPDY  298

Query  53   DPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPN  112
              R  +A +G GD D A  + ++  G+N+    S+G+M KEA   + +   + +  G  N
Sbjct  299  GTRGRVA-IGTGDPDTANHISISTPGVNSSPGQSIGEMTKEAVALKTETENVLKANGHGN  357

Query  113  YDAVASIAWLGY------------------------DAPDGLKDVMHDWSARDAAGPLNR  148
             + V++I+W+GY                        D P GL DV  D  A+  A  L++
Sbjct  358  -ETVSTISWIGYEPPQAQLDPQHLDKTGDVGPGGLRDEPGGLSDVASDAKAKAGAASLSQ  416

Query  149  FDKGLAATTNVSD------QHITAFGHSYGSLVTSLALQQGAP--VSDVVLYGSPGTELT  200
            F +G++A  + +D       HITA GHSYGSL TSLALQQ     V + V YGSPG EL 
Sbjct  417  FYEGISAAWHPADGDSATSPHITALGHSYGSLTTSLALQQTQTGVVDNAVFYGSPGLELP  476

Query  201  HASQLGVEPGHAFYMIGVNDHVANTIPEFGA-FGSAPQDVPGMTQLSVNTG  250
               +L V  GHA+ M   +D + N +P     +G  P ++PG+T+LS   G
Sbjct  477  SLDRLPVATGHAYSMQAPSDPI-NYVPNLTEHYGPNPVEIPGITRLSTEAG  526


>gi|306785609|ref|ZP_07423931.1| hypothetical protein TMCG_02042 [Mycobacterium tuberculosis SUMu003]
 gi|308329719|gb|EFP18570.1| hypothetical protein TMCG_02042 [Mycobacterium tuberculosis SUMu003]
Length=508

 Score =  130 bits (327),  Expect = 2e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 131/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +        +G  P   PG T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|307085494|ref|ZP_07494607.1| hypothetical protein TMLG_02511 [Mycobacterium tuberculosis SUMu012]
 gi|308365018|gb|EFP53869.1| hypothetical protein TMLG_02511 [Mycobacterium tuberculosis SUMu012]
Length=523

 Score =  130 bits (326),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 131/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +        +G  P   PG T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|254775904|ref|ZP_05217420.1| hypothetical protein MaviaA2_14710 [Mycobacterium avium subsp. 
avium ATCC 25291]
Length=633

 Score =  130 bits (326),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/274 (36%), Positives = 129/274 (48%), Gaps = 36/274 (13%)

Query  13   WLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERV  72
            W S+       +  L DL+A+   +   P   L+LLDT +  ++  AA+ VGD D +  V
Sbjct  314  WKSQYDAARDGSKYLPDLQAVDKAVKMSPDRKLMLLDTKTG-KQARAAIAVGDPDTSTHV  372

Query  73   GVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWP--NYDAVASIAWLGYDAPD--  128
             VT  GLNT V  ++G M  EA   R ++  LR+ +  P   +D  ++IAW+GYD P   
Sbjct  373  SVTAPGLNTTVHGAIGSMADEA--TRVRSEALRQLSLTPGHEHDTASAIAWIGYDPPQVP  430

Query  129  ----------GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSL  178
                      G  DV HD  AR  A  L RF  G+ A  +     +TA GHSYGSL T L
Sbjct  431  GFDDIGKSLTGGWDVTHDAVARAGAHDLARFYDGIQAAHHGGPADLTAIGHSYGSLTTGL  490

Query  179  ALQQGAP--VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVND---------HVANTIP  227
            ALQ+     VS  + YGSPG E +   QL ++PGH + M   +D          V   IP
Sbjct  491  ALQEPGDHGVSRALFYGSPGIEASTPQQLHLQPGHVYAMETPDDPIQGVYDLRAVTQGIP  550

Query  228  --------EFGAFGSAPQDVPGMTQLSVNTGLAP  253
                    EFG FG  P   P  T L+      P
Sbjct  551  IVGSYANEEFGNFGDNPATNPNFTHLATGVATVP  584


>gi|15842335|ref|NP_337372.1| hypothetical protein MT2866 [Mycobacterium tuberculosis CDC1551]
 gi|13882631|gb|AAK47186.1| hypothetical protein MT2866 [Mycobacterium tuberculosis CDC1551]
Length=562

 Score =  129 bits (325),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 130/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAF---GSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +         G  P   PG T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|339295646|gb|AEJ47757.1| hypothetical protein CCDC5079_2567 [Mycobacterium tuberculosis 
CCDC5079]
 gi|339299263|gb|AEJ51373.1| hypothetical protein CCDC5180_2536 [Mycobacterium tuberculosis 
CCDC5180]
Length=558

 Score =  129 bits (325),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 131/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  246  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  305

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  306  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  363

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  364  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  421

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +        +G  P   PG T+LS 
Sbjct  422  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  481

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  482  QAGFDPGGIWRDG  494


>gi|289575495|ref|ZP_06455722.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289539926|gb|EFD44504.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length=562

 Score =  129 bits (325),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 130/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAF---GSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +         G  P   PG T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|289758923|ref|ZP_06518301.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289714487|gb|EFD78499.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length=526

 Score =  129 bits (325),  Expect = 3e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 130/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  214  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  273

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  274  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  331

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  332  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  389

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAF---GSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +         G  P   PG T+LS 
Sbjct  390  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  449

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  450  QAGFDPGGIWRDG  462


>gi|15609934|ref|NP_217313.1| hypothetical protein Rv2797c [Mycobacterium tuberculosis H37Rv]
 gi|31793973|ref|NP_856466.1| hypothetical protein Mb2820c [Mycobacterium bovis AF2122/97]
 gi|121638677|ref|YP_978901.1| hypothetical protein BCG_2815c [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 56 more sequence titles
 
gi|148662639|ref|YP_001284162.1| hypothetical protein MRA_2821 [Mycobacterium tuberculosis H37Ra]
 gi|148823985|ref|YP_001288739.1| hypothetical protein TBFG_12810 [Mycobacterium tuberculosis F11]
 gi|167967633|ref|ZP_02549910.1| hypothetical protein MtubH3_06191 [Mycobacterium tuberculosis 
H37Ra]
 gi|224991169|ref|YP_002645858.1| hypothetical protein JTY_2809 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253798119|ref|YP_003031120.1| hypothetical protein TBMG_01177 [Mycobacterium tuberculosis KZN 
1435]
 gi|254365448|ref|ZP_04981493.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|289553416|ref|ZP_06442626.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289570976|ref|ZP_06451203.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289746600|ref|ZP_06505978.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289754903|ref|ZP_06514281.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289762971|ref|ZP_06522349.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|294994109|ref|ZP_06799800.1| hypothetical protein Mtub2_06243 [Mycobacterium tuberculosis 
210]
 gi|297635408|ref|ZP_06953188.1| hypothetical protein MtubK4_14862 [Mycobacterium tuberculosis 
KZN 4207]
 gi|297732406|ref|ZP_06961524.1| hypothetical protein MtubKR_15017 [Mycobacterium tuberculosis 
KZN R506]
 gi|298526263|ref|ZP_07013672.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|306777078|ref|ZP_07415415.1| hypothetical protein TMAG_03179 [Mycobacterium tuberculosis SUMu001]
 gi|306780980|ref|ZP_07419317.1| hypothetical protein TMBG_02931 [Mycobacterium tuberculosis SUMu002]
 gi|306790203|ref|ZP_07428525.1| hypothetical protein TMDG_00507 [Mycobacterium tuberculosis SUMu004]
 gi|306794287|ref|ZP_07432589.1| hypothetical protein TMEG_03471 [Mycobacterium tuberculosis SUMu005]
 gi|306798705|ref|ZP_07437007.1| hypothetical protein TMFG_03692 [Mycobacterium tuberculosis SUMu006]
 gi|306804560|ref|ZP_07441228.1| hypothetical protein TMHG_01995 [Mycobacterium tuberculosis SUMu008]
 gi|306807400|ref|ZP_07444068.1| hypothetical protein TMGG_02074 [Mycobacterium tuberculosis SUMu007]
 gi|306968859|ref|ZP_07481520.1| hypothetical protein TMIG_02295 [Mycobacterium tuberculosis SUMu009]
 gi|306973193|ref|ZP_07485854.1| hypothetical protein TMJG_01781 [Mycobacterium tuberculosis SUMu010]
 gi|307080902|ref|ZP_07490072.1| hypothetical protein TMKG_03225 [Mycobacterium tuberculosis SUMu011]
 gi|313659738|ref|ZP_07816618.1| hypothetical protein MtubKV_15017 [Mycobacterium tuberculosis 
KZN V2475]
 gi|339632808|ref|YP_004724450.1| hypothetical protein MAF_28020 [Mycobacterium africanum GM041182]
 gi|1648924|emb|CAB03649.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|31619567|emb|CAD95005.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494325|emb|CAL72803.1| Conserved hypothetical protein [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|134150961|gb|EBA43006.1| conserved hypothetical protein [Mycobacterium tuberculosis str. 
Haarlem]
 gi|148506791|gb|ABQ74600.1| hypothetical protein MRA_2821 [Mycobacterium tuberculosis H37Ra]
 gi|148722512|gb|ABR07137.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774284|dbj|BAH27090.1| hypothetical protein JTY_2809 [Mycobacterium bovis BCG str. Tokyo 
172]
 gi|253319622|gb|ACT24225.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
1435]
 gi|289438048|gb|EFD20541.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
605]
 gi|289544730|gb|EFD48378.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289687128|gb|EFD54616.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
 gi|289695490|gb|EFD62919.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
 gi|289710477|gb|EFD74493.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 
1503]
 gi|298496057|gb|EFI31351.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308214587|gb|EFO73986.1| hypothetical protein TMAG_03179 [Mycobacterium tuberculosis SUMu001]
 gi|308326233|gb|EFP15084.1| hypothetical protein TMBG_02931 [Mycobacterium tuberculosis SUMu002]
 gi|308333396|gb|EFP22247.1| hypothetical protein TMDG_00507 [Mycobacterium tuberculosis SUMu004]
 gi|308337420|gb|EFP26271.1| hypothetical protein TMEG_03471 [Mycobacterium tuberculosis SUMu005]
 gi|308341085|gb|EFP29936.1| hypothetical protein TMFG_03692 [Mycobacterium tuberculosis SUMu006]
 gi|308346131|gb|EFP34982.1| hypothetical protein TMGG_02074 [Mycobacterium tuberculosis SUMu007]
 gi|308348890|gb|EFP37741.1| hypothetical protein TMHG_01995 [Mycobacterium tuberculosis SUMu008]
 gi|308353610|gb|EFP42461.1| hypothetical protein TMIG_02295 [Mycobacterium tuberculosis SUMu009]
 gi|308357456|gb|EFP46307.1| hypothetical protein TMJG_01781 [Mycobacterium tuberculosis SUMu010]
 gi|308361405|gb|EFP50256.1| hypothetical protein TMKG_03225 [Mycobacterium tuberculosis SUMu011]
 gi|326904412|gb|EGE51345.1| hypothetical protein TBPG_02313 [Mycobacterium tuberculosis W-148]
 gi|328457892|gb|AEB03315.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 
4207]
 gi|339332164|emb|CCC27872.1| conserved hypothetical protein [Mycobacterium africanum GM041182]
 gi|341602715|emb|CCC65391.1| conserved hypothetical protein [Mycobacterium bovis BCG str. 
Moreau RDJ]
 gi|344220625|gb|AEN01256.1| hypothetical protein MTCTRI2_2850 [Mycobacterium tuberculosis 
CTRI-2]
Length=562

 Score =  129 bits (325),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 130/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAF---GSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +         G  P   PG T+LS 
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  485

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  486  QAGFDPGGIWRDG  498


>gi|323718643|gb|EGB27807.1| hypothetical protein TMMG_02803 [Mycobacterium tuberculosis CDC1551A]
Length=558

 Score =  129 bits (325),  Expect = 4e-28, Method: Compositional matrix adjust.
 Identities = 97/253 (39%), Positives = 131/253 (52%), Gaps = 22/253 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  246  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  305

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  306  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  363

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  364  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  421

Query  191  LYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFG---AFGSAPQDVPGMTQLSV  247
             YGSPG EL   +QLG++ GHA+ M   +D + N +        +G  P   PG T+LS 
Sbjct  422  FYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFTELSS  481

Query  248  NTGLAPGPLLGDG  260
              G  PG +  DG
Sbjct  482  QAGFDPGGIWRDG  494


>gi|333988787|ref|YP_004521401.1| hypothetical protein JDM601_0147 [Mycobacterium sp. JDM601]
 gi|333484755|gb|AEF34147.1| conserved hypothetical protein [Mycobacterium sp. JDM601]
Length=635

 Score =  127 bits (319),  Expect = 2e-27, Method: Compositional matrix adjust.
 Identities = 102/272 (38%), Positives = 129/272 (48%), Gaps = 41/272 (15%)

Query  15   SRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGV  74
            +RDG  +     L DL+A+   L   P   L+LLDT S   +  AA+ VGD D A  V V
Sbjct  325  ARDGAKY-----LPDLQAVDAALQVSPDRKLMLLDTESG-TQARAAIAVGDPDKATHVSV  378

Query  75   TMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWP--NYDAVASIAWLGYDAPD----  128
            T  GLNT V  ++G M  EA   R +A  LR+    P   +D+V++IAW+GYD P     
Sbjct  379  TAPGLNTTVHGAIGGMTDEATHVRGEA--LRQLGLSPGHEHDSVSAIAWIGYDPPQVPGF  436

Query  129  --------GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
                    G+  V HD  AR  A  L RF  G+ A+       +TA GHSYGSL T LAL
Sbjct  437  DDRGASLAGIWGVTHDDLARAGAHDLARFYDGIQASHLGGPADLTAIGHSYGSLTTGLAL  496

Query  181  QQGAP--VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHV---------ANTIP--  227
            Q+     VS  + YGSPG E     QL ++PG  F M   +D +            IP  
Sbjct  497  QEPGDHGVSRALFYGSPGIEAATPEQLHLQPGQVFAMEAPDDPIQWVYDARTFGQGIPIL  556

Query  228  ------EFGAFGSAPQDVPGMTQLSVNTGLAP  253
                  EFG FG  P   P  TQL+      P
Sbjct  557  GSYLNDEFGDFGPNPATNPNFTQLATGAATVP  588


>gi|296169825|ref|ZP_06851439.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
 gi|295895502|gb|EFG75202.1| conserved hypothetical protein [Mycobacterium parascrofulaceum 
ATCC BAA-614]
Length=646

 Score =  125 bits (314),  Expect = 6e-27, Method: Compositional matrix adjust.
 Identities = 91/224 (41%), Positives = 119/224 (54%), Gaps = 24/224 (10%)

Query  15   SRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGV  74
            +RDG  +     L DL+A+  T+ A P   L+LLDT +  ++  AA+ VGD D A  V V
Sbjct  321  ARDGAKY-----LPDLQAVDKTVKASPDRKLMLLDTKTG-KQARAAIAVGDPDTATHVSV  374

Query  75   TMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWP--NYDAVASIAWLGYDAPD----  128
            T  GLNT V  ++G MV EA   R +A  LR+    P   +D V++IAW+GYD P     
Sbjct  375  TTPGLNTTVHGAIGGMVSEATNARTEA--LRQLGLTPGHEHDTVSAIAWIGYDPPQVPGF  432

Query  129  --------GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLAL  180
                    G  DV HD  AR  A  L  F  G+ A  +     +TA GHSYGSL T LAL
Sbjct  433  DDIGKSLTGGWDVSHDAVARAGAHDLAGFYDGIQAAHHGGPADLTAIGHSYGSLTTGLAL  492

Query  181  QQGAP--VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHV  222
            Q+     VS  + YGSPG E +   QL ++PGH F M   +D +
Sbjct  493  QEPGDHGVSRALFYGSPGIEASTPQQLHLQPGHVFTMETPDDPI  536


>gi|240171302|ref|ZP_04749961.1| hypothetical protein MkanA1_18466 [Mycobacterium kansasii ATCC 
12478]
Length=562

 Score =  124 bits (312),  Expect = 1e-26, Method: Compositional matrix adjust.
 Identities = 99/255 (39%), Positives = 131/255 (52%), Gaps = 26/255 (10%)

Query  17   DGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVT  75
            DG       +LADL A+   L   P T L  L    DP ++VLAAV VG+ D A  V VT
Sbjct  241  DGQLSAAKGRLADLDAVDQALRNAPETYLAQLRIPDDPHQQVLAAVAVGNPDTAANVSVT  300

Query  76   MGGLNTRVSSSVGDMVKEA-GIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV-  133
            + G+ +    ++  MV EA  +QR +  +L   AG P   +VA+IAW+GY  P    D  
Sbjct  301  VPGVGSTTRGTLPGMVTEARNLQREEIRQLNA-AGKPA--SVATIAWMGYTPPPNPLDTG  357

Query  134  --------MHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQ---  182
                    M D  AR  A  L+++ + + A  N  + H+T  GHSYGSL  SLALQ    
Sbjct  358  SAGDLWQTMTDEQARAGAADLSKYLQQVRA--NNPNGHLTVLGHSYGSLTASLALQDLNA  415

Query  183  --GAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIG----VNDHVANTIPEFGAFGSAP  236
                PV+DVV YGSPG EL   +QLG++ G A+ M      + D VA   P  G +G  P
Sbjct  416  HGSHPVNDVVFYGSPGLELYSPAQLGLDHGQAYVMQAPHDLITDLVAPVAPLHG-WGPDP  474

Query  237  QDVPGMTQLSVNTGL  251
               PG+T+LS   G 
Sbjct  475  YLTPGLTELSSQAGF  489


>gi|296392595|ref|YP_003657479.1| hypothetical protein Srot_0159 [Segniliparus rotundus DSM 44985]
 gi|296179742|gb|ADG96648.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=583

 Score =  124 bits (311),  Expect = 2e-26, Method: Compositional matrix adjust.
 Identities = 108/287 (38%), Positives = 143/287 (50%), Gaps = 28/287 (9%)

Query  2    LQRELTRLQNGWLSRDG---VWHTDTDKLADLRALRDTLAAH-PGTSLILLDTASDPRKV  57
            LQREL     G    D    +W+    KL DL A+  +L  +     L++LD  S  R  
Sbjct  252  LQRELDSNPFGGAFSDKDAQLWYVKK-KLDDLDAIDRSLNQYGKDAKLLVLDMRSGERGK  310

Query  58   LAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVA  117
             AA+ +GD D A+ + VT  GL++ V  S+  MV EA   +++   +    G P  + V+
Sbjct  311  -AAIALGDPDTADHISVTTPGLDSSVGGSLNGMVGEASDLKSETERILRAQGKPG-ETVS  368

Query  118  SIAWLGYDAPD-----------GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSD-----  161
            +IAW+GY  P            G  DV  D  A+  A  L+RF +GL A  + SD     
Sbjct  369  TIAWIGYQCPHVDGPGWGDWARGGADVSQDTLAKAGAQDLSRFYQGLNAAWHPSDGRADT  428

Query  162  -QHITAFGHSYGSLVTSLALQQGAP--VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGV  218
               ITA GHSYGSL TSLALQQ  P  V + VLYGSPG E   A QL ++ GH F M G 
Sbjct  429  GPQITALGHSYGSLTTSLALQQTPPGVVQNAVLYGSPGIEADSAQQLHMQAGHIFAMQGD  488

Query  219  NDHVANTIPEFGAFGSAPQDVPGMTQLSVNTGLAPGPLL-GDGQLHE  264
             D +       G FG+ P     +T+LS + G+  G  L G G  HE
Sbjct  489  GDTI-KLAAGTGNFGADPSVQSWVTRLSTHEGITLGDSLDGIGVRHE  534


>gi|262200424|ref|YP_003271632.1| hypothetical protein Gbro_0405 [Gordonia bronchialis DSM 43247]
 gi|262083771|gb|ACY19739.1| protein of unknown function DUF1023 [Gordonia bronchialis DSM 
43247]
Length=469

 Score =  122 bits (305),  Expect = 7e-26, Method: Compositional matrix adjust.
 Identities = 85/244 (35%), Positives = 121/244 (50%), Gaps = 23/244 (9%)

Query  26   KLADLRALRDTL------AAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGL  79
            K+AD   L++ +        +P   ++L+   +   +  AA+ +G+ D+A+ + VT  G+
Sbjct  177  KIADAGKLKELMNQDAWSEINPNGRMLLVLDMTTGEQGKAAISIGNPDDADHIAVTTPGM  236

Query  80   NTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD-----------  128
            NT +  S+ DM+ E+   RA+     ERAG P    VA+I WL Y+ PD           
Sbjct  237  NTNIRGSMTDMLSESNALRAETVSQLERAGAPGQ-KVATITWLDYEPPDKGNTRPFADQY  295

Query  129  GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQ--GAPV  186
               + M    A   A  L RF   L AT+   D HI A GHSYGSL   LALQ+  G PV
Sbjct  296  SWAEAMQQDRAVVGARDLARFYNCLEATSTRDDPHIVALGHSYGSLTQGLALQESGGHPV  355

Query  187  SDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPE--FGAFGSAPQDVPGMTQ  244
             D V YGSPG E +   +LG+  GH + M G +D + +   +   G  G AP     + Q
Sbjct  356  DDAVFYGSPGFEASDEPELGLRQGHGYVMQGDDDDIRHVTSKGGVGPNGPAPTSTQ-LEQ  414

Query  245  LSVN  248
            L VN
Sbjct  415  LDVN  418


>gi|342858918|ref|ZP_08715572.1| hypothetical protein MCOL_08578 [Mycobacterium colombiense CECT 
3035]
 gi|342133159|gb|EGT86362.1| hypothetical protein MCOL_08578 [Mycobacterium colombiense CECT 
3035]
Length=646

 Score =  118 bits (296),  Expect = 7e-25, Method: Compositional matrix adjust.
 Identities = 93/271 (35%), Positives = 124/271 (46%), Gaps = 45/271 (16%)

Query  27   LADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSS  86
            L DL+A+   +   P   L+LLDT +  R+  AA+ VGD D +  V VT+ GLNT V  +
Sbjct  328  LPDLQAVDKAVRMSPDRKLMLLDTKTG-RQARAAIAVGDPDASTHVSVTVPGLNTTVHGA  386

Query  87   VGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD--GLKD----------VM  134
            +G M  EA   R++A      A    +D V++IAW+GYD P   G  D          V 
Sbjct  387  IGSMSDEATRLRSEALRQLSLAPGHEHDTVSAIAWIGYDPPQVPGFDDLGKSLAGGWGVS  446

Query  135  HDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQGAP--VSDVVLY  192
            HD  AR  A  L  F  G+ A  +     +TA GHSYGSL T LALQ+     +S  + Y
Sbjct  447  HDDIARAGAHDLAGFYDGIQAAHHGGPADLTAIGHSYGSLTTGLALQEPGDHGISRALFY  506

Query  193  GSPGTELTHASQLGVEPGHAFYMIGVNDH---------VANTIPEF--------------  229
            GSPG E +   QL ++PGH F M   +D          +A+T+  F              
Sbjct  507  GSPGIEASTPQQLHLQPGHVFTMETPDDPIQWTYDGPAIAHTVAPFLPPPLSTLAETVLG  566

Query  230  -------GAFGSAPQDVPGMTQLSVNTGLAP  253
                   G FG  P   P  T L+      P
Sbjct  567  AADATGAGHFGPNPATNPNFTHLATGAATVP  597


>gi|262202342|ref|YP_003273550.1| hypothetical protein Gbro_2415 [Gordonia bronchialis DSM 43247]
 gi|262085689|gb|ACY21657.1| protein of unknown function DUF1023 [Gordonia bronchialis DSM 
43247]
Length=557

 Score =  117 bits (294),  Expect = 1e-24, Method: Compositional matrix adjust.
 Identities = 86/245 (36%), Positives = 123/245 (51%), Gaps = 30/245 (12%)

Query  20   WHTDTD--------KLADLRALRDTLAAH-------PGTSLILLDTASDPRKVLAAVGVG  64
            W T+ D        K+AD+  L++ +  +        G  L+LLD  S   +  A V + 
Sbjct  259  WFTNEDAGLRQVCAKIADVEKLQELIGENSWSPQNPEGRMLLLLDMDSG-EQGKAVVAIA  317

Query  65   DVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGY  124
            + D+A+ V VT  G++T + +S    + E    R +A      AG  +  +V++I WLGY
Sbjct  318  NPDDADHVSVTTPGMDTNIRNSFAGAIGETESLRHEAYRQLRLAGR-DGQSVSTIMWLGY  376

Query  125  DAPDGLKDVMHDWS---------ARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLV  175
            + PD     +  WS         A + A  L  F +GL AT+N +D H+ AFGHSYGSL 
Sbjct  377  EPPDNRGSRLPGWSFLEVAQQDRATNGAPDLVAFYRGLDATSNKTDPHLVAFGHSYGSLT  436

Query  176  TSLALQQ--GAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVAN--TIPEFGA  231
              +ALQQ  G PV D   YGSPG E    ++LG+ PGH + M G  D +A   +   FG 
Sbjct  437  QGIALQQPGGHPVDDAAFYGSPGFEAGTEAELGLAPGHGYVMQGDRDWIAKFQSRRRFGL  496

Query  232  FGSAP  236
             G AP
Sbjct  497  NGPAP  501


>gi|134097612|ref|YP_001103273.1| hypothetical protein SACE_1016 [Saccharopolyspora erythraea NRRL 
2338]
 gi|291008469|ref|ZP_06566442.1| hypothetical protein SeryN2_28443 [Saccharopolyspora erythraea 
NRRL 2338]
 gi|133910235|emb|CAM00348.1| hypothetical protein SACE_1016 [Saccharopolyspora erythraea NRRL 
2338]
Length=566

 Score =  117 bits (292),  Expect = 2e-24, Method: Compositional matrix adjust.
 Identities = 86/266 (33%), Positives = 130/266 (49%), Gaps = 24/266 (9%)

Query  3    QRELTRLQNGWLSRDGVWHTD-------TDKLADLRALRDTLAAHPGTSLILLDTASDPR  55
            +RE    +   + R GV   +       T K+  + A+  TL   P   L++LD++ +  
Sbjct  250  EREALNAEKAEIERGGVSDDERKRLEEVTHKIESIGAVEKTLERQPSRQLLVLDSSGE--  307

Query  56   KVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDA  115
            ++ AAV VGDVD A+ V V   GLN+ V+ ++  +  +    RA++    +R G      
Sbjct  308  RLKAAVAVGDVDTADHVSVFTPGLNSTVNGTLEGLDHQMNQLRAQSQHESDRHGEGGQ--  365

Query  116  VASIAWLGYDAPDGLK-------DVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFG  168
            VA+I+W+GY+ P   +        V    +A +    LN F KG+ A+ + +D H+TA G
Sbjct  366  VAAISWIGYETPQDHEHAPWHENSVTRSDAAENGGAKLNEFFKGINASRD-TDPHLTALG  424

Query  169  HSYGSLVTSLALQQGAP-VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIP  227
            HSYGS  T  ALQ G   V D +++GSPG        L V  GH + +   ND VA+   
Sbjct  425  HSYGSTTTGYALQGGGHGVDDAIVFGSPGVGTDDVEDLHVPEGHTYRIEARNDPVAD---  481

Query  228  EFGAFGSAPQDVPGMTQLSVNTGLAP  253
             FG FG  P  + G+  LS      P
Sbjct  482  -FGRFGGDPTHMEGVQDLSAKESTEP  506


>gi|289448455|ref|ZP_06438199.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
 gi|289421413|gb|EFD18614.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
Length=281

 Score =  115 bits (287),  Expect = 9e-24, Method: Compositional matrix adjust.
 Identities = 86/221 (39%), Positives = 114/221 (52%), Gaps = 21/221 (9%)

Query  57   VLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAV  116
            +LAAV VG+ D A  V VT+ G+ +    ++  MV EA   R++       AG P   +V
Sbjct  1    MLAAVAVGNPDTAANVSVTVPGVGSTTRGALPGMVTEARDLRSEVIRQLNAAGKPA--SV  58

Query  117  ASIAWLGYDAPDGLKDV---------MHDWSARDAAGPLNRFDKGLAATTNVSDQHITAF  167
            A+IAW+GY  P    D          M D  A   A  L+R+ + + A  N    H+T  
Sbjct  59   ATIAWMGYHPPPNPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVRA--NNPSGHLTVL  116

Query  168  GHSYGSLVTSLALQ----QGA-PVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHV  222
            GHSYGSL  SLALQ    Q A PV+DVV YGSPG EL   +QLG++ GHA+ M   +D +
Sbjct  117  GHSYGSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLI  176

Query  223  ANTIPEFG---AFGSAPQDVPGMTQLSVNTGLAPGPLLGDG  260
             N +        +G  P   PG T+LS   G  PG +  DG
Sbjct  177  TNLVAPLAPLHGWGLDPYLTPGFTELSSQAGFDPGGIWRDG  217


>gi|111019228|ref|YP_702200.1| hypothetical protein RHA1_ro02235 [Rhodococcus jostii RHA1]
 gi|110818758|gb|ABG94042.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=555

 Score =  114 bits (285),  Expect = 1e-23, Method: Compositional matrix adjust.
 Identities = 96/258 (38%), Positives = 123/258 (48%), Gaps = 30/258 (11%)

Query  19   VWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGG  78
            +W+ +  KL DL  L   +  HP   L+LLD  S  R  +AA  +GD D A+ + VT  G
Sbjct  262  LWYAEQ-KLRDLDDLEKLVRDHPDGRLMLLDLQSGDR-TMAAFALGDPDTADHIAVTTPG  319

Query  79   LNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD----GLKDV-  133
            ++T  +S  G M +EA   RA+     + AG    D V++IAWLGY  P     G  DV 
Sbjct  320  IDTTAASLRG-MTEEAAALRAETERQLDLAGR-TSDTVSTIAWLGYQPPTTTGPGNYDVP  377

Query  134  -----------MHDW-SARDAAG--PLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLA  179
                       +  W S R  AG   L  F +GL   +   D HITA GHSYGS    LA
Sbjct  378  FIDQNLGRGWLLDSWQSDRATAGAPKLASFYEGLDVASQTPDPHITALGHSYGSYTQGLA  437

Query  180  LQQGA---PVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPE-FGAFGSA  235
            LQ      PV D V YGSPG +    S LG+ P H F M   +D +  T+ + FG  G  
Sbjct  438  LQHAGPRQPVDDAVFYGSPGFDANDESDLGLAPRHGFVMRAHDDPI--TVADGFGRLGPD  495

Query  236  PQDVPGMTQLSVNTGLAP  253
            P     + QLSV     P
Sbjct  496  PVQT-DLEQLSVREAATP  512


>gi|289444345|ref|ZP_06434089.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289417264|gb|EFD14504.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length=476

 Score =  113 bits (283),  Expect = 2e-23, Method: Compositional matrix adjust.
 Identities = 83/205 (41%), Positives = 111/205 (55%), Gaps = 19/205 (9%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDP-RKVLAAVGVGDVDNAERVGVTMGGLNTRVS  84
            +L +L A+ + L+  P T L  L    DP ++VLAAV VG+ D A  V VT+ G+ +   
Sbjct  250  RLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTR  309

Query  85   SSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDV---------MH  135
             ++  MV EA   R++       AG P   +VA+IAW+GY  P    D          M 
Sbjct  310  GALPGMVTEARDLRSEVIRQLNAAGKPA--SVATIAWMGYHPPPNPLDTGSAGDLWQTMT  367

Query  136  DWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ----QGA-PVSDVV  190
            D  A   A  L+R+ + + A  N    H+T  GHSYGSL  SLALQ    Q A PV+DVV
Sbjct  368  DGQAHAGAADLSRYLQQVRA--NNPSGHLTVLGHSYGSLTASLALQDLDAQSAHPVNDVV  425

Query  191  LYGSPGTELTHASQLGVEPGHAFYM  215
             YGSPG EL   +QLG++ GHA+ M
Sbjct  426  FYGSPGLELYSPAQLGLDHGHAYVM  450


>gi|226361364|ref|YP_002779142.1| hypothetical protein ROP_19500 [Rhodococcus opacus B4]
 gi|226239849|dbj|BAH50197.1| hypothetical protein [Rhodococcus opacus B4]
Length=549

 Score =  112 bits (280),  Expect = 6e-23, Method: Compositional matrix adjust.
 Identities = 94/257 (37%), Positives = 123/257 (48%), Gaps = 28/257 (10%)

Query  19   VWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGG  78
            +W+ +  KL DL  L + + AHP   L+LLD  S  R  +AA  +G+ D A+ + VT  G
Sbjct  256  LWYAEQ-KLRDLDNLEELVRAHPDGRLMLLDLQSGER-TMAAFALGNPDTADHISVTTPG  313

Query  79   LNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD----GLKDV-  133
            ++T V S  G M  EA   +A+     + +G  + D V++IAWLGY  P     G  DV 
Sbjct  314  IDTTVGSLAG-MADEATALKAEIERQLDLSGRTD-DTVSTIAWLGYQPPTTTGPGNFDVP  371

Query  134  -----------MHDW-SARDAAG--PLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLA  179
                       +  W S R  AG   L  F +GL   +   D HITA GHSYGS    LA
Sbjct  372  FIDQNLGRGWLVDSWQSDRATAGAPKLAAFYEGLDVASQTPDPHITALGHSYGSCTQGLA  431

Query  180  LQQGA---PVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAP  236
            LQ      PV D V YGSPG      S LG+  GH F M   +D + + +  FG  G  P
Sbjct  432  LQDAGPRQPVDDAVFYGSPGFHANDESDLGLARGHGFVMRAHDDPI-SVVDGFGRLGPDP  490

Query  237  QDVPGMTQLSVNTGLAP  253
                 + QLSV     P
Sbjct  491  VQT-DLEQLSVREASTP  506


>gi|317506264|ref|ZP_07964082.1| hypothetical protein HMPREF9336_00451 [Segniliparus rugosus ATCC 
BAA-974]
 gi|316255442|gb|EFV14694.1| hypothetical protein HMPREF9336_00451 [Segniliparus rugosus ATCC 
BAA-974]
Length=359

 Score =  108 bits (271),  Expect = 6e-22, Method: Compositional matrix adjust.
 Identities = 91/287 (32%), Positives = 122/287 (43%), Gaps = 45/287 (15%)

Query  12   GWLSRDG--VWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNA  69
            GW +     +W+    KL DL A+   LA HP   L+ LD     R   AA+ VGD+  A
Sbjct  45   GWFNNRASDLWYAQR-KLEDLAAIEQALAEHPEAQLVFLDMRFGARGK-AAIAVGDIGAA  102

Query  70   ERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDG  129
            +R+ V + G+NT    S+ DM +EA   R  A  +    G  + + VA + W+GY+ P  
Sbjct  103  DRISVAVPGMNTTPGRSMVDMAREANALRDCATAILRNQG--SGETVACVGWIGYETPHA  160

Query  130  LKDVMHDWS----------------------ARDAAGPLNRFDKGLAATTNVSDQH----  163
              D+    S                      AR  A  L RF  GL    +  + H    
Sbjct  161  ELDLSMMRSRRFGPGWGDGAVGALRLLSVGKARRGAVELARFLMGLGLLRHSPEGHADAP  220

Query  164  ----ITAFGHSYGSLVTSLALQQ--GAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIG  217
                +T  GHSYGSL  S ALQ      V DVV +GSPG +     QL +EPGH F M  
Sbjct  221  TKPALTVLGHSYGSLTASFALQSLPKGVVEDVVFFGSPGIKAKTVEQLHIEPGHVFAMQA  280

Query  218  VNDHVANTIPEFGAFGSAPQDVPGMTQLSVNTGLAPGPLLGDGQLHE  264
              D +       G F         + +LS    + P    GDGQ H+
Sbjct  281  EGDMIRRA---SGWFSDPVVQSWWIQRLSTRAAVGP----GDGQHHD  320


>gi|337768332|emb|CCB77045.1| conserved protein of unknown function [Streptomyces cattleya 
NRRL 8057]
Length=573

 Score =  107 bits (268),  Expect = 1e-21, Method: Compositional matrix adjust.
 Identities = 86/226 (39%), Positives = 110/226 (49%), Gaps = 18/226 (7%)

Query  6    LTRLQNGWLSRDG-VWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVG  64
            L++L+    S DG    +   K+  L+ L+ TL+ HPG+    L   SD     A V  G
Sbjct  260  LSKLKTDLSSADGSTAESLRAKIDGLQGLQQTLS-HPGSPRPYLLGLSDEGNGRAIVSFG  318

Query  65   DVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGY  124
            + D AE V   + GLNTR+         E     A+ A+         Y + ASI WLGY
Sbjct  319  NPDTAENVSAYVPGLNTRLDGHFASADVERARNIARMAQ--------KYGSTASITWLGY  370

Query  125  DAPD----GLKD--VMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSL  178
            DAP     GL D  VM D  A+  A   +R  +G+ AT +    HITA GHSYGSL    
Sbjct  371  DAPQLQGAGLDDLAVMSDGDAQRGAVAYDRLLQGIRATHDSGAPHITALGHSYGSLTVGQ  430

Query  179  ALQQ--GAPVSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHV  222
            A QQ  G P  DV+L GSPG  +  AS LG+  GH +     ND V
Sbjct  431  ASQQPGGLPADDVILVGSPGVGVDRASDLGLPAGHVYAAAAANDPV  476


>gi|118467794|ref|YP_890594.1| hypothetical protein MSMEG_6381 [Mycobacterium smegmatis str. 
MC2 155]
 gi|118169081|gb|ABK69977.1| conserved hypothetical protein [Mycobacterium smegmatis str. 
MC2 155]
Length=607

 Score =  105 bits (263),  Expect = 5e-21, Method: Compositional matrix adjust.
 Identities = 92/270 (35%), Positives = 132/270 (49%), Gaps = 46/270 (17%)

Query  26   KLADLRALRDTLAAH----PGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNT  81
            +L D +A++D L+      P   L+LL+   D R+  AA+ VG+ D AE V VT  G+ T
Sbjct  287  RLDDAKAMKDALSVDGKYDPNKYLMLLEFPED-REPRAAIAVGNPDTAEHVTVTTPGVGT  345

Query  82   RVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD---GLKDVMHDWS  138
            R   S+G MV EA   R +A    +RAG  + + VA+IAWLGY+ P     + +   +  
Sbjct  346  R-PESLGGMVSEADALRQEAQTQLDRAGR-SGEQVATIAWLGYEPPGTDISVAEAGFERR  403

Query  139  ARDAAGPLNRFDKGLAATTNV-SDQHITAFGHSYGSLVTSLALQ---QGAPVSDVVLYGS  194
            A +AA  L  F +G+ AT    SD H++AFGHSYGSL T+ AL    +   V D   YGS
Sbjct  404  ANEAAPDLADFYRGINATNEHGSDVHLSAFGHSYGSLTTAQALYELGETGVVDDAAFYGS  463

Query  195  PGTELTHASQLGVEP---------------------GHAFYMIGVNDHVA-----NTIP-  227
            PG   T +++  + P                     G AF M    D ++     N +P 
Sbjct  464  PGLGHTDSTETYISPRGVPIEVMAPIRDESDMFLADGRAFVMSAPGDPISGDPTWNGVPL  523

Query  228  ----EFGAFGSAPQDVPGMTQLSVNTGLAP  253
                + G FG  P  +P + QLS +  + P
Sbjct  524  PSAGDLGQFGPNPLTLP-LEQLSADAAVTP  552


>gi|302528389|ref|ZP_07280731.1| hypothetical protein SSMG_04771 [Streptomyces sp. AA4]
 gi|302437284|gb|EFL09100.1| hypothetical protein SSMG_04771 [Streptomyces sp. AA4]
Length=565

 Score =  104 bits (259),  Expect = 1e-20, Method: Compositional matrix adjust.
 Identities = 80/224 (36%), Positives = 115/224 (52%), Gaps = 17/224 (7%)

Query  45   LILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAEL  104
            L+ LD   D  K  AA+  GDVD A+ V V   G+N+ V  ++   V +    R  A ++
Sbjct  307  LMSLDLTGDHPK--AAIANGDVDTAQHVAVFTPGMNSTVDGNMNGYVNDMQGVRRSAEDM  364

Query  105  RERAGWPNYDAVASIAWLGY-----DAPDGLKDVMHDWSARDAAGPLNRFDKGLAATTNV  159
              RAG  +  +VA++ WLGY     D P  L  ++   +       L RFD+G+ A+   
Sbjct  365  LRRAG--DMSSVATVTWLGYEPSSFDDPSSLVGLVTADNVDFGGDKLARFDQGINAS-RP  421

Query  160  SDQHITAFGHSYGSLVTSLALQQ-GAPVSDVVLYGSPGTEL-----THASQLGVEPGHAF  213
            +D H+TA GHS GS+VT ++L   G  V D V++GSPG          A  L V  GHA+
Sbjct  422  TDPHMTALGHSQGSIVTGISLTHAGTGVDDAVVFGSPGVANHFGIDNTAHDLKVPDGHAY  481

Query  214  YMIGVNDHVANTIPEFGAFGSAPQDVPGMTQLSVNTGLAP-GPL  256
             +    D +A   PE   +G+AP  + GM QLS +  + P GPL
Sbjct  482  NIKADGDDIAKWAPETWRYGAAPYAMEGMNQLSADAAMGPDGPL  525


>gi|296394913|ref|YP_003659797.1| hypothetical protein Srot_2529 [Segniliparus rotundus DSM 44985]
 gi|296182060|gb|ADG98966.1| protein of unknown function DUF1023 [Segniliparus rotundus DSM 
44985]
Length=364

 Score =  101 bits (251),  Expect = 1e-19, Method: Compositional matrix adjust.
 Identities = 90/264 (35%), Positives = 128/264 (49%), Gaps = 33/264 (12%)

Query  19   VWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGG  78
            +W T+  KLADL  +  TLA +P   L+ LD  S+PR  + A+ +GD D A  + VT  G
Sbjct  55   LWRTER-KLADLAVIARTLAENPDAKLLFLDVRSEPR-TMTAIALGDPDAARHIAVTTPG  112

Query  79   LN----------TRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPD  128
             N          + V  ++   + EA   +  A ++  R G     AVA+I WLGY +P+
Sbjct  113  ANAAVSSAAAPFSEVVWNLPKFIDEARALKENAEQVARRCG-AQGAAVATIIWLGYQSPN  171

Query  129  -----------GLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTS  177
                       G   V     AR  AG L+ F +GLA        H+ A GHSYGSL+T+
Sbjct  172  PDGPNHRARLSGRYGVYATRRARAGAGALSTFYQGLAVRDPAP--HLVAIGHSYGSLLTA  229

Query  178  LALQQGAP--VSDVVLYGSPGTELTH---ASQLGVEPGHAFYMIGVNDHVANTIPEFG--  230
            LAL+   P  VSDVV  GSPG        A+QL +  GH + M+  +D + +  P     
Sbjct  230  LALRLTPPGMVSDVVFCGSPGIPENSGEGAAQLHMADGHVYAMMSDDDEIRDWFPLLRRV  289

Query  231  AFGSAPQDVPGMTQLSVNTGLAPG  254
             +G  P  +P +  L   +G+ PG
Sbjct  290  IYGVEPTAMPWVVSLPTGSGIGPG  313


>gi|340627558|ref|YP_004746010.1| hypothetical protein MCAN_25831 [Mycobacterium canettii CIPT 
140010059]
 gi|340005748|emb|CCC44914.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=361

 Score = 99.8 bits (247),  Expect = 4e-19, Method: Compositional matrix adjust.
 Identities = 81/243 (34%), Positives = 125/243 (52%), Gaps = 20/243 (8%)

Query  5    ELTRLQNGWLSRDGVWHTDTDKLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAV-GV  63
            E +RL +G +         TD+LAD+  +++ L   P + LI +    DP  ++ AV  V
Sbjct  130  EYSRLPDGQVK--------TDRLADIAGIQEALRV-PDSHLIYVAKPDDPADMIPAVTAV  180

Query  64   GDVDNAERVGVTMGGLNTRVSSSVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLG  123
            GD   A+ V VT+ G++     ++  M +EAG  R +A  +  + G      VA+IAW+G
Sbjct  181  GDPFTADHVSVTVPGVSGTTRQTIATMTQEAGDLRREAQYVARKVG--ESTNVATIAWVG  238

Query  124  YDAPDGLK--DVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQ  181
            Y  P  L   D + D  A+  A  L  F + L A ++        FGHSYGSL++ +AL+
Sbjct  239  YQPPPVLASWDTVDDDLAQAGAPKLEAFLRDLQAGSHNPGHTTALFGHSYGSLLSGIALK  298

Query  182  QGAP--VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHV---ANTIPEFGAFGSAP  236
             GA   V + VLYGSPG + T  ++LG+   + F M   +D +   A   P  G +GS P
Sbjct  299  DGASSLVDNAVLYGSPGFDATSPAKLGMNDHNFFVMTTPDDPIRYPARLAPLHG-WGSDP  357

Query  237  QDV  239
             ++
Sbjct  358  NEI  360


>gi|340358546|ref|ZP_08681061.1| hypothetical protein HMPREF9062_0186 [Actinomyces sp. oral taxon 
448 str. F0400]
 gi|339886237|gb|EGQ75903.1| hypothetical protein HMPREF9062_0186 [Actinomyces sp. oral taxon 
448 str. F0400]
Length=446

 Score = 98.2 bits (243),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 80/235 (35%), Positives = 112/235 (48%), Gaps = 33/235 (14%)

Query  30   LRALRDTLA--AHPGT----SLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRV  83
            + +LRDT +   +P      SL++LD + D   + AAVG GD+D A+ V V   G+ T V
Sbjct  168  IDSLRDTFSYSENPDKERIHSLLVLDNSGD--HLRAAVGTGDIDAADHVLVYTPGMTTTV  225

Query  84   SSSVGDMVKEAGIQRAKAAELRERAGWPNYD---------AVASIAWLGYDAP-------  127
            +  +    KE G +  +A  +    G P++D           A + WLGYDAP       
Sbjct  226  AGGLVTGGKEFGAKVDEAERIMSETGMPDHDDKNTEQVEETAAGVTWLGYDAPGWDETLT  285

Query  128  --DGLKDVMHDWSARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQGAP  185
              DG   V+ D  A+ AA  L  F  G+ AT +  D H+ A GHSYGS VT  A Q+   
Sbjct  286  GSDGT--VLSDHEAQSAAPDLAGFYDGIQAT-HTGDPHLVAAGHSYGSTVTGYASQESDA  342

Query  186  VSDVVLYGSPGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVP  240
              D+V++GSPG     AS L   P   +     +D VA     +G +G  P   P
Sbjct  343  PDDIVVWGSPGASTVDASDLNTVPDRMYSASATDDFVAG----YGRYGGNPTTDP  393


>gi|254381102|ref|ZP_04996467.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340012|gb|EDX20978.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length=602

 Score = 96.3 bits (238),  Expect = 4e-18, Method: Compositional matrix adjust.
 Identities = 73/200 (37%), Positives = 100/200 (50%), Gaps = 12/200 (6%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSS  85
            K+  LR ++D L   P    + L    D     A V  G+ D ++ V   + GL+T+++ 
Sbjct  310  KVDALRMIQDKLG-EPSRPPMFLLGIGDEGNGRAIVSYGNPDTSKNVSAYVPGLSTKLN-  367

Query  86   SVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAPDGLKDVMHDWSARDAAGP  145
               D      ++RA+   +  R   P   + ASI WLGYDAP  + DVM    A+  A  
Sbjct  368  ---DEFVTGTMKRAQDTAIGARRVDP---SSASIVWLGYDAPQNV-DVMSKGDAQRGAPA  420

Query  146  LNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQ--GAP-VSDVVLYGSPGTELTHA  202
             N F  G++AT    D H+TA GHSYGSL    A +Q  G P V DV+L GSPG +   A
Sbjct  421  YNEFMAGISATNENKDPHVTAIGHSYGSLTVGTAAKQSGGIPGVDDVILLGSPGVDAQKA  480

Query  203  SQLGVEPGHAFYMIGVNDHV  222
            ++LGV   H F     ND V
Sbjct  481  TELGVGKNHVFVGAADNDPV  500


>gi|229821763|ref|YP_002883289.1| hypothetical protein Bcav_3284 [Beutenbergia cavernae DSM 12333]
 gi|229567676|gb|ACQ81527.1| protein of unknown function DUF1023 [Beutenbergia cavernae DSM 
12333]
Length=569

 Score = 95.9 bits (237),  Expect = 6e-18, Method: Compositional matrix adjust.
 Identities = 86/234 (37%), Positives = 117/234 (50%), Gaps = 20/234 (8%)

Query  26   KLADLRALRDTLAAHPGTSLILLDTASDPRKVLAAVGVGDVDNAERVGVTMGGLNTRVSS  85
            KLA L A+  TLA   G  L++LD   D  ++LAAV VGDVD A+ V V   GL+T V +
Sbjct  281  KLAGLDAVEATLA-RGGRQLLVLDP-HDGDQLLAAVAVGDVDAADHVAVFTPGLDTTVGA  338

Query  86   SVGDMVKEAGIQRAKAAELRERAGWPNYDAVASIAWLGYDAP--DG-LKDVMHDWS----  138
            S+     +      +AA+  ER G      VA++AWL Y AP  DG + DV+ D      
Sbjct  339  SLRGYDADMAALAQRAADEAERYGTGG--TVATVAWLAYRAPQLDGSVLDVLGDERTSVA  396

Query  139  ----ARDAAGPLNRFDKGLAATTNVSDQHITAFGHSYGSLVTSLALQQGAPVSDVVLYGS  194
                A+     L  F +G+ A+    D H+TA GHSYGS  T  AL +   V D  ++GS
Sbjct  397  SAQLAQRGGADLAEFLRGINASRE-HDPHLTALGHSYGSTTTGYALAEPTGVDDAAVFGS  455

Query  195  PGTELTHASQLGVEPGHAFYMIGVNDHVANTIPEFGAFGSAPQDVPGMTQLSVN  248
            PG   + A  L V  G+ + +    D VA+     G FG  P  + G+  LS  
Sbjct  456  PGLGTSDAGYLAVPEGNLYRVEAKGDPVAD----LGRFGIDPSHLEGVRGLSAE  505



Lambda     K      H
   0.315    0.133    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 404210254038




  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40