BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0967
Length=119
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608107|ref|NP_215482.1| hypothetical protein Rv0967 [Mycoba... 245 1e-63
gi|340625979|ref|YP_004744431.1| hypothetical protein MCAN_09711... 244 4e-63
gi|308231683|ref|ZP_07413436.2| hypothetical protein TMAG_00903 ... 237 5e-61
gi|296164641|ref|ZP_06847207.1| copper-sensing transcriptional r... 204 5e-51
gi|331695159|ref|YP_004331398.1| hypothetical protein Psed_1302 ... 198 2e-49
gi|183984842|ref|YP_001853133.1| hypothetical protein MMAR_4874 ... 197 5e-49
gi|118616276|ref|YP_904608.1| hypothetical protein MUL_0425 [Myc... 196 1e-48
gi|158512709|sp|A0PLB8.2|CSOR_MYCUA RecName: Full=Copper-sensing... 196 1e-48
gi|183982551|ref|YP_001850842.1| hypothetical protein MMAR_2538 ... 156 1e-36
gi|339629864|ref|YP_004721507.1| hypothetical protein TPY_3612 [... 95.1 3e-18
gi|226357636|ref|YP_002787376.1| hypothetical protein Deide_1p01... 80.5 9e-14
gi|94972023|ref|YP_594063.1| hypothetical protein Dgeo_2555 [Dei... 80.1 1e-13
gi|335431193|ref|ZP_08558076.1| hypothetical protein HLPCO_19431... 79.3 2e-13
gi|291294695|ref|YP_003506093.1| hypothetical protein Mrub_0295 ... 79.0 2e-13
gi|225180846|ref|ZP_03734294.1| protein of unknown function DUF1... 79.0 2e-13
gi|254519075|ref|ZP_05131131.1| conserved hypothetical protein [... 77.8 4e-13
gi|293401955|ref|ZP_06646095.1| copper-sensing transcriptional r... 77.8 5e-13
gi|297584131|ref|YP_003699911.1| hypothetical protein Bsel_1839 ... 77.8 5e-13
gi|319653760|ref|ZP_08007857.1| hypothetical protein HMPREF1013_... 77.0 9e-13
gi|52081858|ref|YP_080649.1| hypothetical protein BL01897 [Bacil... 76.6 1e-12
gi|148379283|ref|YP_001253824.1| hypothetical protein CBO1303 [C... 76.6 1e-12
gi|228998491|ref|ZP_04158079.1| hypothetical protein bmyco0003_3... 76.3 1e-12
gi|206977882|ref|ZP_03238770.1| conserved hypothetical protein [... 75.9 2e-12
gi|168184240|ref|ZP_02618904.1| conserved hypothetical protein [... 75.9 2e-12
gi|320160671|ref|YP_004173895.1| hypothetical protein ANT_12610 ... 75.5 2e-12
gi|345021636|ref|ZP_08785249.1| hypothetical protein OTW25_09929... 75.5 3e-12
gi|152976120|ref|YP_001375637.1| hypothetical protein Bcer98_240... 75.1 3e-12
gi|23098596|ref|NP_692062.1| hypothetical protein OB1141 [Oceano... 75.1 3e-12
gi|164687195|ref|ZP_02211223.1| hypothetical protein CLOBAR_0083... 75.1 3e-12
gi|301055222|ref|YP_003793433.1| hypothetical protein BACI_c3682... 75.1 3e-12
gi|42782811|ref|NP_980058.1| hypothetical protein BCE_3761 [Baci... 74.7 4e-12
gi|206968944|ref|ZP_03229899.1| conserved hypothetical protein [... 74.7 4e-12
gi|288556609|ref|YP_003428544.1| hypothetical protein BpOF4_1805... 74.7 4e-12
gi|229162664|ref|ZP_04290621.1| hypothetical protein bcere0009_3... 74.7 4e-12
gi|30263734|ref|NP_846111.1| hypothetical protein BA_3861 [Bacil... 74.7 4e-12
gi|340356717|ref|ZP_08679359.1| copper-sensing transcriptional r... 74.7 5e-12
gi|229018916|ref|ZP_04175759.1| hypothetical protein bcere0030_3... 74.7 5e-12
gi|219850258|ref|YP_002464691.1| hypothetical protein Cagg_3411 ... 74.7 5e-12
gi|254739704|ref|ZP_05197398.1| hypothetical protein BantKB_0156... 74.3 6e-12
gi|340358109|ref|ZP_08680705.1| copper-sensing transcriptional r... 73.9 8e-12
gi|169824098|ref|YP_001691709.1| hypothetical protein FMG_0401 [... 73.9 8e-12
gi|228994796|ref|ZP_04154594.1| hypothetical protein bpmyx0001_5... 73.6 8e-12
gi|229086298|ref|ZP_04218476.1| hypothetical protein bcere0022_2... 73.6 9e-12
gi|293375800|ref|ZP_06622070.1| conserved hypothetical protein [... 73.6 1e-11
gi|298246205|ref|ZP_06970011.1| protein of unknown function DUF1... 73.6 1e-11
gi|222097187|ref|YP_002531244.1| hypothetical protein BCQ_3527 [... 73.2 1e-11
gi|75759839|ref|ZP_00739914.1| Hypothetical cytosolic protein [B... 73.2 1e-11
gi|228922446|ref|ZP_04085748.1| hypothetical protein bthur0011_3... 73.2 1e-11
gi|153953431|ref|YP_001394196.1| hypothetical protein CKL_0795 [... 73.2 1e-11
gi|341591197|gb|EGS34405.1| hypothetical protein HMPREF9489_1239... 72.8 1e-11
>gi|15608107|ref|NP_215482.1| hypothetical protein Rv0967 [Mycobacterium tuberculosis H37Rv]
gi|15840393|ref|NP_335430.1| hypothetical protein MT0995 [Mycobacterium tuberculosis CDC1551]
gi|31792156|ref|NP_854649.1| hypothetical protein Mb0992 [Mycobacterium bovis AF2122/97]
62 more sequence titles
Length=119
Score = 245 bits (626), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/119 (100%), Positives = 119/119 (100%), Gaps = 0/119 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN
Sbjct 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 119
HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
Sbjct 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 119
>gi|340625979|ref|YP_004744431.1| hypothetical protein MCAN_09711 [Mycobacterium canettii CIPT
140010059]
gi|340004169|emb|CCC43308.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059]
Length=119
Score = 244 bits (622), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/119 (99%), Positives = 119/119 (100%), Gaps = 0/119 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
M+KELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN
Sbjct 1 MNKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 119
HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
Sbjct 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 119
>gi|308231683|ref|ZP_07413436.2| hypothetical protein TMAG_00903 [Mycobacterium tuberculosis SUMu001]
gi|308370113|ref|ZP_07420323.2| hypothetical protein TMBG_01648 [Mycobacterium tuberculosis SUMu002]
gi|308370549|ref|ZP_07421972.2| hypothetical protein TMCG_04042 [Mycobacterium tuberculosis SUMu003]
19 more sequence titles
Length=115
Score = 237 bits (604), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 114/115 (99%), Positives = 115/115 (100%), Gaps = 0/115 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+TAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET
Sbjct 1 MTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 60
Query 65 CFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 119
CFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM
Sbjct 61 CFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPMPDASNM 115
>gi|296164641|ref|ZP_06847207.1| copper-sensing transcriptional repressor CsoR [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899949|gb|EFG79389.1| copper-sensing transcriptional repressor CsoR [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length=120
Score = 204 bits (518), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/113 (88%), Positives = 107/113 (95%), Gaps = 1/113 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
M ++LT KKRAALNRLKTVRGHLDGI+RM+ESDAYCVDVMKQISAVQSSLERANRVMLHN
Sbjct 1 MGEDLTDKKRAALNRLKTVRGHLDGIIRMVESDAYCVDVMKQISAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATE-EP 112
HLETCFS AV+DG GQAAIEELIDAVKFTPALTGPHA+L GAAVGE+AT+ EP
Sbjct 61 HLETCFSAAVIDGRGQAAIEELIDAVKFTPALTGPHAQLTGAAVGEAATDGEP 113
>gi|331695159|ref|YP_004331398.1| hypothetical protein Psed_1302 [Pseudonocardia dioxanivorans
CB1190]
gi|326949848|gb|AEA23545.1| protein of unknown function DUF156 [Pseudonocardia dioxanivorans
CB1190]
Length=116
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/106 (91%), Positives = 100/106 (95%), Gaps = 0/106 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
MS+ELTAKKRAALNRLKTVRGHLDGI+RMLESDAYCVDVMKQISAVQSSLERANRVMLHN
Sbjct 1 MSQELTAKKRAALNRLKTVRGHLDGIIRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGE 106
HLETCFS AVL G GQAAI+ELIDAVKF+PALTGP RL GAAVGE
Sbjct 61 HLETCFSDAVLGGRGQAAIDELIDAVKFSPALTGPDGRLTGAAVGE 106
>gi|183984842|ref|YP_001853133.1| hypothetical protein MMAR_4874 [Mycobacterium marinum M]
gi|183178168|gb|ACC43278.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=117
Score = 197 bits (500), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 95/112 (85%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
MS ELT KKRAALNRLKT RGHLDGI+RMLESDAYCVDVMKQ+SAVQSSLERANRVMLHN
Sbjct 1 MSHELTDKKRAALNRLKTARGHLDGIIRMLESDAYCVDVMKQLSAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEP 112
HLETCFS AVLDG GQAAI+ELIDAVKFTPALTGP A+LGGA V E ++P
Sbjct 61 HLETCFSAAVLDGRGQAAIDELIDAVKFTPALTGPQAQLGGAVVCEPPGDQP 112
>gi|118616276|ref|YP_904608.1| hypothetical protein MUL_0425 [Mycobacterium ulcerans Agy99]
gi|118568386|gb|ABL03137.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99]
Length=128
Score = 196 bits (498), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/112 (84%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
MS ELT KKRAALNRLKT RGHLDGI+RMLESDAYCVDVMKQ+SAVQSSLERANRVMLHN
Sbjct 12 MSHELTDKKRAALNRLKTARGHLDGIIRMLESDAYCVDVMKQLSAVQSSLERANRVMLHN 71
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEP 112
HLETCFS AVLDG GQAAI+ELIDAVKFTPALTGP A+LGGA V + ++P
Sbjct 72 HLETCFSAAVLDGRGQAAIDELIDAVKFTPALTGPQAQLGGAVVCKPPGDQP 123
>gi|158512709|sp|A0PLB8.2|CSOR_MYCUA RecName: Full=Copper-sensing transcriptional repressor CsoR;
AltName: Full=Copper-sensitive operon repressor
Length=117
Score = 196 bits (497), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/112 (84%), Positives = 101/112 (91%), Gaps = 0/112 (0%)
Query 1 MSKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHN 60
MS ELT KKRAALNRLKT RGHLDGI+RMLESDAYCVDVMKQ+SAVQSSLERANRVMLHN
Sbjct 1 MSHELTDKKRAALNRLKTARGHLDGIIRMLESDAYCVDVMKQLSAVQSSLERANRVMLHN 60
Query 61 HLETCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEP 112
HLETCFS AVLDG GQAAI+ELIDAVKFTPALTGP A+LGGA V + ++P
Sbjct 61 HLETCFSAAVLDGRGQAAIDELIDAVKFTPALTGPQAQLGGAVVCKPPGDQP 112
>gi|183982551|ref|YP_001850842.1| hypothetical protein MMAR_2538 [Mycobacterium marinum M]
gi|183175877|gb|ACC40987.1| conserved hypothetical protein [Mycobacterium marinum M]
Length=202
Score = 156 bits (394), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/110 (71%), Positives = 87/110 (80%), Gaps = 0/110 (0%)
Query 4 ELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLE 63
EL KRA LNR KTVRG+L GI+R+ ESDAY V+V KQISAVQSSLERANRVMLHNHLE
Sbjct 87 ELIVNKRAVLNRPKTVRGNLFGIIRVTESDAYFVEVTKQISAVQSSLERANRVMLHNHLE 146
Query 64 TCFSTAVLDGHGQAAIEELIDAVKFTPALTGPHARLGGAAVGESATEEPM 113
CF AV G G+AAI+ELIDAVK TPALTG LGGAAVGE ++P+
Sbjct 147 RCFLVAVPGGRGRAAIDELIDAVKLTPALTGQQVELGGAAVGEPVDDDPL 196
>gi|339629864|ref|YP_004721507.1| hypothetical protein TPY_3612 [Sulfobacillus acidophilus TPY]
gi|339287653|gb|AEJ41764.1| hypothetical protein TPY_3612 [Sulfobacillus acidophilus TPY]
Length=119
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 45/87 (52%), Positives = 63/87 (73%), Gaps = 1/87 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
K+ AAL RLK GHL+ + +M++ D YCV++MKQ++AVQ+SLE+ R++L NHL TC S
Sbjct 6 KEDAAL-RLKVAVGHLESVRKMVDQDVYCVNIMKQLAAVQASLEQVQRILLRNHLLTCVS 64
Query 68 TAVLDGHGQAAIEELIDAVKFTPALTG 94
AV G G I+EL+DA+K+ P TG
Sbjct 65 DAVSQGFGPQIIDELVDAMKYMPFSTG 91
>gi|226357636|ref|YP_002787376.1| hypothetical protein Deide_1p01710 [Deinococcus deserti VCD115]
gi|226319627|gb|ACO47622.1| Conserved hypothetical protein [Deinococcus deserti VCD115]
Length=107
Score = 80.5 bits (197), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/84 (53%), Positives = 57/84 (68%), Gaps = 2/84 (2%)
Query 7 AKKRAALNRLKTVRGHLDGIVRMLESD-AYCVDVMKQISAVQSSLERANRVMLHNHLETC 65
++KRAA RLK RGHLD IV MLE D AYCVDV++Q+ AVQ +L A V+L HLE
Sbjct 25 SRKRAA-RRLKIARGHLDSIVTMLEKDDAYCVDVLRQLKAVQGALSGAGEVVLRGHLEAH 83
Query 66 FSTAVLDGHGQAAIEELIDAVKFT 89
+TA G +EEL++A+K+T
Sbjct 84 VATASTRGDSVEIVEELMEALKYT 107
>gi|94972023|ref|YP_594063.1| hypothetical protein Dgeo_2555 [Deinococcus geothermalis DSM
11300]
gi|94554074|gb|ABF43989.1| protein of unknown function DUF156 [Deinococcus geothermalis
DSM 11300]
Length=112
Score = 80.1 bits (196), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/84 (53%), Positives = 57/84 (68%), Gaps = 2/84 (2%)
Query 7 AKKRAALNRLKTVRGHLDGIVRMLES-DAYCVDVMKQISAVQSSLERANRVMLHNHLETC 65
A+KRAA RLK RGHLD IV ML+ DAYCVDV++Q+ AVQ +L A V+L HLE
Sbjct 30 ARKRAA-RRLKIARGHLDSIVAMLDKEDAYCVDVLRQLKAVQGALSGAGEVVLRGHLEAH 88
Query 66 FSTAVLDGHGQAAIEELIDAVKFT 89
+TA G +EEL++A+K+T
Sbjct 89 VATASTRGDSVEIVEELMEALKYT 112
>gi|335431193|ref|ZP_08558076.1| hypothetical protein HLPCO_19431 [Haloplasma contractile SSD-17B]
gi|334886898|gb|EGM25243.1| hypothetical protein HLPCO_19431 [Haloplasma contractile SSD-17B]
Length=87
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/82 (43%), Positives = 55/82 (68%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+T + + +N LKT +G +DGI++M+E+D YCVD+ KQI AVQS L++AN +L H+ +
Sbjct 1 MTHEDKQLINLLKTSKGQIDGILKMIENDRYCVDISKQILAVQSMLKKANLRILEGHINS 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C A +G G + E+ID +
Sbjct 61 CVKEAFSEGKGDEKVSEVIDIL 82
>gi|291294695|ref|YP_003506093.1| hypothetical protein Mrub_0295 [Meiothermus ruber DSM 1279]
gi|290469654|gb|ADD27073.1| protein of unknown function DUF156 [Meiothermus ruber DSM 1279]
Length=94
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/80 (44%), Positives = 58/80 (73%), Gaps = 0/80 (0%)
Query 9 KRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFST 68
++ A NRL + +GHL+GI++MLE + YCVDV+KQI AVQ +L++ ++L +HLE ++
Sbjct 14 RQEARNRLLSAKGHLEGILKMLEGEPYCVDVLKQIKAVQGALDKVGEMVLRSHLEHHVAS 73
Query 69 AVLDGHGQAAIEELIDAVKF 88
A + G Q +EEL++ +K+
Sbjct 74 AAVRGDTQRMVEELMEVLKY 93
>gi|225180846|ref|ZP_03734294.1| protein of unknown function DUF156 [Dethiobacter alkaliphilus
AHT 1]
gi|225168327|gb|EEG77130.1| protein of unknown function DUF156 [Dethiobacter alkaliphilus
AHT 1]
Length=88
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/81 (45%), Positives = 52/81 (65%), Gaps = 0/81 (0%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
KK + R+KT GHL + RM++ D YC DV+ Q+ AV SSLE+ + ++L NHLETC
Sbjct 5 KKMDTIRRIKTASGHLKAVERMVDEDKYCADVLLQLQAVISSLEKISNIILENHLETCMR 64
Query 68 TAVLDGHGQAAIEELIDAVKF 88
+A+L G + I EL +K+
Sbjct 65 SAILRGEDEEIIRELKTFMKY 85
>gi|254519075|ref|ZP_05131131.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
gi|226912824|gb|EEH98025.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
Length=88
Score = 77.8 bits (190), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/79 (41%), Positives = 51/79 (65%), Gaps = 0/79 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ +++ +L LKT +G +DGI++M+E D YC+D+ QI A QS L++AN ++L NHL
Sbjct 1 MNEERKKSLQSLKTAKGQIDGIIKMIEEDRYCIDISNQIFAAQSLLKKANLIILENHLSH 60
Query 65 CFSTAVLDGHGQAAIEELI 83
C A + G G I E++
Sbjct 61 CVKDACISGDGDEKINEIM 79
>gi|293401955|ref|ZP_06646095.1| copper-sensing transcriptional repressor CsoR (Copper-sensitive
operon repressor) [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304613|gb|EFE45862.1| copper-sensing transcriptional repressor CsoR (Copper-sensitive
operon repressor) [Erysipelotrichaceae bacterium 5_2_54FAA]
Length=87
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/82 (43%), Positives = 53/82 (65%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+T +++ AL LKT RG +DGI+RM+E + YC+D+ QI A QS L++AN +L HL T
Sbjct 1 MTPERKKALQNLKTARGQIDGIIRMIEDERYCIDISNQIMASQSLLKKANLHILSGHLHT 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C TA+ G ++E+ D +
Sbjct 61 CVKTAIATGDSDEKLQEIEDVL 82
>gi|297584131|ref|YP_003699911.1| hypothetical protein Bsel_1839 [Bacillus selenitireducens MLS10]
gi|297142588|gb|ADH99345.1| protein of unknown function DUF156 [Bacillus selenitireducens
MLS10]
Length=91
Score = 77.8 bits (190), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/76 (47%), Positives = 55/76 (73%), Gaps = 0/76 (0%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K+A + RL+ V G + GI +M+E D YCVD++ QISA+ + L+RA +L +H + C S
Sbjct 7 EKKALIQRLRRVEGQVRGIQKMIEEDRYCVDILVQISAINAGLKRAGFHILEDHTKGCVS 66
Query 68 TAVLDGHGQAAIEELI 83
+AV +G G++AIEEL+
Sbjct 67 SAVEEGDGESAIEELM 82
>gi|319653760|ref|ZP_08007857.1| hypothetical protein HMPREF1013_04476 [Bacillus sp. 2_A_57_CT2]
gi|317394603|gb|EFV75344.1| hypothetical protein HMPREF1013_04476 [Bacillus sp. 2_A_57_CT2]
Length=101
Score = 77.0 bits (188), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/82 (43%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 6 TAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETC 65
T +K + RLK + G + GI M+E+D YCVD++ QISA+ S++ +L NH C
Sbjct 14 TKEKDKLVTRLKRIEGQVRGIQNMIENDRYCVDILTQISAINSAMNNVGLHLLENHTRHC 73
Query 66 FSTAVLDGHGQAAIEELIDAVK 87
S A+ DG+G+ AI+EL+D K
Sbjct 74 VSDAIKDGNGEEAIQELMDVFK 95
>gi|52081858|ref|YP_080649.1| hypothetical protein BL01897 [Bacillus licheniformis ATCC 14580]
gi|52787245|ref|YP_093074.1| YvgZ [Bacillus licheniformis ATCC 14580]
gi|319647776|ref|ZP_08001994.1| copper-sensing transcriptional repressor csoR [Bacillus sp. BT1B_CT2]
gi|52005069|gb|AAU25011.1| conserved hypothetical protein YvgZ [Bacillus licheniformis ATCC
14580]
gi|52349747|gb|AAU42381.1| YvgZ [Bacillus licheniformis ATCC 14580]
gi|317390117|gb|EFV70926.1| copper-sensing transcriptional repressor csoR [Bacillus sp. BT1B_CT2]
Length=100
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/79 (44%), Positives = 52/79 (66%), Gaps = 0/79 (0%)
Query 9 KRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFST 68
K NRLK + G + GI +M+E+D YCVD++ QISAVQ+++++ +L +H C +
Sbjct 17 KEQITNRLKRIEGQVRGIQKMIENDRYCVDILVQISAVQAAMQKVAFSLLEDHTHHCVAN 76
Query 69 AVLDGHGQAAIEELIDAVK 87
A+ G G+ AIEEL+D K
Sbjct 77 AIKSGEGEEAIEELLDVFK 95
>gi|148379283|ref|YP_001253824.1| hypothetical protein CBO1303 [Clostridium botulinum A str. ATCC
3502]
gi|153931522|ref|YP_001383658.1| hypothetical protein CLB_1331 [Clostridium botulinum A str. ATCC
19397]
gi|153936265|ref|YP_001387207.1| hypothetical protein CLC_1341 [Clostridium botulinum A str. Hall]
17 more sequence titles
Length=88
Score = 76.6 bits (187), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/82 (40%), Positives = 55/82 (68%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ +K+AAL LKT +G ++GI++M+E YC+D+ Q++A QS L++AN ++L HL
Sbjct 1 MNEEKKAALQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNH 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C A L +G+ ++E+ID +
Sbjct 61 CVKQAFLHDNGEEKVDEIIDTL 82
>gi|228998491|ref|ZP_04158079.1| hypothetical protein bmyco0003_30520 [Bacillus mycoides Rock3-17]
gi|229005966|ref|ZP_04163657.1| hypothetical protein bmyco0002_28890 [Bacillus mycoides Rock1-4]
gi|228755283|gb|EEM04637.1| hypothetical protein bmyco0002_28890 [Bacillus mycoides Rock1-4]
gi|228761216|gb|EEM10174.1| hypothetical protein bmyco0003_30520 [Bacillus mycoides Rock3-17]
Length=101
Score = 76.3 bits (186), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 17 EKEQIMNRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGILKNHTNHCVS 76
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 77 NAIKDGNGDEAIEELMKVFERFSKA 101
>gi|206977882|ref|ZP_03238770.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217961155|ref|YP_002339723.1| hypothetical protein BCAH187_A3781 [Bacillus cereus AH187]
gi|229140375|ref|ZP_04268930.1| hypothetical protein bcere0013_34740 [Bacillus cereus BDRD-ST26]
gi|206743882|gb|EDZ55301.1| conserved hypothetical protein [Bacillus cereus H3081.97]
gi|217065769|gb|ACJ80019.1| conserved hypothetical protein [Bacillus cereus AH187]
gi|228642936|gb|EEK99212.1| hypothetical protein bcere0013_34740 [Bacillus cereus BDRD-ST26]
Length=100
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 56/85 (66%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
+A+ DG+G AIEEL+ +F+ A
Sbjct 76 SAIKDGNGDEAIEELMTVFERFSKA 100
>gi|168184240|ref|ZP_02618904.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|237794592|ref|YP_002862144.1| hypothetical protein CLJ_B1350 [Clostridium botulinum Ba4 str.
657]
gi|182672724|gb|EDT84685.1| conserved hypothetical protein [Clostridium botulinum Bf]
gi|229260482|gb|ACQ51515.1| conserved hypothetical protein [Clostridium botulinum Ba4 str.
657]
Length=88
Score = 75.9 bits (185), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/82 (38%), Positives = 55/82 (68%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ +K+AA+ LKT +G ++GI++M+E YC+D+ Q++A QS L++AN ++L HL
Sbjct 1 MNEEKKAAIQALKTSKGQIEGIIKMIEEGRYCIDISNQMTAAQSLLKKANMLILKQHLNH 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C A L +G+ ++E+ID +
Sbjct 61 CVKQAFLHDNGEEKVDEIIDTL 82
>gi|320160671|ref|YP_004173895.1| hypothetical protein ANT_12610 [Anaerolinea thermophila UNI-1]
gi|319994524|dbj|BAJ63295.1| hypothetical protein ANT_12610 [Anaerolinea thermophila UNI-1]
Length=90
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/59 (56%), Positives = 45/59 (77%), Gaps = 0/59 (0%)
Query 12 ALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFSTAV 70
A++RLK V GH+ GI +MLE DAYC+DV++QI AVQSSL + + ++L HL +C TAV
Sbjct 7 AIHRLKIVEGHIRGIQKMLEEDAYCIDVIRQIQAVQSSLNKVSTLLLEQHLNSCVITAV 65
>gi|345021636|ref|ZP_08785249.1| hypothetical protein OTW25_09929 [Ornithinibacillus sp. TW25]
Length=100
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/80 (42%), Positives = 52/80 (65%), Gaps = 0/80 (0%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K+ +NRLK + G + GI +M+E D YCVD++ QISA+QS+L+ + H+ C S
Sbjct 17 EKQKVINRLKRIEGQVRGIQKMVEEDRYCVDILVQISAIQSALKNVGFAVTERHINHCVS 76
Query 68 TAVLDGHGQAAIEELIDAVK 87
A+ G G+ IEEL++ +K
Sbjct 77 DAIRQGEGKETIEELMEVLK 96
>gi|152976120|ref|YP_001375637.1| hypothetical protein Bcer98_2404 [Bacillus cereus subsp. cytotoxis
NVH 391-98]
gi|152024872|gb|ABS22642.1| protein of unknown function DUF156 [Bacillus cytotoxicus NVH
391-98]
Length=101
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 17 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMSILKNHTHHCVS 76
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 77 HAIQDGNGDEAIEELMRVFERFSKA 101
>gi|23098596|ref|NP_692062.1| hypothetical protein OB1141 [Oceanobacillus iheyensis HTE831]
gi|22776822|dbj|BAC13097.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length=99
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (44%), Positives = 55/86 (64%), Gaps = 1/86 (1%)
Query 6 TAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETC 65
A+K+A NRLK + G + GI M+E D YCVD++ QISA+Q++L++ + H++ C
Sbjct 14 NAEKQAVTNRLKRIEGQVRGIQMMVEEDRYCVDILVQISAIQAALKKVGFEITERHMKHC 73
Query 66 FSTAVLDGHGQAAIEELIDAVK-FTP 90
S AV G G AIEE++ +K FT
Sbjct 74 VSDAVKSGEGNEAIEEVMSVLKQFTK 99
>gi|164687195|ref|ZP_02211223.1| hypothetical protein CLOBAR_00836 [Clostridium bartlettii DSM
16795]
gi|164603619|gb|EDQ97084.1| hypothetical protein CLOBAR_00836 [Clostridium bartlettii DSM
16795]
Length=97
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/97 (43%), Positives = 64/97 (66%), Gaps = 7/97 (7%)
Query 1 MSKELTAK--KRAALNR-LKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVM 57
MS++ AK +AALNR LK + G + GI +M+E D YCVD++ QISA++S+++ ++
Sbjct 1 MSEKKLAKGNDKAALNRRLKRIEGQVKGIQKMIEDDRYCVDILVQISAIRSAIDNVGTII 60
Query 58 LHNHLETCFSTAVLDG---HGQAAIEELIDAV-KFTP 90
L NH++ C S + G +AAI+EL+D + KFT
Sbjct 61 LENHIKGCVSNDLKYGDEEQSEAAIKELMDTIKKFTK 97
>gi|301055222|ref|YP_003793433.1| hypothetical protein BACI_c36820 [Bacillus cereus biovar anthracis
str. CI]
gi|300377391|gb|ADK06295.1| conserved hypothetical protein [Bacillus cereus biovar anthracis
str. CI]
Length=98
Score = 75.1 bits (183), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/86 (41%), Positives = 56/86 (66%), Gaps = 1/86 (1%)
Query 7 AKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCF 66
++K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C
Sbjct 13 SEKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCV 72
Query 67 STAVLDGHGQAAIEELIDAV-KFTPA 91
S A+ DG+G AIEEL+ +F+ A
Sbjct 73 SGAIKDGNGDEAIEELMTVFERFSKA 98
>gi|42782811|ref|NP_980058.1| hypothetical protein BCE_3761 [Bacillus cereus ATCC 10987]
gi|229071228|ref|ZP_04204452.1| hypothetical protein bcere0025_34020 [Bacillus cereus F65185]
gi|229080985|ref|ZP_04213498.1| hypothetical protein bcere0023_36260 [Bacillus cereus Rock4-2]
8 more sequence titles
Length=100
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|206968944|ref|ZP_03229899.1| conserved hypothetical protein [Bacillus cereus AH1134]
gi|206735985|gb|EDZ53143.1| conserved hypothetical protein [Bacillus cereus AH1134]
Length=100
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|288556609|ref|YP_003428544.1| hypothetical protein BpOF4_18055 [Bacillus pseudofirmus OF4]
gi|288547769|gb|ADC51652.1| hypothetical protein BpOF4_18055 [Bacillus pseudofirmus OF4]
Length=92
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/86 (39%), Positives = 57/86 (67%), Gaps = 0/86 (0%)
Query 2 SKELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNH 61
K + K+ LNRLK + G + GI M+E+D YCVDV+ QISA+Q+++ + + ++ +H
Sbjct 4 KKTVQPNKQQMLNRLKRIEGQVRGIHNMIENDRYCVDVLTQISAIQAAINKVSLGLVEDH 63
Query 62 LETCFSTAVLDGHGQAAIEELIDAVK 87
C + A+ + +G+ AI+EL+D +K
Sbjct 64 TRHCVANAIKNDNGEKAIDELMDVMK 89
>gi|229162664|ref|ZP_04290621.1| hypothetical protein bcere0009_34340 [Bacillus cereus R309803]
gi|228620546|gb|EEK77415.1| hypothetical protein bcere0009_34340 [Bacillus cereus R309803]
Length=100
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|30263734|ref|NP_846111.1| hypothetical protein BA_3861 [Bacillus anthracis str. Ames]
gi|47529150|ref|YP_020499.1| hypothetical protein GBAA_3861 [Bacillus anthracis str. 'Ames
Ancestor']
gi|47568224|ref|ZP_00238927.1| uncharacterized BCR [Bacillus cereus G9241]
73 more sequence titles
Length=100
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|340356717|ref|ZP_08679359.1| copper-sensing transcriptional repressor CsoR [Sporosarcina newyorkensis
2681]
gi|339620644|gb|EGQ25213.1| copper-sensing transcriptional repressor CsoR [Sporosarcina newyorkensis
2681]
Length=95
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (65%), Gaps = 0/85 (0%)
Query 3 KELTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHL 62
K + K+ LNRLK + G + GI +M+E+D YCVD++ QISA+QS++ + + +L +H
Sbjct 7 KTVQPNKQQLLNRLKRIEGQVRGIHQMIENDRYCVDILHQISAIQSAMNKVSLALLEDHT 66
Query 63 ETCFSTAVLDGHGQAAIEELIDAVK 87
C A+ G+AAI+EL+ +K
Sbjct 67 HHCVVNAIKGQDGEAAIQELMSVMK 91
>gi|229018916|ref|ZP_04175759.1| hypothetical protein bcere0030_34300 [Bacillus cereus AH1273]
gi|229025161|ref|ZP_04181585.1| hypothetical protein bcere0029_34640 [Bacillus cereus AH1272]
gi|228736094|gb|EEL86665.1| hypothetical protein bcere0029_34640 [Bacillus cereus AH1272]
gi|228742359|gb|EEL92516.1| hypothetical protein bcere0030_34300 [Bacillus cereus AH1273]
Length=100
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|219850258|ref|YP_002464691.1| hypothetical protein Cagg_3411 [Chloroflexus aggregans DSM 9485]
gi|219544517|gb|ACL26255.1| protein of unknown function DUF156 [Chloroflexus aggregans DSM
9485]
Length=91
Score = 74.7 bits (182), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 29/63 (47%), Positives = 47/63 (75%), Gaps = 0/63 (0%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K+ LNRLKT+ GH+ G+ RM+E DAYC+D++ Q A+Q +L + + ++L NHL +C +
Sbjct 5 RKQQILNRLKTIEGHIRGVQRMVEEDAYCIDLLNQTRAIQQALAKLDAIILANHLHSCVT 64
Query 68 TAV 70
TA+
Sbjct 65 TAI 67
>gi|254739704|ref|ZP_05197398.1| hypothetical protein BantKB_01567 [Bacillus anthracis str. Kruger
B]
Length=100
Score = 74.3 bits (181), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/85 (42%), Positives = 54/85 (64%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ + +++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAEMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AIEEL+ +F+ A
Sbjct 76 GAIKDGNGDEAIEELMTVFERFSKA 100
>gi|340358109|ref|ZP_08680705.1| copper-sensing transcriptional repressor CsoR [Sporosarcina newyorkensis
2681]
gi|339615317|gb|EGQ19997.1| copper-sensing transcriptional repressor CsoR [Sporosarcina newyorkensis
2681]
Length=95
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/79 (42%), Positives = 54/79 (69%), Gaps = 0/79 (0%)
Query 9 KRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFST 68
K+ LNRLK V G + G+ +M+E+D YCVD++ QISA+QS++ + + +L +H C +
Sbjct 13 KQQLLNRLKRVEGQVRGVHQMVENDRYCVDILHQISAIQSAMNKVSLALLEDHTHHCVAN 72
Query 69 AVLDGHGQAAIEELIDAVK 87
A+ G+AAI+EL+ +K
Sbjct 73 AIKGQDGEAAIKELMSVMK 91
>gi|169824098|ref|YP_001691709.1| hypothetical protein FMG_0401 [Finegoldia magna ATCC 29328]
gi|167830903|dbj|BAG07819.1| conserved hypothetical protein [Finegoldia magna ATCC 29328]
Length=87
Score = 73.9 bits (180), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/82 (43%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+T K+ AL ++KTVRG LD IV M+E D YCVD+ QI + L++AN +L+ HL T
Sbjct 1 MTEHKQKALKKIKTVRGQLDAIVNMIEEDRYCVDISTQILSCIGQLKKANIDILNGHLRT 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C A+ + + IEE+I+ +
Sbjct 61 CVKHAIENDNADEKIEEVINII 82
>gi|228994796|ref|ZP_04154594.1| hypothetical protein bpmyx0001_54590 [Bacillus pseudomycoides
DSM 12442]
gi|228764904|gb|EEM13660.1| hypothetical protein bpmyx0001_54590 [Bacillus pseudomycoides
DSM 12442]
Length=101
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 54/85 (64%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 17 EKEQIMNRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGILKNHTNHCVS 76
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ DG+G AI EL+ +F+ A
Sbjct 77 NAIKDGNGDEAIGELMKVFERFSKA 101
>gi|229086298|ref|ZP_04218476.1| hypothetical protein bcere0022_28850 [Bacillus cereus Rock3-44]
gi|228696993|gb|EEL49800.1| hypothetical protein bcere0022_28850 [Bacillus cereus Rock3-44]
Length=103
Score = 73.6 bits (179), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 19 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTNHCVS 78
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ +G+G AIEEL+ +F+ A
Sbjct 79 GAIKNGNGDEAIEELMTVFERFSKA 103
>gi|293375800|ref|ZP_06622070.1| conserved hypothetical protein [Turicibacter sanguinis PC909]
gi|325840772|ref|ZP_08167136.1| putative copper-sensing transcriptional repressor CsoR [Turicibacter
sp. HGF1]
gi|292645577|gb|EFF63617.1| conserved hypothetical protein [Turicibacter sanguinis PC909]
gi|325490142|gb|EGC92479.1| putative copper-sensing transcriptional repressor CsoR [Turicibacter
sp. HGF1]
Length=88
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/79 (38%), Positives = 52/79 (66%), Gaps = 0/79 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ +++ AL LKT +G +DGI++M+E + YC+D+ QI A Q+ L+R+N ++L HL
Sbjct 1 MNEERKKALQSLKTAKGQIDGIIKMIEEERYCMDISNQIVAAQALLKRSNLLILKQHLNH 60
Query 65 CFSTAVLDGHGQAAIEELI 83
C AV++G I+E++
Sbjct 61 CVKQAVINGESDEKIDEIM 79
>gi|298246205|ref|ZP_06970011.1| protein of unknown function DUF156 [Ktedonobacter racemifer DSM
44963]
gi|297553686|gb|EFH87551.1| protein of unknown function DUF156 [Ktedonobacter racemifer DSM
44963]
Length=88
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/79 (40%), Positives = 53/79 (68%), Gaps = 0/79 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ A+K+ L RL + GH+ GI +M+E D YCVDV++Q AV+ ++E+ +++L HLE+
Sbjct 1 MKAEKQDVLKRLNYIEGHIAGIRKMVEEDKYCVDVLRQTHAVRKAIEKLEQLILSGHLES 60
Query 65 CFSTAVLDGHGQAAIEELI 83
C + +G +A I+EL+
Sbjct 61 CVVEGIKEGREEAVIDELL 79
>gi|222097187|ref|YP_002531244.1| hypothetical protein BCQ_3527 [Bacillus cereus Q1]
gi|229197839|ref|ZP_04324555.1| hypothetical protein bcere0001_33750 [Bacillus cereus m1293]
gi|221241245|gb|ACM13955.1| conserved hypothetical protein [Bacillus cereus Q1]
gi|228585557|gb|EEK43659.1| hypothetical protein bcere0001_33750 [Bacillus cereus m1293]
Length=100
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ +G+G AIEEL+ +F+ A
Sbjct 76 GAIKNGNGDEAIEELMTVFERFSKA 100
>gi|75759839|ref|ZP_00739914.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218898830|ref|YP_002447241.1| hypothetical protein BCG9842_B1470 [Bacillus cereus G9842]
gi|228902234|ref|ZP_04066394.1| hypothetical protein bthur0014_34120 [Bacillus thuringiensis
IBL 4222]
gi|228966654|ref|ZP_04127700.1| hypothetical protein bthur0004_34610 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74492655|gb|EAO55796.1| Hypothetical cytosolic protein [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218544119|gb|ACK96513.1| conserved hypothetical protein [Bacillus cereus G9842]
gi|228793030|gb|EEM40586.1| hypothetical protein bthur0004_34610 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228857349|gb|EEN01849.1| hypothetical protein bthur0014_34120 [Bacillus thuringiensis
IBL 4222]
Length=100
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ +G+G AIEEL+ +F+ A
Sbjct 76 GAIKNGNGDEAIEELMTVFERFSKA 100
>gi|228922446|ref|ZP_04085748.1| hypothetical protein bthur0011_34330 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228837160|gb|EEM82499.1| hypothetical protein bthur0011_34330 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length=100
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (65%), Gaps = 1/85 (1%)
Query 8 KKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLETCFS 67
+K +NRLK + G + GI M+E+D YCVD++ QISA+ +++++ +L NH C S
Sbjct 16 EKEQIINRLKRIEGQVRGIQNMIENDRYCVDILVQISAINAAMKKVGMGVLKNHTSHCVS 75
Query 68 TAVLDGHGQAAIEELIDAV-KFTPA 91
A+ +G+G AIEEL+ +F+ A
Sbjct 76 GAIKNGNGDEAIEELMTVFERFSKA 100
>gi|153953431|ref|YP_001394196.1| hypothetical protein CKL_0795 [Clostridium kluyveri DSM 555]
gi|219854055|ref|YP_002471177.1| hypothetical protein CKR_0712 [Clostridium kluyveri NBRC 12016]
gi|146346312|gb|EDK32848.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219567779|dbj|BAH05763.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length=90
Score = 73.2 bits (178), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/80 (39%), Positives = 51/80 (64%), Gaps = 0/80 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+ +K+ A LKT +G ++GI++M+E+ YC+D+ QI A Q+ L+RAN ++L HL
Sbjct 1 MNEEKKKAFQALKTSKGQIEGIMKMIENGRYCIDISNQIIAAQALLKRANLLILKQHLNH 60
Query 65 CFSTAVLDGHGQAAIEELID 84
C A L G+ +EE++D
Sbjct 61 CVKEAFLQNTGEEKVEEIVD 80
>gi|341591197|gb|EGS34405.1| hypothetical protein HMPREF9489_1239 [Finegoldia magna SY403409CC001050417]
Length=87
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/82 (42%), Positives = 52/82 (64%), Gaps = 0/82 (0%)
Query 5 LTAKKRAALNRLKTVRGHLDGIVRMLESDAYCVDVMKQISAVQSSLERANRVMLHNHLET 64
+T K+ AL ++KTVRG LD IV M+E D YCVD+ QI + L++AN +L+ H+ T
Sbjct 1 MTEHKQKALKKIKTVRGQLDAIVNMIEEDRYCVDISTQILSCIGQLKKANIDILNGHMRT 60
Query 65 CFSTAVLDGHGQAAIEELIDAV 86
C A+ + + IEE+I+ +
Sbjct 61 CVKHAIENDNADEKIEEVINII 82
Lambda K H
0.316 0.129 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 129033565320
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40