BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0981
Length=228
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608121|ref|NP_215496.1| two component response transcriptio... 448 3e-124
gi|308397855|ref|ZP_07492623.2| mycobacterial persistence regula... 446 9e-124
gi|31792171|ref|NP_854664.1| two component response transcriptio... 446 1e-123
gi|41407014|ref|NP_959850.1| hypothetical protein MAP0916 [Mycob... 435 2e-120
gi|240169348|ref|ZP_04748007.1| mycobacterial persistence regula... 434 3e-120
gi|254823447|ref|ZP_05228448.1| two component response transcrip... 430 7e-119
gi|296169791|ref|ZP_06851406.1| DNA-binding response regulator [... 427 6e-118
gi|342860579|ref|ZP_08717230.1| two component response transcrip... 426 9e-118
gi|183984499|ref|YP_001852790.1| two component response transcri... 425 3e-117
gi|4455703|emb|CAB36688.1| putative two-component response regul... 422 1e-116
gi|118619772|ref|YP_908104.1| two component response transcripti... 421 3e-116
gi|15826987|ref|NP_301250.1| two-component response regulator [M... 420 8e-116
gi|120405794|ref|YP_955623.1| two component transcriptional regu... 410 8e-113
gi|118473019|ref|YP_889726.1| DNA-binding response regulator [My... 409 1e-112
gi|108801265|ref|YP_641462.1| two component transcriptional regu... 409 2e-112
gi|145222477|ref|YP_001133155.1| two component transcriptional r... 408 2e-112
gi|333989572|ref|YP_004522186.1| two component response transcri... 405 3e-111
gi|169628171|ref|YP_001701820.1| two component response transcri... 396 1e-108
gi|296140967|ref|YP_003648210.1| winged helix family two compone... 379 1e-103
gi|226307885|ref|YP_002767845.1| two-component response regulato... 358 5e-97
gi|226365094|ref|YP_002782877.1| two-component response regulato... 357 1e-96
gi|213966092|ref|ZP_03394280.1| two-component system response re... 356 1e-96
gi|312138612|ref|YP_004005948.1| two component system response r... 356 2e-96
gi|111022588|ref|YP_705560.1| response regulator (protein-glutam... 356 2e-96
gi|326383751|ref|ZP_08205436.1| two-component response regulator... 353 8e-96
gi|54026938|ref|YP_121180.1| putative two-component system respo... 353 1e-95
gi|262201364|ref|YP_003272572.1| response regulator receiver [Go... 350 8e-95
gi|343925198|ref|ZP_08764725.1| two-component response regulator... 348 3e-94
gi|317506815|ref|ZP_07964589.1| response regulator receiver doma... 344 5e-93
gi|38233451|ref|NP_939218.1| putative two component system respo... 338 3e-91
gi|172040225|ref|YP_001799939.1| two-component system response r... 337 8e-91
gi|334563962|ref|ZP_08516953.1| two-component system response re... 336 2e-90
gi|225023059|ref|ZP_03712251.1| hypothetical protein CORMATOL_03... 335 2e-90
gi|260577819|ref|ZP_05845753.1| DNA-binding response regulator [... 335 4e-90
gi|300790141|ref|YP_003770432.1| two-component system response r... 334 5e-90
gi|68536618|ref|YP_251323.1| two-component system response regul... 334 6e-90
gi|300858078|ref|YP_003783061.1| two-component system transcript... 333 1e-89
gi|134097367|ref|YP_001103028.1| putative two-component system r... 333 1e-89
gi|325002312|ref|ZP_08123424.1| two component response transcrip... 332 2e-89
gi|296393679|ref|YP_003658563.1| transcriptional regulator [Segn... 332 3e-89
gi|302530375|ref|ZP_07282717.1| phosphate regulon transcriptiona... 331 5e-89
gi|333921225|ref|YP_004494806.1| Response regulator mprA [Amycol... 330 9e-89
gi|227832653|ref|YP_002834360.1| two-component system response r... 328 3e-88
gi|257057242|ref|YP_003135074.1| response regulator with CheY-li... 328 4e-88
gi|227487786|ref|ZP_03918102.1| response regulator [Corynebacter... 328 5e-88
gi|145295044|ref|YP_001137865.1| hypothetical protein cgR_0988 [... 327 1e-87
gi|344043616|gb|EGV39305.1| hypothetical protein CgS9114_13920 [... 326 1e-87
gi|300781686|ref|ZP_07091540.1| response regulator [Corynebacter... 325 3e-87
gi|256374761|ref|YP_003098421.1| winged helix family two compone... 325 4e-87
gi|331694656|ref|YP_004330895.1| winged helix family two compone... 325 4e-87
>gi|15608121|ref|NP_215496.1| two component response transcriptional regulatory protein MprA
[Mycobacterium tuberculosis H37Rv]
gi|15840406|ref|NP_335443.1| DNA-binding response regulator [Mycobacterium tuberculosis CDC1551]
gi|148660762|ref|YP_001282285.1| two component response transcriptional regulatory protein MprA
[Mycobacterium tuberculosis H37Ra]
55 more sequence titles
Length=230
Score = 448 bits (1152), Expect = 3e-124, Method: Compositional matrix adjust.
Identities = 228/228 (100%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 63 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 122
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 123 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 182
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 183 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 230
>gi|308397855|ref|ZP_07492623.2| mycobacterial persistence regulator mprA [Mycobacterium tuberculosis
SUMu012]
gi|308366785|gb|EFP55636.1| mycobacterial persistence regulator mprA [Mycobacterium tuberculosis
SUMu012]
Length=228
Score = 446 bits (1148), Expect = 9e-124, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 228/228 (100%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|31792171|ref|NP_854664.1| two component response transcriptional regulatory protein MprA
[Mycobacterium bovis AF2122/97]
gi|121636908|ref|YP_977131.1| two component response transcriptional regulatory protein MprA
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224989380|ref|YP_002644067.1| mycobacterial persistence regulator [Mycobacterium bovis BCG
str. Tokyo 172]
25 more sequence titles
Length=230
Score = 446 bits (1147), Expect = 1e-123, Method: Compositional matrix adjust.
Identities = 227/228 (99%), Positives = 227/228 (99%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 122
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 123 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 182
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 183 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 230
>gi|41407014|ref|NP_959850.1| hypothetical protein MAP0916 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118464125|ref|YP_880347.1| two component response transcriptional regulator MprA [Mycobacterium
avium 104]
gi|254773974|ref|ZP_05215490.1| two component response transcriptional regulatory protein MprA
[Mycobacterium avium subsp. avium ATCC 25291]
gi|81700688|sp|Q742C1.1|MPRA_MYCPA RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|160012422|sp|A0QBQ9.1|MPRA_MYCA1 RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|41395365|gb|AAS03233.1| hypothetical protein MAP_0916 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|118165412|gb|ABK66309.1| mycobacterial persistence regulator mrpa [Mycobacterium avium
104]
gi|336461410|gb|EGO40281.1| response regulator with CheY-like receiver domain-containing
protein [Mycobacterium avium subsp. paratuberculosis S397]
Length=228
Score = 435 bits (1119), Expect = 2e-120, Method: Compositional matrix adjust.
Identities = 222/228 (98%), Positives = 224/228 (99%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PED AES+AM FSDLTLDPVTREV RGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 121 PEDDAESVAMTFSDLTLDPVTREVTRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|240169348|ref|ZP_04748007.1| mycobacterial persistence regulator [Mycobacterium kansasii ATCC
12478]
Length=228
Score = 434 bits (1117), Expect = 3e-120, Method: Compositional matrix adjust.
Identities = 220/228 (97%), Positives = 225/228 (99%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDG+EALDMIASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGLEALDMIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+D AES+AMRFSDL+LDPVTREV RGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 121 PDDTAESVAMRFSDLSLDPVTREVTRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|254823447|ref|ZP_05228448.1| two component response transcriptional regulatory protein MprA
[Mycobacterium intracellulare ATCC 13950]
Length=228
Score = 430 bits (1106), Expect = 7e-119, Method: Compositional matrix adjust.
Identities = 218/228 (96%), Positives = 224/228 (99%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEAL++IASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALELIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PED AES+AM+FSDLTLDPVTREV RG+RRISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 121 PEDEAESVAMKFSDLTLDPVTREVTRGERRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 181 VWGFDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGVGYVLRETPP 228
>gi|296169791|ref|ZP_06851406.1| DNA-binding response regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895585|gb|EFG75284.1| DNA-binding response regulator [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=229
Score = 427 bits (1098), Expect = 6e-118, Method: Compositional matrix adjust.
Identities = 218/229 (96%), Positives = 225/229 (99%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDG+EAL+MIASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGLEALEMIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDA-AESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
P+D AES+AM+FSDLTLDPVTREV RGQR+ISLTRTEFALLEMLIANPRRVLTRSRILE
Sbjct 121 PDDEDAESVAMKFSDLTLDPVTREVTRGQRQISLTRTEFALLEMLIANPRRVLTRSRILE 180
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 229
>gi|342860579|ref|ZP_08717230.1| two component response transcriptional regulator MprA [Mycobacterium
colombiense CECT 3035]
gi|342132234|gb|EGT85475.1| two component response transcriptional regulator MprA [Mycobacterium
colombiense CECT 3035]
Length=229
Score = 426 bits (1096), Expect = 9e-118, Method: Compositional matrix adjust.
Identities = 219/229 (96%), Positives = 224/229 (98%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEAL++IASDRPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALELIASDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
Query 121 PEDA-AESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
PED A+S+AM FSDLTLDPVTREV RGQRRISLTRTEFALLEMLIANPRRVLTRSRILE
Sbjct 121 PEDEDADSVAMTFSDLTLDPVTREVTRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 180
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 229
>gi|183984499|ref|YP_001852790.1| two component response transcriptional regulatory protein MprA
[Mycobacterium marinum M]
gi|183177825|gb|ACC42935.1| mycobacterial persistence regulator MprA [Mycobacterium marinum
M]
Length=232
Score = 425 bits (1092), Expect = 3e-117, Method: Compositional matrix adjust.
Identities = 218/230 (95%), Positives = 224/230 (98%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGY+VELAHDGVEAL+MIASDRPDALVLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYTVELAHDGVEALEMIASDRPDALVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 122
Query 121 PED--AAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
PED AA+S+AM FSDL+LDPVTREV RG RRISLTRTEFALLEMLIANPRRVLTRSRIL
Sbjct 123 PEDDEAADSVAMTFSDLSLDPVTREVTRGARRISLTRTEFALLEMLIANPRRVLTRSRIL 182
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWGFDFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 183 EEVWGFDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 232
>gi|4455703|emb|CAB36688.1| putative two-component response regulator [Mycobacterium leprae]
Length=253
Score = 422 bits (1086), Expect = 1e-116, Method: Compositional matrix adjust.
Identities = 215/228 (95%), Positives = 221/228 (97%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRIL VDDDRAVRESLRRSLSFNGYSVELA+DGVEAL+M+A DRPDALVLDVMMPRLDGL
Sbjct 26 VRILAVDDDRAVRESLRRSLSFNGYSVELANDGVEALEMVARDRPDALVLDVMMPRLDGL 85
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLAR+RALLRRTK
Sbjct 86 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARIRALLRRTK 145
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+DAAES+AM FSDLTLDPVTREV RGQR ISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 146 PDDAAESVAMSFSDLTLDPVTREVARGQRWISLTRTEFALLEMLIANPRRVLTRSRILEE 205
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 206 VWGFDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGVGYVLRETPP 253
>gi|118619772|ref|YP_908104.1| two component response transcriptional regulatory protein MprA
[Mycobacterium ulcerans Agy99]
gi|160012527|sp|A0PWB4.1|MPRA_MYCUA RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|118571882|gb|ABL06633.1| mycobacterial persistence regulator MprA [Mycobacterium ulcerans
Agy99]
Length=232
Score = 421 bits (1083), Expect = 3e-116, Method: Compositional matrix adjust.
Identities = 217/230 (95%), Positives = 223/230 (97%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGY+VELAHDGVEAL+MIASDRPDALVLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYTVELAHDGVEALEMIASDRPDALVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 122
Query 121 PED--AAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
ED AA+S+AM FSDL+LDPVTREV RG RRISLTRTEFALLEMLIANPRRVLTRSRIL
Sbjct 123 LEDDEAADSVAMTFSDLSLDPVTREVTRGARRISLTRTEFALLEMLIANPRRVLTRSRIL 182
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWGFDFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 183 EEVWGFDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 232
>gi|15826987|ref|NP_301250.1| two-component response regulator [Mycobacterium leprae TN]
gi|221229465|ref|YP_002502881.1| putative two-component response regulator [Mycobacterium leprae
Br4923]
gi|81856515|sp|Q9CD68.1|MPRA_MYCLE RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|13092534|emb|CAC29682.1| putative two-component response regulator [Mycobacterium leprae]
gi|219932572|emb|CAR70267.1| putative two-component response regulator [Mycobacterium leprae
Br4923]
Length=228
Score = 420 bits (1080), Expect = 8e-116, Method: Compositional matrix adjust.
Identities = 214/228 (94%), Positives = 221/228 (97%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RIL VDDDRAVRESLRRSLSFNGYSVELA+DGVEAL+M+A DRPDALVLDVMMPRLDGL
Sbjct 1 MRILAVDDDRAVRESLRRSLSFNGYSVELANDGVEALEMVARDRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLAR+RALLRRTK
Sbjct 61 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARIRALLRRTK 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+DAAES+AM FSDLTLDPVTREV RGQR ISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 121 PDDAAESVAMSFSDLTLDPVTREVARGQRWISLTRTEFALLEMLIANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 181 VWGFDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGVGYVLRETPP 228
>gi|120405794|ref|YP_955623.1| two component transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|160012530|sp|A1TEL7.1|MPRA_MYCVP RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|119958612|gb|ABM15617.1| two component transcriptional regulator, winged helix family
[Mycobacterium vanbaalenii PYR-1]
Length=231
Score = 410 bits (1054), Expect = 8e-113, Method: Compositional matrix adjust.
Identities = 212/229 (93%), Positives = 218/229 (96%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELA DG EALD+IASDRPDA+VLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAQDGREALDLIASDRPDAVVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTT 122
Query 121 PED-AAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
P+D A ES AM FSDL+LDPVTREV RG R ISLTRTEF+LLEMLIANPRRVLTRSRILE
Sbjct 123 PDDGAGESAAMTFSDLSLDPVTREVTRGDRPISLTRTEFSLLEMLIANPRRVLTRSRILE 182
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWGFDFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 183 EVWGFDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 231
>gi|118473019|ref|YP_889726.1| DNA-binding response regulator [Mycobacterium smegmatis str.
MC2 155]
gi|160012470|sp|A0R3I8.1|MPRA_MYCS2 RecName: Full=Response regulator mprA; AltName: Full=Mycobacterial
persistence regulator A
gi|118174306|gb|ABK75202.1| DNA-binding response regulator [Mycobacterium smegmatis str.
MC2 155]
Length=230
Score = 409 bits (1051), Expect = 1e-112, Method: Compositional matrix adjust.
Identities = 206/228 (91%), Positives = 216/228 (95%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELA DGVEALD I ++RPDAL+LDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDAITNNRPDALILDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTV 122
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
+D+ +S M FSDLTLDPVTREV RG R+ISLTRTEF+LLEMLIANPRRVLTRSRILEE
Sbjct 123 SDDSGDSQKMTFSDLTLDPVTREVTRGGRQISLTRTEFSLLEMLIANPRRVLTRSRILEE 182
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVY+GYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 183 VWGFDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 230
>gi|108801265|ref|YP_641462.1| two component transcriptional regulator [Mycobacterium sp. MCS]
gi|119870416|ref|YP_940368.1| two component transcriptional regulator [Mycobacterium sp. KMS]
gi|126437246|ref|YP_001072937.1| two component transcriptional regulator [Mycobacterium sp. JLS]
6 more sequence titles
Length=230
Score = 409 bits (1050), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 207/228 (91%), Positives = 217/228 (96%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELA DGVEALD+IA++RPDA+VLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAQDGVEALDLIANNRPDAVVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTS 122
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P++ +S A+ F DLTLDPVTREV RG R+ISLTRTEFALLEMLIANPRRVLTRSRILEE
Sbjct 123 PDEGPDSPALTFLDLTLDPVTREVTRGSRQISLTRTEFALLEMLIANPRRVLTRSRILEE 182
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVY+GYLRRKTEA GEPRLIHTVRGVGYVLRETPP
Sbjct 183 VWGFDFPTSGNALEVYIGYLRRKTEASGEPRLIHTVRGVGYVLRETPP 230
>gi|145222477|ref|YP_001133155.1| two component transcriptional regulator [Mycobacterium gilvum
PYR-GCK]
gi|315442922|ref|YP_004075801.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
gi|145214963|gb|ABP44367.1| two component transcriptional regulator, winged helix family
[Mycobacterium gilvum PYR-GCK]
gi|315261225|gb|ADT97966.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium sp. Spyr1]
Length=231
Score = 408 bits (1049), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 211/229 (93%), Positives = 215/229 (94%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSVELA DG EALD+IASDRPDA+VLDVMMPRLDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAQDGREALDLIASDRPDAVVLDVMMPRLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 63 EVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTS 122
Query 121 PEDA-AESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
P D ES AM FSDLTLDPVTREV RG R ISLTRTEF+LLEMLI NPRRVLTRSRILE
Sbjct 123 PVDGDGESAAMTFSDLTLDPVTREVTRGNRSISLTRTEFSLLEMLITNPRRVLTRSRILE 182
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWGFDFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 183 EVWGFDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 231
>gi|333989572|ref|YP_004522186.1| two component response transcriptional regulatory protein MprA
[Mycobacterium sp. JDM601]
gi|333485540|gb|AEF34932.1| two component response transcriptional regulatory protein MprA
[Mycobacterium sp. JDM601]
Length=230
Score = 405 bits (1040), Expect = 3e-111, Method: Compositional matrix adjust.
Identities = 203/227 (90%), Positives = 216/227 (96%), Gaps = 0/227 (0%)
Query 2 RILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLE 61
R+LVVDDDRAVRESLRRSLSFNGYSV LA DGVEAL+ I+++RPDA++LDVMMPRLDGLE
Sbjct 4 RVLVVDDDRAVRESLRRSLSFNGYSVSLATDGVEALEAISNERPDAMILDVMMPRLDGLE 63
Query 62 VCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKP 121
VCRQLR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 64 VCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTTA 123
Query 122 EDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEEV 181
ED +ES+AM F DLTLDPVTREV RG R+ISLTRTEFALLEMLIANPRRVLTRSRILEEV
Sbjct 124 EDLSESVAMSFEDLTLDPVTREVTRGDRQISLTRTEFALLEMLIANPRRVLTRSRILEEV 183
Query 182 WGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
WGFDFPTSGNALEVY+GYLRRKTEA+GEPRLI+TVRGVGYVLRETPP
Sbjct 184 WGFDFPTSGNALEVYIGYLRRKTEAEGEPRLIYTVRGVGYVLRETPP 230
>gi|169628171|ref|YP_001701820.1| two component response transcriptional regulatory protein MprA
[Mycobacterium abscessus ATCC 19977]
gi|169240138|emb|CAM61166.1| Mycobacterial persistence regulator MrpA (two component response
transcriptional regulatory protein) [Mycobacterium abscessus]
Length=230
Score = 396 bits (1018), Expect = 1e-108, Method: Compositional matrix adjust.
Identities = 201/228 (89%), Positives = 217/228 (96%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
VRILVVDDDRAVRESLRRSLSFNGYSV+LA DGV+AL++IA+DRPDALVLDVMMP+LDGL
Sbjct 3 VRILVVDDDRAVRESLRRSLSFNGYSVDLAEDGVDALNVIANDRPDALVLDVMMPKLDGL 62
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRT
Sbjct 63 EVCRRLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTT 122
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
+++A++ + F DLTLDPVTREV+RG R ISLTRTEFALLEML+ANPRRVLTRSRILEE
Sbjct 123 IDESADAATLSFGDLTLDPVTREVHRGTRSISLTRTEFALLEMLMANPRRVLTRSRILEE 182
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWGFDFPTSGNALEVYVGYLRRKTEA+GE RLIHTVRGVGYVLRETPP
Sbjct 183 VWGFDFPTSGNALEVYVGYLRRKTEAEGELRLIHTVRGVGYVLRETPP 230
>gi|296140967|ref|YP_003648210.1| winged helix family two component transcriptional regulator [Tsukamurella
paurometabola DSM 20162]
gi|296029101|gb|ADG79871.1| two component transcriptional regulator, winged helix family
[Tsukamurella paurometabola DSM 20162]
Length=228
Score = 379 bits (974), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 191/228 (84%), Positives = 209/228 (92%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL+FNGY V+ A DG +ALD IAS+RPDALVLD+ MPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLTFNGYQVDTAVDGQDALDHIASNRPDALVLDLNMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARD VS+RV+GLDAGADDYLPKPFALEELLARMRALLRR
Sbjct 61 EVCRRLRSAGDDLPILVLTARDGVSDRVSGLDAGADDYLPKPFALEELLARMRALLRRAV 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+ A+++ +RF DLTLDP TREV+RG R ISLTRTEF+LLEML+ NPRRVLTRSRILEE
Sbjct 121 PDTASDNEVLRFEDLTLDPATREVSRGDRSISLTRTEFSLLEMLMGNPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|226307885|ref|YP_002767845.1| two-component response regulator MprA [Rhodococcus erythropolis
PR4]
gi|229495087|ref|ZP_04388833.1| response regulator [Rhodococcus erythropolis SK121]
gi|226187002|dbj|BAH35106.1| two-component response regulator MprA [Rhodococcus erythropolis
PR4]
gi|229318018|gb|EEN83893.1| response regulator [Rhodococcus erythropolis SK121]
Length=228
Score = 358 bits (918), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 197/228 (87%), Positives = 213/228 (94%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGY+VELA DG++AL+ I ++RPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYTVELAVDGLDALEKILANRPDAVVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLAR+RALLRRT
Sbjct 61 EVCRRLRSAGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRTA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+ A+S M F DLTLDPVTREV RG+R ISLTRTEF+LLEML+ANPRRVLTR RILEE
Sbjct 121 PDLDADSEMMAFEDLTLDPVTREVKRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|226365094|ref|YP_002782877.1| two-component response regulator MprA [Rhodococcus opacus B4]
gi|226243584|dbj|BAH53932.1| two-component response regulator MprA [Rhodococcus opacus B4]
Length=228
Score = 357 bits (915), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/228 (86%), Positives = 211/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELA DG++AL+ +A+ RPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAVDGIDALEKVANARPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARDSVSERV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSTGDDLPILVLTARDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PE +S M F DLTLDPVTREV RG+R ISLTRTEF+LLEML+ANPRRVLTR RILEE
Sbjct 121 PEPGIDSEKMTFEDLTLDPVTREVTRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGE RL+HTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGETRLLHTVRGVGYVLRETPP 228
>gi|213966092|ref|ZP_03394280.1| two-component system response regulator TcsR5 [Corynebacterium
amycolatum SK46]
gi|213951290|gb|EEB62684.1| two-component system response regulator TcsR5 [Corynebacterium
amycolatum SK46]
Length=230
Score = 356 bits (914), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 176/230 (77%), Positives = 209/230 (91%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDDD+AVRE+LRRSL+FNGY+VELA DG EAL+ IA DRPD +LDVMMP+LDGL
Sbjct 1 MKILVVDDDQAVREALRRSLTFNGYTVELAEDGAEALEKIAKDRPDLAILDVMMPKLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
+VCR+LR GDDLP+++LTARDSVSERVAGLDAGADDYLPKPFALEELLAR+R+LLRR+
Sbjct 61 DVCRRLRSEGDDLPVMMLTARDSVSERVAGLDAGADDYLPKPFALEELLARVRSLLRRSA 120
Query 121 PEDAA--ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
E A ++ ++F DL+LDP TREV RG+RRISLTRTEFALLE+L++NPRRVL+R+ IL
Sbjct 121 LEVPAMEDAATLQFEDLSLDPETREVFRGERRISLTRTEFALLELLMSNPRRVLSRTAIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
E+VWG+DFPTSGNALEVY+GYLRRKTEA+GEPRLIHTVRGVGYV+RET P
Sbjct 181 EDVWGYDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGVGYVMRETAP 230
>gi|312138612|ref|YP_004005948.1| two component system response regulator [Rhodococcus equi 103S]
gi|325676321|ref|ZP_08156000.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
gi|311887951|emb|CBH47263.1| two component system response regulator [Rhodococcus equi 103S]
gi|325552882|gb|EGD22565.1| DNA-binding response regulator [Rhodococcus equi ATCC 33707]
Length=228
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 198/228 (87%), Positives = 212/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGY+V+LA DG++AL+ +A+ RPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYTVDLAVDGMDALEKVAASRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P +S AM F DLTLDPVTREV RG R ISLTRTEFALLEML+ANPRRVL+RSRILEE
Sbjct 121 PAAGDDSEAMTFEDLTLDPVTREVTRGGRSISLTRTEFALLEMLMANPRRVLSRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
>gi|111022588|ref|YP_705560.1| response regulator (protein-glutamate methylesterase) [Rhodococcus
jostii RHA1]
gi|110822118|gb|ABG97402.1| response regulator (protein-glutamate methylesterase) [Rhodococcus
jostii RHA1]
Length=228
Score = 356 bits (913), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 195/228 (86%), Positives = 211/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGYSVELA DG++AL+ +A+ RPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYSVELAVDGIDALEKVANARPDAIVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARDSVSERV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSTGDDLPILVLTARDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PE +S M F DLTLDPVTREV RG+R ISLTRTEF+LLEML+ANPRRVLTR RILEE
Sbjct 121 PEPGIDSEKMTFEDLTLDPVTREVTRGERSISLTRTEFSLLEMLMANPRRVLTRGRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGE RL+HTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGETRLLHTVRGVGYVLRETPP 228
>gi|326383751|ref|ZP_08205436.1| two-component response regulator MprA [Gordonia neofelifaecis
NRRL B-59395]
gi|326197515|gb|EGD54704.1| two-component response regulator MprA [Gordonia neofelifaecis
NRRL B-59395]
Length=227
Score = 353 bits (907), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 190/228 (84%), Positives = 211/228 (93%), Gaps = 1/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGY+VE A DG+EAL+ + ++RPD +VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYTVETAGDGLEALEKVIAERPDLMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARDSVSERV+GLDAGADDYLPKPFALEELLAR+R+LLRRT
Sbjct 61 EVCRRLRSAGDDLPILVLTARDSVSERVSGLDAGADDYLPKPFALEELLARLRSLLRRTT 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
D ES A+ F+DLTLDPVTREV RG+R+ISLTRTEFALLEML++NP+RVLTRSRILEE
Sbjct 121 -RDEEESEAVSFADLTLDPVTREVTRGERQISLTRTEFALLEMLMSNPKRVLTRSRILEE 179
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVY+GYLRRKTEADGEPRLIHTVRGVGYVLRE P
Sbjct 180 VWGYDFPTSGNALEVYIGYLRRKTEADGEPRLIHTVRGVGYVLREGTP 227
>gi|54026938|ref|YP_121180.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
gi|54018446|dbj|BAD59816.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
Length=228
Score = 353 bits (906), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/228 (85%), Positives = 212/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL+FNGY+V+LA DGV+AL+ + RPDALVLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLTFNGYTVDLAVDGVDALEKATAQRPDALVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARLRALLRRRA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P+ S +RF+DL+LDPVTREV+RG R ISLTRTEF+LLEML+ANPRRVLTRSRILEE
Sbjct 121 PDPGDTSETLRFADLSLDPVTREVSRGDRAISLTRTEFSLLEMLMANPRRVLTRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVY+GYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 228
>gi|262201364|ref|YP_003272572.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|262084711|gb|ACY20679.1| response regulator receiver [Gordonia bronchialis DSM 43247]
Length=228
Score = 350 bits (898), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 189/228 (83%), Positives = 212/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL+FNGY+V+ A DG+EAL+ I SDRPD ++DVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLTFNGYAVDTAGDGIEALEKIVSDRPDVAIMDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARD+VSERV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSAGDDLPILVLTARDTVSERVSGLDAGADDYLPKPFALEELLARLRALLRRAV 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
P++ A+S +RF+DL+LDPVTR+V+RG R ISLTRTEFALLEML+ANPRRVL+RSRILEE
Sbjct 121 PDEEADSETLRFADLSLDPVTRDVSRGDRHISLTRTEFALLEMLMANPRRVLSRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGEDRLIHTVRGVGYVLRETPP 228
>gi|343925198|ref|ZP_08764725.1| two-component response regulator MprA [Gordonia alkanivorans
NBRC 16433]
gi|343764795|dbj|GAA11651.1| two-component response regulator MprA [Gordonia alkanivorans
NBRC 16433]
Length=228
Score = 348 bits (894), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 190/228 (84%), Positives = 210/228 (93%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL+FNGY+VE A DG+EAL+ I +DRPD ++LDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLTFNGYTVETAGDGIEALEKILADRPDVVILDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARDSVSERV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSAGDDLPILVLTARDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
PE +S + F+DL+LDPVTR+V RG+R ISLTRTEFALLEML+ANPRRVL+RSRILEE
Sbjct 121 PEGDIDSETLTFADLSLDPVTRDVTRGERPISLTRTEFALLEMLMANPRRVLSRSRILEE 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEADGESRLIHTVRGVGYVLRETPP 228
>gi|317506815|ref|ZP_07964589.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316254889|gb|EFV14185.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length=228
Score = 344 bits (883), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 184/226 (82%), Positives = 203/226 (90%), Gaps = 0/226 (0%)
Query 3 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 62
ILVVDDDRAVR+SLRRSLSFNGYSV A +G+EAL I DRPDA+VLDVMMP LDGLEV
Sbjct 3 ILVVDDDRAVRDSLRRSLSFNGYSVRTAENGIEALSQILEDRPDAMVLDVMMPGLDGLEV 62
Query 63 CRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKPE 122
CR+LRG+GDDLPILVLTARD+VSERVAGLDAGADDYLPKPFALEELLAR+RALLRR P+
Sbjct 63 CRRLRGSGDDLPILVLTARDTVSERVAGLDAGADDYLPKPFALEELLARVRALLRRRTPQ 122
Query 123 DAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEEVW 182
A+ F DL+LDP TR+V RG+R ISLTRTEFALLEML+ NPRRVLTR+R+LEEVW
Sbjct 123 LEPGVEALTFQDLSLDPATRDVRRGEREISLTRTEFALLEMLMENPRRVLTRTRLLEEVW 182
Query 183 GFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
G+DFPTSGNALEVY+GYLRRKTEA+GE RLIHTVRGVGYVLRETPP
Sbjct 183 GYDFPTSGNALEVYIGYLRRKTEAEGENRLIHTVRGVGYVLRETPP 228
>gi|38233451|ref|NP_939218.1| putative two component system response regulator [Corynebacterium
diphtheriae NCTC 13129]
gi|38199711|emb|CAE49371.1| Putative two component system response regulator [Corynebacterium
diphtheriae]
Length=230
Score = 338 bits (867), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 169/230 (74%), Positives = 199/230 (87%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++I+VVDD++AVRESL RSLSFNGY V LA DGVEAL++I ++P+ ++LDVMMPR+DGL
Sbjct 1 MKIVVVDDEQAVRESLCRSLSFNGYEVHLAQDGVEALEVIEREQPELVILDVMMPRMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LRG+GDD PILVLTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+LLRR
Sbjct 61 EVCRTLRGSGDDRPILVLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLLRRAA 120
Query 121 PED--AAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
E + + F DL L+P TR+V RG R ISLTRTEFALL++L+AN RRVL+R+ IL
Sbjct 121 AESVGSGSQGELSFEDLRLNPDTRDVTRGGRPISLTRTEFALLQLLMANSRRVLSRASIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG+DFPTSGNALEVY+GYLRRKTE++GEPRLIHTVRGVGYVLRET P
Sbjct 181 EEVWGYDFPTSGNALEVYIGYLRRKTESEGEPRLIHTVRGVGYVLRETAP 230
>gi|172040225|ref|YP_001799939.1| two-component system response regulator MprA [Corynebacterium
urealyticum DSM 7109]
gi|171851529|emb|CAQ04505.1| two-component system response regulator MprA [Corynebacterium
urealyticum DSM 7109]
Length=231
Score = 337 bits (864), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 170/231 (74%), Positives = 197/231 (86%), Gaps = 3/231 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDDD AVRESLRRSL FNGYS+ LA DG EAL + S+RPD ++LDVMMP+LDGL
Sbjct 1 MKILVVDDDPAVRESLRRSLIFNGYSIVLAADGEEALAKVQSERPDMVILDVMMPKLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR G+D PIL+LTARDSVSERVAGLDAGADDYL KPFALEELLAR R+L+RR
Sbjct 61 EVCRELRSQGEDTPILLLTARDSVSERVAGLDAGADDYLTKPFALEELLARTRSLVRRAA 120
Query 121 PEDAAESMA---MRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRI 177
A ++ ++F DL LDP TR+V RG R+ISLTRTEFALLE+L+ NPR+VL+R+ I
Sbjct 121 RPAAVDTQQIEILKFEDLELDPATRDVTRGGRQISLTRTEFALLELLLRNPRKVLSRTTI 180
Query 178 LEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
LE+VWG+DFPTSGNALEVY+GYLRRKTEADGEPRLI TVRGVGYVLRET P
Sbjct 181 LEDVWGYDFPTSGNALEVYIGYLRRKTEADGEPRLIQTVRGVGYVLRETAP 231
>gi|334563962|ref|ZP_08516953.1| two-component system response regulator TcsR5 [Corynebacterium
bovis DSM 20582]
Length=231
Score = 336 bits (861), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 172/231 (75%), Positives = 198/231 (86%), Gaps = 3/231 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDDD+AVRESLRRSL+FNGY+V LA DG + L+ I S+RPD VLDVMMPRLDGL
Sbjct 1 MKILVVDDDQAVRESLRRSLTFNGYTVVLAVDGEDGLEKIRSERPDLAVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDD+PIL+LTARDSVSERVAGLDAGADDYLPKPFALEELLAR+R+L RR
Sbjct 61 EVCRELRSHGDDVPILLLTARDSVSERVAGLDAGADDYLPKPFALEELLARVRSLFRRAA 120
Query 121 PEDAAE---SMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRI 177
E + + F DLTL+P TR+V RG+R ISLTRTEF+LLE+L+ N R+VL+R+ I
Sbjct 121 RPAVVEGERTEPLTFEDLTLNPETRDVTRGERAISLTRTEFSLLELLMRNQRKVLSRNAI 180
Query 178 LEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
LEEVWG+DFPTSGNALEVY+GYLRRKTEADGE RLIHTVRGVGYVLRET P
Sbjct 181 LEEVWGYDFPTSGNALEVYIGYLRRKTEADGESRLIHTVRGVGYVLRETAP 231
>gi|225023059|ref|ZP_03712251.1| hypothetical protein CORMATOL_03107 [Corynebacterium matruchotii
ATCC 33806]
gi|305682004|ref|ZP_07404808.1| response regulator MprA [Corynebacterium matruchotii ATCC 14266]
gi|224944282|gb|EEG25491.1| hypothetical protein CORMATOL_03107 [Corynebacterium matruchotii
ATCC 33806]
gi|305658477|gb|EFM47980.1| response regulator MprA [Corynebacterium matruchotii ATCC 14266]
Length=230
Score = 335 bits (860), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 166/230 (73%), Positives = 197/230 (86%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++I+VVDD++AVR+SLRRSLSFNGY + +A DG +ALD+I ++PD ++LDVMMP++DGL
Sbjct 1 MKIVVVDDEQAVRDSLRRSLSFNGYDIAIAEDGEQALDVIEKEQPDLVILDVMMPKMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR GDD PILVLTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+LLRR
Sbjct 61 EVCRHLRSHGDDRPILVLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLLRRAA 120
Query 121 PEDAAESMA--MRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
E + S + F DL L+P TR+V RG R ISLTRTEFALL++L+ NPRRVL+RS IL
Sbjct 121 AEASGPSSQAEITFEDLKLNPDTRDVVRGNRTISLTRTEFALLQLLMTNPRRVLSRSTIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG+DFPTSGNALEVY+GYLRRKTE +GEPRLIHTVRGVGYVLR+T P
Sbjct 181 EEVWGYDFPTSGNALEVYIGYLRRKTEQEGEPRLIHTVRGVGYVLRDTAP 230
>gi|260577819|ref|ZP_05845753.1| DNA-binding response regulator [Corynebacterium jeikeium ATCC
43734]
gi|258604046|gb|EEW17289.1| DNA-binding response regulator [Corynebacterium jeikeium ATCC
43734]
Length=234
Score = 335 bits (858), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 170/231 (74%), Positives = 197/231 (86%), Gaps = 3/231 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDDD+AVRESLRRSL FNGY+V LA DG EAL +IA +RPD +LDVMMP+ DGL
Sbjct 4 MKILVVDDDQAVRESLRRSLIFNGYTVILATDGEEALKLIAEERPDLAILDVMMPKKDGL 63
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRR-T 119
+VCR+LR GDDLPIL+LTARDSV ERVAGLDAGADDYLPKPFALEELLAR R+L RR
Sbjct 64 DVCRELRSHGDDLPILLLTARDSVEERVAGLDAGADDYLPKPFALEELLARTRSLFRRAA 123
Query 120 KP--EDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRI 177
+P ++ +RF DLTL+P TR+V RG R+ISLTRTEFALLE+L+ NPR+VL+R+ I
Sbjct 124 RPAIQEGETREPLRFEDLTLNPETRDVFRGDRQISLTRTEFALLELLMNNPRKVLSRNTI 183
Query 178 LEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
LEEVWG+DFPTSGNALEVY+GYLRRKTEA+ E RLIHTVRGVGY LRET P
Sbjct 184 LEEVWGYDFPTSGNALEVYIGYLRRKTEANNETRLIHTVRGVGYALRETAP 234
>gi|300790141|ref|YP_003770432.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|299799655|gb|ADJ50030.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|340531821|gb|AEK47026.1| two-component system response regulator [Amycolatopsis mediterranei
S699]
Length=230
Score = 334 bits (857), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 185/230 (81%), Positives = 205/230 (90%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL FNGY V+LA DG +AL+ I +DRPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLEFNGYQVQLASDGAQALEAIIADRPDAMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EV R+LR TGDDLPILVLTARD+VS+RV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVARRLRSTGDDLPILVLTARDTVSDRVSGLDAGADDYLPKPFALEELLARLRALLRRAI 120
Query 121 PE--DAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
PE + S A+ F+DLTLDP TREV RG R ISLTRTEFALLE+ ++ P+ VLTR RIL
Sbjct 121 PEGQNGQASEALAFADLTLDPGTREVRRGGREISLTRTEFALLELFLSYPKHVLTRGRIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG+DFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 181 EEVWGYDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 230
>gi|68536618|ref|YP_251323.1| two-component system response regulator TcsR5 [Corynebacterium
jeikeium K411]
gi|68264217|emb|CAI37705.1| two-component system response regulator TcsR5 [Corynebacterium
jeikeium K411]
Length=231
Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 170/231 (74%), Positives = 197/231 (86%), Gaps = 3/231 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDDD+AVRESLRRSL FNGY+V LA DG EAL +IA +RPD +LDVMMP+ DGL
Sbjct 1 MKILVVDDDQAVRESLRRSLIFNGYTVILATDGEEALKLIAEERPDLAILDVMMPKKDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRR-T 119
+VCR+LR GDDLPIL+LTARDSV ERVAGLDAGADDYLPKPFALEELLAR R+L RR
Sbjct 61 DVCRELRSHGDDLPILLLTARDSVEERVAGLDAGADDYLPKPFALEELLARTRSLFRRAA 120
Query 120 KP--EDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRI 177
+P ++ +RF DLTL+P TR+V RG R+ISLTRTEFALLE+L+ NPR+VL+R+ I
Sbjct 121 RPAIQEGETREPLRFEDLTLNPETRDVFRGDRQISLTRTEFALLELLMNNPRKVLSRNTI 180
Query 178 LEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
LEEVWG+DFPTSGNALEVY+GYLRRKTEA+ E RLIHTVRGVGY LRET P
Sbjct 181 LEEVWGYDFPTSGNALEVYIGYLRRKTEANNETRLIHTVRGVGYALRETAP 231
>gi|300858078|ref|YP_003783061.1| two-component system transcriptional regulatory protein [Corynebacterium
pseudotuberculosis FRC41]
gi|337290326|ref|YP_004629347.1| two-component system transcriptional regulator [Corynebacterium
ulcerans BR-AD22]
gi|300685532|gb|ADK28454.1| two-component system transcriptional regulatory protein [Corynebacterium
pseudotuberculosis FRC41]
6 more sequence titles
Length=230
Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 167/230 (73%), Positives = 197/230 (86%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++I+VVDD++AVRESLRRSLSFNGY V LA DGV+AL++I ++P+ ++LDVMMPR+DGL
Sbjct 1 MKIVVVDDEQAVRESLRRSLSFNGYDVFLAEDGVQALEVIEKEQPELVILDVMMPRMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR GDD PILVLTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+LLRR
Sbjct 61 EVCRTLRSAGDDRPILVLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLLRRAA 120
Query 121 PEDAA--ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
+ + F DL L+P TR+V RG R ISLTRTEFALL++L+AN RRVL+RS IL
Sbjct 121 ADAVGGPSQGELTFDDLKLNPDTRDVTRGGRHISLTRTEFALLQLLMANARRVLSRSTIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG+DFPTSGNALEVY+GYLRRKTE++GEPRLIHTVRGVGYVLR+T P
Sbjct 181 EEVWGYDFPTSGNALEVYIGYLRRKTESEGEPRLIHTVRGVGYVLRDTAP 230
>gi|134097367|ref|YP_001103028.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
gi|291009075|ref|ZP_06567048.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
gi|133909990|emb|CAM00102.1| putative two-component system response regulator [Saccharopolyspora
erythraea NRRL 2338]
Length=231
Score = 333 bits (854), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 185/231 (81%), Positives = 207/231 (90%), Gaps = 3/231 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL FNGY VELA DG +ALD +A+ RPDA+VLDVMMPR+DGL
Sbjct 1 MRILVVDDDRAVRESLRRSLQFNGYQVELAADGQQALDWLAAQRPDAMVLDVMMPRVDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EV R+LR TGDDLPILVLTARD+VS+RVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVARRLRSTGDDLPILVLTARDAVSDRVAGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 PEDAAES---MAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRI 177
P D +RFSDL LDP TREV RG+R ISLTRTEFALLE+L+A+P++VLTRSR+
Sbjct 121 PSDVDREDRPEPLRFSDLELDPGTREVRRGERPISLTRTEFALLELLMAHPKQVLTRSRL 180
Query 178 LEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
LE+VWG+DFPTSGNALEVY+GYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 181 LEDVWGYDFPTSGNALEVYIGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 231
>gi|325002312|ref|ZP_08123424.1| two component response transcriptional regulatory protein MprA
[Pseudonocardia sp. P1]
Length=232
Score = 332 bits (852), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 185/232 (80%), Positives = 211/232 (91%), Gaps = 4/232 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDD+AVR+SLRRSL+FNGY V+LA DG ALD + +DRPDALVLDVMMPR+DGL
Sbjct 1 MRILVVDDDKAVRDSLRRSLAFNGYQVDLAEDGQAALDRMLTDRPDALVLDVMMPRVDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GDDLPILVLTARD+VS+RVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSAGDDLPILVLTARDAVSDRVAGLDAGADDYLPKPFALEELLARLRALLRRRV 120
Query 121 P--EDAAE--SMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSR 176
P +D A+ S A+ F+DL+LDP TREV+RG R ISLTRTEF+LLE+L+A+PRRVLTR +
Sbjct 121 PDTDDGADPPSAALTFADLSLDPDTREVSRGGRSISLTRTEFSLLELLLAHPRRVLTRGQ 180
Query 177 ILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
ILE+VWG+DFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRE+PP
Sbjct 181 ILEQVWGYDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRESPP 232
>gi|296393679|ref|YP_003658563.1| transcriptional regulator [Segniliparus rotundus DSM 44985]
gi|296180826|gb|ADG97732.1| two component transcriptional regulator, winged helix family
[Segniliparus rotundus DSM 44985]
Length=228
Score = 332 bits (851), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 179/226 (80%), Positives = 197/226 (88%), Gaps = 0/226 (0%)
Query 3 ILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGLEV 62
ILVVDDDRAVR+SLRRSL FNGY+V A +G EAL + RPDA+VLDVMMP LDGLEV
Sbjct 3 ILVVDDDRAVRDSLRRSLLFNGYAVRTAENGAEALSQVLECRPDAMVLDVMMPGLDGLEV 62
Query 63 CRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTKPE 122
CR+LR GDDLPILVLTARD+VSERVAGLDAGADDYLPKPFALEELLAR+RALLRR P+
Sbjct 63 CRRLRSAGDDLPILVLTARDTVSERVAGLDAGADDYLPKPFALEELLARVRALLRRRTPQ 122
Query 123 DAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEEVW 182
+ + F DL+LDP TR+V RG R ISLTRTEFALLEML+ NPRRVLTR+R+LEEVW
Sbjct 123 AEPGAETLAFLDLSLDPATRDVRRGDREISLTRTEFALLEMLMENPRRVLTRTRLLEEVW 182
Query 183 GFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
G+DFPTSGNALEVY+GYLRRKTEADGE RLIHTVRGVGYVLRETPP
Sbjct 183 GYDFPTSGNALEVYIGYLRRKTEADGENRLIHTVRGVGYVLRETPP 228
>gi|302530375|ref|ZP_07282717.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
gi|302439270|gb|EFL11086.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
Length=230
Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 183/230 (80%), Positives = 204/230 (89%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL FNGY+VELA DG +AL+ I ++RPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLEFNGYTVELASDGAQALETILANRPDAMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EV R+LR TGDDLPILVLTARD+VS+RV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVARRLRSTGDDLPILVLTARDTVSDRVSGLDAGADDYLPKPFALEELLARLRALLRRAA 120
Query 121 P--EDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
P + S + F+DLTLDP TREV RG R ISLTRTEFALLE+ ++ P+ VLTR RIL
Sbjct 121 PDAQQGETSEVLSFADLTLDPGTREVRRGGREISLTRTEFALLELFLSYPKHVLTRGRIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG+DFPTSGNALEVYVGYLRRKTEA+GEPRLIHTVRGVGYVLRETPP
Sbjct 181 EEVWGYDFPTSGNALEVYVGYLRRKTEAEGEPRLIHTVRGVGYVLRETPP 230
>gi|333921225|ref|YP_004494806.1| Response regulator mprA [Amycolicicoccus subflavus DQS3-9A1]
gi|333483446|gb|AEF42006.1| Response regulator mprA [Amycolicicoccus subflavus DQS3-9A1]
Length=229
Score = 330 bits (846), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 181/229 (80%), Positives = 205/229 (90%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSLSFNGY+VELA DG +AL+ +A PDA+VLDVMMPR+DGL
Sbjct 1 MRILVVDDDRAVRESLRRSLSFNGYTVELAVDGADALEKVAEAPPDAIVLDVMMPRMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR GD+ PILVLTARDSVSERV+GLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRLRSQGDERPILVLTARDSVSERVSGLDAGADDYLPKPFALEELLARLRALLRRRA 120
Query 121 PEDAAESM-AMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
P + E + M F+ L +D VTREV R +R ISLTRTEF+LLEML+ANPRRVLTR+RILE
Sbjct 121 PHEGGEGVDTMEFAGLRMDLVTREVTRNERSISLTRTEFSLLEMLMANPRRVLTRARILE 180
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWG+DFPTSGNALEVY+GYLRRKTE++GEPR+IHTVRGVGYVLRETPP
Sbjct 181 EVWGYDFPTSGNALEVYIGYLRRKTESEGEPRIIHTVRGVGYVLRETPP 229
>gi|227832653|ref|YP_002834360.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
gi|262182862|ref|ZP_06042283.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
gi|227453669|gb|ACP32422.1| two-component system response regulator [Corynebacterium aurimucosum
ATCC 700975]
Length=232
Score = 328 bits (841), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/229 (72%), Positives = 192/229 (84%), Gaps = 4/229 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDD++AVRESLRRSL FNGY V LA DGV+A++M+ S+ P+ L+LDVMMP +DGL
Sbjct 1 MKILVVDDEQAVRESLRRSLKFNGYEVILAADGVQAVEMVHSEHPELLILDVMMPNMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR G D PILVLTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+L+RR
Sbjct 61 EVCRTLRSEGWDRPILVLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLVRRAA 120
Query 121 PEDAAESM----AMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSR 176
E A+ + F DL LD TREV RG+R+ISLTRTEFALL +L+ NPR+VL+R+
Sbjct 121 AESIAKKQPVETQLSFEDLKLDADTREVTRGERQISLTRTEFALLRLLMENPRKVLSRNT 180
Query 177 ILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRE 225
ILEEVWG+DFPTSGNALEVY+GYLR+KTE GEPRLIHTVRGVGYV+RE
Sbjct 181 ILEEVWGYDFPTSGNALEVYIGYLRKKTEESGEPRLIHTVRGVGYVMRE 229
>gi|257057242|ref|YP_003135074.1| response regulator with CheY-like receiver domain-containing
protein and winged-helix DNA-binding domain-containing protein
[Saccharomonospora viridis DSM 43017]
gi|256587114|gb|ACU98247.1| response regulator with CheY-like receiver domain protein and
winged-helix DNA-binding domain protein [Saccharomonospora
viridis DSM 43017]
Length=229
Score = 328 bits (840), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 181/229 (80%), Positives = 203/229 (89%), Gaps = 1/229 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL FNGY V+LA DG +AL+ +A+DRPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLQFNGYQVDLASDGAQALEKVATDRPDAMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EV R+LR GDDLPILVLTARD+VS+RVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVARRLRSVGDDLPILVLTARDAVSDRVAGLDAGADDYLPKPFALEELLARLRALLRRAG 120
Query 121 PEDAA-ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILE 179
E A+ ++ + F+DLTL+P TREV RG R ISLTRTEF+LLE+ + P+ VL RSRILE
Sbjct 121 QEGASGDTDVLTFADLTLNPNTREVTRGDRSISLTRTEFSLLELFMTYPKHVLARSRILE 180
Query 180 EVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EVWG+DFPTSGNALEVYVGYLRRKTEA GEPRLIHTVRGVGYVLRETPP
Sbjct 181 EVWGYDFPTSGNALEVYVGYLRRKTEAGGEPRLIHTVRGVGYVLRETPP 229
>gi|227487786|ref|ZP_03918102.1| response regulator [Corynebacterium glucuronolyticum ATCC 51867]
gi|227542427|ref|ZP_03972476.1| response regulator [Corynebacterium glucuronolyticum ATCC 51866]
gi|227092288|gb|EEI27600.1| response regulator [Corynebacterium glucuronolyticum ATCC 51867]
gi|227181625|gb|EEI62597.1| response regulator [Corynebacterium glucuronolyticum ATCC 51866]
Length=230
Score = 328 bits (840), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/230 (71%), Positives = 195/230 (85%), Gaps = 2/230 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILV DD++AVRESLRRSL+FNGY V LA DG +A+++I ++P ++LDVMMP++DGL
Sbjct 1 MKILVADDEQAVRESLRRSLTFNGYEVVLAEDGAQAVELIEKEQPTLVILDVMMPQMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR TGDD PIL+LTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+L RR+
Sbjct 61 EVCRTLRSTGDDRPILLLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLFRRSI 120
Query 121 PEDAA--ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRIL 178
E A + + F DL L+P TR+V RG + ISLTRTEFALLE L+ NPR+VL+RS IL
Sbjct 121 TESQAPEQPKELEFEDLVLNPDTRDVTRGGKPISLTRTEFALLEYLMRNPRKVLSRSDIL 180
Query 179 EEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
EEVWG++FPTSGNALEVY+GYLR+KTEA+GE RLIHTVRGVGYVLRET P
Sbjct 181 EEVWGYNFPTSGNALEVYIGYLRKKTEANGESRLIHTVRGVGYVLRETAP 230
>gi|145295044|ref|YP_001137865.1| hypothetical protein cgR_0988 [Corynebacterium glutamicum R]
gi|140844964|dbj|BAF53963.1| hypothetical protein [Corynebacterium glutamicum R]
Length=255
Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/232 (70%), Positives = 195/232 (85%), Gaps = 4/232 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDD++AVR+SLRRSLSFNGY+V LA DG++AL+MI ++P ++LDVMMPR+DGL
Sbjct 24 MKILVVDDEQAVRDSLRRSLSFNGYNVVLAEDGIQALEMIDKEQPALVILDVMMPRMDGL 83
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR GDD PIL+LTARD+VS+RV GLDAGADDYL KPFALEELLAR+R+L+RR+
Sbjct 84 EVCRHLRSEGDDRPILILTARDNVSDRVGGLDAGADDYLAKPFALEELLARVRSLVRRSA 143
Query 121 PEDAA----ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSR 176
E E + DLTLDP +R+V R R ISLTRTEFALL++L+ N R+VLTR++
Sbjct 144 VESNQSSNIEQALLSCGDLTLDPESRDVYRNGRAISLTRTEFALLQLLLKNQRKVLTRAQ 203
Query 177 ILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
ILEEVWG+DFPTSGNALEVY+GYLRRKTE +GE RLIHTVRGVGYVLRET P
Sbjct 204 ILEEVWGYDFPTSGNALEVYIGYLRRKTELEGEDRLIHTVRGVGYVLRETAP 255
>gi|344043616|gb|EGV39305.1| hypothetical protein CgS9114_13920 [Corynebacterium glutamicum
S9114]
Length=232
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/232 (70%), Positives = 195/232 (85%), Gaps = 4/232 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDD++AVR+SLRRSLSFNGY+V LA DG++AL+MI ++P ++LDVMMPR+DGL
Sbjct 1 MKILVVDDEQAVRDSLRRSLSFNGYNVVLAEDGIQALEMIDKEQPALVILDVMMPRMDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR LR GDD PIL+LTARD+VS+RV GLDAGADDYL KPFALEELLAR+R+L+RR+
Sbjct 61 EVCRHLRSEGDDRPILILTARDNVSDRVGGLDAGADDYLAKPFALEELLARVRSLVRRSA 120
Query 121 PEDAA----ESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSR 176
E E + DLTLDP +R+V R R ISLTRTEFALL++L+ N R+VLTR++
Sbjct 121 VESNQSSNIEQALLSCGDLTLDPESRDVYRNGRAISLTRTEFALLQLLLKNQRKVLTRAQ 180
Query 177 ILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
ILEEVWG+DFPTSGNALEVY+GYLRRKTE +GE RLIHTVRGVGYVLRET P
Sbjct 181 ILEEVWGYDFPTSGNALEVYIGYLRRKTELEGEDRLIHTVRGVGYVLRETAP 232
>gi|300781686|ref|ZP_07091540.1| response regulator [Corynebacterium genitalium ATCC 33030]
gi|300533393|gb|EFK54454.1| response regulator [Corynebacterium genitalium ATCC 33030]
Length=232
Score = 325 bits (834), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 164/232 (71%), Positives = 192/232 (83%), Gaps = 4/232 (1%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
++ILVVDD++AVRESLRRSL FNGY V LA DG EAL I ++PD VLDVMMP+LDGL
Sbjct 1 MKILVVDDEQAVRESLRRSLQFNGYDVALAKDGQEALASIEQEQPDLTVLDVMMPQLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
VCR+LR +G D PIL+LTARD VS+RVAGLDAGADDYLPKPFALEELLAR+R+LLRR +
Sbjct 61 GVCRELRSSGYDRPILMLTARDGVSDRVAGLDAGADDYLPKPFALEELLARVRSLLRRAR 120
Query 121 P----EDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSR 176
+DA + F DL LD +R+V RG R ISLTRTEF+LL +L+ NPR+VLTR +
Sbjct 121 ADAIQQDAEGGSELSFEDLHLDISSRDVRRGDRHISLTRTEFSLLHLLLRNPRKVLTRQK 180
Query 177 ILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
ILEEVWG +FP+SGNALEVY+GYLRRKTEADGEPRLIHTVRGVGYV+RE+ P
Sbjct 181 ILEEVWGHEFPSSGNALEVYIGYLRRKTEADGEPRLIHTVRGVGYVMRESAP 232
>gi|256374761|ref|YP_003098421.1| winged helix family two component transcriptional regulator [Actinosynnema
mirum DSM 43827]
gi|255919064|gb|ACU34575.1| two component transcriptional regulator, winged helix family
[Actinosynnema mirum DSM 43827]
Length=228
Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 180/228 (79%), Positives = 204/228 (90%), Gaps = 0/228 (0%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL FNGY V+LA DG +AL+ + S RPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLQFNGYQVDLAGDGQQALESVLSQRPDAMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR+LR TGDDLPILVLTARD+VS+RV+GLDAGADDYLPKPFALEELLAR+RALLRRT
Sbjct 61 EVCRRLRSTGDDLPILVLTARDAVSDRVSGLDAGADDYLPKPFALEELLARLRALLRRTA 120
Query 121 PEDAAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRSRILEE 180
+ +RF+DL LDP TR+V RG+R ISLTRTEFALLE+ +A+P++VLTR RILE+
Sbjct 121 TDVEEPVNLLRFADLELDPGTRDVRRGERPISLTRTEFALLELFLAHPKQVLTRGRILED 180
Query 181 VWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
VWG+DFPTSGNALEVYVGYLRRKTEA GEPRL+HTVRGVGYVLRETPP
Sbjct 181 VWGYDFPTSGNALEVYVGYLRRKTEAGGEPRLLHTVRGVGYVLRETPP 228
>gi|331694656|ref|YP_004330895.1| winged helix family two component transcriptional regulator [Pseudonocardia
dioxanivorans CB1190]
gi|326949345|gb|AEA23042.1| two component transcriptional regulator, winged helix family
[Pseudonocardia dioxanivorans CB1190]
Length=233
Score = 325 bits (832), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 179/233 (77%), Positives = 208/233 (90%), Gaps = 5/233 (2%)
Query 1 VRILVVDDDRAVRESLRRSLSFNGYSVELAHDGVEALDMIASDRPDALVLDVMMPRLDGL 60
+RILVVDDDRAVRESLRRSL+FNGY+VELA DG ALD + + RPDA+VLDVMMPRLDGL
Sbjct 1 MRILVVDDDRAVRESLRRSLAFNGYTVELAGDGQAALDALQASRPDAMVLDVMMPRLDGL 60
Query 61 EVCRQLRGTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLRRTK 120
EVCR++R GD+LPILVLTARD+VS+RVAGLDAGADDYLPKPFALEELLAR+RALLRR
Sbjct 61 EVCRRMRAAGDELPILVLTARDAVSDRVAGLDAGADDYLPKPFALEELLARLRALLRRRT 120
Query 121 PED-----AAESMAMRFSDLTLDPVTREVNRGQRRISLTRTEFALLEMLIANPRRVLTRS 175
P++ A S + F+DL+LDP TR+V RG R ISLTRTEF+LLE+L+A+PRRVLTR+
Sbjct 121 PDEIAAAAAGASKPLEFADLSLDPDTRDVRRGDRPISLTRTEFSLLELLLAHPRRVLTRA 180
Query 176 RILEEVWGFDFPTSGNALEVYVGYLRRKTEADGEPRLIHTVRGVGYVLRETPP 228
+ILE+VWG+DFPT+GNALEVY+GYLRRKTEA GEPRLIHTVRGVGYVLRE+PP
Sbjct 181 QILEQVWGYDFPTTGNALEVYIGYLRRKTEAGGEPRLIHTVRGVGYVLRESPP 233
Lambda K H
0.322 0.139 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 294240045594
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40