BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0978c Length=331 Score E Sequences producing significant alignments: (Bits) Value gi|57116806|ref|YP_177774.1| PE-PGRS family protein [Mycobacteri... 614 7e-174 gi|339293982|gb|AEJ46093.1| PE-PGRS family protein [Mycobacteriu... 613 9e-174 gi|339297622|gb|AEJ49732.1| PE-PGRS family protein [Mycobacteriu... 609 2e-172 gi|294996470|ref|ZP_06802161.1| PE-PGRS family protein [Mycobact... 418 5e-115 gi|297730488|ref|ZP_06959606.1| PE-PGRS family protein [Mycobact... 357 2e-96 gi|148822187|ref|YP_001286941.1| PE-PGRS family protein [Mycobac... 357 2e-96 gi|340625990|ref|YP_004744442.1| PE-PGRS family protein [Mycobac... 342 5e-92 gi|308371138|ref|ZP_07423950.2| hypothetical protein TMCG_04105 ... 284 2e-74 gi|289761114|ref|ZP_06520492.1| PE-PGRS family protein [Mycobact... 284 2e-74 gi|289442400|ref|ZP_06432144.1| PE-PGRS faily protein [Mycobacte... 268 1e-69 gi|289442397|ref|ZP_06432141.1| PE-PGRS family protein [Mycobact... 259 4e-67 gi|289751241|ref|ZP_06510619.1| PE-PGRS family protein [Mycobact... 258 7e-67 gi|306802648|ref|ZP_07439316.1| hypothetical protein TMHG_00152 ... 236 3e-60 gi|289744710|ref|ZP_06504088.1| PE-PGRS family protein [Mycobact... 232 7e-59 gi|289757063|ref|ZP_06516441.1| predicted protein [Mycobacterium... 230 2e-58 gi|306967026|ref|ZP_07479687.1| hypothetical protein TMIG_03538 ... 227 2e-57 gi|306792362|ref|ZP_07430664.1| LOW QUALITY PROTEIN: hypothetica... 227 2e-57 gi|306775111|ref|ZP_07413448.1| hypothetical protein TMAG_00915 ... 227 2e-57 gi|289568957|ref|ZP_06449184.1| predicted protein [Mycobacterium... 224 1e-56 gi|31793801|ref|NP_856294.1| PE-PGRS family protein [Mycobacteri... 216 5e-54 gi|313657819|ref|ZP_07814699.1| PE_PGRS family protein [Mycobact... 205 7e-51 gi|253799992|ref|YP_003032993.1| PE-PGRS family protein [Mycobac... 205 9e-51 gi|328459734|gb|AEB05157.1| hypothetical protein TBSG_03028 [Myc... 205 9e-51 gi|297633505|ref|ZP_06951285.1| PE-PGRS family protein [Mycobact... 204 1e-50 gi|297730490|ref|ZP_06959608.1| PE-PGRS family protein [Mycobact... 204 1e-50 gi|323718767|gb|EGB27925.1| PE-PGRS family protein [Mycobacteriu... 204 2e-50 gi|307080581|ref|ZP_07489751.1| putative PE family protein [Myco... 204 2e-50 gi|308378034|ref|ZP_07481327.2| putative PE family protein [Myco... 203 2e-50 gi|306804239|ref|ZP_07440907.1| putative PE family protein [Myco... 203 2e-50 gi|308372254|ref|ZP_07427989.2| putative PE family protein [Myco... 203 3e-50 gi|289575327|ref|ZP_06455554.1| PE-PGRS family protein [Mycobact... 203 3e-50 gi|254551667|ref|ZP_05142114.1| PE-PGRS family protein [Mycobact... 203 3e-50 gi|308405925|ref|ZP_07494454.2| putative PE family protein [Myco... 203 3e-50 gi|339295493|gb|AEJ47604.1| PE-PGRS family protein [Mycobacteriu... 203 4e-50 gi|326904796|gb|EGE51729.1| LOW QUALITY PROTEIN: PE-PGRS family ... 203 4e-50 gi|148822189|ref|YP_001286943.1| PE-PGRS family protein [Mycobac... 202 5e-50 gi|57117008|ref|YP_177895.1| PE-PGRS family protein [Mycobacteri... 202 5e-50 gi|289444156|ref|ZP_06433900.1| PE PGRS domain-containing protei... 202 6e-50 gi|15842155|ref|NP_337192.1| PE_PGRS family protein [Mycobacteri... 202 6e-50 gi|121636907|ref|YP_977130.1| PE-PGRS family protein [Mycobacter... 202 6e-50 gi|313659555|ref|ZP_07816435.1| PE-PGRS family protein [Mycobact... 202 7e-50 gi|31792170|ref|NP_854663.1| PE-PGRS family protein [Mycobacteri... 202 8e-50 gi|308231688|ref|ZP_07413452.2| PE-PGRS family protein [Mycobact... 201 9e-50 gi|294994275|ref|ZP_06799966.1| PE-PGRS family protein [Mycobact... 201 1e-49 gi|339293983|gb|AEJ46094.1| PE_PGRS family protein [Mycobacteriu... 201 1e-49 gi|294996472|ref|ZP_06802163.1| PE-PGRS family protein [Mycobact... 201 1e-49 gi|339297623|gb|AEJ49733.1| PE_PGRS family protein [Mycobacteriu... 201 2e-49 gi|308379218|ref|ZP_07485532.2| putative PE family protein [Myco... 201 2e-49 gi|289753037|ref|ZP_06512415.1| PE-PGRS family protein [Mycobact... 201 2e-49 gi|339632644|ref|YP_004724286.1| PE-PGRS family protein [Mycobac... 201 2e-49 >gi|57116806|ref|YP_177774.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148660758|ref|YP_001282281.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|7476129|pir||F70820 hypothetical glycine-rich protein Rv0978c - Mycobacterium tuberculosis (strain H37RV) gi|41353628|emb|CAE55343.1| PE-PGRS FAMILY PROTEIN [Mycobacterium tuberculosis H37Rv] gi|148504910|gb|ABQ72719.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] Length=331 Score = 614 bits (1583), Expect = 7e-174, Method: Compositional matrix adjust. Identities = 331/331 (100%), Positives = 331/331 (100%), Gaps = 0/331 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG Sbjct 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 Query 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT Sbjct 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 Query 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT Sbjct 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 Query 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 >gi|339293982|gb|AEJ46093.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=346 Score = 613 bits (1582), Expect = 9e-174, Method: Compositional matrix adjust. Identities = 331/331 (100%), Positives = 331/331 (100%), Gaps = 0/331 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG Sbjct 136 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 195 Query 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT Sbjct 196 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 255 Query 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT Sbjct 256 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 315 Query 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 316 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 346 >gi|339297622|gb|AEJ49732.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=346 Score = 609 bits (1571), Expect = 2e-172, Method: Compositional matrix adjust. Identities = 328/331 (99%), Positives = 329/331 (99%), Gaps = 0/331 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG Sbjct 136 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 195 Query 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGN+YVTNFGS T Sbjct 196 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNIYVTNFGSDT 255 Query 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT Sbjct 256 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 315 Query 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 316 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 346 >gi|294996470|ref|ZP_06802161.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=335 Score = 418 bits (1075), Expect = 5e-115, Method: Compositional matrix adjust. Identities = 312/335 (94%), Positives = 317/335 (95%), Gaps = 4/335 (1%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNV----LDAINAPVQSLTGRPL 116 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQ + L IN P ++L GR L Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQQIEQALLGVINTPTEALVGRKL 120 Query 117 IGDGANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSL 176 IGDGA+G GTGQA G GG LWGNGGNGGSGAPGQAGGAGGA+GLI NGGAGGTGGAVSL Sbjct 121 IGDGAHGAPGTGQARGAGGILWGNGGNGGSGAPGQAGGAGGASGLIDNGGAGGTGGAVSL 180 Query 177 ARAGTAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNF 236 ARAGTAGGA RGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNF Sbjct 181 ARAGTAGGADRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNF 240 Query 237 GSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTG 296 GSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTG Sbjct 241 GSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTG 300 Query 297 SPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 SPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 301 SPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 335 >gi|297730488|ref|ZP_06959606.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=328 Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 289/331 (88%), Positives = 292/331 (89%), Gaps = 18/331 (5%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQ I Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQQ-----------------IEQA 118 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 G+ T G L G+G +G G GQAGGAGGAAGLIGNGGAGGTGGAVSLARAG Sbjct 119 LLGVINTPTEALVGRKLIGDGAHGAPGT-GQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 177 Query 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT Sbjct 178 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 237 Query 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT Sbjct 238 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 297 Query 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 298 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 328 >gi|148822187|ref|YP_001286941.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|297633503|ref|ZP_06951283.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] gi|313657817|ref|ZP_07814697.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] gi|148720714|gb|ABR05339.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=313 Score = 357 bits (915), Expect = 2e-96, Method: Compositional matrix adjust. Identities = 289/331 (88%), Positives = 292/331 (89%), Gaps = 18/331 (5%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQ I Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQQ-----------------IEQA 103 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 180 G+ T G L G+G +G G GQAGGAGGAAGLIGNGGAGGTGGAVSLARAG Sbjct 104 LLGVINTPTEALVGRKLIGDGAHGAPGT-GQAGGAGGAAGLIGNGGAGGTGGAVSLARAG 162 Query 181 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 240 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT Sbjct 163 TAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGT 222 Query 241 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 300 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT Sbjct 223 VSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPIT 282 Query 301 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 283 VGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 313 >gi|340625990|ref|YP_004744442.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] gi|340004180|emb|CCC43319.1| PE-PGRS family protein [Mycobacterium canettii CIPT 140010059] Length=327 Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust. Identities = 287/332 (87%), Positives = 295/332 (89%), Gaps = 6/332 (1%) Query 1 MSFVNVAPQLVSTAAADAARIGS-AINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQ 59 MSFVNVAPQLVSTAAADAARIGS AAAATTQVLAAA DEVSTAIAALF SHGQ Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAAATTQVLAAAHDEVSTAIAALFASHGQ 60 Query 60 HYQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGD 119 HYQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGD Sbjct 61 HYQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGD 120 Query 120 GANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARA 179 GANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGG GGAVSLARA Sbjct 121 GANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGAGGAVSLARA 180 Query 180 GTAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSG 239 GTAGGAG G +GG GG GG GGA GA +THASFNDPHGVAVNPGGNVYVTN GS Sbjct 181 GTAGGAGG---GPVGGIGGTGGVGGAGGAAGAVTHASFNDPHGVAVNPGGNVYVTNQGSN 237 Query 240 TVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPI 299 TVSVI+PATNTVTGS IT+G P GVAV+P G V+VTNF+S TVSVIDPTTNTVTGSPI Sbjct 238 TVSVIDPATNTVTGS-ITVGITPLGVAVNP-GGNVYVTNFNSGTVSVIDPTTNTVTGSPI 295 Query 300 TVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 TVG +P GVAVNPVTGEVYVTNFAGDTVSV S Sbjct 296 TVGASPLGVAVNPVTGEVYVTNFAGDTVSVTS 327 >gi|308371138|ref|ZP_07423950.2| hypothetical protein TMCG_04105 [Mycobacterium tuberculosis SUMu003] gi|308329718|gb|EFP18569.1| hypothetical protein TMCG_04105 [Mycobacterium tuberculosis SUMu003] Length=162 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSG 147 ANGIDGTGQAGGNGGWLWGNGGNGGSG Sbjct 136 ANGIDGTGQAGGNGGWLWGNGGNGGSG 162 >gi|289761114|ref|ZP_06520492.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503] gi|289708620|gb|EFD72636.1| PE-PGRS family protein [Mycobacterium tuberculosis GM 1503] Length=163 Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/147 (100%), Positives = 147/147 (100%), Gaps = 0/147 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSG 147 ANGIDGTGQAGGNGGWLWGNGGNGGSG Sbjct 136 ANGIDGTGQAGGNGGWLWGNGGNGGSG 162 >gi|289442400|ref|ZP_06432144.1| PE-PGRS faily protein [Mycobacterium tuberculosis T46] gi|289415319|gb|EFD12559.1| PE-PGRS faily protein [Mycobacterium tuberculosis T46] Length=139 Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 137/139 (99%), Positives = 138/139 (99%), Gaps = 0/139 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGIDGTGQAGGNGGWLWG 139 ANGIDGTGQAGGNGGWLWG Sbjct 121 ANGIDGTGQAGGNGGWLWG 139 >gi|289442397|ref|ZP_06432141.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] gi|289415316|gb|EFD12556.1| PE-PGRS family protein [Mycobacterium tuberculosis T46] Length=186 Score = 259 bits (662), Expect = 4e-67, Method: Compositional matrix adjust. Identities = 173/187 (93%), Positives = 174/187 (94%), Gaps = 1/187 (0%) Query 145 GSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAGTAGGAGRGPVGGIGGAGGVGGAGG 204 GSG P + GA GLIGN GAGGTG AVSL RAGTAGG RGPVGGIGGAGGVGGAGG Sbjct 1 GSGHPDRPAAQRGA-GLIGNDGAGGTGDAVSLGRAGTAGGDRRGPVGGIGGAGGVGGAGG 59 Query 205 AAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSG 264 AAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSG Sbjct 60 AAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSG 119 Query 265 VAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAG 324 VAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAG Sbjct 120 VAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAG 179 Query 325 DTVSVIS 331 DTVSVIS Sbjct 180 DTVSVIS 186 >gi|289751241|ref|ZP_06510619.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] gi|289691828|gb|EFD59257.1| PE-PGRS family protein [Mycobacterium tuberculosis T92] Length=150 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 135/135 (100%), Positives = 135/135 (100%), Gaps = 0/135 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGG 135 ANGIDGTGQAGGNGG Sbjct 136 ANGIDGTGQAGGNGG 150 >gi|306802648|ref|ZP_07439316.1| hypothetical protein TMHG_00152 [Mycobacterium tuberculosis SUMu008] gi|308350630|gb|EFP39481.1| hypothetical protein TMHG_00152 [Mycobacterium tuberculosis SUMu008] Length=128 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%) Query 204 GAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPS 263 GAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPS Sbjct 1 GAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPS 60 Query 264 GVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFA 323 GVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFA Sbjct 61 GVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFA 120 Query 324 GDTVSVIS 331 GDTVSVIS Sbjct 121 GDTVSVIS 128 >gi|289744710|ref|ZP_06504088.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] gi|289685238|gb|EFD52726.1| PE-PGRS family protein [Mycobacterium tuberculosis 02_1987] Length=171 Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 156/159 (99%), Positives = 159/159 (100%), Gaps = 0/159 (0%) Query 173 AVSLARAGTAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVY 232 A+S+ARAGT+GGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVY Sbjct 13 AISIARAGTSGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVY 72 Query 233 VTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTN 292 VTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTN Sbjct 73 VTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTN 132 Query 293 TVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 TVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS Sbjct 133 TVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 171 >gi|289757063|ref|ZP_06516441.1| predicted protein [Mycobacterium tuberculosis T85] gi|289712627|gb|EFD76639.1| predicted protein [Mycobacterium tuberculosis T85] Length=186 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 210 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 269 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP Sbjct 65 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 124 Query 270 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 329 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV Sbjct 125 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 184 Query 330 IS 331 IS Sbjct 185 IS 186 >gi|306967026|ref|ZP_07479687.1| hypothetical protein TMIG_03538 [Mycobacterium tuberculosis SUMu009] gi|308355290|gb|EFP44141.1| hypothetical protein TMIG_03538 [Mycobacterium tuberculosis SUMu009] Length=144 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 210 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 269 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP Sbjct 23 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 82 Query 270 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 329 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV Sbjct 83 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 142 Query 330 IS 331 IS Sbjct 143 IS 144 >gi|306792362|ref|ZP_07430664.1| LOW QUALITY PROTEIN: hypothetical protein TMEG_00863 [Mycobacterium tuberculosis SUMu005] gi|306971217|ref|ZP_07483878.1| hypothetical protein TMJG_02646 [Mycobacterium tuberculosis SUMu010] gi|308339156|gb|EFP28007.1| LOW QUALITY PROTEIN: hypothetical protein TMEG_00863 [Mycobacterium tuberculosis SUMu005] gi|308359244|gb|EFP48095.1| hypothetical protein TMJG_02646 [Mycobacterium tuberculosis SUMu010] Length=141 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 210 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 269 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP Sbjct 20 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 79 Query 270 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 329 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV Sbjct 80 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 139 Query 330 IS 331 IS Sbjct 140 IS 141 >gi|306775111|ref|ZP_07413448.1| hypothetical protein TMAG_00915 [Mycobacterium tuberculosis SUMu001] gi|308216350|gb|EFO75749.1| hypothetical protein TMAG_00915 [Mycobacterium tuberculosis SUMu001] Length=137 Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 210 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 269 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP Sbjct 16 TTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSP 75 Query 270 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 329 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV Sbjct 76 VTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSV 135 Query 330 IS 331 IS Sbjct 136 IS 137 >gi|289568957|ref|ZP_06449184.1| predicted protein [Mycobacterium tuberculosis T17] gi|289542711|gb|EFD46359.1| predicted protein [Mycobacterium tuberculosis T17] Length=172 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 148/156 (95%), Positives = 151/156 (97%), Gaps = 0/156 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAG 156 ANGIDGTGQAGGNGGW+ GNGG GGS PG+AGGAG Sbjct 136 ANGIDGTGQAGGNGGWMCGNGGFGGSLVPGKAGGAG 171 >gi|31793801|ref|NP_856294.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31619395|emb|CAD94833.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=464 Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVL AAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLVAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|313657819|ref|ZP_07814699.1| PE_PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=457 Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 107/164 (66%), Positives = 110/164 (68%), Gaps = 42/164 (25%) Query 209 VTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVS 268 VTTITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVS Sbjct 283 VTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVS 341 Query 269 PVTGLVFVTNFDSNTVSVIDPTTNTVTGS------------------------------- 297 PVTGLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 342 PVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVI 401 Query 298 ----------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 402 DPATNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|253799992|ref|YP_003032993.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289555238|ref|ZP_06444448.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 605] gi|253321495|gb|ACT26098.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289439870|gb|EFD22363.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 605] Length=457 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/164 (66%), Positives = 110/164 (68%), Gaps = 42/164 (25%) Query 209 VTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVS 268 VTTITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVS Sbjct 283 VTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVS 341 Query 269 PVTGLVFVTNFDSNTVSVIDPTTNTVTGS------------------------------- 297 PVTGLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 342 PVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVI 401 Query 298 ----------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 402 DPATNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|328459734|gb|AEB05157.1| hypothetical protein TBSG_03028 [Mycobacterium tuberculosis KZN 4207] Length=472 Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/164 (66%), Positives = 110/164 (68%), Gaps = 42/164 (25%) Query 209 VTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVS 268 VTTITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVS Sbjct 298 VTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVS 356 Query 269 PVTGLVFVTNFDSNTVSVIDPTTNTVTGS------------------------------- 297 PVTGLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 357 PVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVI 416 Query 298 ----------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 417 DPATNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 460 >gi|297633505|ref|ZP_06951285.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 4207] Length=457 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 286 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 344 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 345 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 404 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 405 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|297730490|ref|ZP_06959608.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] Length=472 Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 301 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 359 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 360 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 419 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 420 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 460 >gi|323718767|gb|EGB27925.1| PE-PGRS family protein [Mycobacterium tuberculosis CDC1551A] Length=187 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|307080581|ref|ZP_07489751.1| putative PE family protein [Mycobacterium tuberculosis SUMu011] gi|308375905|ref|ZP_07445480.2| putative PE family protein [Mycobacterium tuberculosis SUMu007] gi|308344847|gb|EFP33698.1| putative PE family protein [Mycobacterium tuberculosis SUMu007] gi|308361667|gb|EFP50518.1| putative PE family protein [Mycobacterium tuberculosis SUMu011] Length=182 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|308378034|ref|ZP_07481327.2| putative PE family protein [Mycobacterium tuberculosis SUMu009] gi|308353756|gb|EFP42607.1| putative PE family protein [Mycobacterium tuberculosis SUMu009] Length=203 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|306804239|ref|ZP_07440907.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] gi|308349161|gb|EFP38012.1| putative PE family protein [Mycobacterium tuberculosis SUMu008] Length=202 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|308372254|ref|ZP_07427989.2| putative PE family protein [Mycobacterium tuberculosis SUMu004] gi|308333859|gb|EFP22710.1| putative PE family protein [Mycobacterium tuberculosis SUMu004] Length=192 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|289575327|ref|ZP_06455554.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] gi|289539758|gb|EFD44336.1| PE-PGRS family protein [Mycobacterium tuberculosis K85] Length=261 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|254551667|ref|ZP_05142114.1| PE-PGRS family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=468 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|308405925|ref|ZP_07494454.2| putative PE family protein [Mycobacterium tuberculosis SUMu012] gi|308365117|gb|EFP53968.1| putative PE family protein [Mycobacterium tuberculosis SUMu012] Length=206 Score = 203 bits (516), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|339295493|gb|AEJ47604.1| PE-PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=261 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQERFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|326904796|gb|EGE51729.1| LOW QUALITY PROTEIN: PE-PGRS family protein [Mycobacterium tuberculosis W-148] Length=202 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|148822189|ref|YP_001286943.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] gi|148720716|gb|ABR05341.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] Length=457 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAA DEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAHDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 286 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 344 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 345 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 404 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 405 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|57117008|ref|YP_177895.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Rv] gi|148662455|ref|YP_001283978.1| PE-PGRS family protein [Mycobacterium tuberculosis H37Ra] gi|148823809|ref|YP_001288563.1| PE-PGRS family protein [Mycobacterium tuberculosis F11] 6 more sequence titles Length=461 Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|289444156|ref|ZP_06433900.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis T46] gi|289754735|ref|ZP_06514113.1| predicted protein [Mycobacterium tuberculosis EAS054] gi|289417075|gb|EFD14315.1| PE PGRS domain-containing protein [Mycobacterium tuberculosis T46] gi|289695322|gb|EFD62751.1| predicted protein [Mycobacterium tuberculosis EAS054] Length=479 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|15842155|ref|NP_337192.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|253798302|ref|YP_003031303.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289553595|ref|ZP_06442805.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|297732220|ref|ZP_06961338.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN R506] gi|13882441|gb|AAK47006.1| PE_PGRS family protein [Mycobacterium tuberculosis CDC1551] gi|253319805|gb|ACT24408.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN 1435] gi|289438227|gb|EFD20720.1| predicted protein [Mycobacterium tuberculosis KZN 605] gi|328458072|gb|AEB03495.1| hypothetical protein TBSG_01366 [Mycobacterium tuberculosis KZN 4207] Length=476 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|121636907|ref|YP_977130.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989379|ref|YP_002644066.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492554|emb|CAL71022.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772492|dbj|BAH25298.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600923|emb|CCC63594.1| PE-PGRS family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=457 Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/164 (66%), Positives = 110/164 (68%), Gaps = 42/164 (25%) Query 209 VTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVS 268 VTTITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVS Sbjct 283 VTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVS 341 Query 269 PVTGLVFVTNFDSNTVSVIDPTTNTVTGS------------------------------- 297 PVTGLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 342 PVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVI 401 Query 298 ----------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 402 DPATNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|313659555|ref|ZP_07816435.1| PE-PGRS family protein [Mycobacterium tuberculosis KZN V2475] Length=461 Score = 202 bits (513), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 125/125 (100%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|31792170|ref|NP_854663.1| PE-PGRS family protein [Mycobacterium bovis AF2122/97] gi|31617758|emb|CAD93867.1| PE-PGRS FAMILY PROTEIN [Mycobacterium bovis AF2122/97] Length=457 Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 286 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 344 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 345 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 404 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 405 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|308231688|ref|ZP_07413452.2| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] gi|308216322|gb|EFO75721.1| PE-PGRS family protein [Mycobacterium tuberculosis SUMu001] Length=183 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|294994275|ref|ZP_06799966.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] Length=461 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 125/125 (100%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|339293983|gb|AEJ46094.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5079] Length=472 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 123/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAA DEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAHDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 107/164 (66%), Positives = 110/164 (68%), Gaps = 42/164 (25%) Query 209 VTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVS 268 VTTITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVS Sbjct 298 VTTITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVS 356 Query 269 PVTGLVFVTNFDSNTVSVIDPTTNTVTGS------------------------------- 297 PVTGLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 357 PVTGLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVI 416 Query 298 ----------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 417 DPATNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 460 >gi|294996472|ref|ZP_06802163.1| PE-PGRS family protein [Mycobacterium tuberculosis 210] gi|326904794|gb|EGE51727.1| PE-PGRS family protein [Mycobacterium tuberculosis W-148] Length=457 Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 123/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAA DEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAHDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 286 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 344 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 345 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 404 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 405 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 445 >gi|339297623|gb|AEJ49733.1| PE_PGRS family protein [Mycobacterium tuberculosis CCDC5180] Length=472 Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 123/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAA DEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAHDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 104/161 (65%), Positives = 107/161 (67%), Gaps = 42/161 (26%) Query 212 ITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVT 271 ITHASFNDPHGVAVNPGGN+YVTN GS TVSVI+P TNTVTGS IT GNGPSGVAVSPVT Sbjct 301 ITHASFNDPHGVAVNPGGNIYVTNQGSNTVSVIDPVTNTVTGS-ITDGNGPSGVAVSPVT 359 Query 272 GLVFVTNFDSNTVSVIDPTTNTVTGS---------------------------------- 297 GLVFVTNFDSNTVSVIDP TNTVTGS Sbjct 360 GLVFVTNFDSNTVSVIDPNTNTVTGSIPVGTGAYGVAVNPGGNIYVTNQFSNTVSVIDPA 419 Query 298 -------PITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS 331 PI VG PTGVAVNPVTG VYVTN DTVSVI+ Sbjct 420 TNTVTGSPIPVGLDPTGVAVNPVTGVVYVTNSLDDTVSVIT 460 >gi|308379218|ref|ZP_07485532.2| putative PE family protein [Mycobacterium tuberculosis SUMu010] gi|308357725|gb|EFP46576.1| putative PE family protein [Mycobacterium tuberculosis SUMu010] Length=214 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 16 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 75 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 76 YQAISAQVAAYQQRFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 135 Query 121 ANGID 125 ANGID Sbjct 136 ANGID 140 >gi|289753037|ref|ZP_06512415.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] gi|289693624|gb|EFD61053.1| PE-PGRS family protein [Mycobacterium tuberculosis EAS054] Length=236 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 123/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQ+RFVLALSQA STYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQERFVLALSQASSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 >gi|339632644|ref|YP_004724286.1| PE-PGRS family protein [Mycobacterium africanum GM041182] gi|339332000|emb|CCC27704.1| PE-PGRS family protein [Mycobacterium africanum GM041182] Length=464 Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 124/125 (99%), Positives = 124/125 (99%), Gaps = 0/125 (0%) Query 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQH 60 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAA DEVSTAIAALFGSHGQH Sbjct 1 MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAHDEVSTAIAALFGSHGQH 60 Query 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG Sbjct 61 YQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDG 120 Query 121 ANGID 125 ANGID Sbjct 121 ANGID 125 Lambda K H 0.310 0.129 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 589755449788 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40