BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv0985c
Length=151
Score E
Sequences producing significant alignments: (Bits) Value
gi|126031453|pdb|2OAR|A Chain A, Mechanosensitive Channel Of Lar... 302 1e-80
gi|289555233|ref|ZP_06444443.1| large-conductance ion mechanosen... 299 8e-80
gi|15608125|ref|NP_215500.1| large-conductance mechanosensitive ... 299 9e-80
gi|340625997|ref|YP_004744449.1| putative large-conductance ion ... 297 3e-79
gi|121636912|ref|YP_977135.1| large-conductance mechanosensitive... 296 7e-79
gi|294996476|ref|ZP_06802167.1| large-conductance mechanosensiti... 247 4e-64
gi|296169795|ref|ZP_06851410.1| large conductance mechanosensiti... 246 8e-64
gi|118619768|ref|YP_908100.1| large-conductance mechanosensitive... 236 1e-60
gi|240169344|ref|ZP_04748003.1| large-conductance mechanosensiti... 231 4e-59
gi|41407018|ref|NP_959854.1| large-conductance mechanosensitive ... 230 6e-59
gi|342860583|ref|ZP_08717234.1| large-conductance mechanosensiti... 206 8e-52
gi|15826991|ref|NP_301254.1| large-conductance mechanosensitive ... 205 1e-51
gi|118468275|ref|YP_889720.1| large-conductance mechanosensitive... 170 7e-41
gi|126437237|ref|YP_001072928.1| large-conductance mechanosensit... 160 5e-38
gi|108801258|ref|YP_641455.1| large-conductance mechanosensitive... 157 4e-37
gi|256595528|gb|ACV04418.1| putative mechanosensitive channel [M... 157 5e-37
gi|169628177|ref|YP_001701826.1| large-conductance mechanosensit... 157 6e-37
gi|120405788|ref|YP_955617.1| large-conductance mechanosensitive... 145 1e-33
gi|331694665|ref|YP_004330904.1| large conductance mechanosensit... 125 1e-27
gi|306835634|ref|ZP_07468643.1| large conductance mechanosensiti... 121 3e-26
gi|227504187|ref|ZP_03934236.1| MscL family large conductance me... 120 6e-26
gi|227501474|ref|ZP_03931523.1| MscL family large conductance me... 120 7e-26
gi|300781681|ref|ZP_07091535.1| large conductance mechanosensiti... 118 3e-25
gi|302530358|ref|ZP_07282700.1| large conductance mechanosensiti... 117 6e-25
gi|213966061|ref|ZP_03394249.1| large conductance mechanosensiti... 117 8e-25
gi|343925207|ref|ZP_08764734.1| large-conductance mechanosensiti... 116 1e-24
gi|311740869|ref|ZP_07714696.1| large conductance mechanosensiti... 115 3e-24
gi|262201375|ref|YP_003272583.1| large conductance mechanosensit... 115 3e-24
gi|255325460|ref|ZP_05366564.1| large conductance mechanosensiti... 113 8e-24
gi|19552104|ref|NP_600106.1| large-conductance mechanosensitive ... 113 1e-23
gi|300858082|ref|YP_003783065.1| large-conductance mechanosensit... 112 2e-23
gi|340795031|ref|YP_004760494.1| Large-conductance mechanosensit... 112 2e-23
gi|296118261|ref|ZP_06836842.1| large conductance mechanosensiti... 112 2e-23
gi|145222482|ref|YP_001133160.1| large-conductance mechanosensit... 112 3e-23
gi|54026931|ref|YP_121173.1| putative mechanosensitive channel [... 111 3e-23
gi|145295049|ref|YP_001137870.1| hypothetical protein cgR_0992 [... 110 8e-23
gi|25027509|ref|NP_737563.1| putative large-conductance mechanos... 108 2e-22
gi|38233456|ref|NP_939223.1| large-conductance mechanosensitive ... 108 2e-22
gi|256374773|ref|YP_003098433.1| large conductance mechanosensit... 108 2e-22
gi|68536613|ref|YP_251318.1| hypothetical protein jk1527 [Coryne... 108 3e-22
gi|269796339|ref|YP_003315794.1| large conductance mechanosensit... 107 6e-22
gi|300790123|ref|YP_003770414.1| large conductance mechanosensit... 107 6e-22
gi|337290331|ref|YP_004629352.1| Large-conductance mechanosensit... 107 8e-22
gi|225023054|ref|ZP_03712246.1| hypothetical protein CORMATOL_03... 107 9e-22
gi|148273633|ref|YP_001223194.1| putative large-conductance mech... 106 1e-21
gi|227832658|ref|YP_002834365.1| transport protein of the large ... 106 1e-21
gi|334564604|ref|ZP_08517595.1| large conductance mechanosensiti... 106 1e-21
gi|305681864|ref|ZP_07404668.1| large conductance mechanosensiti... 105 2e-21
gi|237785102|ref|YP_002905807.1| large conductance mechanosensit... 104 5e-21
gi|184200296|ref|YP_001854503.1| large-conductance mechanosensit... 103 8e-21
>gi|126031453|pdb|2OAR|A Chain A, Mechanosensitive Channel Of Large Conductance (Mscl)
gi|126031454|pdb|2OAR|B Chain B, Mechanosensitive Channel Of Large Conductance (Mscl)
gi|126031455|pdb|2OAR|C Chain C, Mechanosensitive Channel Of Large Conductance (Mscl)
gi|126031456|pdb|2OAR|D Chain D, Mechanosensitive Channel Of Large Conductance (Mscl)
gi|126031457|pdb|2OAR|E Chain E, Mechanosensitive Channel Of Large Conductance (Mscl)
Length=174
Score = 302 bits (773), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG
Sbjct 24 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 83
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL
Sbjct 84 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 143
Query 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
Sbjct 144 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 174
>gi|289555233|ref|ZP_06444443.1| large-conductance ion mechanosensitive channel mscL [Mycobacterium
tuberculosis KZN 605]
gi|289439865|gb|EFD22358.1| large-conductance ion mechanosensitive channel mscL [Mycobacterium
tuberculosis KZN 605]
Length=157
Score = 299 bits (766), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG
Sbjct 7 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 66
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL
Sbjct 67 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 126
Query 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
Sbjct 127 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 157
>gi|15608125|ref|NP_215500.1| large-conductance mechanosensitive channel [Mycobacterium tuberculosis
H37Rv]
gi|15840410|ref|NP_335447.1| large-conductance mechanosensitive channel [Mycobacterium tuberculosis
CDC1551]
gi|31792175|ref|NP_854668.1| large-conductance mechanosensitive channel [Mycobacterium bovis
AF2122/97]
73 more sequence titles
Length=151
Score = 299 bits (766), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG
Sbjct 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL
Sbjct 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
Query 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ
Sbjct 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
>gi|340625997|ref|YP_004744449.1| putative large-conductance ion mechanosensitive channel MSCL
[Mycobacterium canettii CIPT 140010059]
gi|340004187|emb|CCC43327.1| putative large-conductance ion mechanosensitive channel MSCL
[Mycobacterium canettii CIPT 140010059]
Length=151
Score = 297 bits (761), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 151/151 (100%), Gaps = 0/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG
Sbjct 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL
Sbjct 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
Query 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
LAQT+GDSPGRHGGRGTPSPTDGPRASTESQ
Sbjct 121 LAQTSGDSPGRHGGRGTPSPTDGPRASTESQ 151
>gi|121636912|ref|YP_977135.1| large-conductance mechanosensitive channel [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224989384|ref|YP_002644071.1| large-conductance mechanosensitive channel [Mycobacterium bovis
BCG str. Tokyo 172]
gi|166221414|sp|A1KHC1.1|MSCL_MYCBP RecName: Full=Large-conductance mechanosensitive channel
gi|254813319|sp|C1ALX4.1|MSCL_MYCBT RecName: Full=Large-conductance mechanosensitive channel
gi|121492559|emb|CAL71027.1| Possible large-conductance ion mechanosensitive channel mscL
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224772497|dbj|BAH25303.1| large-conductance mechanosensitive channel [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341600928|emb|CCC63599.1| possible large-conductance ion mechanosensitive channel mscL
[Mycobacterium bovis BCG str. Moreau RDJ]
Length=151
Score = 296 bits (758), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 150/151 (99%), Positives = 150/151 (99%), Gaps = 0/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG
Sbjct 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL
Sbjct 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
Query 121 LAQTNGDSPGRHGGRGTPSPTDGPRASTESQ 151
LAQTNGDSPGRHGGRGTPSPTDGP ASTESQ
Sbjct 121 LAQTNGDSPGRHGGRGTPSPTDGPLASTESQ 151
>gi|294996476|ref|ZP_06802167.1| large-conductance mechanosensitive channel [Mycobacterium tuberculosis
210]
Length=124
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/124 (100%), Positives = 124/124 (100%), Gaps = 0/124 (0%)
Query 28 TALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVY 87
TALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVY
Sbjct 1 TALVTKFTDSIITPLINRIGVNAQSDVGILRIGIGGGQTIDLNVLLSAAINFFLIAFAVY 60
Query 88 FLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRAS 147
FLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRAS
Sbjct 61 FLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRAS 120
Query 148 TESQ 151
TESQ
Sbjct 121 TESQ 124
>gi|296169795|ref|ZP_06851410.1| large conductance mechanosensitive channel [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895589|gb|EFG75288.1| large conductance mechanosensitive channel [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=152
Score = 246 bits (628), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 125/152 (83%), Positives = 134/152 (89%), Gaps = 1/152 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
M KGFKEFL+RGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGV QS+VG+L+IG
Sbjct 1 MFKGFKEFLSRGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVKQQSNVGVLKIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLN+LLSAAINF LIA VYF VVLPYNTLRK+GEVEQ D Q+VLLTEIRDL
Sbjct 61 IGGGQTIDLNILLSAAINFVLIAAVVYFFVVLPYNTLRKRGEVEQADDAQIVLLTEIRDL 120
Query 121 LAQTNGDSPGRHGGRG-TPSPTDGPRASTESQ 151
LA+TNGDS G+HGG G TP P GPRA ESQ
Sbjct 121 LAETNGDSSGKHGGPGTTPPPDHGPRADAESQ 152
>gi|118619768|ref|YP_908100.1| large-conductance mechanosensitive channel [Mycobacterium ulcerans
Agy99]
gi|183984495|ref|YP_001852786.1| large-conductance ion mechanosensitive channel MscL [Mycobacterium
marinum M]
gi|166221415|sp|A0PWB0.1|MSCL_MYCUA RecName: Full=Large-conductance mechanosensitive channel
gi|229486128|sp|B2HEA6.1|MSCL_MYCMM RecName: Full=Large-conductance mechanosensitive channel
gi|118571878|gb|ABL06629.1| large-conductance ion mechanosensitive channel MscL [Mycobacterium
ulcerans Agy99]
gi|183177821|gb|ACC42931.1| large-conductance ion mechanosensitive channel MscL [Mycobacterium
marinum M]
Length=151
Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/151 (81%), Positives = 131/151 (87%), Gaps = 3/151 (1%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFL+RGNIVDLAVAVVIGTAFTALVT+FTDSIITPLINR+GVN QSD+GIL+IG
Sbjct 1 MLKGFKEFLSRGNIVDLAVAVVIGTAFTALVTRFTDSIITPLINRVGVNEQSDLGILKIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IG GQ+IDLNVLLSA INF L+A VYFLVV+PYNTLRKKGEVEQ D Q+VLLTEIRDL
Sbjct 61 IGRGQSIDLNVLLSATINFILVAGVVYFLVVVPYNTLRKKGEVEQADDAQIVLLTEIRDL 120
Query 121 LAQTNGDSPGRH---GGRGTPSPTDGPRAST 148
LAQTN +S GRH G GTP P GPRA T
Sbjct 121 LAQTNSNSSGRHEAPGTAGTPPPNYGPRADT 151
>gi|240169344|ref|ZP_04748003.1| large-conductance mechanosensitive channel [Mycobacterium kansasii
ATCC 12478]
Length=152
Score = 231 bits (588), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 119/152 (79%), Positives = 129/152 (85%), Gaps = 4/152 (2%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLI R+GVN Q+ GILR+
Sbjct 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLITRVGVNQQTSFGILRLD 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQ IDLN+L+SAAINF LIA VYFL+VLPYN LR+KGEVEQ D QVVLLTEIRDL
Sbjct 61 IGGGQAIDLNILVSAAINFVLIAAVVYFLIVLPYNRLRRKGEVEQADDAQVVLLTEIRDL 120
Query 121 LAQTNGDSP-GRHGGRG---TPSPTDGPRAST 148
LAQTNG+SP G+HGG +P P GPRA T
Sbjct 121 LAQTNGESPSGKHGGTAAAVSPPPNHGPRADT 152
>gi|41407018|ref|NP_959854.1| large-conductance mechanosensitive channel [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|118463897|ref|YP_880351.1| large-conductance mechanosensitive channel [Mycobacterium avium
104]
gi|254773978|ref|ZP_05215494.1| large-conductance mechanosensitive channel [Mycobacterium avium
subsp. avium ATCC 25291]
gi|41395369|gb|AAS03237.1| MscL [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118165184|gb|ABK66081.1| large conductance mechanosensitive channel protein [Mycobacterium
avium 104]
gi|336461406|gb|EGO40277.1| large conductance mechanosensitive channel protein [Mycobacterium
avium subsp. paratuberculosis S397]
Length=151
Score = 230 bits (586), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 118/151 (79%), Positives = 127/151 (85%), Gaps = 1/151 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFL+RGNI+DL+ AVVIGTAFTALVT FTDSII PLINRIGVN +SD+GILRI
Sbjct 1 MLKGFKEFLSRGNIIDLSTAVVIGTAFTALVTTFTDSIIKPLINRIGVNQKSDIGILRIS 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLN +LSAAINF +IA VYFLVVLPY TLRK+GEVE D QVVLLTEIRDL
Sbjct 61 IGGGQTIDLNNVLSAAINFVIIAAVVYFLVVLPYTTLRKRGEVEPADDAQVVLLTEIRDL 120
Query 121 LAQTNGDSPGRHGG-RGTPSPTDGPRASTES 150
LAQTNGDS G+HG TP P GPRA ES
Sbjct 121 LAQTNGDSSGKHGSVSTTPPPEYGPRAEAES 151
>gi|342860583|ref|ZP_08717234.1| large-conductance mechanosensitive channel [Mycobacterium colombiense
CECT 3035]
gi|342132238|gb|EGT85479.1| large-conductance mechanosensitive channel [Mycobacterium colombiense
CECT 3035]
Length=152
Score = 206 bits (524), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/152 (77%), Positives = 128/152 (85%), Gaps = 1/152 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFL+RGNI+DL+ AVVIGTAFTALVT+FTD+II PLINRIGVN QS+ GILRIG
Sbjct 1 MLKGFKEFLSRGNIIDLSTAVVIGTAFTALVTQFTDNIIKPLINRIGVNQQSNFGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQ IDLN +LSAAINF +IA VYFLVVLPY TLRK+GEVE D QVVLL EIRDL
Sbjct 61 IGGGQAIDLNNVLSAAINFVIIAAVVYFLVVLPYTTLRKRGEVEPADDAQVVLLKEIRDL 120
Query 121 LAQTNGDSPGRHGG-RGTPSPTDGPRASTESQ 151
LAQTNGDS G+HGG TP P GPRA ES+
Sbjct 121 LAQTNGDSSGKHGGVSTTPPPEHGPRAEAESK 152
>gi|15826991|ref|NP_301254.1| large-conductance mechanosensitive channel [Mycobacterium leprae
TN]
gi|221229469|ref|YP_002502885.1| large-conductance mechanosensitive channel [Mycobacterium leprae
Br4923]
gi|7674135|sp|Q9Z5G4.1|MSCL_MYCLE RecName: Full=Large-conductance mechanosensitive channel
gi|254813320|sp|B8ZU13.1|MSCL_MYCLB RecName: Full=Large-conductance mechanosensitive channel
gi|4455707|emb|CAB36692.1| putative gated mechanosensitive ion channel [Mycobacterium leprae]
gi|13092538|emb|CAC29686.1| putative mechanosensitive channel protein [Mycobacterium leprae]
gi|219932576|emb|CAR70271.1| putative mechanosensitive channel protein [Mycobacterium leprae
Br4923]
Length=154
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 110/155 (71%), Positives = 122/155 (79%), Gaps = 8/155 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
M +GFKEFL+RGNIVDLAVAVVIGTAFTAL+TKFTDSIITPLINR+GVN Q+++ LRI
Sbjct 1 MFRGFKEFLSRGNIVDLAVAVVIGTAFTALITKFTDSIITPLINRVGVNQQTNISPLRID 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDT-----QVVLLT 115
IGG Q IDLN++LSAAINF LIA VYFLVVLPY T+RK GEVEQ DT QVVLL
Sbjct 61 IGGDQAIDLNIVLSAAINFLLIALVVYFLVVLPYTTIRKHGEVEQ-FDTDLIGNQVVLLA 119
Query 116 EIRDLLAQTNGDSPGRHGGRG--TPSPTDGPRAST 148
EIRDLLAQ+NG GRH TP+P PRA T
Sbjct 120 EIRDLLAQSNGAPSGRHVDTADLTPTPNHEPRADT 154
>gi|118468275|ref|YP_889720.1| large-conductance mechanosensitive channel [Mycobacterium smegmatis
str. MC2 155]
gi|118169562|gb|ABK70458.1| large conductance mechanosensitive channel protein [Mycobacterium
smegmatis str. MC2 155]
Length=156
Score = 170 bits (430), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/156 (58%), Positives = 116/156 (75%), Gaps = 9/156 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFL+RGN++DLAVAVVIG AFT LVT FT+ +I PLI+RIG + + GIL+I
Sbjct 1 MLKGFKEFLSRGNVIDLAVAVVIGAAFTGLVTAFTEKVIQPLIDRIGAGGEREYGILKIP 60
Query 61 IGGG--QTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIR 118
+GG Q +DLN +LSAAINF ++A +YF+++LPY LR++GEVEQ DT++ +LTEIR
Sbjct 61 LGGDPEQFVDLNAVLSAAINFLIVAAVLYFVIMLPYKKLRERGEVEQAQDTELSILTEIR 120
Query 119 DLLAQTNGDSPGRH-GGRGT-PSP-----TDGPRAS 147
DLLA+ + S G+H G GT PSP T G R S
Sbjct 121 DLLAENSNGSTGKHVSGPGTGPSPDTATYTSGDRTS 156
>gi|126437237|ref|YP_001072928.1| large-conductance mechanosensitive channel [Mycobacterium sp.
JLS]
gi|126237037|gb|ABO00438.1| large conductance mechanosensitive channel protein [Mycobacterium
sp. JLS]
Length=151
Score = 160 bits (406), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/152 (63%), Positives = 120/152 (79%), Gaps = 2/152 (1%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNI+DLA AVVIGTAFT LVT FT+++I PLINRIG +++ GILRIG
Sbjct 1 MLKGFKEFLARGNIIDLATAVVIGTAFTGLVTAFTNAVIEPLINRIGAGGEAEYGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQTIDLN++LSA INF LIA VYF++++PY LR++G+VEQ DT++ LLTEIR++
Sbjct 61 IGGGQTIDLNLVLSAIINFLLIAAVVYFVILMPYKKLRERGKVEQAQDTELSLLTEIRNI 120
Query 121 LAQTNGDSPGRHGGRGT-PSPTDGPRASTESQ 151
LA T+G +P + G GT PSP S + +
Sbjct 121 LADTSG-TPRQVTGPGTGPSPDTAETTSADRR 151
>gi|108801258|ref|YP_641455.1| large-conductance mechanosensitive channel [Mycobacterium sp.
MCS]
gi|119870409|ref|YP_940361.1| large-conductance mechanosensitive channel [Mycobacterium sp.
KMS]
gi|108771677|gb|ABG10399.1| large conductance mechanosensitive channel protein [Mycobacterium
sp. MCS]
gi|119696498|gb|ABL93571.1| large conductance mechanosensitive channel protein [Mycobacterium
sp. KMS]
Length=151
Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/152 (62%), Positives = 118/152 (78%), Gaps = 2/152 (1%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEFLARGNI+DLA AVVIGTAFT LVT FT+++I PLINRIG ++ GILRIG
Sbjct 1 MLKGFKEFLARGNIIDLATAVVIGTAFTGLVTAFTNAVIEPLINRIGAGGDAEYGILRIG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
IGGGQ IDLN++LSA INF LIA VYF++++PY LR++G+VEQ DT++ LLTEIR++
Sbjct 61 IGGGQAIDLNLVLSAIINFLLIAAVVYFVILMPYKKLRERGKVEQAQDTELSLLTEIRNI 120
Query 121 LAQTNGDSPGRHGGRGT-PSPTDGPRASTESQ 151
LA T+G +P + G GT PSP S + +
Sbjct 121 LADTSG-TPRQVTGPGTGPSPDTAETTSADRR 151
>gi|256595528|gb|ACV04418.1| putative mechanosensitive channel [Mycobacterium chelonae]
Length=131
Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/132 (63%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++FL RGN++DLAVAVVIG AFTALVTKF+D++I PLINRIG SD L++G
Sbjct 1 MLKGFRDFLLRGNVIDLAVAVVIGAAFTALVTKFSDAVIQPLINRIGTGPDSDHPALKVG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR----KKGEVEQPGDTQVVLLTE 116
IGGGQ +D NVL++A INF LIA VYFLVVLPYNT++ K GE E T+ LL E
Sbjct 61 IGGGQYLDFNVLITATINFILIAAVVYFLVVLPYNTIKERLAKSGE-EPAAQTEAELLVE 119
Query 117 IRDLLAQTNGDS 128
IRDLLA+ S
Sbjct 120 IRDLLAEQKKTS 131
>gi|169628177|ref|YP_001701826.1| large-conductance mechanosensitive channel [Mycobacterium abscessus
ATCC 19977]
gi|169240144|emb|CAM61172.1| Hypothetical large-conductance mechanosensitive channel [Mycobacterium
abscessus]
Length=131
Score = 157 bits (396), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/132 (64%), Positives = 99/132 (75%), Gaps = 5/132 (3%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++FL RGN++DLAVAVVIG AFTALVTKF+D+II PLINRIG SD L++G
Sbjct 1 MLKGFRDFLLRGNVIDLAVAVVIGAAFTALVTKFSDAIIQPLINRIGTGPDSDHPALKVG 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR----KKGEVEQPGDTQVVLLTE 116
IGGGQ +D NVL++A INF LIA VYFLVVLPYNT++ K GE E T+ LL E
Sbjct 61 IGGGQYLDFNVLVTATINFVLIAAVVYFLVVLPYNTIKERLAKSGE-EPAAQTEAELLVE 119
Query 117 IRDLLAQTNGDS 128
IRDLLA+ S
Sbjct 120 IRDLLAEQKKAS 131
>gi|120405788|ref|YP_955617.1| large-conductance mechanosensitive channel [Mycobacterium vanbaalenii
PYR-1]
gi|119958606|gb|ABM15611.1| large conductance mechanosensitive channel protein [Mycobacterium
vanbaalenii PYR-1]
Length=144
Score = 145 bits (367), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/143 (54%), Positives = 107/143 (75%), Gaps = 1/143 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEF++RGN++DLAVAVVIG AFT LVT FT+++I PLI+RIG ++ GILRI
Sbjct 1 MLKGFKEFISRGNVIDLAVAVVIGAAFTGLVTAFTENVIQPLIDRIGAGPDAEYGILRIP 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
+GG Q +DLN +LSAA+NF ++A +YF++V+P+ L+++ + + +T++ LLTEIRDL
Sbjct 61 LGGDQFVDLNAVLSAAVNFLIVAAVIYFVIVVPFKKLKERDKKVESTETELTLLTEIRDL 120
Query 121 LAQTNGDSP-GRHGGRGTPSPTD 142
L D+ GRHGG G S D
Sbjct 121 LRDNAADAATGRHGGTGPQSHAD 143
>gi|331694665|ref|YP_004330904.1| large conductance mechanosensitive channel protein [Pseudonocardia
dioxanivorans CB1190]
gi|326949354|gb|AEA23051.1| large conductance mechanosensitive channel protein [Pseudonocardia
dioxanivorans CB1190]
Length=142
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/146 (50%), Positives = 92/146 (64%), Gaps = 10/146 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+VDLAVAVVIG AF +V+ FTD II PL+N I + +GI I
Sbjct 1 MLKGFKDFILRGNVVDLAVAVVIGAAFGVIVSSFTDKIIQPLLNAITPPTATGLGITVIA 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL---RKKGEVEQPGD-TQVVLLTE 116
ID +++AAINF ++A VYF +VLP +L RK+GE P + T V LL E
Sbjct 61 GKPSTYIDFAAVITAAINFLIVAAVVYFAIVLPLKSLKERRKRGEEAGPAEPTDVQLLAE 120
Query 117 IRDLLAQTNGDSPGRHGGRGTPSPTD 142
IRDLLA NG G+H +PTD
Sbjct 121 IRDLLAAQNGTPTGKH------APTD 140
>gi|306835634|ref|ZP_07468643.1| large conductance mechanosensitive channel protein [Corynebacterium
accolens ATCC 49726]
gi|304568478|gb|EFM44034.1| large conductance mechanosensitive channel protein [Corynebacterium
accolens ATCC 49726]
Length=165
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/158 (46%), Positives = 96/158 (61%), Gaps = 8/158 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+V+LA AV+IG+AFTA+VT TDSII P+IN G +A+ D +I
Sbjct 1 MLKGFKDFIMRGNVVELATAVIIGSAFTAIVTSVTDSIIQPIINSFG-SAEVDGLGFQIT 59
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVLL 114
+D +++AAINF +IA VYFL+V+P N L R++G + E P T LL
Sbjct 60 DNKSTLVDFGAVITAAINFLIIATVVYFLIVMPLNKLTEASKRRQGVDPEAPAPTSEELL 119
Query 115 TEIRDLLAQTNGDS-PGRHGGRGTPSPTDGPRASTESQ 151
EIRDLL N D+ G + TD ST S+
Sbjct 120 AEIRDLLQAQNADAVTAADKALGDATATDASENSTASE 157
>gi|227504187|ref|ZP_03934236.1| MscL family large conductance mechanosensitive ion channel [Corynebacterium
striatum ATCC 6940]
gi|227199231|gb|EEI79279.1| MscL family large conductance mechanosensitive ion channel [Corynebacterium
striatum ATCC 6940]
Length=154
Score = 120 bits (301), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/147 (49%), Positives = 94/147 (64%), Gaps = 8/147 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+++LAVAV+IG+AFTA+VT TDS+I PLIN G S +G +I
Sbjct 1 MLKGFKDFILRGNVIELAVAVIIGSAFTAIVTAVTDSLIQPLINSFGSADYSGLG-FQIT 59
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVLL 114
+D +L+AAINF +IA VYFL+V+P N + R++G + E+P T LL
Sbjct 60 DNESTFMDFGAVLTAAINFLIIAAVVYFLIVMPINKITETAKRRQGVDPEEPAPTTEQLL 119
Query 115 TEIRDLL-AQTNGDSPGRHGGRGTPSP 140
TEIRDL+ AQ SP G T P
Sbjct 120 TEIRDLMEAQKVATSPNSVAGDTTVDP 146
>gi|227501474|ref|ZP_03931523.1| MscL family large conductance mechanosensitive ion channel [Corynebacterium
accolens ATCC 49725]
gi|227077499|gb|EEI15462.1| MscL family large conductance mechanosensitive ion channel [Corynebacterium
accolens ATCC 49725]
Length=165
Score = 120 bits (301), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/158 (46%), Positives = 96/158 (61%), Gaps = 8/158 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+V+LA AV+IG+AFTA+VT TDSII P+IN G +A+ D +I
Sbjct 1 MLKGFKDFIMRGNVVELATAVIIGSAFTAIVTSVTDSIIQPIINSFG-SAEVDGLGFQIT 59
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVLL 114
+D +++AAINF +IA VYFL+V+P N L R++G + E P T LL
Sbjct 60 DNKSTLVDFGAVITAAINFLIIAAVVYFLIVMPLNKLTEASKRRQGVDPEAPAPTSEELL 119
Query 115 TEIRDLLAQTNGDS-PGRHGGRGTPSPTDGPRASTESQ 151
EIRDLL N D+ G + TD ST S+
Sbjct 120 AEIRDLLQAQNADAVTAADKALGDATATDAIENSTASE 157
>gi|300781681|ref|ZP_07091535.1| large conductance mechanosensitive channel protein [Corynebacterium
genitalium ATCC 33030]
gi|300533388|gb|EFK54449.1| large conductance mechanosensitive channel protein [Corynebacterium
genitalium ATCC 33030]
Length=147
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/154 (49%), Positives = 94/154 (62%), Gaps = 21/154 (13%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
+L+GFK+F+ RGN++DLAV VVIG AFTA+VT F+++II PLIN +G S +G +
Sbjct 7 VLQGFKDFIMRGNVIDLAVGVVIGAAFTAVVTAFSENIINPLINAVGGADFSPLGFHVLP 66
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG---EVEQPGDTQVV 112
+D L++A INF LIA VYFL+V P N L R+KG E E P T+
Sbjct 67 DNDATFVDFGALITAIINFLLIAAVVYFLIVAPMNKLDAAQKRRKGIDPEAEDP--TEQE 124
Query 113 LLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRA 146
LLTEIRDLLA NG +PTD PRA
Sbjct 125 LLTEIRDLLAGKNGT-----------APTDTPRA 147
>gi|302530358|ref|ZP_07282700.1| large conductance mechanosensitive channel protein [Streptomyces
sp. AA4]
gi|302439253|gb|EFL11069.1| large conductance mechanosensitive channel protein [Streptomyces
sp. AA4]
Length=155
Score = 117 bits (293), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/139 (52%), Positives = 92/139 (67%), Gaps = 7/139 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI-GVNAQSDVGILRI 59
+LKGFK+FL RGN+VDLAVAVVIG AFTA+VT FT+ +I PLIN + G NA +G +
Sbjct 17 VLKGFKDFLMRGNVVDLAVAVVIGAAFTAIVTAFTNGLIKPLINALGGSNAAKGLG-FNV 75
Query 60 GIGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL---RKKGEVEQPGD-TQVVLL 114
G T +D +++AAINF ++A VYFL+VLP + RK+GE P + T V LL
Sbjct 76 RNGNDSTFMDFGGVINAAINFVIVAAIVYFLIVLPMKHIQERRKRGEEPGPAEPTDVELL 135
Query 115 TEIRDLLAQTNGDSPGRHG 133
TEIRDLL G+ P G
Sbjct 136 TEIRDLLRAQQGNGPSSRG 154
>gi|213966061|ref|ZP_03394249.1| large conductance mechanosensitive channel protein [Corynebacterium
amycolatum SK46]
gi|213951259|gb|EEB62653.1| large conductance mechanosensitive channel protein [Corynebacterium
amycolatum SK46]
Length=138
Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/131 (49%), Positives = 85/131 (65%), Gaps = 5/131 (3%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN++DLAV VVIG+AFTA+VT FTDS++ PL+N IG +G I
Sbjct 1 MLKGFKDFIMRGNVIDLAVGVVIGSAFTAIVTAFTDSLLEPLLNTIGGAEVKGLGFEIIS 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVE-----QPGDTQVVLLT 115
+D +++AAINF L+A VYF++V P N + E +P T+ LLT
Sbjct 61 GNPSTYLDFAAVITAAINFLLVAAVVYFVIVAPMNKFNEIREARLETSAEPEVTEADLLT 120
Query 116 EIRDLLAQTNG 126
EIRDLLA+ NG
Sbjct 121 EIRDLLAEQNG 131
>gi|343925207|ref|ZP_08764734.1| large-conductance mechanosensitive channel [Gordonia alkanivorans
NBRC 16433]
gi|343764804|dbj|GAA11660.1| large-conductance mechanosensitive channel [Gordonia alkanivorans
NBRC 16433]
Length=279
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/171 (43%), Positives = 97/171 (57%), Gaps = 26/171 (15%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGI-LRI 59
MLKGFK+F+ +GN+V+LA AV+IG AFTA+VT FTD I+ P+IN I + + G+ +I
Sbjct 1 MLKGFKDFILKGNVVELATAVIIGAAFTAIVTAFTDGIVQPIINSIPIGTDAAQGLGFQI 60
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR------KKGEVEQPGDTQVVL 113
+DL +++A INF +IA VYF+++LPYN L KK EV T+V L
Sbjct 61 TDNASTFVDLGGVITAVINFLIIAAVVYFIIILPYNRLAELGGFGKKSEV-----TEVAL 115
Query 114 LTEIRDLL---------AQTNGDSPGRHGGRGTPS-----PTDGPRASTES 150
LTEIRDLL A+ D P P+ P GP A ES
Sbjct 116 LTEIRDLLDPEGKSKAKAEAESDLPPHLAEPSAPAGDVYTPQSGPLAPYES 166
>gi|311740869|ref|ZP_07714696.1| large conductance mechanosensitive channel protein [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311304389|gb|EFQ80465.1| large conductance mechanosensitive channel protein [Corynebacterium
pseudogenitalium ATCC 33035]
Length=167
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/159 (46%), Positives = 94/159 (60%), Gaps = 14/159 (8%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+++LA AV+IG+AFTA+V TDSII P+IN +G ++VG +
Sbjct 5 MLKGFKDFIMRGNVIELATAVIIGSAFTAIVKSVTDSIIQPIINSLG---SAEVGAVGFH 61
Query 61 IGGGQT--IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVV 112
I + +D ++SAAINF +IA VYFL+V+P N L R+ G + E P T
Sbjct 62 ITDAENTFVDFGAVISAAINFLIIAAVVYFLIVMPINKLTEAAKRRHGVDPEAPAPTSEE 121
Query 113 LLTEIRDLLAQTN---GDSPGRHGGRGTPSPTDGPRAST 148
LL EIRDLL N D PG T TD ST
Sbjct 122 LLAEIRDLLEAQNVSDKDIPGTGIDGSTRGATDADYGST 160
>gi|262201375|ref|YP_003272583.1| large conductance mechanosensitive channel protein [Gordonia
bronchialis DSM 43247]
gi|262084722|gb|ACY20690.1| large conductance mechanosensitive channel protein [Gordonia
bronchialis DSM 43247]
Length=274
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/139 (46%), Positives = 87/139 (63%), Gaps = 12/139 (8%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGI-LRI 59
MLKGF+EF+ +GN+V+LA AV++GTAFTA+VT FT I+ P+IN I V + G+ +I
Sbjct 1 MLKGFREFILKGNVVELATAVIVGTAFTAIVTAFTTGIVEPIINSIPVGTDAAKGLGFQI 60
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR------KKGEVEQPGDTQVVL 113
+D+ +++A INF +IA VYFL+++PYN L KK EV T+V L
Sbjct 61 TDKASTYVDIGAVITAFINFIIIAAVVYFLIIMPYNKLAELGGFGKKSEV-----TEVAL 115
Query 114 LTEIRDLLAQTNGDSPGRH 132
LTEIRDLL + H
Sbjct 116 LTEIRDLLDPEGSSAAKEH 134
>gi|255325460|ref|ZP_05366564.1| large conductance mechanosensitive channel protein [Corynebacterium
tuberculostearicum SK141]
gi|255297546|gb|EET76859.1| large conductance mechanosensitive channel protein [Corynebacterium
tuberculostearicum SK141]
Length=167
Score = 113 bits (283), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 67/141 (48%), Positives = 89/141 (64%), Gaps = 14/141 (9%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+++LA AV+IG+AFTA+V TDSII P+IN +G ++VG +
Sbjct 5 MLKGFKDFIMRGNVIELATAVIIGSAFTAIVKSVTDSIIQPIINSLG---SAEVGAVGFH 61
Query 61 IGGGQT--IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVV 112
I + +D ++SAAINF +IA VYFL+V+P N L R+ G + E P T
Sbjct 62 ITDAENTFVDFGAVISAAINFLIIAAVVYFLIVMPINKLTEAAKRRHGVDPEAPAPTSEE 121
Query 113 LLTEIRDLLAQTN---GDSPG 130
LL EIRDLL N D PG
Sbjct 122 LLAEIRDLLEAQNVSDKDIPG 142
>gi|19552104|ref|NP_600106.1| large-conductance mechanosensitive channel [Corynebacterium glutamicum
ATCC 13032]
gi|62389768|ref|YP_225170.1| large conductance mechanosensitive channel [Corynebacterium glutamicum
ATCC 13032]
gi|21323645|dbj|BAB98272.1| Large-conductance mechanosensitive channel [Corynebacterium glutamicum
ATCC 13032]
gi|41325103|emb|CAF19584.1| LARGE CONDUCTANCE MECHANOSENSITIVE CHANNEL [Corynebacterium glutamicum
ATCC 13032]
Length=135
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/131 (51%), Positives = 87/131 (67%), Gaps = 9/131 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+++LAVAVVIGTAFTA+VT F++SII PLI IG +G I
Sbjct 1 MLKGFRDFVLRGNVIELAVAVVIGTAFTAIVTAFSESIINPLIASIGSTEVEGLG-FHIR 59
Query 61 IGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG--EVEQPGDTQVV 112
G T +D +++AAINF +IA VYF++V P N L ++KG E E P +
Sbjct 60 AGNAATFVDFGAVITAAINFLIIAAIVYFVLVAPMNKLSETLAKRKGVEEDETPASIEAE 119
Query 113 LLTEIRDLLAQ 123
LLTEIRDLL +
Sbjct 120 LLTEIRDLLQE 130
>gi|300858082|ref|YP_003783065.1| large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
FRC41]
gi|300685536|gb|ADK28458.1| Large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
FRC41]
gi|302205805|gb|ADL10147.1| Large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
C231]
gi|302330364|gb|ADL20558.1| Large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
1002]
gi|308276040|gb|ADO25939.1| Large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
I19]
gi|341824478|gb|AEK91999.1| Large-conductance mechanosensitive channel [Corynebacterium pseudotuberculosis
PAT10]
Length=140
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/139 (51%), Positives = 89/139 (65%), Gaps = 15/139 (10%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+V+LAVAVVIGTAFTA+VT FT+ +I PLI +G +DV L
Sbjct 1 MLKGFKDFILRGNVVELAVAVVIGTAFTAIVTAFTNHLINPLIASLG---GADVSGLGFH 57
Query 61 IGGGQT---IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG---EVEQPGDT 109
I G +D +++AAINF +IA VYF++V P N L R+KG E E P
Sbjct 58 IRSGNEATFLDFGAVITAAINFLIIAAVVYFILVAPMNKLNEMAARRKGIQEEKEAPASI 117
Query 110 QVVLLTEIRDLL-AQTNGD 127
+ LL EIRDLL Q NG+
Sbjct 118 EAELLEEIRDLLKTQRNGN 136
>gi|340795031|ref|YP_004760494.1| Large-conductance mechanosensitive channel [Corynebacterium variabile
DSM 44702]
gi|340534941|gb|AEK37421.1| Large-conductance mechanosensitive channel [Corynebacterium variabile
DSM 44702]
Length=156
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/157 (45%), Positives = 91/157 (58%), Gaps = 9/157 (5%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEF+ RGN+++LA V+IG AFTA+VT TD++I PLIN G + RI
Sbjct 1 MLKGFKEFIMRGNVIELATGVIIGAAFTAIVTALTDNLIQPLINVFGGGGDVEGLAWRIK 60
Query 61 IG-GGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVV------- 112
G TIDL ++SA INF +IA VYF++V+P N + + + DT+ V
Sbjct 61 SGDASTTIDLGAIISAVINFLIIAAVVYFIIVMPINRMAEAAAKRKGQDTEEVATASETD 120
Query 113 LLTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTE 149
LL EIRDLLA +G S + SP G R S E
Sbjct 121 LLIEIRDLLASQSGVSTPSNDIPEGESPETG-RHSAE 156
>gi|296118261|ref|ZP_06836842.1| large conductance mechanosensitive channel protein [Corynebacterium
ammoniagenes DSM 20306]
gi|295968819|gb|EFG82063.1| large conductance mechanosensitive channel protein [Corynebacterium
ammoniagenes DSM 20306]
Length=160
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/155 (46%), Positives = 90/155 (59%), Gaps = 12/155 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN++DLAV V+IG AFTA+VT TDS+I P+IN G + +G +I
Sbjct 1 MLKGFKDFIMRGNVIDLAVGVIIGGAFTAIVTALTDSLIQPIINSFGSADMAGLG-FQIT 59
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVLL 114
ID V+++A INF +IA VYF++V P N L R+ G + E P T LL
Sbjct 60 ENENTFIDFGVVITAVINFLIIAGVVYFIIVAPINKLNEINNRRLGVQEEAPAPTSEELL 119
Query 115 TEIRDLLAQTNGDSPGRHG-----GRGTPSPTDGP 144
EIRDL+A G HG R T TD P
Sbjct 120 AEIRDLMAAEANGPTGAHGIDRSTDRSTGGDTDRP 154
>gi|145222482|ref|YP_001133160.1| large-conductance mechanosensitive channel [Mycobacterium gilvum
PYR-GCK]
gi|315442928|ref|YP_004075807.1| large conductance mechanosensitive channel protein [Mycobacterium
sp. Spyr1]
gi|145214968|gb|ABP44372.1| large conductance mechanosensitive channel protein [Mycobacterium
gilvum PYR-GCK]
gi|315261231|gb|ADT97972.1| large conductance mechanosensitive channel protein [Mycobacterium
sp. Spyr1]
Length=147
Score = 112 bits (279), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/127 (52%), Positives = 98/127 (78%), Gaps = 1/127 (0%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFKEF++RGN++DLAVAVV+G AFT LVT FT +++ PL++RIG ++ GIL+I
Sbjct 1 MLKGFKEFISRGNVIDLAVAVVVGAAFTGLVTAFTQNVVQPLVDRIGAGPDAEYGILKIP 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKKGEVEQPGDTQVVLLTEIRDL 120
+G Q +DLN +LSAAINF ++A +YF++V+P+ ++++ +T++ LLTEIRDL
Sbjct 61 LGADQFVDLNAVLSAAINFLIVAAVIYFVIVVPFKKIKERDAKVVSTETELTLLTEIRDL 120
Query 121 L-AQTNG 126
L AQ++G
Sbjct 121 LQAQSSG 127
>gi|54026931|ref|YP_121173.1| putative mechanosensitive channel [Nocardia farcinica IFM 10152]
gi|54018439|dbj|BAD59809.1| putative mechanosensitive channel [Nocardia farcinica IFM 10152]
Length=135
Score = 111 bits (278), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/135 (49%), Positives = 89/135 (66%), Gaps = 5/135 (3%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+FL RGN+VDLAVAVVIGTAF A+VT FT+ II PL+ G + +G +
Sbjct 1 MLKGFKDFLFRGNVVDLAVAVVIGTAFVAIVTAFTNGIINPLLAVFGGEDELGLGFRLVA 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLRKK--GEVEQP-GDTQVVLLTEI 117
I + +++A INF ++A +YF++VLP ++K+ GEVE+P DT+ LL +I
Sbjct 61 DKPATFIAIGPVITATINFVIVAAVLYFVLVLPATQMKKRFGGEVEEPLSDTE--LLVQI 118
Query 118 RDLLAQTNGDSPGRH 132
RDLLA + GRH
Sbjct 119 RDLLAAGQESAGGRH 133
>gi|145295049|ref|YP_001137870.1| hypothetical protein cgR_0992 [Corynebacterium glutamicum R]
gi|140844969|dbj|BAF53968.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344043620|gb|EGV39309.1| large-conductance mechanosensitive channel [Corynebacterium glutamicum
S9114]
Length=135
Score = 110 bits (274), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/131 (49%), Positives = 87/131 (67%), Gaps = 9/131 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+++LAVAVVIGTAFTA+VT F+++II PLI +G +G I
Sbjct 1 MLKGFRDFILRGNVIELAVAVVIGTAFTAIVTAFSENIINPLIASVGSTDVEGLG-FHIR 59
Query 61 IGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG--EVEQPGDTQVV 112
G T +D +++AAINF +IA VYF++V P N L ++KG E E P +
Sbjct 60 AGNAATFVDFGAVITAAINFLIIAAIVYFVLVAPMNKLSETLAKRKGVEEDETPASIEAE 119
Query 113 LLTEIRDLLAQ 123
LLTEIRDLL +
Sbjct 120 LLTEIRDLLQE 130
>gi|25027509|ref|NP_737563.1| putative large-conductance mechanosensitive channel protein [Corynebacterium
efficiens YS-314]
gi|259507083|ref|ZP_05749983.1| large conductance mechanosensitive channel protein [Corynebacterium
efficiens YS-314]
gi|23492791|dbj|BAC17763.1| putative large-conductance mechanosensitive channel protein [Corynebacterium
efficiens YS-314]
gi|259165361|gb|EEW49915.1| large conductance mechanosensitive channel protein [Corynebacterium
efficiens YS-314]
Length=151
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/139 (48%), Positives = 85/139 (62%), Gaps = 9/139 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+V+LAVAVVIGTAFT +VT F+ II PLI +G S +G
Sbjct 1 MLKGFRDFILRGNVVELAVAVVIGTAFTGIVTAFSTHIINPLIASVGGADVSGLGFHIFA 60
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG---EVEQPGDTQVV 112
ID +++AAINF +IA VYF+++ P N L R+KG E E P +
Sbjct 61 DNPATFIDFGAVITAAINFLIIAAIVYFVLITPMNKLNEALARRKGVEEEEEAPASLEAE 120
Query 113 LLTEIRD-LLAQTNGDSPG 130
LLTEIRD LL Q N + G
Sbjct 121 LLTEIRDLLLEQKNQQAAG 139
>gi|38233456|ref|NP_939223.1| large-conductance mechanosensitive channel [Corynebacterium diphtheriae
NCTC 13129]
gi|38199716|emb|CAE49376.1| large-conductance mechanosensitive channel [Corynebacterium diphtheriae]
Length=134
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/134 (49%), Positives = 87/134 (65%), Gaps = 10/134 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGI-LRI 59
MLKGFK+F+ RGN+V+LAVAVVIGTAFTA+VT F++ +I P+I +G S +G LR
Sbjct 1 MLKGFKDFILRGNVVELAVAVVIGTAFTAIVTAFSEHLINPMIAALGGADVSGLGFYLRS 60
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKGEVEQ---PGDTQV 111
G +D +++AA+NF +IA VYF++V P N L R+KG VE+ P +
Sbjct 61 G-NDATFMDFGAVITAALNFLIIAAVVYFILVAPMNKLNEMAARRKGVVEEEEAPASIEA 119
Query 112 VLLTEIRDLLAQTN 125
LL EIRDLL N
Sbjct 120 ELLEEIRDLLKNRN 133
>gi|256374773|ref|YP_003098433.1| large conductance mechanosensitive channel protein [Actinosynnema
mirum DSM 43827]
gi|255919076|gb|ACU34587.1| large conductance mechanosensitive channel protein [Actinosynnema
mirum DSM 43827]
Length=176
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/156 (43%), Positives = 101/156 (65%), Gaps = 11/156 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGI-LRI 59
M+KGFK+FL RGN++DLAVAVVIG AF ++VT FT+++I PL+ +G ++ VG +++
Sbjct 1 MIKGFKDFLMRGNVIDLAVAVVIGAAFGSIVTAFTNNLINPLVALVG-GMENPVGFAVQL 59
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL---RKKGEVEQPGD-TQVVLLT 115
G T+D L++A +NF +IA +YF+ VLP N + R++G+ P + T V LL
Sbjct 60 GASPKTTMDFGALVTAVMNFVIIAAVIYFVFVLPMNKIKERRERGQEAGPSEPTDVELLK 119
Query 116 EIRDLL-AQTNGDSPGRHGGRGTPSPTDGPRASTES 150
EIRDL+ AQ S G G + T S GP+++ +
Sbjct 120 EIRDLMVAQA---SQGNQGAQRT-SAQSGPQSAPQQ 151
>gi|68536613|ref|YP_251318.1| hypothetical protein jk1527 [Corynebacterium jeikeium K411]
gi|260577814|ref|ZP_05845748.1| large conductance mechanosensitive channel protein [Corynebacterium
jeikeium ATCC 43734]
gi|68264212|emb|CAI37700.1| mscL [Corynebacterium jeikeium K411]
gi|258604041|gb|EEW17284.1| large conductance mechanosensitive channel protein [Corynebacterium
jeikeium ATCC 43734]
Length=144
Score = 108 bits (270), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/142 (44%), Positives = 93/142 (66%), Gaps = 11/142 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGI-LRI 59
ML+GFK+F+ RGN+++LAVAV+IG AFTA+VT FT I+ PL+ +G + + +G LR
Sbjct 1 MLEGFKKFIMRGNVMELAVAVIIGGAFTAIVTAFTSGIVEPLLAAVGGSPEFGMGFHLRE 60
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVL 113
G +++ +L+AA+NF +IA +YFL+++P N L R+KG E E+ T+ L
Sbjct 61 G-NDATFVNIGAVLTAAVNFLIIAAVIYFLMIMPMNKLAEMNARRKGIEPEEAAATETEL 119
Query 114 LTEIRDLLAQTNG---DSPGRH 132
L EIRDLL + G + G+H
Sbjct 120 LAEIRDLLLEQRGGEAEPTGKH 141
>gi|269796339|ref|YP_003315794.1| large conductance mechanosensitive channel protein [Sanguibacter
keddieii DSM 10542]
gi|269098524|gb|ACZ22960.1| large conductance mechanosensitive channel protein [Sanguibacter
keddieii DSM 10542]
Length=164
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/154 (45%), Positives = 96/154 (63%), Gaps = 11/154 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDV-GILRI 59
+L GFKEF+ RGN +DLAV V+IG AF+A+V +++ TPLI I + D+ +L
Sbjct 4 VLNGFKEFIMRGNAIDLAVGVIIGAAFSAVVAAIVENLFTPLIAAI--FGEPDLSSVLSF 61
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYN---TLRKKGEVEQP-GDTQ-VVLL 114
I G + +L+A INF +A A+YF VVLP N LRKKG +E+P G ++ V++L
Sbjct 62 TINGA-AFSIGAVLNAVINFLFVAIALYFFVVLPLNHLSKLRKKGIIEEPEGPSEDVLIL 120
Query 115 TEIRD-LLAQTNGDSPGRHGGRGTP-SPTDGPRA 146
T+IRD LL Q G + G TP +PT GP+A
Sbjct 121 TQIRDLLLVQNGGPATGTASAPSTPDAPTTGPQA 154
>gi|300790123|ref|YP_003770414.1| large conductance mechanosensitive channel, MscL family [Amycolatopsis
mediterranei U32]
gi|299799637|gb|ADJ50012.1| large conductance mechanosensitive channel, MscL family [Amycolatopsis
mediterranei U32]
gi|340531803|gb|AEK47008.1| large conductance mechanosensitive channel, MscL family protein
[Amycolatopsis mediterranei S699]
Length=138
Score = 107 bits (267), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/126 (51%), Positives = 86/126 (69%), Gaps = 5/126 (3%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRI-GVNAQSDVGILRI 59
MLKGFK+FL RGN+VDLAVAVVIG+AFTA+VT FT+ +I PLI+ I G +A + +G
Sbjct 1 MLKGFKDFLMRGNVVDLAVAVVIGSAFTAIVTAFTNGLIKPLISTIGGTDAANGLGYQIF 60
Query 60 GIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL---RKKGEVEQPGD-TQVVLLT 115
+D +++AAINF L+A VYF++V+P + RK+G+ P + T V LL
Sbjct 61 DNNKATFLDFGGVINAAINFVLVAAVVYFVIVMPVKKVQERRKRGQEPGPSEPTDVELLI 120
Query 116 EIRDLL 121
EIRDLL
Sbjct 121 EIRDLL 126
>gi|337290331|ref|YP_004629352.1| Large-conductance mechanosensitive channel [Corynebacterium ulcerans
BR-AD22]
gi|334696447|gb|AEG81244.1| Large-conductance mechanosensitive channel [Corynebacterium ulcerans
809]
gi|334698637|gb|AEG83433.1| Large-conductance mechanosensitive channel [Corynebacterium ulcerans
BR-AD22]
Length=137
Score = 107 bits (266), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/138 (49%), Positives = 88/138 (64%), Gaps = 15/138 (10%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+V+LAVAVVIGTAFTA+VT FT+ +I PLI +G +DV L
Sbjct 1 MLKGFKDFILRGNVVELAVAVVIGTAFTAIVTAFTNHLINPLIASLG---GADVSGLGFH 57
Query 61 IGGGQT---IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG---EVEQPGDT 109
I G +D +++AA+NF +IA VYF++V P N L ++KG E + P
Sbjct 58 IRSGNEATFLDFGAVITAALNFIIIAAVVYFILVAPMNKLNEMAAKRKGIQEEEDAPASI 117
Query 110 QVVLLTEIRDLLA-QTNG 126
+ LL EIRDLL Q NG
Sbjct 118 EAELLEEIRDLLKNQRNG 135
>gi|225023054|ref|ZP_03712246.1| hypothetical protein CORMATOL_03102 [Corynebacterium matruchotii
ATCC 33806]
gi|224944277|gb|EEG25486.1| hypothetical protein CORMATOL_03102 [Corynebacterium matruchotii
ATCC 33806]
Length=132
Score = 107 bits (266), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 62/129 (49%), Positives = 85/129 (66%), Gaps = 9/129 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+++LAVAVVIG+AFT +VT FT+ II PLI +G +G +I
Sbjct 1 MLKGFRDFILRGNVIELAVAVVIGSAFTNIVTAFTNKIINPLIASLGSTEVKGLG-FQIR 59
Query 61 IGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-------RKKGEVEQPGDTQVV 112
G +T +D +++AAINF ++A VYF++++P N L KK E D VV
Sbjct 60 PGVAETFVDFGAVITAAINFLMVAAVVYFVLIVPMNKLSSLMSSKEKKEAAETVLDPDVV 119
Query 113 LLTEIRDLL 121
LLTEIRDLL
Sbjct 120 LLTEIRDLL 128
>gi|148273633|ref|YP_001223194.1| putative large-conductance mechanosensitive channel [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147831563|emb|CAN02530.1| putative large-conductance mechanosensitive channel [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length=160
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/154 (45%), Positives = 88/154 (58%), Gaps = 19/154 (12%)
Query 2 LKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIGI 61
+KGFKEF+ RGN++DLAVAVVIG AFTA+VT ++I PLI + NA + +IGI
Sbjct 1 MKGFKEFILRGNVIDLAVAVVIGAAFTAIVTAIVTNLINPLIGAL-FNASTLAEAWKIGI 59
Query 62 ----GGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTLR-------KKGEVEQPGD-- 108
GG T+ L +++A INF ++A VYF +VLP N L+ K E P D
Sbjct 60 PTASGGTATLMLGAVVAAIINFLIVAAVVYFALVLPVNHLKKVAFAKQKAAEEATPKDVP 119
Query 109 -TQVVLLTEIRDLLAQTNGDSPGRHGGRGTPSPT 141
T+ LL EIRDLLA P G PS T
Sbjct 120 PTETELLIEIRDLLA----GRPSPEGSHTVPSST 149
>gi|227832658|ref|YP_002834365.1| transport protein of the large conductance mechanosensitive ion
channel family [Corynebacterium aurimucosum ATCC 700975]
gi|262182857|ref|ZP_06042278.1| transport protein of the large conductance mechanosensitive ion
channel family [Corynebacterium aurimucosum ATCC 700975]
gi|227453674|gb|ACP32427.1| transport protein of the large conductance mechanosensitive ion
channel family [Corynebacterium aurimucosum ATCC 700975]
Length=142
Score = 106 bits (265), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/142 (45%), Positives = 89/142 (63%), Gaps = 11/142 (7%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+++LAVAV+IG AFTA+VT TDS+I PLIN G + +G +I
Sbjct 1 MLKGFKDFIMRGNVIELAVAVIIGGAFTAIVTSVTDSLIQPLINSFGSPEVAGLG-FQIT 59
Query 61 IGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQVVLL 114
+D +++A INF +IA VYF ++ P N + R++G + E+P T LL
Sbjct 60 DNPKTFVDFGAVITAIINFLIIAAVVYFGIIAPINAITERAKRRQGVDPEEPAPTTEQLL 119
Query 115 TEIRDLLAQTNG----DSPGRH 132
EIRDL+A NG + PG +
Sbjct 120 AEIRDLIAAENGGTTTNKPGSN 141
>gi|334564604|ref|ZP_08517595.1| large conductance mechanosensitive ion channel family transporter
[Corynebacterium bovis DSM 20582]
Length=172
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/135 (46%), Positives = 86/135 (64%), Gaps = 12/135 (8%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGFK+F+ RGN+++LAVAVVIG+AFTA+VT FT II PLIN +N D L +
Sbjct 1 MLKGFKDFILRGNVIELAVAVVIGSAFTAIVTAFTKGIINPLIN--AINGNVDASGLTVP 58
Query 61 IGGGQ----TIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG-EVEQPGDTQ 110
+ G +D +++AAINF +IA VYF+++ P N L R+KG + + T+
Sbjct 59 LRGHDRADAIVDFGSVITAAINFLIIAAVVYFILIAPMNKLKEIQNRRKGIDPTEAAATE 118
Query 111 VVLLTEIRDLLAQTN 125
LL +IRDLL + N
Sbjct 119 TELLEQIRDLLIEQN 133
>gi|305681864|ref|ZP_07404668.1| large conductance mechanosensitive channel protein [Corynebacterium
matruchotii ATCC 14266]
gi|305658337|gb|EFM47840.1| large conductance mechanosensitive channel protein [Corynebacterium
matruchotii ATCC 14266]
Length=132
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/129 (48%), Positives = 84/129 (66%), Gaps = 9/129 (6%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+++LAVAVVIG+AFT +VT FT+ II PLI +G +G +I
Sbjct 1 MLKGFRDFILRGNVIELAVAVVIGSAFTNIVTAFTNKIINPLIASLGSTEVKGLG-FQIR 59
Query 61 IGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-------RKKGEVEQPGDTQVV 112
G +T +D +++AAINF ++A VYF++++P N L KK E VV
Sbjct 60 PGVAETFVDFGAVITAAINFLMVAAVVYFVLIVPMNKLSSLMSSKEKKEAAETAPAADVV 119
Query 113 LLTEIRDLL 121
LLTEIRDLL
Sbjct 120 LLTEIRDLL 128
>gi|237785102|ref|YP_002905807.1| large conductance mechanosensitive ion channel family transporter
[Corynebacterium kroppenstedtii DSM 44385]
gi|237758014|gb|ACR17264.1| transport protein of the large conductance mechanosensitive ion
channel family [Corynebacterium kroppenstedtii DSM 44385]
Length=187
Score = 104 bits (259), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/156 (48%), Positives = 95/156 (61%), Gaps = 19/156 (12%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSDVGILRIG 60
MLKGF++F+ RGN+++LA+AVVIG+AFTA+VT FT II PLI G A +D R+
Sbjct 1 MLKGFRDFIMRGNVIELAMAVVIGSAFTAIVTAFTKYIINPLIACFG-GANTDGWGFRLI 59
Query 61 IGGGQT-IDLNVLLSAAINFFLIAFAVYFLVVLPYNTL---RKKG---EVEQPGDTQVVL 113
G +T +D +L+A INF +IA VYF++V P N L RKK + E+ T+ L
Sbjct 60 RGNEKTFLDFGSVLTAVINFLIIAAVVYFILVAPMNKLEEIRKKHMGVKEEEVPVTEKDL 119
Query 114 LTEIRDLLAQTNGDSPGRHGGRGTPSPTDGPRASTE 149
L EIRDLLA N S TPS T ASTE
Sbjct 120 LLEIRDLLAAQNQVS--------TPSQT---LASTE 144
>gi|184200296|ref|YP_001854503.1| large-conductance mechanosensitive channel [Kocuria rhizophila
DC2201]
gi|183580526|dbj|BAG28997.1| large-conductance mechanosensitive channel [Kocuria rhizophila
DC2201]
Length=144
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/149 (43%), Positives = 86/149 (58%), Gaps = 16/149 (10%)
Query 1 MLKGFKEFLARGNIVDLAVAVVIGTAFTALVTKFTDSIITPLINRIGVNAQSD---VGIL 57
ML GFKEF+ +GN++DLAVAV+IG AF+ +V +S++ P I+ + + D V L
Sbjct 1 MLSGFKEFIMKGNVMDLAVAVIIGAAFSKIVNALVESVLMPAISAVVGSPNFDTFAVVTL 60
Query 58 RIGIGGGQTIDLNVLLSAAINFFLIAFAVYFLVVLPYNTL-----RKKG--EVEQPGDTQ 110
R G + VLL+A +NF LIA AVYF +VLP N + R+ G +P D
Sbjct 61 R-----GNELKFGVLLTAVVNFLLIAAAVYFCIVLPMNKMIERRNRRMGIEPTAEPADPN 115
Query 111 VVLLTEIRDLLAQTNGDSPGRHGGRGTPS 139
VLLTEIRD LA N +PG G P+
Sbjct 116 TVLLTEIRDALAG-NPAAPGAEGRHSGPA 143
Lambda K H
0.321 0.140 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 128896424032
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40