BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0983 Length=464 Score E Sequences producing significant alignments: (Bits) Value gi|308397856|ref|ZP_07669375.1| serine protease pepD [Mycobacter... 903 0.0 gi|15608123|ref|NP_215498.1| serine protease PepD [Mycobacterium... 902 0.0 gi|323720549|gb|EGB29630.1| serine protease pepD [Mycobacterium ... 900 0.0 gi|31792173|ref|NP_854666.1| serine protease [Mycobacterium bovi... 899 0.0 gi|344218810|gb|AEM99440.1| serine protease PepD [Mycobacterium ... 897 0.0 gi|289442403|ref|ZP_06432147.1| serine protease pepD [Mycobacter... 897 0.0 gi|289749510|ref|ZP_06508888.1| serine protease pepD [Mycobacter... 894 0.0 gi|254231281|ref|ZP_04924608.1| serine protease pepD [Mycobacter... 887 0.0 gi|308231689|ref|ZP_07663909.1| serine protease pepD [Mycobacter... 882 0.0 gi|15840408|ref|NP_335445.1| heat shock protein HtrA, putative [... 863 0.0 gi|254363901|ref|ZP_04979947.1| serine protease pepD [Mycobacter... 798 0.0 gi|167968050|ref|ZP_02550327.1| serine protease PepD [Mycobacter... 689 0.0 gi|297633508|ref|ZP_06951288.1| serine protease pepD [Mycobacter... 686 0.0 gi|183984497|ref|YP_001852788.1| serine protease PepD [Mycobacte... 654 0.0 gi|118619770|ref|YP_908102.1| serine protease PepD [Mycobacteriu... 648 0.0 gi|60594175|pdb|1Y8T|A Chain A, Crystal Structure Of Rv0983 From... 600 1e-169 gi|296169793|ref|ZP_06851408.1| protease [Mycobacterium parascro... 597 1e-168 gi|240169346|ref|ZP_04748005.1| heat shock protein HtrA, putativ... 592 6e-167 gi|41407016|ref|NP_959852.1| hypothetical protein MAP0918 [Mycob... 580 1e-163 gi|4455705|emb|CAB36690.1| putative serine protease [Mycobacteri... 580 2e-163 gi|118462567|ref|YP_880349.1| protease [Mycobacterium avium 104]... 579 3e-163 gi|254773976|ref|ZP_05215492.1| hypothetical protein MaviaA2_047... 533 3e-149 gi|126437244|ref|YP_001072935.1| peptidase S1 and S6, chymotryps... 523 2e-146 gi|15826989|ref|NP_301252.1| serine protease [Mycobacterium lepr... 522 4e-146 gi|108801263|ref|YP_641460.1| peptidase S1 and S6, chymotrypsin/... 521 1e-145 gi|254549968|ref|ZP_05140415.1| serine protease pepD [Mycobacter... 516 3e-144 gi|254823445|ref|ZP_05228446.1| hypothetical protein MintA_26181... 503 4e-140 gi|342860581|ref|ZP_08717232.1| hypothetical protein MCOL_16941 ... 496 3e-138 gi|118471908|ref|YP_889724.1| peptidase S1 and S6, chymotrypsin/... 489 3e-136 gi|333989574|ref|YP_004522188.1| serine protease PepD [Mycobacte... 468 1e-129 gi|145222479|ref|YP_001133157.1| peptidase S1 and S6, chymotryps... 464 1e-128 gi|315442924|ref|YP_004075803.1| trypsin-like serine protease wi... 456 3e-126 gi|120405792|ref|YP_955621.1| peptidase S1 and S6, chymotrypsin/... 434 1e-119 gi|169628173|ref|YP_001701822.1| putative serine protease [Mycob... 429 4e-118 gi|169631386|ref|YP_001705035.1| putative serine protease [Mycob... 376 5e-102 gi|325676319|ref|ZP_08155998.1| serine protease C-terminal domai... 368 1e-99 gi|312138614|ref|YP_004005950.1| serine peptidase [Rhodococcus e... 368 1e-99 gi|111022590|ref|YP_705562.1| serine protease, C-terminal [Rhodo... 359 6e-97 gi|226365096|ref|YP_002782879.1| S1C family peptidase [Rhodococc... 353 4e-95 gi|229495059|ref|ZP_04388805.1| protease [Rhodococcus erythropol... 332 9e-89 gi|333921223|ref|YP_004494804.1| S1C family peptidase [Amycolici... 330 2e-88 gi|226307883|ref|YP_002767843.1| S1 family peptidase [Rhodococcu... 330 2e-88 gi|326383753|ref|ZP_08205438.1| peptidase S1 and S6 chymotrypsin... 324 3e-86 gi|262201366|ref|YP_003272574.1| peptidase S1 and S6 chymotrypsi... 318 9e-85 gi|343925200|ref|ZP_08764727.1| putative S1 family peptidase [Go... 312 7e-83 gi|54026936|ref|YP_121178.1| putative protease [Nocardia farcini... 309 6e-82 gi|256374769|ref|YP_003098429.1| peptidase S1 and S6 chymotrypsi... 308 2e-81 gi|319950657|ref|ZP_08024560.1| serine peptidase [Dietzia cinnam... 306 5e-81 gi|296140965|ref|YP_003648208.1| peptidase S1 and S6 chymotrypsi... 304 3e-80 gi|213966077|ref|ZP_03394265.1| protease do [Corynebacterium amy... 303 4e-80 >gi|308397856|ref|ZP_07669375.1| serine protease pepD [Mycobacterium tuberculosis SUMu012] gi|308366787|gb|EFP55638.1| serine protease pepD [Mycobacterium tuberculosis SUMu012] Length=510 Score = 903 bits (2334), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/464 (100%), Positives = 464/464 (100%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 47 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 106 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 107 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 166 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 167 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 226 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 227 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 286 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 287 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 346 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 347 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 406 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 407 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 466 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 467 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 510 >gi|15608123|ref|NP_215498.1| serine protease PepD [Mycobacterium tuberculosis H37Rv] gi|148660764|ref|YP_001282287.1| serine protease PepD [Mycobacterium tuberculosis H37Ra] gi|2916944|emb|CAA17582.1| PROBABLE SERINE PROTEASE PEPD (SERINE PROTEINASE) (MTB32B) [Mycobacterium tuberculosis H37Rv] gi|148504916|gb|ABQ72725.1| serine protease PepD [Mycobacterium tuberculosis H37Ra] Length=464 Score = 902 bits (2332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/464 (100%), Positives = 464/464 (100%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|323720549|gb|EGB29630.1| serine protease pepD [Mycobacterium tuberculosis CDC1551A] Length=510 Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/464 (99%), Positives = 463/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 47 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 106 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 107 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 166 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 167 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 226 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 227 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 286 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 287 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 346 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 347 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 406 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 407 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 466 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 467 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 510 >gi|31792173|ref|NP_854666.1| serine protease [Mycobacterium bovis AF2122/97] gi|121636910|ref|YP_977133.1| putative serine protease [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148822192|ref|YP_001286946.1| serine protease pepD [Mycobacterium tuberculosis F11] 32 more sequence titles Length=464 Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/464 (99%), Positives = 463/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|344218810|gb|AEM99440.1| serine protease PepD [Mycobacterium tuberculosis CTRI-2] Length=464 Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/464 (99%), Positives = 463/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLG+PPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGTPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|289442403|ref|ZP_06432147.1| serine protease pepD [Mycobacterium tuberculosis T46] gi|289415322|gb|EFD12562.1| serine protease pepD [Mycobacterium tuberculosis T46] Length=464 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/464 (99%), Positives = 462/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSK PGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKTPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|289749510|ref|ZP_06508888.1| serine protease pepD [Mycobacterium tuberculosis T92] gi|289690097|gb|EFD57526.1| serine protease pepD [Mycobacterium tuberculosis T92] Length=464 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 461/464 (99%), Positives = 462/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIA+VSAGIGGA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIALVSAGIGGAP 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|254231281|ref|ZP_04924608.1| serine protease pepD [Mycobacterium tuberculosis C] gi|124600340|gb|EAY59350.1| serine protease pepD [Mycobacterium tuberculosis C] Length=464 Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust. Identities = 457/464 (99%), Positives = 459/464 (99%), Gaps = 0/464 (0%) Query 1 MAKLARVVGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 M+KL RVVG+VQEE SDMT HPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ Sbjct 1 MSKLPRVVGIVQEEHTSDMTTHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQ 60 Query 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA Sbjct 61 PTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAA 120 Query 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE Sbjct 121 ASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEE 180 Query 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV Sbjct 181 GSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVV 240 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN Sbjct 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ Sbjct 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDR Sbjct 361 AKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 >gi|308231689|ref|ZP_07663909.1| serine protease pepD [Mycobacterium tuberculosis SUMu001] gi|308371820|ref|ZP_07667250.1| serine protease pepD [Mycobacterium tuberculosis SUMu004] gi|308216325|gb|EFO75724.1| serine protease pepD [Mycobacterium tuberculosis SUMu001] gi|308335326|gb|EFP24177.1| serine protease pepD [Mycobacterium tuberculosis SUMu004] Length=457 Score = 882 bits (2280), Expect = 0.0, Method: Compositional matrix adjust. Identities = 455/457 (99%), Positives = 456/457 (99%), Gaps = 0/457 (0%) Query 8 VGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP 67 +GLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP Sbjct 1 MGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP 60 Query 68 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN 127 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN Sbjct 61 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN 120 Query 128 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS 187 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS Sbjct 121 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS 180 Query 188 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG 247 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG Sbjct 181 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG 240 Query 248 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ 307 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ Sbjct 241 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ 300 Query 308 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE 367 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE Sbjct 301 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE 360 Query 368 LISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA 427 LISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA Sbjct 361 LISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADA 420 Query 428 LVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 LVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 LVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 457 >gi|15840408|ref|NP_335445.1| heat shock protein HtrA, putative [Mycobacterium tuberculosis CDC1551] gi|308370107|ref|ZP_07666867.1| serine protease pepD [Mycobacterium tuberculosis SUMu002] gi|308370561|ref|ZP_07666964.1| serine protease pepD [Mycobacterium tuberculosis SUMu003] 17 more sequence titles Length=446 Score = 863 bits (2229), Expect = 0.0, Method: Compositional matrix adjust. Identities = 445/446 (99%), Positives = 445/446 (99%), Gaps = 0/446 (0%) Query 19 MTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEALGGTRPGL 78 MTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEALGGTRPGL Sbjct 1 MTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEALGGTRPGL 60 Query 79 IPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPV 138 IPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPV Sbjct 61 IPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPV 120 Query 139 AASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHV 198 AASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHV Sbjct 121 AASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHV 180 Query 199 IAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSD 258 IAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSD Sbjct 181 IAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSD 240 Query 259 LRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSG 318 LRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSG Sbjct 241 LRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSG 300 Query 319 GALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHAS 378 GALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHAS Sbjct 301 GALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHAS 360 Query 379 LGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPG 438 LGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPG Sbjct 361 LGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPG 420 Query 439 ATVALTFQDPSGGSRTVQVTLGKAEQ 464 ATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 421 ATVALTFQDPSGGSRTVQVTLGKAEQ 446 >gi|254363901|ref|ZP_04979947.1| serine protease pepD [Mycobacterium tuberculosis str. Haarlem] gi|134149415|gb|EBA41460.1| serine protease pepD [Mycobacterium tuberculosis str. Haarlem] Length=444 Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust. Identities = 411/414 (99%), Positives = 412/414 (99%), Gaps = 0/414 (0%) Query 8 VGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP 67 +GLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP Sbjct 1 MGLVQEEQPSDMTNHPRYSPPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQP 60 Query 68 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN 127 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN Sbjct 61 YEALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFN 120 Query 128 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS 187 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS Sbjct 121 RAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILS 180 Query 188 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG 247 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG Sbjct 181 AEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG 240 Query 248 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ 307 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ Sbjct 241 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ 300 Query 308 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE 367 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE Sbjct 301 TDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADE 360 Query 368 LISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRP 421 LISTGKASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDD P Sbjct 361 LISTGKASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDPP 414 >gi|167968050|ref|ZP_02550327.1| serine protease PepD [Mycobacterium tuberculosis H37Ra] Length=364 Score = 689 bits (1779), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/364 (100%), Positives = 364/364 (100%), Gaps = 0/364 (0%) Query 101 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA 160 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA Sbjct 1 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA 60 Query 161 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD 220 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD Sbjct 61 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD 120 Query 221 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT 280 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT Sbjct 121 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT 180 Query 281 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA 340 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA Sbjct 181 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA 240 Query 341 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAG 400 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAG Sbjct 241 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAG 300 Query 401 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG 460 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG Sbjct 301 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG 360 Query 461 KAEQ 464 KAEQ Sbjct 361 KAEQ 364 >gi|297633508|ref|ZP_06951288.1| serine protease pepD [Mycobacterium tuberculosis KZN 4207] gi|297730493|ref|ZP_06959611.1| serine protease pepD [Mycobacterium tuberculosis KZN R506] gi|313657822|ref|ZP_07814702.1| serine protease pepD [Mycobacterium tuberculosis KZN V2475] gi|339293986|gb|AEJ46097.1| serine protease pepD [Mycobacterium tuberculosis CCDC5079] gi|339297626|gb|AEJ49736.1| serine protease pepD [Mycobacterium tuberculosis CCDC5180] Length=364 Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust. Identities = 363/364 (99%), Positives = 363/364 (99%), Gaps = 0/364 (0%) Query 101 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA 160 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA Sbjct 1 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA 60 Query 161 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD 220 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD Sbjct 61 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD 120 Query 221 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT 280 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT Sbjct 121 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT 180 Query 281 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA 340 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA Sbjct 181 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA 240 Query 341 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAG 400 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDT GAKIVEVVAG Sbjct 241 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTPGAKIVEVVAG 300 Query 401 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG 460 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG Sbjct 301 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG 360 Query 461 KAEQ 464 KAEQ Sbjct 361 KAEQ 364 >gi|183984497|ref|YP_001852788.1| serine protease PepD [Mycobacterium marinum M] gi|183177823|gb|ACC42933.1| serine protease PepD [Mycobacterium marinum M] Length=479 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 368/483 (77%), Positives = 396/483 (82%), Gaps = 41/483 (8%) Query 19 MTNHPRYSPPPQQPGT---------PGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYE 69 MTNHPRYSPPPQQPG P YAQG QQ Y+ QFDWRY S P Q R PYE Sbjct 1 MTNHPRYSPPPQQPGYRTAPNQPVPPAYAQGPQQNYNPQFDWRYHQSRP----QPRPPYE 56 Query 70 ALGGTRPGLIP---------------------------GVIPTMTPPPGMVRQR-PRAGM 101 + GT PGL+P G++P M PPP ++R+R PRAGM Sbjct 57 GVSGTGPGLLPPATGPGPIPPDTGPGPIPGGTGPGPIPGMLPPMAPPPNVIRERRPRAGM 116 Query 102 LAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAA 161 L +GAV IAVVSAGIGGAAAS++ NR+PA SG + AS APS+PAANMPPGSVEQVAA Sbjct 117 LVMGAVVIAVVSAGIGGAAASIIELNRSPATSSGREMVASGAPSVPAANMPPGSVEQVAA 176 Query 162 KVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG 221 KV+PSVVMLETD+GRQSEEGSGIILSA+GL++TNNHV+AAAAKPP G+P PKTTVT DG Sbjct 177 KVLPSVVMLETDVGRQSEEGSGIILSADGLVMTNNHVVAAAAKPPAGAPEPKTTVTLYDG 236 Query 222 RTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTG 281 RTA FTVVGADPTSDIAVVRV GVSGLTPI+LGSS+DLRVGQPVLAIGSPLGL GTVTTG Sbjct 237 RTASFTVVGADPTSDIAVVRVSGVSGLTPIALGSSADLRVGQPVLAIGSPLGLAGTVTTG 296 Query 282 IVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGAD 341 IVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVG+NSAIATLGAD Sbjct 297 IVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGINSAIATLGAD 356 Query 342 SADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGG 401 S DAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVT DK GAK+VEVV GG Sbjct 357 SGDAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTTDKGVPGAKVVEVVQGG 416 Query 402 AAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGK 461 AAA AG+PKGVVVTKVDDR I SADALVAAVRSKAPG V+LTFQDP G +RTVQVTLGK Sbjct 417 AAATAGLPKGVVVTKVDDRAITSADALVAAVRSKAPGDKVSLTFQDPDGSTRTVQVTLGK 476 Query 462 AEQ 464 AEQ Sbjct 477 AEQ 479 >gi|118619770|ref|YP_908102.1| serine protease PepD [Mycobacterium ulcerans Agy99] gi|118571880|gb|ABL06631.1| serine protease PepD [Mycobacterium ulcerans Agy99] Length=479 Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust. Identities = 365/483 (76%), Positives = 395/483 (82%), Gaps = 41/483 (8%) Query 19 MTNHPRYSPPPQQPGT---------PGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYE 69 MTNHP YSPPPQQPG P YAQG QQ Y+ QFDWRY S P Q R PYE Sbjct 1 MTNHPGYSPPPQQPGYRTAPNQPVPPAYAQGPQQNYNPQFDWRYHQSRP----QPRPPYE 56 Query 70 ALGGTRPGLIP---------------------------GVIPTMTPPPGMVRQR-PRAGM 101 + GT PGL+P G++P M PPP ++R+R PRAGM Sbjct 57 GVSGTGPGLLPPATGPGPIPPDTGPGPIPGGTGPGPIPGMLPPMAPPPNVIRERRPRAGM 116 Query 102 LAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAA 161 L +GAV IAVVSAGIGGAAAS++ NR+PA SG + AS APS+PAANMPPGSVEQVAA Sbjct 117 LVMGAVVIAVVSAGIGGAAASIIELNRSPATSSGREMVASGAPSVPAANMPPGSVEQVAA 176 Query 162 KVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDG 221 KV+PSVVMLETD+GRQSEEGSGIILSA+GL++TNNHV+AAAAKPP G+P PKTTVT DG Sbjct 177 KVLPSVVMLETDVGRQSEEGSGIILSADGLVMTNNHVVAAAAKPPAGAPEPKTTVTLYDG 236 Query 222 RTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTG 281 RTA FTVVGADPTSDIAVVRV GVSGLTPI+LGSS+DLRVGQP+LAIGSPLGL GTVTTG Sbjct 237 RTASFTVVGADPTSDIAVVRVSGVSGLTPIALGSSADLRVGQPLLAIGSPLGLAGTVTTG 296 Query 282 IVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGAD 341 IVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVG+NSAIATLGAD Sbjct 297 IVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGINSAIATLGAD 356 Query 342 SADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGG 401 S DAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVT DK GAK+VEVV GG Sbjct 357 SGDAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTTDKGVPGAKVVEVVQGG 416 Query 402 AAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGK 461 AAA AG+PKGVVVTKVDDR I SADALVAAVRSKAPG V+LTFQDP G +RTVQVTLGK Sbjct 417 AAATAGLPKGVVVTKVDDRAITSADALVAAVRSKAPGDKVSLTFQDPDGSTRTVQVTLGK 476 Query 462 AEQ 464 AEQ Sbjct 477 AEQ 479 >gi|60594175|pdb|1Y8T|A Chain A, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form gi|60594176|pdb|1Y8T|B Chain B, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form gi|60594177|pdb|1Y8T|C Chain C, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form gi|190016250|pdb|2Z9I|A Chain A, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form gi|190016251|pdb|2Z9I|B Chain B, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form gi|190016252|pdb|2Z9I|C Chain C, Crystal Structure Of Rv0983 From Mycobacterium Tuberculosis- Proteolytically Active Form Length=324 Score = 600 bits (1548), Expect = 1e-169, Method: Compositional matrix adjust. Identities = 314/316 (99%), Positives = 314/316 (99%), Gaps = 0/316 (0%) Query 149 ANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLG 208 ANMPPGSVEQVAAKVVPSVV LETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLG Sbjct 1 ANMPPGSVEQVAAKVVPSVVXLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLG 60 Query 209 SPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAI 268 SPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAI Sbjct 61 SPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAI 120 Query 269 GSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQL 328 GSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVN NAQL Sbjct 121 GSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNXNAQL 180 Query 329 VGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKD 388 VGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKD Sbjct 181 VGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKD 240 Query 389 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDP 448 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDP Sbjct 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDP 300 Query 449 SGGSRTVQVTLGKAEQ 464 SGGSRTVQVTLGKAEQ Sbjct 301 SGGSRTVQVTLGKAEQ 316 >gi|296169793|ref|ZP_06851408.1| protease [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895587|gb|EFG75286.1| protease [Mycobacterium parascrofulaceum ATCC BAA-614] Length=477 Score = 597 bits (1540), Expect = 1e-168, Method: Compositional matrix adjust. Identities = 340/473 (72%), Positives = 368/473 (78%), Gaps = 41/473 (8%) Query 29 PQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEALGGTRPGLIPGVIPTMTP 88 P GT Y QG QQ Y Q FDWR+ Q TQ+RQPY+ GT PG IPG Sbjct 9 PSHAGTSAYGQGHQQPYGQAFDWRHQS----QTTQFRQPYDPFSGTGPGRIPGGTGAGPI 64 Query 89 PPG-----------------MVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPA 131 P G ++R RAG+L + A+ IAVVSAGIGGAAA+ V Sbjct 65 PGGGSGTGPIPGMLPPMPPPGPQKRSRAGLLTVSALAIAVVSAGIGGAAATAVELGTHTT 124 Query 132 GPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGL 191 +G V +APS+PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGI+LSA+GL Sbjct 125 NANGHSVIGGSAPSVPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIVLSADGL 184 Query 192 ILTNNHVIAAAAKPPLGSPPP--------------------KTTVTFSDGRTAPFTVVGA 231 ILTNNHV+AAAA PP + P KTTVTF+DGRTAPFTVVG Sbjct 185 ILTNNHVVAAAAGPPKATGAPGAPPGGPPGGPGGGLGGPAPKTTVTFADGRTAPFTVVGT 244 Query 232 DPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVS 291 DPTSDIAV+RVQGVSGLTPISLGSSSDLRVGQPV+AIGSPLGL GTVTTGIVSALNRPVS Sbjct 245 DPTSDIAVIRVQGVSGLTPISLGSSSDLRVGQPVVAIGSPLGLSGTVTTGIVSALNRPVS 304 Query 292 TTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIG 351 TTGE+GNQNTVLDAIQTDAAINPGNSGGALVNMN QLVGVNSAIATLGADS DAQSGSIG Sbjct 305 TTGESGNQNTVLDAIQTDAAINPGNSGGALVNMNGQLVGVNSAIATLGADSPDAQSGSIG 364 Query 352 LGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKG 411 LGFAIPVDQAKRIADELISTGKASHASLGVQVTNDK + GAKIV+VV GGAA+ AGVPK Sbjct 365 LGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKGSPGAKIVDVVPGGAASTAGVPKN 424 Query 412 VVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 V+VTKVDDRPINSADALVAAVRSKAPG ++LTFQDP+GGSRTV VTLGKA+Q Sbjct 425 VIVTKVDDRPINSADALVAAVRSKAPGDKISLTFQDPAGGSRTVPVTLGKADQ 477 >gi|240169346|ref|ZP_04748005.1| heat shock protein HtrA, putative [Mycobacterium kansasii ATCC 12478] Length=364 Score = 592 bits (1525), Expect = 6e-167, Method: Compositional matrix adjust. Identities = 325/364 (90%), Positives = 341/364 (94%), Gaps = 0/364 (0%) Query 101 MLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVA 160 MLAIGA+TIAVVSAGIGGAAAS+V R+PA +GG V AS APSIPAANMP GSVEQVA Sbjct 1 MLAIGALTIAVVSAGIGGAAASVVELTRSPASSNGGGVVASGAPSIPAANMPAGSVEQVA 60 Query 161 AKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSD 220 AKVVPSVVMLETDLGR SEEGSG+ILS++GLILTNNHV+AAAAKPP G+PPPKTTVTFSD Sbjct 61 AKVVPSVVMLETDLGRASEEGSGVILSSDGLILTNNHVVAAAAKPPAGAPPPKTTVTFSD 120 Query 221 GRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTT 280 GRTAPFTVVGADPTSDIAV++VQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGL GTVTT Sbjct 121 GRTAPFTVVGADPTSDIAVIKVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLAGTVTT 180 Query 281 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGA 340 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMN QLVG+NSAIATLGA Sbjct 181 GIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNGQLVGINSAIATLGA 240 Query 341 DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAG 400 DS DAQSGSIGLGFAIPVDQAKRIADELISTGKA+HASLGVQVT DK GAK+VEVV G Sbjct 241 DSGDAQSGSIGLGFAIPVDQAKRIADELISTGKATHASLGVQVTTDKGIPGAKVVEVVQG 300 Query 401 GAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLG 460 GAAA AGVPKGV+VTKVD+RPINSADALVAAVRSKAPG V LTFQDPSGGSRTVQVTLG Sbjct 301 GAAATAGVPKGVIVTKVDERPINSADALVAAVRSKAPGDKVVLTFQDPSGGSRTVQVTLG 360 Query 461 KAEQ 464 KAEQ Sbjct 361 KAEQ 364 >gi|41407016|ref|NP_959852.1| hypothetical protein MAP0918 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395367|gb|AAS03235.1| hypothetical protein MAP_0918 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461408|gb|EGO40279.1| trypsin-like serine protease with C-terminal PDZ domain-containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=488 Score = 580 bits (1496), Expect = 1e-163, Method: Compositional matrix adjust. Identities = 357/492 (73%), Positives = 384/492 (79%), Gaps = 50/492 (10%) Query 19 MTNHPRYS-----------------PPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQP 61 MTN PRYS P P G+ GYAQ QQ Y QQFDWRY S P Q Sbjct 1 MTNDPRYSPPPQQQPGYPPAPNQTAPVPSHAGSSGYAQ-GQQPYQQQFDWRYR-SQPSQT 58 Query 62 TQYRQPYEALGGTRPGLIPG---------VIPTMTPPPGMVRQRPRAGMLAIGAVTIAVV 112 TQ+R PYE G PG +PG + P M PP ++R RAG+L +GAV IAVV Sbjct 59 TQFRSPYEPFGNAGPGRVPGGTGTGPLPGMHPGMPAPP-EPQKRSRAGLLTVGAVAIAVV 117 Query 113 SAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLET 172 SAGIGGAAA+ V G GG +A AAPS+PAANMPPGSVEQVAAKVVPSVVMLET Sbjct 118 SAGIGGAAATAVEMGTHATGSGGGRIAG-AAPSVPAANMPPGSVEQVAAKVVPSVVMLET 176 Query 173 DLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPP-------------------PK 213 DLGRQSEEGSGIILS +GLILTNNHV+AAAA PP G PK Sbjct 177 DLGRQSEEGSGIILSTDGLILTNNHVVAAAAGPPKGPAAPPVVPLPPGGPGGGPGAGTPK 236 Query 214 TTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLG 273 TTVTFSDGRTAPFTVVGADPTSDIAV+RVQG+SGLTPISLGSSSDLRVGQPV+AIGSPLG Sbjct 237 TTVTFSDGRTAPFTVVGADPTSDIAVIRVQGMSGLTPISLGSSSDLRVGQPVVAIGSPLG 296 Query 274 LEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNS 333 L GTVTTGIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGALVNMN QLVGVNS Sbjct 297 LSGTVTTGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALVNMNGQLVGVNS 356 Query 334 AIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAK 393 AIATLGADS DAQSGSIGLGFAIPVDQAKRIADELI+TGKASHASLGVQVTNDK T GAK Sbjct 357 AIATLGADSPDAQSGSIGLGFAIPVDQAKRIADELIATGKASHASLGVQVTNDKGTPGAK 416 Query 394 IVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPS-GGS 452 +V+VV+GGAAA+AG+PK VVVTKVDDRPINSADALVAAVRSKAPG + LTF DP+ GGS Sbjct 417 VVDVVSGGAAASAGLPKNVVVTKVDDRPINSADALVAAVRSKAPGDKITLTFSDPAGGGS 476 Query 453 RTVQVTLGKAEQ 464 RT+ VTLGKA+Q Sbjct 477 RTLPVTLGKADQ 488 >gi|4455705|emb|CAB36690.1| putative serine protease [Mycobacterium leprae] Length=452 Score = 580 bits (1495), Expect = 2e-163, Method: Compositional matrix adjust. Identities = 343/459 (75%), Positives = 377/459 (83%), Gaps = 20/459 (4%) Query 19 MTNHPRYSPPPQQPG---------TPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYE 69 MTNHPRYSPPPQQPG + Y + QQ + QQ DW Y SP Q QY +PYE Sbjct 1 MTNHPRYSPPPQQPGYRSAPNQPVSSSYTEEQQPYHQQQVDWCYQQSPSLQ--QYHRPYE 58 Query 70 ALGGTRPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRA 129 GG G +P + +M PP + +RPRAGMLA+ A+ IAVVSAGIGG AA++V Sbjct 59 PFGGA--GTVP--LQSMIPPGRVADRRPRAGMLAVSALAIAVVSAGIGGVAATVVALGTR 114 Query 130 PAGPSG-GPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSA 188 AG +G GPV AA S+PAANMP GSVEQVA KVVPSVVMLETDLGRQSEEGSG+ILSA Sbjct 115 VAGGNGAGPVTGPAA-SVPAANMPSGSVEQVAVKVVPSVVMLETDLGRQSEEGSGVILSA 173 Query 189 EGLILTNNHVIAAAAKPPLGSP---PPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGV 245 +GLILTNNHV+A AAKP G PKTTVTF DGRTA FTVVGADPTSDIAVVRVQ + Sbjct 174 DGLILTNNHVVAVAAKPGGGPGGGLSPKTTVTFFDGRTASFTVVGADPTSDIAVVRVQSI 233 Query 246 SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDA 305 SGLTPI++GSS+DLRVGQPV+A+GSPLGL GTVT+GIVSALNRPVSTTGE+GNQNTVLDA Sbjct 234 SGLTPITMGSSADLRVGQPVVAVGSPLGLAGTVTSGIVSALNRPVSTTGESGNQNTVLDA 293 Query 306 IQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIA 365 IQTDAAINPGNSGGALVNM QLVGVNSAIATLGADS DAQSGSIGLGFAIPVDQAKRIA Sbjct 294 IQTDAAINPGNSGGALVNMGGQLVGVNSAIATLGADSGDAQSGSIGLGFAIPVDQAKRIA 353 Query 366 DELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSA 425 DELISTGKA+HASLGVQV DK T GAK+++VVAGGAAANA VPKGVV+TKVDDR I+SA Sbjct 354 DELISTGKATHASLGVQVATDKGTPGAKVMDVVAGGAAANAAVPKGVVLTKVDDRLISSA 413 Query 426 DALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 DALVAAVRSKAPG V+LT+QD SG SRTVQVTLGKAEQ Sbjct 414 DALVAAVRSKAPGDKVSLTYQDQSGSSRTVQVTLGKAEQ 452 >gi|118462567|ref|YP_880349.1| protease [Mycobacterium avium 104] gi|118163854|gb|ABK64751.1| protease [Mycobacterium avium 104] Length=488 Score = 579 bits (1493), Expect = 3e-163, Method: Compositional matrix adjust. Identities = 357/492 (73%), Positives = 384/492 (79%), Gaps = 50/492 (10%) Query 19 MTNHPRYS-----------------PPPQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQP 61 MTN PRYS P P G+ GYAQ QQ Y QQFDWRY S P Q Sbjct 1 MTNDPRYSPPPQQQPGYPPAPNQTAPVPSHAGSSGYAQ-GQQPYQQQFDWRYR-SQPSQT 58 Query 62 TQYRQPYEALGGTRPGLIPG---------VIPTMTPPPGMVRQRPRAGMLAIGAVTIAVV 112 TQ+R PYE G PG +PG + P M PP ++R RAG+L +GAV IAVV Sbjct 59 TQFRSPYEPFGNAGPGRVPGGTGTGPLPGMHPGMPGPP-EPQKRSRAGLLTVGAVAIAVV 117 Query 113 SAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLET 172 SAGIGGAAA+ V G GG +A AAPS+PAANMPPGSVEQVAAKVVPSVVMLET Sbjct 118 SAGIGGAAATAVEMGTHATGSGGGRIAG-AAPSVPAANMPPGSVEQVAAKVVPSVVMLET 176 Query 173 DLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPP-------------------PK 213 DLGRQSEEGSGIILS +GLILTNNHV+AAAA PP G PK Sbjct 177 DLGRQSEEGSGIILSTDGLILTNNHVVAAAAGPPKGPAAPPVVPLPPGGPGGGPGAGTPK 236 Query 214 TTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLG 273 TTVTFSDGRTAPFTVVGADPTSDIAV+RVQG+SGLTPISLGSSSDLRVGQPV+AIGSPLG Sbjct 237 TTVTFSDGRTAPFTVVGADPTSDIAVIRVQGMSGLTPISLGSSSDLRVGQPVVAIGSPLG 296 Query 274 LEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNS 333 L GTVTTGIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGALVNMN QLVGVNS Sbjct 297 LSGTVTTGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALVNMNGQLVGVNS 356 Query 334 AIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAK 393 AIATLGADS DAQSGSIGLGFAIPVDQAKRIADELI+TGKASHASLGVQVTNDK T GAK Sbjct 357 AIATLGADSPDAQSGSIGLGFAIPVDQAKRIADELIATGKASHASLGVQVTNDKGTPGAK 416 Query 394 IVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPS-GGS 452 +V+VV+GGAAA+AG+PK VVVTKVDDRPINSADALVAAVRSKAPG + LTF DP+ GGS Sbjct 417 VVDVVSGGAAASAGLPKNVVVTKVDDRPINSADALVAAVRSKAPGDKITLTFSDPAGGGS 476 Query 453 RTVQVTLGKAEQ 464 RT+ VTLGKA+Q Sbjct 477 RTLPVTLGKADQ 488 >gi|254773976|ref|ZP_05215492.1| hypothetical protein MaviaA2_04779 [Mycobacterium avium subsp. avium ATCC 25291] Length=382 Score = 533 bits (1373), Expect = 3e-149, Method: Compositional matrix adjust. Identities = 309/383 (81%), Positives = 331/383 (87%), Gaps = 21/383 (5%) Query 102 LAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAA 161 + +GAV IAVVSAGIGGAAA+ V G GG +A AAPS+PAANMPPGSVEQVAA Sbjct 1 MTVGAVAIAVVSAGIGGAAATAVEMGTHATGSGGGRIAG-AAPSVPAANMPPGSVEQVAA 59 Query 162 KVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSP----------- 210 KVVPSVVMLETDLGRQSEEGSGIILS +GLILTNNHV+AAAA PP G Sbjct 60 KVVPSVVMLETDLGRQSEEGSGIILSTDGLILTNNHVVAAAAGPPKGPAAPPVVPLPPGG 119 Query 211 --------PPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVG 262 PKTTVTFSDGRTAPFTVVGADPTSDIAV+RVQG+SGLTPISLGSSSDLRVG Sbjct 120 PGGGPGAGTPKTTVTFSDGRTAPFTVVGADPTSDIAVIRVQGMSGLTPISLGSSSDLRVG 179 Query 263 QPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALV 322 QPV+AIGSPLGL GTVTTGIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGALV Sbjct 180 QPVVAIGSPLGLSGTVTTGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALV 239 Query 323 NMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQ 382 NMN QLVGVNSAIATLGADS DAQSGSIGLGFAIPVDQAKRIADELI+TGKASHASLGVQ Sbjct 240 NMNGQLVGVNSAIATLGADSPDAQSGSIGLGFAIPVDQAKRIADELIATGKASHASLGVQ 299 Query 383 VTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVA 442 VTNDK T GAK+V+VV+GGAAA+AG+PK VVVTKVDDRPINSA+ALVAAVRSKAPG + Sbjct 300 VTNDKGTPGAKVVDVVSGGAAASAGLPKNVVVTKVDDRPINSANALVAAVRSKAPGDKIT 359 Query 443 LTFQDPS-GGSRTVQVTLGKAEQ 464 LTF DP+ GGSRT+ VTLGKA+Q Sbjct 360 LTFSDPAGGGSRTLPVTLGKADQ 382 >gi|126437244|ref|YP_001072935.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] gi|126237044|gb|ABO00445.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. JLS] Length=440 Score = 523 bits (1348), Expect = 2e-146, Method: Compositional matrix adjust. Identities = 308/454 (68%), Positives = 344/454 (76%), Gaps = 22/454 (4%) Query 19 MTNHPRYSPPPQQ-PG------TPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEAL 71 MTNHPRYSPPPQQ PG GY + Q +DWRY P Q+R PY+ Sbjct 1 MTNHPRYSPPPQQQPGHRPVGPDTGYQGADPYSQQQPYDWRYAAQPQ---QQFRAPYDPY 57 Query 72 GGTRPGLIPGVIPT-MTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAP 130 G PT + P P ++R RAG L +GA+ +AVVSAGIGG A++V +R Sbjct 58 RG-------AAQPTAVMPQPRPTQKRSRAGALTVGALAVAVVSAGIGGGVATMVQQDR-- 108 Query 131 AGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEG 190 PS G AAPS+PAA +P GSVEQVAAKVVPSVV LET+LGR SEEGSGIIL+++G Sbjct 109 --PSFGSSITGAAPSVPAAALPAGSVEQVAAKVVPSVVKLETNLGRASEEGSGIILTSDG 166 Query 191 LILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTP 250 LILTNNHV+AAAA P +T V SDGRT FTVVG DP+SDIAVVR + VSGLTP Sbjct 167 LILTNNHVVAAAADGPGAPGGAQTKVILSDGRTTSFTVVGTDPSSDIAVVRAEKVSGLTP 226 Query 251 ISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDA 310 I+LGSSSDLRVGQ V+AIGSPLGLEGTVTTGI+SALNRPV+ G+ NQNTVLDAIQTDA Sbjct 227 ITLGSSSDLRVGQDVVAIGSPLGLEGTVTTGIISALNRPVAAGGDTRNQNTVLDAIQTDA 286 Query 311 AINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELIS 370 AINPGNSGGALVNMN +LVGVNSAIAT+G DSA AQSGSIGLGFAIPVDQAKRIADELI Sbjct 287 AINPGNSGGALVNMNGELVGVNSAIATMGGDSAQAQSGSIGLGFAIPVDQAKRIADELIQ 346 Query 371 TGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVA 430 G ASHASLGVQV+ND T GAKIVEV GGAAA AG+P GVVVTKVDDR INSADALVA Sbjct 347 NGSASHASLGVQVSNDAATDGAKIVEVNQGGAAAAAGLPSGVVVTKVDDRVINSADALVA 406 Query 431 AVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 AVRSKAPG V LT+ DPSG ++VQVTLGK +Q Sbjct 407 AVRSKAPGDKVTLTYLDPSGKPQSVQVTLGKMQQ 440 >gi|15826989|ref|NP_301252.1| serine protease [Mycobacterium leprae TN] gi|221229467|ref|YP_002502883.1| putative secreted serine protease [Mycobacterium leprae Br4923] gi|13092536|emb|CAC29684.1| possible secreted serine protease [Mycobacterium leprae] gi|219932574|emb|CAR70269.1| possible secreted serine protease [Mycobacterium leprae Br4923] Length=382 Score = 522 bits (1345), Expect = 4e-146, Method: Compositional matrix adjust. Identities = 308/383 (81%), Positives = 335/383 (88%), Gaps = 5/383 (1%) Query 86 MTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSG-GPVAASAAP 144 M PP + +RPRAGMLA+ A+ IAVVSAGIGG AA++V AG +G GPV AA Sbjct 1 MIPPGRVADRRPRAGMLAVSALAIAVVSAGIGGVAATVVALGTRVAGGNGAGPVTGPAA- 59 Query 145 SIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAK 204 S+PAANMP GSVEQVA KVVPSVVMLETDLGRQSEEGSG+ILSA+GLILTNNHV+A AAK Sbjct 60 SVPAANMPSGSVEQVAVKVVPSVVMLETDLGRQSEEGSGVILSADGLILTNNHVVAVAAK 119 Query 205 PPLGSP---PPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRV 261 P G PKTTVTF DGRTA FTVVGADPTSDIAVVRVQ +SGLTPI++GSS+DLRV Sbjct 120 PGGGPGGGLSPKTTVTFFDGRTASFTVVGADPTSDIAVVRVQSISGLTPITMGSSADLRV 179 Query 262 GQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGAL 321 GQPV+A+GSPLGL GTVT+GIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGAL Sbjct 180 GQPVVAVGSPLGLAGTVTSGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGAL 239 Query 322 VNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 381 VNM QLVGVNSAIATLGADS DAQSGSIGLGFAIPVDQAKRIADELISTGKA+HASLGV Sbjct 240 VNMGGQLVGVNSAIATLGADSGDAQSGSIGLGFAIPVDQAKRIADELISTGKATHASLGV 299 Query 382 QVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATV 441 QV DK T GAK+++VVAGGAAANA VPKGVV+TKVDDR I+SADALVAAVRSKAPG V Sbjct 300 QVATDKGTPGAKVMDVVAGGAAANAAVPKGVVLTKVDDRLISSADALVAAVRSKAPGDKV 359 Query 442 ALTFQDPSGGSRTVQVTLGKAEQ 464 +LT+QD SG SRTVQVTLGKAEQ Sbjct 360 SLTYQDQSGSSRTVQVTLGKAEQ 382 >gi|108801263|ref|YP_641460.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. MCS] gi|119870414|ref|YP_940366.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. KMS] gi|108771682|gb|ABG10404.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. MCS] gi|119696503|gb|ABL93576.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium sp. KMS] Length=440 Score = 521 bits (1341), Expect = 1e-145, Method: Compositional matrix adjust. Identities = 307/454 (68%), Positives = 343/454 (76%), Gaps = 22/454 (4%) Query 19 MTNHPRYSPPPQQ-PG------TPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYRQPYEAL 71 MTNHPRYS PPQQ PG GY + Q +DWRY P Q+R PY+ Sbjct 1 MTNHPRYSTPPQQQPGHRPVGPDTGYQGADPYSQQQPYDWRYAAQPQ---QQFRAPYDPY 57 Query 72 GGTRPGLIPGVIPT-MTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAP 130 G PT + P P ++R RAG L +GA+ +AVVSAGIGG A++V +R Sbjct 58 RGAAQ-------PTAVMPQPRPTQKRSRAGALTVGALAVAVVSAGIGGGVATMVQQDR-- 108 Query 131 AGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEG 190 PS G AAPS+PAA +P GSVEQVAAKVVPSVV LET+LGR SEEGSGIIL+++G Sbjct 109 --PSFGSSITGAAPSVPAAALPAGSVEQVAAKVVPSVVKLETNLGRASEEGSGIILTSDG 166 Query 191 LILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTP 250 LILTNNHV+AAAA P +T V SDGRT FTVVG DP+SDIAVVR + VSGLTP Sbjct 167 LILTNNHVVAAAADGPGAPGGAQTKVILSDGRTTSFTVVGTDPSSDIAVVRAEKVSGLTP 226 Query 251 ISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDA 310 I+LGSSSDLRVGQ V+AIGSPLGLEGTVTTGI+SALNRPV+ G+ NQNTVLDAIQTDA Sbjct 227 ITLGSSSDLRVGQDVVAIGSPLGLEGTVTTGIISALNRPVAAGGDTRNQNTVLDAIQTDA 286 Query 311 AINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELIS 370 AINPGNSGGALVNMN +LVGVNSAIAT+G DSA AQSGSIGLGFAIPVDQAKRIADELI Sbjct 287 AINPGNSGGALVNMNGELVGVNSAIATMGGDSAQAQSGSIGLGFAIPVDQAKRIADELIQ 346 Query 371 TGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVA 430 G ASHASLGVQV+ND T GAKIVEV GGAAA AG+P GVVVTKVDDR INSADALVA Sbjct 347 NGSASHASLGVQVSNDAATDGAKIVEVNQGGAAAAAGLPSGVVVTKVDDRVINSADALVA 406 Query 431 AVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 AVRSKAPG V LT+ DPSG ++VQVTLGK +Q Sbjct 407 AVRSKAPGDKVTLTYLDPSGKPQSVQVTLGKMQQ 440 >gi|254549968|ref|ZP_05140415.1| serine protease pepD [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=272 Score = 516 bits (1329), Expect = 3e-144, Method: Compositional matrix adjust. Identities = 270/272 (99%), Positives = 271/272 (99%), Gaps = 0/272 (0%) Query 193 LTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPIS 252 +TNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPIS Sbjct 1 MTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPIS 60 Query 253 LGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAI 312 LGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAI Sbjct 61 LGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAI 120 Query 313 NPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG 372 NPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG Sbjct 121 NPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG 180 Query 373 KASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAV 432 KASHASLGVQVTNDKDT GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAV Sbjct 181 KASHASLGVQVTNDKDTPGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAV 240 Query 433 RSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 RSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ Sbjct 241 RSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 272 >gi|254823445|ref|ZP_05228446.1| hypothetical protein MintA_26181 [Mycobacterium intracellulare ATCC 13950] Length=381 Score = 503 bits (1294), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 303/382 (80%), Positives = 329/382 (87%), Gaps = 20/382 (5%) Query 102 LAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAA 161 + GA+ IAVVSAGIGGAAA+ + +G GG V AAPS+PAANMPPGSVEQVA+ Sbjct 1 MTAGALAIAVVSAGIGGAAATAIELGDHASGNGGGRVVG-AAPSVPAANMPPGSVEQVAS 59 Query 162 KVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAA---KPPLG---------- 208 KVVPSVVMLETD+GRQSEEGSGI+LS +GLILTNNHV+AAAA KPP G Sbjct 60 KVVPSVVMLETDIGRQSEEGSGIVLSTDGLILTNNHVVAAAAGSPKPPAGLPGAPVPPVA 119 Query 209 -----SPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQ 263 P PKTTVTFSDGRTAPFTVVG DPTSDIAV+RVQG+SGLTPISLGSSSDL VGQ Sbjct 120 PGGPGGPTPKTTVTFSDGRTAPFTVVGTDPTSDIAVIRVQGMSGLTPISLGSSSDLHVGQ 179 Query 264 PVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVN 323 PV+AIGSPLGL GTVTTGIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGALVN Sbjct 180 PVVAIGSPLGLSGTVTTGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGALVN 239 Query 324 MNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQV 383 M+ QLVGVNSAIATLG +S DAQSGSIGLGFAIPVDQAKRIADELI+TGKASHASLGVQV Sbjct 240 MSGQLVGVNSAIATLGGESPDAQSGSIGLGFAIPVDQAKRIADELIATGKASHASLGVQV 299 Query 384 TNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVAL 443 T+DK T GAK+V+VVAGGAAA AGVPK VVVTKVDDRPINSADALVAAVRSKAPG ++L Sbjct 300 TSDKGTPGAKVVDVVAGGAAAAAGVPKNVVVTKVDDRPINSADALVAAVRSKAPGDKISL 359 Query 444 TFQDPS-GGSRTVQVTLGKAEQ 464 TF DP+ GGSRT+ VTLGKA+Q Sbjct 360 TFSDPAGGGSRTLPVTLGKADQ 381 >gi|342860581|ref|ZP_08717232.1| hypothetical protein MCOL_16941 [Mycobacterium colombiense CECT 3035] gi|342132236|gb|EGT85477.1| hypothetical protein MCOL_16941 [Mycobacterium colombiense CECT 3035] Length=385 Score = 496 bits (1277), Expect = 3e-138, Method: Compositional matrix adjust. Identities = 305/384 (80%), Positives = 325/384 (85%), Gaps = 29/384 (7%) Query 109 IAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVV 168 IAVVSAGIGGAAA+ V G GG V AAPS+PAANMPPGSVE VA+KVVPSVV Sbjct 3 IAVVSAGIGGAAATAVELGTHATGNGGGRVIG-AAPSVPAANMPPGSVEGVASKVVPSVV 61 Query 169 MLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSP------------------ 210 MLETD+GRQSEEGSGI+LS +GLILTNNHVIAAAA PP G Sbjct 62 MLETDIGRQSEEGSGIVLSTDGLILTNNHVIAAAAGPPKGPGGPSGAPPAAPVPPGIPGG 121 Query 211 ---------PPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRV 261 PKTTVTFSDGRTAPFTVVGADPTSDIAV+RVQG+SGLTPISLGSSSDLRV Sbjct 122 PGGAGAGSPTPKTTVTFSDGRTAPFTVVGADPTSDIAVIRVQGMSGLTPISLGSSSDLRV 181 Query 262 GQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGAL 321 GQPV+AIGSPLGL GTVTTGIVSALNRPVSTTGE+GNQNTVLDAIQTDAAINPGNSGGAL Sbjct 182 GQPVVAIGSPLGLSGTVTTGIVSALNRPVSTTGESGNQNTVLDAIQTDAAINPGNSGGAL 241 Query 322 VNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 381 VNM+ QLVGVNSAIATLG DS DAQSGSIGLGFAIPVDQAKRIADELI+TGKASHASLGV Sbjct 242 VNMSGQLVGVNSAIATLGGDSPDAQSGSIGLGFAIPVDQAKRIADELIATGKASHASLGV 301 Query 382 QVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATV 441 QVTNDK T GAK+V+VVAGGAAA+AGVPK VVVTKVDDRPINSADALVAAVRSKAPG + Sbjct 302 QVTNDKGTPGAKVVDVVAGGAAASAGVPKNVVVTKVDDRPINSADALVAAVRSKAPGDKI 361 Query 442 ALTFQDPS-GGSRTVQVTLGKAEQ 464 +LTFQDP+ GGSRT+ VTLGKA+Q Sbjct 362 SLTFQDPAGGGSRTLPVTLGKADQ 385 >gi|118471908|ref|YP_889724.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium smegmatis str. MC2 155] gi|118173195|gb|ABK74091.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium smegmatis str. MC2 155] Length=444 Score = 489 bits (1260), Expect = 3e-136, Method: Compositional matrix adjust. Identities = 304/450 (68%), Positives = 342/450 (76%), Gaps = 10/450 (2%) Query 19 MTNHPRYS--PPPQQPGTPGYAQGQQQTYSQ--QFDWRYPPSPPPQPTQYRQPYEALGGT 74 MTNHPRYS P P+ TPGY G+ Y Q Q+DWRY P Q Q ++ G Sbjct 1 MTNHPRYSQQPDPRTGATPGYPGGRPDPYQQTSQYDWRYAQQVQQAP-QSPQTHQTQPGF 59 Query 75 RPGLIPGVIPTMTPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPS 134 RP P P+ P + ++ LA GA+ +AVVSAGIGG A+LV N +P Sbjct 60 RPAYDPYRAPSTAQPVAIPAKKRSRAGLAAGALAVAVVSAGIGGGVATLV-HNESPQ--L 116 Query 135 GGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILT 194 G P A AAP++PAA +P GSVEQVAAKVVPSVV LETDLGR SEEGSGIIL+A+GLILT Sbjct 117 GSP-AIGAAPTVPAAALPAGSVEQVAAKVVPSVVKLETDLGRASEEGSGIILTADGLILT 175 Query 195 NNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLG 254 NNHV+AAA G P +T VTF+DG T PFTVVG DP+SDIAVVR Q VSGLTPI+LG Sbjct 176 NNHVVAAAKGDGPG-PAAQTKVTFADGTTRPFTVVGTDPSSDIAVVRAQDVSGLTPITLG 234 Query 255 SSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINP 314 SS++LRVGQ V+AIGSPLGLEGTVTTGIVSALNRPV+ G+ NQNTVLDAIQTDAAINP Sbjct 235 SSANLRVGQDVVAIGSPLGLEGTVTTGIVSALNRPVAAGGDTRNQNTVLDAIQTDAAINP 294 Query 315 GNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKA 374 GNSGGALVNMN +LVG+NSAIAT+G DS +AQSGSIGLGFAIPVDQAKRIADELI G A Sbjct 295 GNSGGALVNMNGELVGINSAIATMGGDSPNAQSGSIGLGFAIPVDQAKRIADELIQNGVA 354 Query 375 SHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRS 434 SHASLGVQV ND+ + GAKIVEV GGAAA AG+P GVVVTKVDDR I SADALVAAVRS Sbjct 355 SHASLGVQVANDRSSDGAKIVEVNDGGAAAAAGLPSGVVVTKVDDRVIGSADALVAAVRS 414 Query 435 KAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 KAPG V LT+ D +G +TV VTLGKAEQ Sbjct 415 KAPGEKVTLTYLDQAGKPQTVDVTLGKAEQ 444 >gi|333989574|ref|YP_004522188.1| serine protease PepD [Mycobacterium sp. JDM601] gi|333485542|gb|AEF34934.1| serine protease PepD [Mycobacterium sp. JDM601] Length=365 Score = 468 bits (1203), Expect = 1e-129, Method: Compositional matrix adjust. Identities = 257/334 (77%), Positives = 289/334 (87%), Gaps = 4/334 (1%) Query 135 GGPVAASAAPSIPAA-NMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLIL 193 GG + +P +PAA +P GSVE+VAAKVVPSVVMLETDLGRQSEEGSGIILSA+G+IL Sbjct 32 GGHTTSLQSPGLPAAVTLPDGSVEKVAAKVVPSVVMLETDLGRQSEEGSGIILSADGMIL 91 Query 194 TNNHVIAAAAKPPLGSP-PPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPIS 252 TNNHV+AAAAK S PPKTTVTF+DGRTAPF+VVG DP SDIAVVRVQGVS LTPI+ Sbjct 92 TNNHVVAAAAKADAMSKAPPKTTVTFADGRTAPFSVVGTDPASDIAVVRVQGVSDLTPIT 151 Query 253 LGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAI 312 LGSS+DLRVGQ V+A+GSPLGLEGTVTTGIVSALNRPVST+GEAGNQNTVLDAIQTDAAI Sbjct 152 LGSSADLRVGQHVVAVGSPLGLEGTVTTGIVSALNRPVSTSGEAGNQNTVLDAIQTDAAI 211 Query 313 NPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELIST- 371 NPGNSGGALVNMN LVG+NSAIAT+G D+A+AQSGSIGLGFAIPVDQAKRIADELI++ Sbjct 212 NPGNSGGALVNMNGDLVGINSAIATMGGDAAEAQSGSIGLGFAIPVDQAKRIADELINSP 271 Query 372 -GKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVA 430 ASHASLGV+VT+++ GAK+VEVV G A+ AG+P+GV VT D RPI SADALVA Sbjct 272 DHTASHASLGVRVTSERSLHGAKVVEVVPGEPASKAGLPEGVTVTAFDKRPIGSADALVA 331 Query 431 AVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 AVRSKAPG V LT+ D G S+TVQVTLGKA+Q Sbjct 332 AVRSKAPGDQVTLTYLDAGGASKTVQVTLGKAQQ 365 >gi|145222479|ref|YP_001133157.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium gilvum PYR-GCK] gi|145214965|gb|ABP44369.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium gilvum PYR-GCK] Length=515 Score = 464 bits (1194), Expect = 1e-128, Method: Compositional matrix adjust. Identities = 294/474 (63%), Positives = 343/474 (73%), Gaps = 30/474 (6%) Query 14 EQPSDMTNHPRYSPPPQQPGTPGYAQGQ----------QQTYSQQ----FDWRYPPSPPP 59 E SDMTNHPRYSP PQ GY GQ +Y QQ +DWRY + Sbjct 49 EHCSDMTNHPRYSPTPQPGRQSGYT-GQVPPGSAGPAGSGSYEQQGTGSWDWRY--ATEQ 105 Query 60 QPTQYRQPYEALGGTRPGLIPGVIPTMTPPPGMVRQ-----RPRAG-MLAIGAVTIAVVS 113 Q +R PY++ G P PPPGM RQ R R+G LA GA+ +A+VS Sbjct 106 QRQAFRGPYDSPYDPYRGAPMPGGPGQFPPPGMPRQPQPQPRKRSGSALAAGAIALALVS 165 Query 114 AGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETD 173 GIGG A L P GG A+ AAPS+PAA++P GSVE VAAKVVPSVV LE + Sbjct 166 GGIGGGVAMLA----HPDHSLGGISASGAAPSMPAASVPGGSVEAVAAKVVPSVVKLEVN 221 Query 174 LGRQSEEGSGIILSAEGLILTNNHVIAAAAK---PPLGSPPPKTTVTFSDGRTAPFTVVG 230 GR +EEGSG+ILS++GLILTNNHV+AAAA P +T VTF+DG+++ F V+G Sbjct 222 QGRSTEEGSGVILSSDGLILTNNHVVAAAADNGAPGAPPGAAQTKVTFADGKSSTFEVIG 281 Query 231 ADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPV 290 DP SDIAVVR + V+ LTPI++GSS+DLRVGQ V+AIGSPLGLEGTVTTGI+SALNRPV Sbjct 282 TDPGSDIAVVRAKNVTDLTPIAVGSSADLRVGQDVVAIGSPLGLEGTVTTGIISALNRPV 341 Query 291 STTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSI 350 + +G+A NQNTVLDAIQTDAAINPGNSGGALVNMN +LVG+NSAIAT+GAD+ Q GSI Sbjct 342 AASGDARNQNTVLDAIQTDAAINPGNSGGALVNMNGELVGINSAIATMGADAGGPQGGSI 401 Query 351 GLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPK 410 GLGFAIPVDQAKRIADE+I TG AS ASLGVQV N+ GAKIVEV AGGAA+ AG+P Sbjct 402 GLGFAIPVDQAKRIADEIIQTGSASRASLGVQVGNEAGVDGAKIVEVTAGGAASAAGLPS 461 Query 411 GVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 GV+VTK+DDR I+SADALVAAVRSKAPG V LT+QD SG RTV VTLGKA+Q Sbjct 462 GVIVTKLDDRAISSADALVAAVRSKAPGDKVTLTYQDASGKPRTVDVTLGKAKQ 515 >gi|315442924|ref|YP_004075803.1| trypsin-like serine protease with C-terminal PDZ domain [Mycobacterium sp. Spyr1] gi|315261227|gb|ADT97968.1| trypsin-like serine protease with C-terminal PDZ domain [Mycobacterium sp. Spyr1] Length=462 Score = 456 bits (1174), Expect = 3e-126, Method: Compositional matrix adjust. Identities = 291/469 (63%), Positives = 340/469 (73%), Gaps = 30/469 (6%) Query 19 MTNHPRYSPPPQQPGTPGYAQGQ----------QQTYSQQ----FDWRYPPSPPPQPTQY 64 MTNHPRYSP PQ GY GQ +Y QQ +DWRY + Q + Sbjct 1 MTNHPRYSPTPQPGRQSGYT-GQVPPGSAGPAGSGSYEQQGTGSWDWRY--ATEQQRQAF 57 Query 65 RQPYEALGGTRPGLIPGVIPTMTPPPGMVRQ-----RPRAG-MLAIGAVTIAVVSAGIGG 118 R PY++ G P PPPGM RQ R R+G LA GA+ +A+VS GIGG Sbjct 58 RGPYDSPYDPYRGAPMPGGPGQFPPPGMPRQPQPQPRKRSGSALAAGAIALALVSGGIGG 117 Query 119 AAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQS 178 A L P GG A+ AAPS+PAA++P GSVE VAAKVVPSVV LE + GR + Sbjct 118 GVAMLA----HPDHSLGGISASGAAPSMPAASVPGGSVEAVAAKVVPSVVKLEVNQGRST 173 Query 179 EEGSGIILSAEGLILTNNHVIAAAAK---PPLGSPPPKTTVTFSDGRTAPFTVVGADPTS 235 EEGSG+ILS++GLILTNNHV+AAAA P +T VTF+DG+++ F V+G DP S Sbjct 174 EEGSGVILSSDGLILTNNHVVAAAADNGAPGAPPGAAQTKVTFADGKSSTFEVIGTDPGS 233 Query 236 DIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGE 295 DIAVVR + V+ LTPI++GSS+DLRVGQ V+AIGSPLGLEGTVTTGI+SALNRPV+ +G+ Sbjct 234 DIAVVRAKNVTDLTPIAVGSSADLRVGQDVVAIGSPLGLEGTVTTGIISALNRPVAASGD 293 Query 296 AGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFA 355 A NQNTVLDAIQTDAAINPGNSGGALVNMN +LVG+NSAIAT+GAD+ Q GSIGLGFA Sbjct 294 ARNQNTVLDAIQTDAAINPGNSGGALVNMNGELVGINSAIATMGADAGGPQGGSIGLGFA 353 Query 356 IPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVT 415 IPVDQAKRIADE+I TG AS ASLGVQV N+ GAKIVEV AGGAA+ AG+P GV+VT Sbjct 354 IPVDQAKRIADEIIQTGSASRASLGVQVGNEAGVDGAKIVEVTAGGAASAAGLPSGVIVT 413 Query 416 KVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 K+DDR I+SADALVAAVRSKAPG V LT+QD SG RTV VTLGKA+Q Sbjct 414 KLDDRAISSADALVAAVRSKAPGDKVTLTYQDASGKPRTVDVTLGKAKQ 462 >gi|120405792|ref|YP_955621.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium vanbaalenii PYR-1] gi|119958610|gb|ABM15615.1| peptidase S1 and S6, chymotrypsin/Hap [Mycobacterium vanbaalenii PYR-1] Length=456 Score = 434 bits (1117), Expect = 1e-119, Method: Compositional matrix adjust. Identities = 296/464 (64%), Positives = 340/464 (74%), Gaps = 26/464 (5%) Query 19 MTNHPRYSPPPQ------QPGT--PGYAQGQQQTYSQQ----FDWRYPPSPPPQPTQYRQ 66 MTN P YSP PQ PG PG+A + +Y QQ +DWRY + Q +R Sbjct 1 MTNQPSYSPTPQPGRQSGYPGQVPPGHAGPRTGSYEQQGSGGWDWRY--ATEQQRQAFRA 58 Query 67 PYEALGG----TRPGLIPGVIPTM-TPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAA 121 PY+ G + PG P P M PP R+ RA LA GAV +A+VS GIGG A Sbjct 59 PYDPYAGAPMPSGPGHHP--RPGMPVTPPRQPRKGSRATALAAGAVAVALVSGGIGGGVA 116 Query 122 SLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEG 181 LV + G S A+ AAP +PAA++P GSVE VAA VVPSVV LE GR SEEG Sbjct 117 MLVHPDHGVPGIS----ASGAAPGMPAASVPAGSVEAVAAAVVPSVVKLEVSQGRASEEG 172 Query 182 SGIILSAEGLILTNNHVIAAAAKPPLGSPPP-KTTVTFSDGRTAPFTVVGADPTSDIAVV 240 SG+ILS +GLILTNNHV+A AA P KT VTF+DG+TAPFTV+GADP+SDIAVV Sbjct 173 SGVILSTDGLILTNNHVVATAAGAAGEPGGPAKTKVTFADGKTAPFTVIGADPSSDIAVV 232 Query 241 RVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN 300 R Q VSGLTPI++GSS+DLRVGQ V+AIGSPLGLEGTVTTGI+SALNRPV+ G+A NQN Sbjct 233 RAQNVSGLTPITVGSSADLRVGQDVVAIGSPLGLEGTVTTGIISALNRPVAAGGDARNQN 292 Query 301 TVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQ 360 TVLDAIQTDAAINPGNSGGALVNMN +LVG+NSAIAT+GAD+ Q GSIGLGFAIPVDQ Sbjct 293 TVLDAIQTDAAINPGNSGGALVNMNGELVGINSAIATMGADAGAQQGGSIGLGFAIPVDQ 352 Query 361 AKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDR 420 AKRIADE+I TG AS ASLGVQV N+ GAKIVEV AGGAA+ AG+P GV+VTKVDDR Sbjct 353 AKRIADEIIQTGSASRASLGVQVGNEAGVDGAKIVEVTAGGAASAAGLPSGVIVTKVDDR 412 Query 421 PINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAEQ 464 INSADALVAAVRSKAPG V LT+ DP+G S+++ VTLGKA Q Sbjct 413 LINSADALVAAVRSKAPGDKVTLTYLDPAGKSQSLDVTLGKAGQ 456 >gi|169628173|ref|YP_001701822.1| putative serine protease [Mycobacterium abscessus ATCC 19977] gi|169240140|emb|CAM61168.1| Putative serine protease [Mycobacterium abscessus] Length=437 Score = 429 bits (1104), Expect = 4e-118, Method: Compositional matrix adjust. Identities = 226/317 (72%), Positives = 268/317 (85%), Gaps = 7/317 (2%) Query 147 PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPP 206 P A++P GSVEQVAAKV+PSVV LET +GR SEEGSG+ILSA+GL+LTN HV+ AA Sbjct 123 PVASLPAGSVEQVAAKVLPSVVKLETIMGRSSEEGSGVILSADGLVLTNAHVVQAA---- 178 Query 207 LGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVL 266 G P KTT T + G+T+PFTVVG DP +DIAVVR+ G SGLTPI+LGSS++L VGQ V+ Sbjct 179 -GDPGAKTTATIAGGKTSPFTVVGIDPGTDIAVVRITGASGLTPIALGSSANLVVGQSVV 237 Query 267 AIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNA 326 AIGSPLGL+GTVTTGIVS+LNRPV T G+AGNQ+TVLDAIQTDAAINPGNSGGALVN+N Sbjct 238 AIGSPLGLDGTVTTGIVSSLNRPVFTAGQAGNQDTVLDAIQTDAAINPGNSGGALVNLNG 297 Query 327 QLVGVNSAIATLGADSA-DAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTN 385 +LVG+NSAIAT+G DS+ + Q GSIGLGFAIPVDQAKR+AD+LI+ G+A+HASLGV+V N Sbjct 298 ELVGINSAIATMGGDSSGETQGGSIGLGFAIPVDQAKRVADQLITNGRATHASLGVRVGN 357 Query 386 DKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTF 445 DK+ GA+IVEVVAGGAA AG+P G VVTKVD+RP+NSAD LVAAVRSKAPG V LT+ Sbjct 358 DKEVQGARIVEVVAGGAAEKAGIPNGAVVTKVDNRPVNSADGLVAAVRSKAPGDKVTLTY 417 Query 446 QDPSGG-SRTVQVTLGK 461 D +GG +T VTLG+ Sbjct 418 TDGNGGQEKTADVTLGE 434 >gi|169631386|ref|YP_001705035.1| putative serine protease [Mycobacterium abscessus ATCC 19977] gi|169243353|emb|CAM64381.1| Putative serine protease [Mycobacterium abscessus] Length=488 Score = 376 bits (965), Expect = 5e-102, Method: Compositional matrix adjust. Identities = 227/399 (57%), Positives = 270/399 (68%), Gaps = 64/399 (16%) Query 129 APAGPSGGPVAASAAPSI------PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGS 182 APAG PVA +P+ PAA GSVE+V+AKV+PSVV L+ GRQ E GS Sbjct 89 APAGQVAAPVAGKPSPATGSTLGRPAATGAAGSVEEVSAKVLPSVVQLQIQSGRQQESGS 148 Query 183 GIILSAEGLILTNNHVIAAAA---KPP-------------LGSPPP-------------- 212 GI+LSA+GLILTNNHV+A+AA +P GS PP Sbjct 149 GIVLSADGLILTNNHVVASAAPGAQPSAPVTEPDSPFGGQFGSLPPGIFPGEQQPGGYRD 208 Query 213 -------------------------KTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSG 247 K TVT SDGRT PFTVVGADP DIAVVR QGV+ Sbjct 209 GRDGRDSDDYDGRGVRPSARTGDGVKATVTLSDGRTVPFTVVGADPDDDIAVVRAQGVND 268 Query 248 LTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQ 307 LTPIS+GSS DL+VGQ V+A+GSPLGL+GTVTTGI+SALNRPV+T + Q +V+ AIQ Sbjct 269 LTPISIGSSKDLKVGQNVVAVGSPLGLQGTVTTGIISALNRPVATGDDQSGQRSVMSAIQ 328 Query 308 TDAAINPGNSGGALVNMNAQLVGVNSAIATL---GADSADAQSGSIGLGFAIPVDQAKRI 364 TDAAINPGNSGGALV+M+ L+GVNSAIA+L Q+GSIGLGFAIPVDQAKRI Sbjct 329 TDAAINPGNSGGALVDMSGNLIGVNSAIASLSGGQDSQGGGQAGSIGLGFAIPVDQAKRI 388 Query 365 ADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINS 424 ADEL+STG HASLGVQ+ + KD GA + +V G AAA AG+PKG V+TKVD++ I+ Sbjct 389 ADELVSTGTVRHASLGVQLASSKDAPGAVVAGIVRGSAAATAGLPKGAVITKVDNQVIDG 448 Query 425 ADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAE 463 DALVAAVR+KAPG T+ALT+QDPSG +RTVQVTLG++E Sbjct 449 PDALVAAVRAKAPGDTMALTYQDPSGDARTVQVTLGQSE 487 >gi|325676319|ref|ZP_08155998.1| serine protease C-terminal domain protein [Rhodococcus equi ATCC 33707] gi|325552880|gb|EGD22563.1| serine protease C-terminal domain protein [Rhodococcus equi ATCC 33707] Length=461 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 211/316 (67%), Positives = 244/316 (78%), Gaps = 11/316 (3%) Query 147 PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPP 206 PA+N P GSVE VAAKVVPSVV ++ R EGSG+ILS++GLI+TNNHVIA Sbjct 151 PASNAPAGSVEAVAAKVVPSVVQIQVAGTRGEGEGSGVILSSDGLIMTNNHVIAG----- 205 Query 207 LGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVL 266 G K V FSDG TAP T+VG DPTSDIAV++V G SGLTPI LGSS D++VG+ V+ Sbjct 206 -GGTDGKLLVAFSDGSTAPATLVGTDPTSDIAVIKVDGKSGLTPIELGSSEDVKVGEEVV 264 Query 267 AIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNA 326 AIGSPLGL GTVT GIVSAL+RPVST+GE GNQNTV+DAIQTDAAINPGNSGGALVNM Sbjct 265 AIGSPLGLAGTVTAGIVSALDRPVSTSGETGNQNTVIDAIQTDAAINPGNSGGALVNMEG 324 Query 327 QLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTND 386 QLVG+N+AIAT A Q GSIGLGFAIPVDQA+RIADEL+ TGKA+ A +GVQV Sbjct 325 QLVGINTAIAT-----AGGQGGSIGLGFAIPVDQARRIADELVKTGKATQAIIGVQVAAK 379 Query 387 KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQ 446 T GA +V+V GG A AG+PKG VVTKVDDR I S DAL+AA+RS APG V++T++ Sbjct 380 DATGGATVVDVTGGGPAEKAGIPKGAVVTKVDDRVITSGDALIAAIRSHAPGDKVSVTYK 439 Query 447 DPSGGSRTVQVTLGKA 462 DPSG S+TV V LG A Sbjct 440 DPSGNSKTVDVELGTA 455 >gi|312138614|ref|YP_004005950.1| serine peptidase [Rhodococcus equi 103S] gi|311887953|emb|CBH47265.1| putative serine peptidase [Rhodococcus equi 103S] Length=461 Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 211/316 (67%), Positives = 244/316 (78%), Gaps = 11/316 (3%) Query 147 PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPP 206 PA+N P GSVE VAAKVVPSVV ++ R EGSG+ILS++GLI+TNNHVIA Sbjct 151 PASNAPAGSVEAVAAKVVPSVVQIQVAGTRGEGEGSGVILSSDGLIMTNNHVIAG----- 205 Query 207 LGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVL 266 G K V FSDG TAP T+VG DPTSDIAV++V G SGLTPI LGSS D++VG+ V+ Sbjct 206 -GGTDGKLLVAFSDGSTAPATLVGTDPTSDIAVIKVDGKSGLTPIELGSSEDVKVGEEVV 264 Query 267 AIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNA 326 AIGSPLGL GTVT GIVSAL+RPVST+GE GNQNTV+DAIQTDAAINPGNSGGALVNM Sbjct 265 AIGSPLGLAGTVTAGIVSALDRPVSTSGETGNQNTVIDAIQTDAAINPGNSGGALVNMEG 324 Query 327 QLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTND 386 QLVG+N+AIAT A Q GSIGLGFAIPVDQA+RIADEL+ TGKA+ A +GVQV Sbjct 325 QLVGINTAIAT-----AGGQGGSIGLGFAIPVDQARRIADELVKTGKATQAIIGVQVAAK 379 Query 387 KDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQ 446 T GA +V+V GG A AG+PKG VVTKVDDR I S DAL+AA+RS APG V++T++ Sbjct 380 DATGGATVVDVTGGGPAEKAGIPKGAVVTKVDDRVITSGDALIAAIRSHAPGDKVSVTYK 439 Query 447 DPSGGSRTVQVTLGKA 462 DPSG S+TV V LG A Sbjct 440 DPSGNSKTVDVELGTA 455 >gi|111022590|ref|YP_705562.1| serine protease, C-terminal [Rhodococcus jostii RHA1] gi|110822120|gb|ABG97404.1| possible serine protease, C-terminal [Rhodococcus jostii RHA1] Length=495 Score = 359 bits (921), Expect = 6e-97, Method: Compositional matrix adjust. Identities = 244/475 (52%), Positives = 304/475 (64%), Gaps = 31/475 (6%) Query 14 EQPSDMTNHPRYSPPPQQPGTP----GYAQGQQQTYSQQFDWRYPPSPPPQPTQ-YRQPY 68 +QP+ + P Y P Q P TP G GQQ + + P P QPTQ + QP Sbjct 25 DQPAHPQSTPGYHPTEQFPATPQNPAGGPTGQQPYGAAGYPQGNPYGAPQQPTQQFGQPQ 84 Query 69 EALGGTRPGLIPGVIPTMTPP---PGM-------------VRQRPRAGMLAIGAVTIAVV 112 G PG P P PG+ +RP + +GAV +A+V Sbjct 85 HGAPG-HPGAQHAAGPHGAPQGPFPGLQGPGQAGAGSTATATKRPARTAIVVGAVALALV 143 Query 113 SAGIGGAAASL-VGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQVAAKVVPSVVMLE 171 S GIGG SL N + A + A + PAAN P GSV+ VA KVVPSVV +E Sbjct 144 SGGIGGVVGSLATDRNGSGAAVTNSLDAPKNNTATPAANAPAGSVQAVANKVVPSVVQIE 203 Query 172 TDLGRQSEEGSG-IILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVG 230 S I++S++G+ILTNNHV AAAK K TV FSDG TA +VG Sbjct 204 VATAGGSGGEGSGIVISSDGMILTNNHVAGAAAKGG------KLTVAFSDGSTADAKLVG 257 Query 231 ADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPV 290 ADP SD+AV++V G + LTPI LG+S +++VGQ V+AIGSPLGL GTVT GI+SALNRPV Sbjct 258 ADPVSDLAVIKVDGKTDLTPIELGTSGNVQVGQQVVAIGSPLGLAGTVTEGIISALNRPV 317 Query 291 STTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSI 350 ST+GE+GNQNTV+DA+QTDAAINPGNSGGALVNM+ QL+G+N+AIA++G A QSGSI Sbjct 318 STSGESGNQNTVIDALQTDAAINPGNSGGALVNMDGQLIGINTAIASIGGSGAGEQSGSI 377 Query 351 GLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPK 410 GLGFAIPVDQA+RIADEL+ TGKA+ A +G+QV + GA +VEV AG A AG+PK Sbjct 378 GLGFAIPVDQARRIADELVKTGKATQAVIGIQVPSQDAANGATVVEVTAGSPAEKAGIPK 437 Query 411 GVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSG-GSRTVQVTLGKAEQ 464 G V+TKVDDR I S DAL+AA+RS APG V++T+ D +G ++TV VTLG AEQ Sbjct 438 GSVITKVDDRVITSGDALIAAIRSHAPGDNVSITYTDGNGSNTKTVDVTLGTAEQ 492 >gi|226365096|ref|YP_002782879.1| S1C family peptidase [Rhodococcus opacus B4] gi|226243586|dbj|BAH53934.1| S1C family peptidase [Rhodococcus opacus B4] Length=494 Score = 353 bits (906), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 194/313 (62%), Positives = 239/313 (77%), Gaps = 8/313 (2%) Query 154 GSVEQVAAKVVPSVVMLETDLGRQSEEGSG-IILSAEGLILTNNHVIAAAAKPPLGSPPP 212 GSV+ VA KVVPSVV +E S I++S++G+ILTNNHV AAAK Sbjct 185 GSVQAVANKVVPSVVQIEVATAGGSGGEGSGIVISSDGMILTNNHVAGAAAKGG------ 238 Query 213 KTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPL 272 K TV FSDG TA +VGADP SD+AV++V G + LTPI LG+S +++VGQ V+AIGSPL Sbjct 239 KLTVAFSDGSTADAKLVGADPVSDLAVIKVDGKTDLTPIELGTSGNVQVGQQVVAIGSPL 298 Query 273 GLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVN 332 GL GTVT GI+SALNRPVST+GE+GNQNTV+DA+QTDAAINPGNSGGALVNM+ QL+G+N Sbjct 299 GLAGTVTEGIISALNRPVSTSGESGNQNTVIDALQTDAAINPGNSGGALVNMDGQLIGIN 358 Query 333 SAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGA 392 +AIA++G A QSGSIGLGFAIPVDQA+RIADEL+ TGKA+ A +G+QV + GA Sbjct 359 TAIASIGGSGAGEQSGSIGLGFAIPVDQARRIADELVKTGKATQAVIGIQVPSQDAANGA 418 Query 393 KIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSG-G 451 +VEV +G A AG+PKG V+TKVDDR I S DAL+AA+RS APG V++T+ D +G Sbjct 419 TVVEVTSGSPAEKAGIPKGSVITKVDDRVITSGDALIAAIRSHAPGDNVSITYTDGNGSN 478 Query 452 SRTVQVTLGKAEQ 464 S+TV VTLG AEQ Sbjct 479 SKTVDVTLGTAEQ 491 >gi|229495059|ref|ZP_04388805.1| protease [Rhodococcus erythropolis SK121] gi|229317990|gb|EEN83865.1| protease [Rhodococcus erythropolis SK121] Length=360 Score = 332 bits (851), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 192/315 (61%), Positives = 242/315 (77%), Gaps = 11/315 (3%) Query 149 ANMPPGSVEQVAAKVVPSVVMLETDLGR-QSEEGSGIILSAEGLILTNNHVIAAAAKPPL 207 +N P GSV+ VA+KVVPSVV +E + Q EGSG+ILS++GLILTNNHV Sbjct 50 SNAPAGSVQAVASKVVPSVVQIEVATAQGQGGEGSGVILSSDGLILTNNHV--------A 101 Query 208 GSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLA 267 G+ + V FSDG A T+VGADP SDIAV++V G + LTPI LG+S D++VGQ V+A Sbjct 102 GAQGAQLRVAFSDGTKASATLVGADPVSDIAVIKVDGRNDLTPIDLGNSGDVQVGQQVVA 161 Query 268 IGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQ 327 +GSPLGL GTVT GI+SAL+RPVST+GE+GNQNTV+DA+QTDAAINPGNSGGALVNM+ Q Sbjct 162 VGSPLGLAGTVTEGIISALDRPVSTSGESGNQNTVIDALQTDAAINPGNSGGALVNMDGQ 221 Query 328 LVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDK 387 L+G+N+AIA+LGA S Q GSIGLGFAIP+DQA+R+ADELI TGKA+ A +GV V + Sbjct 222 LIGINTAIASLGASSG-TQGGSIGLGFAIPIDQARRVADELIKTGKATQAMIGVTVPSQD 280 Query 388 DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQD 447 + GA +++V A G AA AG+PKG V+TKVDDR + D+L+AAVRS APG V++T+ D Sbjct 281 NADGATVMDVTADGPAAKAGIPKGAVITKVDDRVVADGDSLIAAVRSHAPGDKVSITYSD 340 Query 448 PSGGSRTVQVTLGKA 462 G ++TV VTLG A Sbjct 341 -GGQTKTVDVTLGTA 354 >gi|333921223|ref|YP_004494804.1| S1C family peptidase [Amycolicicoccus subflavus DQS3-9A1] gi|333483444|gb|AEF42004.1| S1C family peptidase [Amycolicicoccus subflavus DQS3-9A1] Length=434 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 189/329 (58%), Positives = 241/329 (74%), Gaps = 11/329 (3%) Query 134 SGGPVAASA-APSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLI 192 SGG A SA A A+ P GSV+ A +++PSVVM++ R GSG+IL+++GLI Sbjct 109 SGGSSALSAPAVGQGASAAPEGSVQWAAERIIPSVVMIDVRTERAQGSGSGVILTSDGLI 168 Query 193 LTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPIS 252 +TNNHVIA P G V+F DG TA V+ DP +D+AVV+V+G + LTP + Sbjct 169 VTNNHVIA-----PSGG---TVEVSFYDGTTATGRVIAGDPNTDVAVVQVEGRTDLTPAT 220 Query 253 LGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAI 312 LGSSSDLRVGQ V+A+GSPLGL+GTVT+GIVSAL+RPVS TGE G+Q TV+DAIQTDAAI Sbjct 221 LGSSSDLRVGQDVVAVGSPLGLDGTVTSGIVSALHRPVSATGEGGDQYTVIDAIQTDAAI 280 Query 313 NPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTG 372 NPGNSGGALVNM+ ++VG+N+AIATLGA GSIGLGF+IP+DQA+RIADEL +TG Sbjct 281 NPGNSGGALVNMDGEIVGINTAIATLGA-MPGVNPGSIGLGFSIPIDQARRIADELATTG 339 Query 373 KASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAV 432 +A ASLGV V GA + EV++G AA +AG+P+G ++T++DDR I SA L+AAV Sbjct 340 RAETASLGVFVDMRDPERGALVTEVISGSAAQDAGIPEGAIITRLDDRIITSAAGLIAAV 399 Query 433 RSKAPGATVALTFQD-PSGGSRTVQVTLG 460 R++ PG TVA+T+ D P G R V V LG Sbjct 400 RAQVPGQTVAITWTDGPGGEERAVDVQLG 428 >gi|226307883|ref|YP_002767843.1| S1 family peptidase [Rhodococcus erythropolis PR4] gi|226187000|dbj|BAH35104.1| putative S1 family peptidase [Rhodococcus erythropolis PR4] Length=513 Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust. Identities = 191/313 (62%), Positives = 240/313 (77%), Gaps = 11/313 (3%) Query 149 ANMPPGSVEQVAAKVVPSVVMLETDLGR-QSEEGSGIILSAEGLILTNNHVIAAAAKPPL 207 +N P GSV+ VA+KVVPSVV +E + Q EGSG+ILS++GLILTNNHV A Sbjct 203 SNAPAGSVQAVASKVVPSVVQIEVATAQGQGGEGSGVILSSDGLILTNNHVAGAQGA--- 259 Query 208 GSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLA 267 + V FSDG A T+VGADP SDIAV++V G + LTPI LG+S D++VGQ V+A Sbjct 260 -----QLRVAFSDGTKASATLVGADPVSDIAVIKVDGRNDLTPIDLGNSGDVQVGQQVVA 314 Query 268 IGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQ 327 +GSPLGL GTVT GI+SAL+RPVST+GE+GNQNTV+DA+QTDAAINPGNSGGALVNM+ Q Sbjct 315 VGSPLGLAGTVTEGIISALDRPVSTSGESGNQNTVIDALQTDAAINPGNSGGALVNMDGQ 374 Query 328 LVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDK 387 L+G+N+AIA+LGA S Q GSIGLGFAIP+DQA+R+ADELI TGKA+ A +GV V + Sbjct 375 LIGINTAIASLGASSG-TQGGSIGLGFAIPIDQARRVADELIKTGKATQAMIGVTVPSQD 433 Query 388 DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQD 447 + GA +++V A G AA AG+PKG V+TKVDDR + D+L+AAVRS APG V++T+ D Sbjct 434 NADGATVMDVTADGPAAKAGIPKGAVITKVDDRVVADGDSLIAAVRSHAPGDKVSITYSD 493 Query 448 PSGGSRTVQVTLG 460 G ++TV VTLG Sbjct 494 -GGQTKTVDVTLG 505 >gi|326383753|ref|ZP_08205438.1| peptidase S1 and S6 chymotrypsin/Hap [Gordonia neofelifaecis NRRL B-59395] gi|326197517|gb|EGD54706.1| peptidase S1 and S6 chymotrypsin/Hap [Gordonia neofelifaecis NRRL B-59395] Length=482 Score = 324 bits (830), Expect = 3e-86, Method: Compositional matrix adjust. Identities = 185/310 (60%), Positives = 229/310 (74%), Gaps = 8/310 (2%) Query 153 PGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPP 212 PGSV+ +A V+PSVV + ++G Q GSG+ILS +G+ILTNNHVI+A G P Sbjct 177 PGSVQSTSAAVLPSVVSITVEVGNQVGSGSGVILSDDGVILTNNHVISAGG----GKPAD 232 Query 213 KTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPL 272 K V+F+DG A V+G DPTSDIAV++ +GL PI++GSS++L VGQ V+A+GSPL Sbjct 233 KILVSFNDGTRAMAKVLGTDPTSDIAVIQAD-KTGLKPITVGSSANLSVGQEVIAVGSPL 291 Query 273 GLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVN 332 GLEGTVTTGI+S+LNRPVSTTG G+ +V+DAIQTDAAINPGNSGGALVN N L+G+N Sbjct 292 GLEGTVTTGIISSLNRPVSTTGADGSVESVMDAIQTDAAINPGNSGGALVNGNGALIGIN 351 Query 333 SAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTL-- 390 SAIAT+ S QSGSIGLGFAIPVDQA RIA+ L + GK ASLGV V D Sbjct 352 SAIATVNGASEQQQSGSIGLGFAIPVDQAMRIANTLRTGGKVQQASLGVNVRPSSDVTQP 411 Query 391 GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSG 450 GA++V VV+GGAA AG+PKG V+T+VDDR I S+DALVAA+RS APG TV +T+ G Sbjct 412 GAQVVNVVSGGAADQAGIPKGAVITQVDDRKIASSDALVAAIRSYAPGDTVKITYVI-DG 470 Query 451 GSRTVQVTLG 460 ++T V LG Sbjct 471 QTKTADVKLG 480 >gi|262201366|ref|YP_003272574.1| peptidase S1 and S6 chymotrypsin/Hap [Gordonia bronchialis DSM 43247] gi|262084713|gb|ACY20681.1| peptidase S1 and S6 chymotrypsin/Hap [Gordonia bronchialis DSM 43247] Length=349 Score = 318 bits (816), Expect = 9e-85, Method: Compositional matrix adjust. Identities = 185/312 (60%), Positives = 233/312 (75%), Gaps = 10/312 (3%) Query 152 PPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPP 211 P GSV++VAA V+PSVV ++ G S EGSGI+LSA+G+I+TNNHV++A P Sbjct 41 PAGSVQEVAANVLPSVVSIDVTEGSTSGEGSGIVLSADGIIMTNNHVVSAGGS----RPA 96 Query 212 PKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSP 271 + TV FSDG AP V+GADP SDIAV++V + L PI++G+S++L VGQ V+AIGSP Sbjct 97 SQVTVDFSDGSRAPARVLGADPISDIAVIKVN-RTDLKPINIGTSANLAVGQNVIAIGSP 155 Query 272 LGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGV 331 LGL GTVTTGI+SALNRPVST+ E+G +V+DAIQTDAAINPGNSGGALVN L+GV Sbjct 156 LGLAGTVTTGIISALNRPVSTSRESG-TTSVIDAIQTDAAINPGNSGGALVNARGSLIGV 214 Query 332 NSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQV--TNDKDT 389 N+AIATLG S Q+GSIGLGFAIP+DQA R+A++L TGKA+HA +GV V D D+ Sbjct 215 NTAIATLGG-SEQQQTGSIGLGFAIPIDQAIRVANQLKDTGKATHAGIGVTVRPNADADS 273 Query 390 LGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPS 449 GA + +V GG AA AG+PKG ++TKVD+R I S DALVAA+RS APG V +T+ Sbjct 274 PGALVNDVTPGGPAAQAGIPKGAIITKVDNRVITSGDALVAAIRSYAPGDRVNVTYS-YQ 332 Query 450 GGSRTVQVTLGK 461 G S+TV VTL + Sbjct 333 GQSKTVPVTLSE 344 >gi|343925200|ref|ZP_08764727.1| putative S1 family peptidase [Gordonia alkanivorans NBRC 16433] gi|343764797|dbj|GAA11653.1| putative S1 family peptidase [Gordonia alkanivorans NBRC 16433] Length=566 Score = 312 bits (800), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 184/315 (59%), Positives = 231/315 (74%), Gaps = 10/315 (3%) Query 152 PPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPP 211 P GSV++VAA+V+PSVV +E G GSG++L+ +G+I+TNNHV++A P Sbjct 257 PAGSVQEVAARVLPSVVSIEVASGGALGSGSGVVLTEDGVIMTNNHVVSAGGN----GPA 312 Query 212 PKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSP 271 + V FSDG A V+GADP SDIAV++V + LTP+++G+S++L VGQ V+AIGSP Sbjct 313 ARVAVNFSDGSRAQARVLGADPISDIAVIKVD-RNDLTPVTVGNSNNLAVGQDVIAIGSP 371 Query 272 LGLEGTVTTGIVSALNRPVSTTGEAG-NQNTVLDAIQTDAAINPGNSGGALVNMNAQLVG 330 LGL GTVTTGI+SALNRPV T+ + G N +V+DAIQTDAAINPGNSGGALVN LVG Sbjct 372 LGLAGTVTTGIISALNRPVLTSRDPGTNTTSVIDAIQTDAAINPGNSGGALVNARGALVG 431 Query 331 VNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQV--TNDKD 388 +N+AIATLG A GSIGLGFAIP+DQA R+A +L STG+ASHA++GV V + D D Sbjct 432 INTAIATLGGGEEQA-GGSIGLGFAIPIDQAIRVAKQLESTGRASHANIGVSVRPSGDSD 490 Query 389 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDP 448 T GA + +V GG AA AG+PK V+TKVDDRPI S DALVAA+RS APG TV +T+ D Sbjct 491 TPGAVVTDVTPGGPAATAGIPKNAVITKVDDRPIASGDALVAAIRSHAPGDTVTVTYSD- 549 Query 449 SGGSRTVQVTLGKAE 463 G S+T QV LG E Sbjct 550 GGNSKTAQVKLGTLE 564 >gi|54026936|ref|YP_121178.1| putative protease [Nocardia farcinica IFM 10152] gi|54018444|dbj|BAD59814.1| putative protease [Nocardia farcinica IFM 10152] Length=415 Score = 309 bits (792), Expect = 6e-82, Method: Compositional matrix adjust. Identities = 187/318 (59%), Positives = 240/318 (76%), Gaps = 16/318 (5%) Query 149 ANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLG 208 +N P GS + VA KV+PSVVM++ R EGSG++LS++GLILTNNHV + G Sbjct 98 SNAPAGSTQAVAQKVLPSVVMIKVASNRAEGEGSGVVLSSDGLILTNNHVASG------G 151 Query 209 SPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAI 268 + V F+DG TAP TVVGADP SD+AV++ QG + LTPI LG+S+ L+VGQPV+AI Sbjct 152 GTGARMEVHFADGSTAPATVVGADPVSDLAVIKAQGRTDLTPIELGTSASLQVGQPVIAI 211 Query 269 GSPLGLEGTVTTGIVSALNRPVSTTGEAGNQN-----TVLDAIQTDAAINPGNSGGALVN 323 GSPLGL GTVTTGIVSALNRPVST+GE G QN V+DAIQTDAAINPGNSGGALV+ Sbjct 212 GSPLGLAGTVTTGIVSALNRPVSTSGE-GTQNPNAPQPVIDAIQTDAAINPGNSGGALVD 270 Query 324 MNAQLVGVNSAIATLGA-DSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQ 382 +L+G+N+AIATLGA + QSGSIGLGFAIPVDQA+R+ADELI TG+A++A +G++ Sbjct 271 YEGKLIGINTAIATLGAGELGGQQSGSIGLGFAIPVDQARRVADELIKTGQATYAQIGIK 330 Query 383 VTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVA 442 + +DT A ++E GG AA AG+P G ++TK+DDR I+S +AL+AAVRS PG V Sbjct 331 L-RPQDT-AALVLEATPGGPAAAAGIPAGAIITKLDDRVIDSGEALIAAVRSHQPGDKVK 388 Query 443 LTFQDPSGGS-RTVQVTL 459 +T+ D +G + +TV+VTL Sbjct 389 VTYTDENGNNPKTVEVTL 406 >gi|256374769|ref|YP_003098429.1| peptidase S1 and S6 chymotrypsin/Hap [Actinosynnema mirum DSM 43827] gi|255919072|gb|ACU34583.1| peptidase S1 and S6 chymotrypsin/Hap [Actinosynnema mirum DSM 43827] Length=674 Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 181/335 (55%), Positives = 233/335 (70%), Gaps = 18/335 (5%) Query 131 AGPSGGPVAA--SAAPSIPAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSA 188 AG SG V A +A P+ A+ P GSVE VA KV+P+VV ++ G GSG ++S+ Sbjct 352 AGGSGSVVNALNAAPPAQQTADAPAGSVEAVAQKVLPTVVQVQVSGG----AGSGFVISS 407 Query 189 EGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGL 248 +GL++TNNHV+ +AA+ V F DGRTA ++G DP+SD+AV++ GVSGL Sbjct 408 DGLVVTNNHVVESAARGGA------VRVVFQDGRTASAKIIGRDPSSDLAVIKADGVSGL 461 Query 249 TPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQT 308 LG+SSDL++GQ V+A+GSP L GTVT+GIVS+LNRPV GE+G+Q+TVL+A+QT Sbjct 462 PTAELGNSSDLKIGQQVIAVGSPFDLTGTVTSGIVSSLNRPVRAGGESGSQSTVLNAVQT 521 Query 309 DAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADEL 368 DAAINPGNSGG L++MN +++G+NSAI + + S +Q GS+G+GFAIP+DQA+R A EL Sbjct 522 DAAINPGNSGGPLIDMNGRVIGINSAIYSPNS-SQTSQGGSVGIGFAIPIDQARRTATEL 580 Query 369 ISTGKASHASLGVQVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADAL 428 TGKA+ LGVQVT D GA + EV GGAA AGV G VVTK DR I+S+DAL Sbjct 581 SETGKATQTVLGVQVT-DAPQGGAAVQEVTEGGAAGQAGVKAGDVVTKFGDRRIDSSDAL 639 Query 429 VAAVRSKAPGATVALTFQDPSGGSRTVQVTLGKAE 463 VAAVRS PG V LT D RTV+VTLG E Sbjct 640 VAAVRSDTPGDKVTLTLAD----GRTVEVTLGSQE 670 >gi|319950657|ref|ZP_08024560.1| serine peptidase [Dietzia cinnamea P4] gi|319435674|gb|EFV90891.1| serine peptidase [Dietzia cinnamea P4] Length=382 Score = 306 bits (784), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 188/375 (51%), Positives = 247/375 (66%), Gaps = 17/375 (4%) Query 90 PGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAA 149 PG + G++ G V +VS G+GG + V AG SG +++ + + P Sbjct 24 PGSASNKSGRGLVVAGIVAAMLVSGGLGGWIGATV------AGGSGEGLSSPISATQPVG 77 Query 150 NMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGS 209 P G+VE VA KV+PSVV ++ EGSG++L+A+GLI+TNNHVIA A S Sbjct 78 QAPDGTVEAVADKVLPSVVSIDVRSQTGRGEGSGVVLTADGLIITNNHVIAMA------S 131 Query 210 PPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIG 269 V F DG AP ++VG DP +DIAV++ + LTP++LG+S++L GQ V AIG Sbjct 132 AGGSIQVRFDDGSKAPASIVGTDPATDIAVIKAEAPRPLTPVALGTSANLNEGQAVAAIG 191 Query 270 SPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLV 329 SPLGL GTVTTGIVSAL RPV G +Q+TV+DAIQTDAA+NPGNSGGALVNMN +L+ Sbjct 192 SPLGLSGTVTTGIVSALERPVRAGGAQSDQSTVIDAIQTDAAVNPGNSGGALVNMNGELI 251 Query 330 GVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDT 389 G+NSAIA+LG+ SGSIGLGFAIPVDQA+RIAD++I G A+ A LGV V++ Sbjct 252 GINSAIASLGS----GNSGSIGLGFAIPVDQARRIADQIIKQGFATRAVLGVTVSDSPAG 307 Query 390 LGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPS 449 GA + V GG A AG+ +G +VT+V +R I + DALVAA+RS+APG TV++T+ Sbjct 308 DGALVRSVEPGGPADRAGIEEGAIVTRVGERLIENGDALVAAIRSRAPGETVSVTYASRE 367 Query 450 GG-SRTVQVTLGKAE 463 G TV V LG+A Sbjct 368 GEPPNTVDVALGEAR 382 >gi|296140965|ref|YP_003648208.1| peptidase S1 and S6 chymotrypsin/Hap [Tsukamurella paurometabola DSM 20162] gi|296029099|gb|ADG79869.1| peptidase S1 and S6 chymotrypsin/Hap [Tsukamurella paurometabola DSM 20162] Length=420 Score = 304 bits (778), Expect = 3e-80, Method: Compositional matrix adjust. Identities = 209/443 (48%), Positives = 271/443 (62%), Gaps = 34/443 (7%) Query 29 PQQPGTPGYAQGQQQTYSQQFDWRYPPSPPPQPTQYR--QPYEALGGTRPGLIPGVIPTM 86 PQ P PG G Q Y Q + PS P QP YR Q G +PG V P Sbjct 5 PQNPYQPGNPPGGQSGYPGQQPGQ--PSVPGQPPTYRPTQQLPGYGPAQPGGPVAVAPNR 62 Query 87 TPPPGMVRQRPRAGMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSI 146 P RP G L V IA+V++ + A LV GG + +++P Sbjct 63 AP------SRPGVGALTAIGVAIALVASLLSVTGAYLV---------WGGDSSKASSPVS 107 Query 147 PAANMPPGSVEQVAAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPP 206 +A P GSV++VA V+PSVV ++ GSG+++SA+G I+TNNHVIA Sbjct 108 NSAPAPKGSVQEVAQTVLPSVVSIDNRAATSESSGSGVVISADGKIVTNNHVIAGNGA-- 165 Query 207 LGSPPPKTTVTFSDGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVL 266 TVTFSDG T+ +VGADP +D+AV+RV+ GL PI+ G S L VGQ V+ Sbjct 166 -------LTVTFSDGSTSSADLVGADPVTDLAVIRVR-KGGLKPITFGDSGKLAVGQDVV 217 Query 267 AIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNA 326 A+G+PLGL GTVT+GIVSALNRPV+T+G +Q TV++++QTDAAINPGNSGGALV+M Sbjct 218 AVGAPLGLAGTVTSGIVSALNRPVATSGRDSDQATVVNSVQTDAAINPGNSGGALVDMQG 277 Query 327 QLVGVNSAIATLGADSADA-QSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTN 385 QLVGVNSAIA+LG+ A QSGSIGLGFAIP D KRI +ELI+TG+A+HA++GVQV+ Sbjct 278 QLVGVNSAIASLGSSRAGGQQSGSIGLGFAIPSDLVKRITNELITTGQATHAAVGVQVSP 337 Query 386 DKDTL---GAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVA 442 + + GA I V GA AG+P+G VTK+D I+ L+ AVRS +PGATV Sbjct 338 GQTSAAEPGAVIGAVSPTGAFGRAGIPEGSRVTKIDSLQISDGIGLMGAVRSYSPGATVT 397 Query 443 LTFQDP-SGGSRTVQVTLGKAEQ 464 +T+ P S + T QVTL K ++ Sbjct 398 ITYVAPGSSSAATKQVTLDKLDR 420 >gi|213966077|ref|ZP_03394265.1| protease do [Corynebacterium amycolatum SK46] gi|213951275|gb|EEB62669.1| protease do [Corynebacterium amycolatum SK46] Length=439 Score = 303 bits (776), Expect = 4e-80, Method: Compositional matrix adjust. Identities = 186/365 (51%), Positives = 241/365 (67%), Gaps = 12/365 (3%) Query 100 GMLAIGAVTIAVVSAGIGGAAASLVGFNRAPAGPSGGPVAASAAPSIPAANMPPGSVEQV 159 GM A+ + + SAGIGG + V N + P+ + A AA GSVE+V Sbjct 85 GMGALAVAALMLCSAGIGGGVGAWVVHNSQSSAPADNALDKPAETRQVAA--AEGSVEKV 142 Query 160 AAKVVPSVVMLETDLGRQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFS 219 A KV+PSVV + T R + GSG ILS++GL+LTNNHV+A A P V S Sbjct 143 AQKVLPSVVSITTASERGTASGSGSILSSDGLVLTNNHVVAGAG------PDAHMEVLLS 196 Query 220 DGRTAPFTVVGADPTSDIAVVRVQGVSGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVT 279 DG T P T+V D +DIAV+R++GV+GL PISLG+SS ++VGQ V+A+GSPLGL TVT Sbjct 197 DGTTHPATLVAGDAATDIAVIRIEGVNGLRPISLGNSSQVQVGQEVVAVGSPLGLTSTVT 256 Query 280 TGIVSALNRPVSTTGEAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLG 339 GIVSA NRPV+ GE G Q++V+DAIQTDAAINPGNSGGALV+M L+GV S IA+ Sbjct 257 QGIVSAKNRPVTAAGEDG-QSSVIDAIQTDAAINPGNSGGALVDMEGNLIGVPSVIAS-- 313 Query 340 ADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGVQVTNDKDTLGAKIVEVVA 399 A Q+GSIGLGFAIPV+QA+RIA++LI +GKA +G Q+ + GA + EV Sbjct 314 NSEASEQAGSIGLGFAIPVNQARRIAEDLIDSGKARMPVIGAQIDSRPIARGALVREVTP 373 Query 400 GGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGS-RTVQVT 458 GG A AG+ G ++TKVDDR +++ AL+AA+RS G +V LT D GG+ RTV VT Sbjct 374 GGPADKAGLKDGDLITKVDDRTLDNGVALIAAIRSHRIGDSVTLTVTDERGGNERTVDVT 433 Query 459 LGKAE 463 L +A+ Sbjct 434 LAEAQ 438 Lambda K H 0.311 0.130 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 976493849394 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40