BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv0999 Length=252 Score E Sequences producing significant alignments: (Bits) Value gi|15608139|ref|NP_215514.1| hypothetical protein Rv0999 [Mycoba... 501 4e-140 gi|289761135|ref|ZP_06520513.1| conserved hypothetical protein [... 493 1e-137 gi|254549985|ref|ZP_05140432.1| hypothetical protein Mtube_05908... 440 1e-121 gi|240169304|ref|ZP_04747963.1| hypothetical protein MkanA1_0832... 330 1e-88 gi|183984464|ref|YP_001852755.1| hypothetical protein MMAR_4494 ... 312 3e-83 gi|41407038|ref|NP_959874.1| hypothetical protein MAP0940 [Mycob... 310 9e-83 gi|118619739|ref|YP_908071.1| hypothetical protein MUL_4666 [Myc... 309 2e-82 gi|342860605|ref|ZP_08717256.1| hypothetical protein MCOL_17061 ... 303 1e-80 gi|118463181|ref|YP_880375.1| hypothetical protein MAV_1123 [Myc... 303 2e-80 gi|336461385|gb|EGO40256.1| hypothetical protein MAPs_31250 [Myc... 301 5e-80 gi|296169839|ref|ZP_06851453.1| conserved hypothetical protein [... 297 1e-78 gi|254823421|ref|ZP_05228422.1| hypothetical protein MintA_26061... 286 2e-75 gi|333989595|ref|YP_004522209.1| hypothetical protein JDM601_095... 256 3e-66 gi|118467505|ref|YP_889691.1| hypothetical protein MSMEG_5452 [M... 249 4e-64 gi|315442957|ref|YP_004075836.1| hypothetical protein Mspyr1_132... 236 3e-60 gi|126437223|ref|YP_001072914.1| hypothetical protein Mjls_4658 ... 235 5e-60 gi|145222510|ref|YP_001133188.1| hypothetical protein Mflv_1920 ... 234 7e-60 gi|108801243|ref|YP_641440.1| hypothetical protein Mmcs_4279 [My... 226 2e-57 gi|120405763|ref|YP_955592.1| hypothetical protein Mvan_4813 [My... 225 5e-57 gi|169628212|ref|YP_001701861.1| hypothetical protein MAB_1119 [... 160 2e-37 gi|333990198|ref|YP_004522812.1| hypothetical protein JDM601_155... 132 5e-29 gi|169628801|ref|YP_001702450.1| hypothetical protein MAB_1711c ... 70.9 2e-10 gi|296169838|ref|ZP_06851452.1| conserved hypothetical protein [... 55.1 1e-05 gi|333991195|ref|YP_004523809.1| hypothetical protein JDM601_255... 53.1 3e-05 gi|183984465|ref|YP_001852756.1| hypothetical protein MMAR_4495 ... 52.8 4e-05 gi|118468257|ref|YP_889692.1| hypothetical protein MSMEG_5453 [M... 50.8 2e-04 gi|118619740|ref|YP_908072.1| hypothetical protein MUL_5094 [Myc... 50.1 3e-04 gi|342860604|ref|ZP_08717255.1| hypothetical protein MCOL_17056 ... 48.5 0.001 gi|240169305|ref|ZP_04747964.1| hypothetical protein MkanA1_0832... 47.4 0.002 gi|315442956|ref|YP_004075835.1| hypothetical protein Mspyr1_132... 46.6 0.003 gi|145222509|ref|YP_001133187.1| hypothetical protein Mflv_1919 ... 46.2 0.005 gi|254823422|ref|ZP_05228423.1| hypothetical protein MintA_26066... 42.0 0.086 gi|254773998|ref|ZP_05215514.1| hypothetical protein MaviaA2_048... 41.6 0.12 gi|118462648|ref|YP_880374.1| hypothetical protein MAV_1122 [Myc... 41.2 0.13 gi|111023765|ref|YP_706737.1| hypothetical protein RHA1_ro06807 ... 39.7 0.48 gi|41407037|ref|NP_959873.1| hypothetical protein MAP0939 [Mycob... 38.5 0.91 gi|336461386|gb|EGO40257.1| hypothetical protein MAPs_31260 [Myc... 38.1 1.2 gi|157963476|ref|YP_001503510.1| hypothetical protein Spea_3664 ... 37.0 3.0 gi|116075684|ref|ZP_01472943.1| Short-chain dehydrogenase/reduct... 35.4 7.0 >gi|15608139|ref|NP_215514.1| hypothetical protein Rv0999 [Mycobacterium tuberculosis H37Rv] gi|15840427|ref|NP_335464.1| hypothetical protein MT1028 [Mycobacterium tuberculosis CDC1551] gi|31792190|ref|NP_854683.1| hypothetical protein Mb1026 [Mycobacterium bovis AF2122/97] 52 more sequence titles Length=252 Score = 501 bits (1290), Expect = 4e-140, Method: Compositional matrix adjust. Identities = 251/252 (99%), Positives = 252/252 (100%), Gaps = 0/252 (0%) Query 1 VRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS 60 +RPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS Sbjct 1 MRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS 60 Query 61 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT 120 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT Sbjct 61 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT 120 Query 121 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI 180 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI Sbjct 121 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI 180 Query 181 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 240 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR Sbjct 181 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 240 Query 241 DLLVQAVAAVRG 252 DLLVQAVAAVRG Sbjct 241 DLLVQAVAAVRG 252 >gi|289761135|ref|ZP_06520513.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] gi|289708641|gb|EFD72657.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503] Length=256 Score = 493 bits (1269), Expect = 1e-137, Method: Compositional matrix adjust. Identities = 247/247 (100%), Positives = 247/247 (100%), Gaps = 0/247 (0%) Query 1 VRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS 60 VRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS Sbjct 8 VRPPLAPQFAADLLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTAS 67 Query 61 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT 120 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT Sbjct 68 TGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPT 127 Query 121 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI 180 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI Sbjct 128 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHI 187 Query 181 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 240 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR Sbjct 188 DGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 247 Query 241 DLLVQAV 247 DLLVQAV Sbjct 248 DLLVQAV 254 >gi|254549985|ref|ZP_05140432.1| hypothetical protein Mtube_05908 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308231694|ref|ZP_07413472.2| hypothetical protein TMAG_00939 [Mycobacterium tuberculosis SUMu001] gi|308370099|ref|ZP_07420287.2| hypothetical protein TMBG_01612 [Mycobacterium tuberculosis SUMu002] 23 more sequence titles Length=219 Score = 440 bits (1131), Expect = 1e-121, Method: Compositional matrix adjust. Identities = 219/219 (100%), Positives = 219/219 (100%), Gaps = 0/219 (0%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF Sbjct 1 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 60 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS Sbjct 61 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 120 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG Sbjct 121 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 180 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG Sbjct 181 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 219 >gi|240169304|ref|ZP_04747963.1| hypothetical protein MkanA1_08321 [Mycobacterium kansasii ATCC 12478] Length=220 Score = 330 bits (846), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 163/222 (74%), Positives = 187/222 (85%), Gaps = 2/222 (0%) Query 31 LTTMRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDP 90 + TM K VLA+ +VC LVGCS GAS + + DIAKV +VK+ FGP +TV DV PRAIDP Sbjct 1 MATMSKVVLALVAVCLLVGCSPGASQSPKA--DIAKVIDVKASFGPGFTVNDVPPRAIDP 58 Query 91 GFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLP 150 FF+ARKLPDGLSFDPANCA+ A GPQ+P+G+QGNMAAV+AEGNGNRFVVIAVETSQ LP Sbjct 59 QFFAARKLPDGLSFDPANCAKAALGPQMPSGVQGNMAAVTAEGNGNRFVVIAVETSQQLP 118 Query 151 APSPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSA 210 PGK+C ++ FSG Q+RGGIE+V PHIDG QTLGVHRVLQA+V GSARTGELYDYSA Sbjct 119 FNDPGKECGRIAFSGAQVRGGIEMVAAPHIDGAQTLGVHRVLQALVDGSARTGELYDYSA 178 Query 211 RFGDYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 +FG YQV VIANPLVIP +PVA VD QRARDLLV+AVAA+RG Sbjct 179 QFGYYQVNVIANPLVIPNQPVAPVDVQRARDLLVKAVAAIRG 220 >gi|183984464|ref|YP_001852755.1| hypothetical protein MMAR_4494 [Mycobacterium marinum M] gi|183177790|gb|ACC42900.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=217 Score = 312 bits (800), Expect = 3e-83, Method: Compositional matrix adjust. Identities = 153/218 (71%), Positives = 179/218 (83%), Gaps = 2/218 (0%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 M K LA+G VC LVGCS GAS + T DI++V E+KS FGP++ V+++ PRAIDP FF Sbjct 1 MSKVALALGLVCLLVGCSHGASPSM--TADISRVTELKSSFGPDFKVSEIPPRAIDPQFF 58 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 +ARKLPDGL+FDPA CA A GP LP GLQGNMAAV+AEGNGNRFVVIAVETSQ LP Sbjct 59 AARKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVETSQTLPTND 118 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGK+C+K+ FSG +RGGIEVV+ PHI+G TLGVHRVLQA+V GSA TGELYD+SA+FG Sbjct 119 PGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQALVDGSAHTGELYDFSAQFG 178 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 DYQ+ VIANPLV+PG+ VA VDT RARDLLV+AV AVR Sbjct 179 DYQLNVIANPLVVPGQNVAPVDTHRARDLLVKAVQAVR 216 >gi|41407038|ref|NP_959874.1| hypothetical protein MAP0940 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395389|gb|AAS03257.1| hypothetical protein MAP_0940 [Mycobacterium avium subsp. paratuberculosis K-10] Length=223 Score = 310 bits (795), Expect = 9e-83, Method: Compositional matrix adjust. Identities = 155/224 (70%), Positives = 179/224 (80%), Gaps = 3/224 (1%) Query 28 LGRLTTMRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRA 87 +GRL TM K + AV +VC L GCSS +T + DIAKVA+VK FGP+Y V+D R Sbjct 1 MGRLATMSKLLRAVAAVCVLAGCSS---ATHPAKVDIAKVADVKPSFGPDYKVSDTGERG 57 Query 88 IDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQ 147 IDP + RKLPDGL+FDPA CA+VA+GP LP LQGNMAAV+AEG GNRFVVIA+ETS+ Sbjct 58 IDPKLLAGRKLPDGLTFDPAQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALETSK 117 Query 148 PLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYD 207 LP PGKDC+KVTFSG QLRGG++VVD P ID +TLGVHRVLQA+ G RTGELYD Sbjct 118 ALPFNDPGKDCAKVTFSGAQLRGGVQVVDAPQIDSARTLGVHRVLQALTPGGPRTGELYD 177 Query 208 YSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 YSA+FGDYQVIVIANPLVIP +PVA VDTQRARDLLV+AVA+VR Sbjct 178 YSAQFGDYQVIVIANPLVIPNQPVAPVDTQRARDLLVKAVASVR 221 >gi|118619739|ref|YP_908071.1| hypothetical protein MUL_4666 [Mycobacterium ulcerans Agy99] gi|118571849|gb|ABL06600.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=217 Score = 309 bits (792), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 151/218 (70%), Positives = 178/218 (82%), Gaps = 2/218 (0%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 M K LA+G VC LVGCS GA+ + T DI++V E+KS FGP++ V+++ PRAIDP FF Sbjct 1 MSKVALALGLVCLLVGCSHGAAPSM--TADISRVTELKSSFGPDFKVSEIPPRAIDPQFF 58 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 +ARKLPDGL+FDPA CA A GP LP GLQGNMAAV+AEGNGNRFVVIAVETSQ LP Sbjct 59 AARKLPDGLTFDPAICATAAVGPPLPPGLQGNMAAVTAEGNGNRFVVIAVETSQTLPTND 118 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGK+C+K+ FSG +RGGIEVV+ PHI+G TLGVHRVLQA+V GSA TGELYD+SA+FG Sbjct 119 PGKECAKIAFSGAGVRGGIEVVEAPHIEGVHTLGVHRVLQALVDGSAHTGELYDFSAQFG 178 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 DYQ+ IANPLV+PG+ VA VDT RARDLLV+AV AVR Sbjct 179 DYQLNAIANPLVVPGQNVAPVDTHRARDLLVKAVQAVR 216 >gi|342860605|ref|ZP_08717256.1| hypothetical protein MCOL_17061 [Mycobacterium colombiense CECT 3035] gi|342132260|gb|EGT85501.1| hypothetical protein MCOL_17061 [Mycobacterium colombiense CECT 3035] Length=216 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 146/218 (67%), Positives = 179/218 (83%), Gaps = 3/218 (1%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 M K +LAV +VC L GCSS +T ++ DI KV +VKS FGPE+ V+D++ R IDP Sbjct 1 MSKMLLAVVAVCVLAGCSS---ATHSAKVDIDKVVDVKSSFGPEFKVSDISERGIDPKLL 57 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 + RKLPDGL+FDPANCA+VAAGP +P L+GNM+AV+AEG GNRFVVIA+ETS+ LP Sbjct 58 AGRKLPDGLTFDPANCAKVAAGPDMPADLKGNMSAVTAEGRGNRFVVIALETSKALPFND 117 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGKDC+KVTF+G Q+RGG++VVDVP I+ T+TLGVHRV+QA+ G RTGELYDYSA FG Sbjct 118 PGKDCNKVTFTGPQMRGGVQVVDVPQIESTRTLGVHRVMQALTPGGPRTGELYDYSAAFG 177 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 DYQVIVIANPLV+P +PVA +DTQRARDLLV+AV+AVR Sbjct 178 DYQVIVIANPLVLPNQPVAAIDTQRARDLLVKAVSAVR 215 >gi|118463181|ref|YP_880375.1| hypothetical protein MAV_1123 [Mycobacterium avium 104] gi|254773999|ref|ZP_05215515.1| hypothetical protein MaviaA2_04894 [Mycobacterium avium subsp. avium ATCC 25291] gi|118164468|gb|ABK65365.1| conserved hypothetical protein [Mycobacterium avium 104] Length=217 Score = 303 bits (776), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 152/218 (70%), Positives = 174/218 (80%), Gaps = 3/218 (1%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 M K + AV +VC L GCSS +T + DIAKVAEVK FGP+Y V+D R IDP Sbjct 1 MSKLLRAVAAVCVLAGCSS---ATHPAKVDIAKVAEVKPSFGPDYKVSDTGERGIDPKLL 57 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 + RKLPDGL+FDPA CA+VA+GP LP LQGNMAAV+AEG GNRFVVIA+ETS+ LP Sbjct 58 AGRKLPDGLTFDPAQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALETSKALPFND 117 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGKDC+KVTFSG QLRGG++VVD P ID +TLGVHRVLQA+ G RTGELYDYSA+FG Sbjct 118 PGKDCAKVTFSGAQLRGGVQVVDAPQIDSARTLGVHRVLQALTPGGPRTGELYDYSAQFG 177 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 DYQVIVIANPLVIP +PVA VDTQRARDLLV+AVA+VR Sbjct 178 DYQVIVIANPLVIPNQPVAPVDTQRARDLLVKAVASVR 215 >gi|336461385|gb|EGO40256.1| hypothetical protein MAPs_31250 [Mycobacterium avium subsp. paratuberculosis S397] Length=217 Score = 301 bits (772), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 151/218 (70%), Positives = 174/218 (80%), Gaps = 3/218 (1%) Query 34 MRKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFF 93 M K + AV +VC L GCSS +T + DIAKVA+VK FGP+Y V+D R IDP Sbjct 1 MSKLLRAVAAVCVLAGCSS---ATHPAKVDIAKVADVKPSFGPDYKVSDTGERGIDPKLL 57 Query 94 SARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPS 153 + RKLPDGL+FDPA CA+VA+GP LP LQGNMAAV+AEG GNRFVVIA+ETS+ LP Sbjct 58 AGRKLPDGLTFDPAQCAKVASGPDLPADLQGNMAAVTAEGRGNRFVVIALETSKALPFND 117 Query 154 PGKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFG 213 PGKDC+KVTFSG QLRGG++VVD P ID +TLGVHRVLQA+ G RTGELYDYSA+FG Sbjct 118 PGKDCAKVTFSGAQLRGGVQVVDAPQIDSARTLGVHRVLQALTPGGPRTGELYDYSAQFG 177 Query 214 DYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 DYQVIVIANPLVIP +PVA VDTQRARDLLV+AVA+VR Sbjct 178 DYQVIVIANPLVIPNQPVAPVDTQRARDLLVKAVASVR 215 >gi|296169839|ref|ZP_06851453.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895516|gb|EFG75216.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=220 Score = 297 bits (760), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 148/203 (73%), Positives = 165/203 (82%), Gaps = 2/203 (0%) Query 49 GCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPAN 108 GCSSGA + DI KV++VKS FGP++ VTD+ R IDP S RKLP+GL+FDPA+ Sbjct 19 GCSSGAGDSAKV--DIKKVSDVKSSFGPDFKVTDIGERGIDPKVLSGRKLPEGLTFDPAH 76 Query 109 CAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQL 168 CA+ A GP++P LQGNMAAVSAEG GNRFVVIAVETS+ LP PGKDC+KV FSG QL Sbjct 77 CAKSAMGPEMPPDLQGNMAAVSAEGKGNRFVVIAVETSKALPLNDPGKDCAKVAFSGPQL 136 Query 169 RGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPG 228 RGGIEVVD P IDGT TLGVHRVLQA+V G RTGELYDYSA+FGDYQVIV ANPLVIPG Sbjct 137 RGGIEVVDAPQIDGTHTLGVHRVLQALVAGGPRTGELYDYSAQFGDYQVIVTANPLVIPG 196 Query 229 RPVARVDTQRARDLLVQAVAAVR 251 +PVA VDTQRARDLLV AV AVR Sbjct 197 QPVAPVDTQRARDLLVSAVKAVR 219 >gi|254823421|ref|ZP_05228422.1| hypothetical protein MintA_26061 [Mycobacterium intracellulare ATCC 13950] Length=216 Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 139/203 (69%), Positives = 166/203 (82%), Gaps = 3/203 (1%) Query 49 GCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPAN 108 GCSS +T + DI KV +VKS FGP++ V+D++ R IDP + RKLPDGL+FDPAN Sbjct 16 GCSS---ATPEAKVDINKVVDVKSSFGPDFKVSDISERGIDPKLLAGRKLPDGLTFDPAN 72 Query 109 CAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQL 168 CA+VAAGP +P LQGNM+AV+AEG GNRFVVIA+ETS+ LP PGKDC KVTF+G QL Sbjct 73 CAKVAAGPDMPADLQGNMSAVTAEGRGNRFVVIALETSKALPLNDPGKDCQKVTFAGPQL 132 Query 169 RGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPG 228 RGG++VV+ P ID T+TLGVHRV+QA+ G RTGEL+DYSA FGDYQVIVIANPLVIP Sbjct 133 RGGVQVVEAPRIDSTRTLGVHRVMQALTPGGPRTGELFDYSASFGDYQVIVIANPLVIPD 192 Query 229 RPVARVDTQRARDLLVQAVAAVR 251 +PVA VDTQRARDLLV+AVA+VR Sbjct 193 QPVAPVDTQRARDLLVKAVASVR 215 >gi|333989595|ref|YP_004522209.1| hypothetical protein JDM601_0955 [Mycobacterium sp. JDM601] gi|333485563|gb|AEF34955.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=218 Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 125/217 (58%), Positives = 158/217 (73%), Gaps = 3/217 (1%) Query 36 KAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA 95 +AVLAVG V L CSS TA DI KV +++S FGPE+ V + P +DP +A Sbjct 5 RAVLAVGCVGLLAACSSDPGEVTA---DIGKVVDLESSFGPEFQVKAIAPTGLDPKLLAA 61 Query 96 RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPG 155 LP GL F+PA+C++ A QLP G+QGNMAAV+AEGNGNRF+ IA+ETS+P+P PG Sbjct 62 NTLPPGLKFEPADCSRFAVSQQLPQGVQGNMAAVAAEGNGNRFITIALETSEPVPFNEPG 121 Query 156 KDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDY 215 K C ++ F+G ++RG +E V+ P IDG QT+GVHRV++AV GG +R GELY+YSA FG Y Sbjct 122 KSCRRIGFAGERMRGLVETVEAPRIDGVQTIGVHRVVEAVAGGKSRVGELYNYSAYFGPY 181 Query 216 QVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 QV+V ANPLV P +PV VDT RAR+LLV AVAAVRG Sbjct 182 QVLVTANPLVAPDKPVIPVDTARARELLVAAVAAVRG 218 >gi|118467505|ref|YP_889691.1| hypothetical protein MSMEG_5452 [Mycobacterium smegmatis str. MC2 155] gi|118168792|gb|ABK69688.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=225 Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust. Identities = 119/212 (57%), Positives = 154/212 (73%), Gaps = 2/212 (0%) Query 41 VGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPD 100 + S L GCSS + DIAKVA++KS FGPE+ V++V P IDP S +KLP+ Sbjct 16 MASAMALAGCSSDGPAY--PDADIAKVAQLKSSFGPEFKVSEVAPTGIDPKLLSPQKLPE 73 Query 101 GLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSK 160 G+ F+PA+CA+ A G Q P GLQGNMAA +AEG GNRF+V+AVETS+P+P PG +C + Sbjct 74 GVKFEPADCAKFAEGQQFPPGLQGNMAATAAEGEGNRFIVMAVETSEPVPLSDPGDECKR 133 Query 161 VTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVI 220 V F GT RG ++VV+ P ID +T+G HR++Q +V G RTGELY+Y A F +Y VIV Sbjct 134 VKFLGTGARGQVDVVESPQIDDARTVGTHRIIQTMVQGQPRTGELYNYVASFDNYMVIVT 193 Query 221 ANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 ANPLV+P +PVA+VDT+RAR+LL AVAAVRG Sbjct 194 ANPLVLPDKPVAKVDTERARELLSAAVAAVRG 225 >gi|315442957|ref|YP_004075836.1| hypothetical protein Mspyr1_13220 [Mycobacterium sp. Spyr1] gi|315261260|gb|ADT98001.1| hypothetical protein Mspyr1_13220 [Mycobacterium sp. Spyr1] Length=223 Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 118/214 (56%), Positives = 150/214 (71%), Gaps = 0/214 (0%) Query 39 LAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKL 98 L V +V L + A + S DIA+VAEVKSGF P YTV V P AIDP F +A+KL Sbjct 10 LPVAAVVGLSTACNAAPAEDFSKADIARVAEVKSGFAPSYTVNTVGPAAIDPRFLTAQKL 69 Query 99 PDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDC 158 P GL+FDP +CA+ A +P G++GNMAA +AEG+G R++VIAVETS+ +P +P C Sbjct 70 PPGLTFDPQDCAKSATENTVPEGVKGNMAATTAEGDGVRYIVIAVETSEAVPVNTPSDQC 129 Query 159 SKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVI 218 KVTF+G +RG +EVV+ P +DG T+G HRVLQ V RTGELY+Y A FG++ VI Sbjct 130 RKVTFTGAGMRGLVEVVEAPAVDGVTTVGTHRVLQTVTEEGPRTGELYNYVATFGNFIVI 189 Query 219 VIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 V ANPLV+ +PVAR+DTQRARDL+ QAV V G Sbjct 190 VTANPLVVADKPVARIDTQRARDLVTQAVGLVMG 223 >gi|126437223|ref|YP_001072914.1| hypothetical protein Mjls_4658 [Mycobacterium sp. JLS] gi|126237023|gb|ABO00424.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=215 Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 118/217 (55%), Positives = 144/217 (67%), Gaps = 6/217 (2%) Query 36 KAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSA 95 K + AV V L C S DIA+V+EVK+ FG +Y D+ P IDP Sbjct 5 KKIAAVAGVGLLAACGS------PEDADIARVSEVKATFGEQYQYRDIAPTGIDPKLLQP 58 Query 96 RKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPG 155 +K+P G++F P CA+ A G L+GNMAA +AEG GNRF+ +AVET+ P+P PG Sbjct 59 QKMPAGMTFQPPECAKFAEGRLPEADLKGNMAAATAEGEGNRFIALAVETNAPVPVTEPG 118 Query 156 KDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDY 215 C KV FSG LRG +EVV+ PHIDG QT HRVLQ VV G+ RTGELY+Y+ARFG Y Sbjct 119 DSCKKVEFSGPGLRGAVEVVEAPHIDGVQTSATHRVLQTVVAGAPRTGELYNYTARFGTY 178 Query 216 QVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 VIV ANPLVIP +PVA V+T+RAR LLV AVAAV+G Sbjct 179 MVIVTANPLVIPDKPVAPVNTERARRLLVDAVAAVQG 215 >gi|145222510|ref|YP_001133188.1| hypothetical protein Mflv_1920 [Mycobacterium gilvum PYR-GCK] gi|145214996|gb|ABP44400.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=223 Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 117/214 (55%), Positives = 150/214 (71%), Gaps = 0/214 (0%) Query 39 LAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKL 98 L V +V L + A + S DIA+VAEVKSGF P YTV V P A+DP F +A+KL Sbjct 10 LPVAAVVGLSTACNAAPAEDFSKADIARVAEVKSGFAPSYTVNTVGPAALDPRFLTAQKL 69 Query 99 PDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDC 158 P GL+FDP +CA+ A +P G++GNMAA +AEG+G R++VIAVETS +P +P C Sbjct 70 PPGLTFDPQDCAKSATENTVPEGVKGNMAATTAEGDGVRYIVIAVETSDAVPVNTPSDQC 129 Query 159 SKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVI 218 KVTF+G +RG +EVV+ P +DG T+G HRVLQ V RTGELY+Y A FG++ VI Sbjct 130 RKVTFTGAGMRGLVEVVEAPAVDGVTTVGTHRVLQTVTEEGPRTGELYNYVATFGNFIVI 189 Query 219 VIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 V ANPLV+ +PVAR+DTQRARDL+ QAV V+G Sbjct 190 VTANPLVVADKPVARIDTQRARDLVTQAVGLVKG 223 >gi|108801243|ref|YP_641440.1| hypothetical protein Mmcs_4279 [Mycobacterium sp. MCS] gi|119870394|ref|YP_940346.1| hypothetical protein Mkms_4365 [Mycobacterium sp. KMS] gi|108771662|gb|ABG10384.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696483|gb|ABL93556.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=215 Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 110/190 (58%), Positives = 134/190 (71%), Gaps = 0/190 (0%) Query 63 DIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGL 122 DIA+V+EVK+ FG +Y D+ P IDP +K+P G+ F P CA+ A G L Sbjct 26 DIARVSEVKATFGEQYQYRDIAPTGIDPKLLQPQKMPAGMRFQPPECAKFAEGRLPEADL 85 Query 123 QGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHIDG 182 +GNMAA +AEG GNRF+ +AVET+ P+P PG C KV FSG LRG +EVV+ PHIDG Sbjct 86 KGNMAAATAEGEGNRFIALAVETNAPVPVTEPGDSCKKVEFSGPGLRGAVEVVEAPHIDG 145 Query 183 TQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDL 242 QT HRVLQ VV G+ RTGELY+Y+ARFG Y VIV ANPLVIP +PVA V+T+ AR L Sbjct 146 VQTSATHRVLQTVVAGAPRTGELYNYTARFGTYMVIVTANPLVIPDKPVAPVNTELARRL 205 Query 243 LVQAVAAVRG 252 LV AVAAV+G Sbjct 206 LVDAVAAVQG 215 >gi|120405763|ref|YP_955592.1| hypothetical protein Mvan_4813 [Mycobacterium vanbaalenii PYR-1] gi|119958581|gb|ABM15586.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=224 Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 115/218 (53%), Positives = 149/218 (69%), Gaps = 1/218 (0%) Query 35 RKAVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFS 94 +AV AV + CS+G S+ S DIA+V+E+KS F YTV V P IDP + + Sbjct 7 HRAVAAVVCAGLVAACSAGQSADL-SNADIARVSELKSSFPAPYTVNSVGPAGIDPRYLT 65 Query 95 ARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSP 154 A+KLP GL+FDPA+C + A +P G++GNMAA +AEG+G R++V+AVETS+P+P P Sbjct 66 AQKLPPGLTFDPADCGKSAGQQAIPEGVKGNMAATTAEGDGVRYIVLAVETSEPVPVNEP 125 Query 155 GKDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGD 214 C KVTF+G LRG +EVV+ P IDG +T+G HRVLQ RTGELY+Y A FG Sbjct 126 TDQCGKVTFAGPGLRGLVEVVEAPQIDGVRTVGTHRVLQTTSEQGPRTGELYNYVAHFGT 185 Query 215 YQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 + VIV ANPLV+ G+P ARVDTQRAR L+ Q V V+G Sbjct 186 FIVIVTANPLVVDGKPAARVDTQRARALVAQTVGLVKG 223 >gi|169628212|ref|YP_001701861.1| hypothetical protein MAB_1119 [Mycobacterium abscessus ATCC 19977] gi|169240179|emb|CAM61207.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=229 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 88/216 (41%), Positives = 129/216 (60%), Gaps = 2/216 (0%) Query 37 AVLAVGSVCWLVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSAR 96 A+ A+ +V + GC + I + ++S FGPE+TV + P +DP S Sbjct 14 AICALAAVV-VAGCGRSVQNPVNHNITIGNIVSLQSEFGPEFTVKTMKPAGMDPKLLSPA 72 Query 97 KLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLP-APSPG 155 LP G++ DP +CA+ + G +P L+GNMAA++A G GN++V +AVETSQ +P P+ Sbjct 73 PLPPGVTVDPPDCAKYSGGSAVPAELKGNMAALTATGAGNQYVAVAVETSQEVPFDPAVS 132 Query 156 KDCSKVTFSGTQLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDY 215 ++C KV F G + G EV+D P IDG +TLG+ R + + G A E+ +YSA G Y Sbjct 133 ENCKKVGFRGNGIAGQTEVIDAPSIDGARTLGMKRDVLSGTSGRAIGQEVLNYSAYLGRY 192 Query 216 QVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 V+V +P+ + P A D +RA DLLV+AVAAVR Sbjct 193 MVVVTVSPIAVGKVPPAMPDGKRASDLLVKAVAAVR 228 >gi|333990198|ref|YP_004522812.1| hypothetical protein JDM601_1558 [Mycobacterium sp. JDM601] gi|333486166|gb|AEF35558.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=209 Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust. Identities = 78/208 (38%), Positives = 110/208 (53%), Gaps = 8/208 (3%) Query 47 LVGCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDP 106 L GC G D K+ V+S FG EY P IDP +K+P G++FDP Sbjct 6 LTGCGGGQKPI-----DTTKLFNVESTFGSEYKTQTKGPNDIDPKILGPQKMPPGVTFDP 60 Query 107 ANCAQVAAGP-QLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPA-PSPGKDCSKVTFS 164 ++CA AA + P G++G M+ VS GNGN+ V IA++ Q LP S + C V+F Sbjct 61 SDCADYAASSGRPPKGIRGKMSMVSIVGNGNQLVAIAMQADQDLPYDESAAERCKHVSFQ 120 Query 165 GTQLRGGIEVVDVPHIDGTQTLGVHRVLQAV-VGGSARTGELYDYSARFGDYQVIVIANP 223 +L G ++ D P ID +T+G H ++ G ++ E Y ++A G V V ANP Sbjct 121 AGKLTGYLDETDAPEIDHAKTVGSHSEIEITGKDGQQQSRESYTFTAYLGSALVQVTANP 180 Query 224 LVIPGRPVARVDTQRARDLLVQAVAAVR 251 + G+P VD RAR LL AV+A+R Sbjct 181 QAVRGQPPGMVDADRARQLLADAVSALR 208 >gi|169628801|ref|YP_001702450.1| hypothetical protein MAB_1711c [Mycobacterium abscessus ATCC 19977] gi|169240768|emb|CAM61796.1| Conserved hypothetical protein [Mycobacterium abscessus] Length=238 Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 62/201 (31%), Positives = 92/201 (46%), Gaps = 23/201 (11%) Query 63 DIAKVAEVKSGFGPEYTV-----TDVTPRAIDPGFFSARKLPDGLSFDPANCAQ--VAAG 115 DIAK+ +K F YTV T VT + +D + + D +F P CA + A Sbjct 50 DIAKIDAIKDQFPAGYTVEVQPKTTVTQQMLD----QMKGIFDKATFTPQECADKMLGAF 105 Query 116 PQLP-TGLQGNMAAVSAEGNGNRFVVIA--VETSQPLPAPSPGKDCSKVTFSGTQLRGGI 172 PQ+ T +QG A ++ ++IA +ET P+PA + G C K T S + G Sbjct 106 PQVTGTTMQGVTGAKDGADPMSKTMIIAAAMETVNPIPADTTGGACDKFTLSIAGMAEGT 165 Query 173 -EVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPV 231 E +D P IDG QT G ++ G + YSA+ D+ I ++ + Sbjct 166 GEKIDAPAIDGVQTTGTSTSIKISAPGMEKEMAQVAYSAQLDDHHAISVSG--------M 217 Query 232 ARVDTQRARDLLVQAVAAVRG 252 VD D+ V+AV AV+G Sbjct 218 GDVDRNDLSDVFVKAVNAVKG 238 >gi|296169838|ref|ZP_06851452.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895515|gb|EFG75215.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=230 Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 55/182 (31%), Positives = 80/182 (44%), Gaps = 18/182 (9%) Query 86 RAIDPGFFSARKLPDGLS------FDPANCAQVAAGPQLPT-GLQGNMAAVSAEG---NG 135 R + PG+ ++ +PD S P A PQ GN SA+G +G Sbjct 52 RELPPGYEASTGIPDAASPRVIWGLAPGASGSKARPPQCAMLADPGNGRGRSAQGVTGSG 111 Query 136 NRFVVIAVETSQPLPAPSPGK---DCSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRV 191 + +V AV + P P PG C K T + + + + + PHIDG QT+G V + Sbjct 112 SGGIVDAVVVALPGPVDLPGDVVAACGKWTMTAGRATARVHLTNSPHIDGAQTVGMVADI 171 Query 192 LQAVVGGSARTGELYDYSARFGDYQVI-VIANPLVIPGRPVARVDTQRARDLLVQAVAAV 250 +V G+ Y + A GDY + N PG V + Q A DLLV+ V+ + Sbjct 172 TSSVESGTEIDSRTYTFIAYLGDYYAFTTLTND---PGSVVPALPPQFAADLLVKTVSTL 228 Query 251 RG 252 RG Sbjct 229 RG 230 Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust. Identities = 19/22 (87%), Positives = 19/22 (87%), Gaps = 0/22 (0%) Query 1 VRPPLAPQFAADLLVKTVSTLR 22 V P L PQFAADLLVKTVSTLR Sbjct 208 VVPALPPQFAADLLVKTVSTLR 229 >gi|333991195|ref|YP_004523809.1| hypothetical protein JDM601_2554 [Mycobacterium sp. JDM601] gi|333487162|gb|AEF36554.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=256 Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 45/151 (30%), Positives = 66/151 (44%), Gaps = 13/151 (8%) Query 104 FDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTF 163 FDP C V P + + A V +G+ V+A+ + +P+ C +++ Sbjct 116 FDPPQCRSVVIPPYVDPTVGTEAAGVIGQGDQGNMYVVAMRSPKPVATADDPVGCDRISL 175 Query 164 SGT-QLRGGIEVVDVPHIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQVIVIAN 222 SG+ Q G +E + P I G T GV + Y Y+A D IV+ Sbjct 176 SGSPQATGTVERIPAPAIPGVSTTGVKLTV-----ADPEEDPDYLYTAALNDRTSIVVM- 229 Query 223 PLVIPGRPVARVDTQR-ARDLLVQAVAAVRG 252 G ++D QR DLLV+AVAAVRG Sbjct 230 -----GSADQQLDPQRLMSDLLVKAVAAVRG 255 >gi|183984465|ref|YP_001852756.1| hypothetical protein MMAR_4495 [Mycobacterium marinum M] gi|183177791|gb|ACC42901.1| conserved hypothetical secreted protein [Mycobacterium marinum M] Length=225 Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 33/96 (35%), Positives = 49/96 (52%), Gaps = 3/96 (3%) Query 157 DCSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDY 215 +C++ T S R +E+V+ P I+G +TLG V RV V G+ + Y ++A GDY Sbjct 131 ECAQWTMSDGSTRANVELVEAPRIEGARTLGMVARVRTPVEAGAEIDSQTYTFTAYLGDY 190 Query 216 QVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 PG + + Q A DLLV+ VA +R Sbjct 191 YAFTAVT--TDPGSVLPPLPPQFAADLLVKTVAMLR 224 Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust. Identities = 19/23 (83%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 1 VRPPLAPQFAADLLVKTVSTLRS 23 V PPL PQFAADLLVKTV+ LRS Sbjct 203 VLPPLPPQFAADLLVKTVAMLRS 225 >gi|118468257|ref|YP_889692.1| hypothetical protein MSMEG_5453 [Mycobacterium smegmatis str. MC2 155] gi|118169544|gb|ABK70440.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=220 Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 53/193 (28%), Positives = 79/193 (41%), Gaps = 18/193 (9%) Query 63 DIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGL 122 D A++ V+ P Y V+ + R +DP S G P C Q A G P Sbjct 43 DPARIDRVRYDLPPGYEVSGLDGR-VDP--VSQWGFGAGWGAAPPECGQAALGAVDPASA 99 Query 123 QGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHIDG 182 +G +A G G + + + P+ +C T +G + +D P IDG Sbjct 100 RG----WTASGPGGIVYAVVADVTAPIQ----DAECGVWTVTGGHSTATVTRLDAPAIDG 151 Query 183 TQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQ---VIVIANPLVIPGRPVARVDTQRA 239 +T G+ + VV G T D A ++ V VI + PG P +D A Sbjct 152 ARTAGMSATIVTVVEGGTETQSRADTFAAESEHHRCAVTVITD----PGSPNPALDAGFA 207 Query 240 RDLLVQAVAAVRG 252 LLV+ V+A+RG Sbjct 208 AALLVKTVSALRG 220 >gi|118619740|ref|YP_908072.1| hypothetical protein MUL_5094 [Mycobacterium ulcerans Agy99] gi|118571850|gb|ABL06601.1| conserved hypothetical secreted protein [Mycobacterium ulcerans Agy99] Length=225 Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 32/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%) Query 157 DCSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDY 215 +C++ T S R +E+V+ P I+G +TLG V RV V G+ + Y ++A G Y Sbjct 131 ECAQWTMSDGSTRANVELVEAPRIEGARTLGMVARVRTPVEAGTEIDSQTYTFTAYLGGY 190 Query 216 QVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 PG + + Q A DLLV+ VA +R Sbjct 191 YAFTAVT--TDPGSVLPPLPPQFAADLLVKTVAMLR 224 Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust. Identities = 19/23 (83%), Positives = 20/23 (87%), Gaps = 0/23 (0%) Query 1 VRPPLAPQFAADLLVKTVSTLRS 23 V PPL PQFAADLLVKTV+ LRS Sbjct 203 VLPPLPPQFAADLLVKTVAMLRS 225 >gi|342860604|ref|ZP_08717255.1| hypothetical protein MCOL_17056 [Mycobacterium colombiense CECT 3035] gi|342132259|gb|EGT85500.1| hypothetical protein MCOL_17056 [Mycobacterium colombiense CECT 3035] Length=229 Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust. Identities = 53/192 (28%), Positives = 80/192 (42%), Gaps = 13/192 (6%) Query 65 AKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQG 124 A + V P Y VT P A P + L D L PA C +A G Sbjct 47 ANIKRVVRDLPPGYEVTTGIPSAASPRVIWS--LGDDLQARPAKCGALAD-----PGNGR 99 Query 125 NMAAVSAEGNGNRFVVIAVETSQPLPAPSPGK---DCSKVTFSGTQLRGGIEVVDVPHID 181 + +A G+G+ +V AV + P P P CS+ + + + + + D PH++ Sbjct 100 DQSAQGVSGSGSGGIVDAVVVALPEPVDFPDDLVASCSQWSETAGRTVVHVHLTDAPHVE 159 Query 182 GTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 240 G T+G V V +V G+ Y ++A GDY PG + + Q A Sbjct 160 GVDTVGMVADVKSSVESGTEIDSRTYTFTAYLGDYYAFTTLT--TDPGSALPVLPPQFAA 217 Query 241 DLLVQAVAAVRG 252 DLL + V+ +RG Sbjct 218 DLLAKTVSTLRG 229 Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust. Identities = 17/20 (85%), Positives = 17/20 (85%), Gaps = 0/20 (0%) Query 3 PPLAPQFAADLLVKTVSTLR 22 P L PQFAADLL KTVSTLR Sbjct 209 PVLPPQFAADLLAKTVSTLR 228 >gi|240169305|ref|ZP_04747964.1| hypothetical protein MkanA1_08326 [Mycobacterium kansasii ATCC 12478] Length=225 Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust. Identities = 31/96 (33%), Positives = 44/96 (46%), Gaps = 3/96 (3%) Query 158 CSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDYQ 216 C++ T S I ++D PHIDG TL V V +V G+ Y + A GDY Sbjct 132 CAQWTMSDGHTSAAIRLIDPPHIDGAPTLAMVADVRTSVESGTEIDSRTYTFIAYLGDYY 191 Query 217 VIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVRG 252 PG + + + A DLLV+ V+ +RG Sbjct 192 AFTTLT--TDPGSMLPPLPPRFAADLLVKTVSTLRG 225 Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust. Identities = 18/20 (90%), Positives = 19/20 (95%), Gaps = 0/20 (0%) Query 3 PPLAPQFAADLLVKTVSTLR 22 PPL P+FAADLLVKTVSTLR Sbjct 205 PPLPPRFAADLLVKTVSTLR 224 >gi|315442956|ref|YP_004075835.1| hypothetical protein Mspyr1_13210 [Mycobacterium sp. Spyr1] gi|315261259|gb|ADT98000.1| hypothetical protein Mspyr1_13210 [Mycobacterium sp. Spyr1] Length=219 Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust. Identities = 48/196 (25%), Positives = 83/196 (43%), Gaps = 11/196 (5%) Query 59 ASTGDIAKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQL 118 ++T + A++ + G Y +VTP P F++ L + DPA CA + A Sbjct 33 STTVNPARIDRARDGLPDGY---EVTPYTGSPAPFASWGLQESAVADPAQCATLGAPAVD 89 Query 119 PTGLQGNMAAVSAEGNGN-RFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDV 177 P +G SA G G + V+A + P +C++ + + + + Sbjct 90 PASARG----WSASGAGGIVYAVVAGAAPEATPPSQLFGECAQWSVTAGRATATVTTRPG 145 Query 178 PHIDGTQTLGVHRVLQAVVGGSARTGELYD-YSARFGDYQVIVIANPLVIPGRPVARVDT 236 P +D QT + + VV G T D + A GD+ ++ + PG P + Sbjct 146 PAVDAAQTSAMSTAITIVVEGGTETRSHADTFVAYLGDHVCYIVV--VTDPGSPHPGLAP 203 Query 237 QRARDLLVQAVAAVRG 252 + DLLV+ V+ +RG Sbjct 204 EFGSDLLVETVSTLRG 219 >gi|145222509|ref|YP_001133187.1| hypothetical protein Mflv_1919 [Mycobacterium gilvum PYR-GCK] gi|145214995|gb|ABP44399.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=184 Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust. Identities = 47/190 (25%), Positives = 79/190 (42%), Gaps = 11/190 (5%) Query 65 AKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQG 124 A++ + G Y +VTP P F++ L + DPA CA + A P +G Sbjct 4 ARIDRARDGLPDGY---EVTPYTGSPAPFASWGLQESAVADPAQCATLGAPAVDPASARG 60 Query 125 NMAAVSAEGNGN-RFVVIAVETSQPLPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHIDGT 183 SA G G + V+A + P +C++ + + + + P +D Sbjct 61 ----WSASGAGGIVYAVVAGAAPEATPPSQLFGECAQWSVTAGRATATVTTRPGPAVDAA 116 Query 184 QTLGVHRVLQAVVGGSARTGELYD-YSARFGDYQVIVIANPLVIPGRPVARVDTQRARDL 242 QT + + VV G T D + A GD+ ++ + PG P + + DL Sbjct 117 QTSAMSTAITIVVEGGTETRSHADTFVAYLGDHVCYIVV--VTDPGSPHPGLAPEFGSDL 174 Query 243 LVQAVAAVRG 252 LV+ V+ +RG Sbjct 175 LVETVSTLRG 184 >gi|254823422|ref|ZP_05228423.1| hypothetical protein MintA_26066 [Mycobacterium intracellulare ATCC 13950] Length=229 Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust. Identities = 48/191 (26%), Positives = 77/191 (41%), Gaps = 13/191 (6%) Query 65 AKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQG 124 A + + P Y V+ P A P L D PA C +A G Sbjct 47 ANIKRIIRDMPPGYEVSTAIPSAASPRVIWG--LGDDPHPKPAKCGTLAD-----PGNGR 99 Query 125 NMAAVSAEGNGNRFVVIAVETSQPLPAPSPGK---DCSKVTFSGTQLRGGIEVVDVPHID 181 + +A G+G+ +V AV + P P P C+ + + + + D PH+D Sbjct 100 DQSAQGVSGSGSGGIVNAVVVALPGPVDFPEDLLTACAHWSETAGNTVAHVHLTDAPHVD 159 Query 182 GTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRAR 240 G QT+G V V +V G+ +Y ++A GD+ PG + + + A Sbjct 160 GVQTIGMVADVKSSVESGTEIDSRVYTFTAYLGDFYAFTTLT--TDPGSALPVLPPRFAA 217 Query 241 DLLVQAVAAVR 251 DLL + V+ +R Sbjct 218 DLLAKTVSTLR 228 >gi|254773998|ref|ZP_05215514.1| hypothetical protein MaviaA2_04889 [Mycobacterium avium subsp. avium ATCC 25291] Length=229 Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust. Identities = 49/180 (28%), Positives = 73/180 (41%), Gaps = 29/180 (16%) Query 96 RKLPDGLSFDPANCAQVAAGPQLPTGLQGN-------MAAVSAEGNGN------------ 136 R LP G ++ VAA P++ GL + A ++ GNG Sbjct 54 RDLPPG--YEVTTGIPVAAAPKVIWGLAADARAKPPRCAVLADPGNGRDQSAQGVSGSGS 111 Query 137 RFVVIAVETSQPLPAPSPGKD----CSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRV 191 +V AV + P P P +D C + + + + + D PHIDG +TLG V + Sbjct 112 GGIVDAVVVALPEPVDFP-RDLLGACQQWSETAGHTTVRVRLTDGPHIDGVETLGMVADI 170 Query 192 LQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 +V G+ Y + A GDY PG V + Q A DLL + V+ +R Sbjct 171 TSSVESGTEIDSRSYTFIAYLGDYYAFTTLT--TDPGAAVPVLPPQFAADLLAKTVSTLR 228 Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust. Identities = 18/21 (86%), Positives = 18/21 (86%), Gaps = 0/21 (0%) Query 3 PPLAPQFAADLLVKTVSTLRS 23 P L PQFAADLL KTVSTLRS Sbjct 209 PVLPPQFAADLLAKTVSTLRS 229 >gi|118462648|ref|YP_880374.1| hypothetical protein MAV_1122 [Mycobacterium avium 104] gi|118163935|gb|ABK64832.1| conserved hypothetical protein [Mycobacterium avium 104] Length=220 Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust. Identities = 49/180 (28%), Positives = 73/180 (41%), Gaps = 29/180 (16%) Query 96 RKLPDGLSFDPANCAQVAAGPQLPTGLQGN-------MAAVSAEGNGN------------ 136 R LP G ++ VAA P++ GL + A ++ GNG Sbjct 45 RDLPPG--YEVTTGIPVAAAPKVIWGLAADARAKPPRCAVLADPGNGRDQSAQGVSGSGS 102 Query 137 RFVVIAVETSQPLPAPSPGKD----CSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRV 191 +V AV + P P P +D C + + + + + D PHIDG +TLG V + Sbjct 103 GGIVDAVVVALPEPVDFP-RDLLGACQQWSEAAGHTTVRVRLTDGPHIDGVETLGMVADI 161 Query 192 LQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 +V G+ Y + A GDY PG V + Q A DLL + V+ +R Sbjct 162 TSSVESGTEIDSRSYTFIAYLGDYYAFTTLT--TDPGAAVPVLPPQFAADLLAKTVSTLR 219 Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust. Identities = 18/21 (86%), Positives = 18/21 (86%), Gaps = 0/21 (0%) Query 3 PPLAPQFAADLLVKTVSTLRS 23 P L PQFAADLL KTVSTLRS Sbjct 200 PVLPPQFAADLLAKTVSTLRS 220 >gi|111023765|ref|YP_706737.1| hypothetical protein RHA1_ro06807 [Rhodococcus jostii RHA1] gi|110823295|gb|ABG98579.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=258 Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust. Identities = 62/219 (29%), Positives = 93/219 (43%), Gaps = 32/219 (14%) Query 19 STLRSSGAALGRLTTMRKA----VLAVGSVCWLVGCSSGAS-----STTASTGD-----I 64 ST+RS R T +R A V+++ +V L GCSS S STT + G + Sbjct 21 STVRS------RRTAVRTALVVPVVSLAAVTILSGCSSTVSGVAQPSTTIAAGSPSGKGL 74 Query 65 AKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQG 124 +K+ + F Y + +A+ +P G DPA+CA P G G Sbjct 75 SKLLVDPADFPARYEAIVLPAQAVSMAAPDLTGVPQGAVVDPADCAP----PAQDYGPTG 130 Query 125 NMAAVSAEGNGNRFVVIAVE---TSQPLPA-PSPGKDCSKVTF--SGTQLRGGIEVVDVP 178 + AV + N +R I+VE T PL + K C +VT SG + EV P Sbjct 131 TVMAVGTD-NASRS-TISVELTRTDTPLDELAAQTKKCGEVTVTDSGAESTVTTEVTPAP 188 Query 179 HIDGTQTLGVHRVLQAVVGGSARTGELYDYSARFGDYQV 217 + TL + R +++ G T + A+ GD +V Sbjct 189 PVRADDTLALRRTVKSGNGSDKVTQSMVTLIAQVGDVRV 227 >gi|41407037|ref|NP_959873.1| hypothetical protein MAP0939 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395388|gb|AAS03256.1| hypothetical protein MAP_0939 [Mycobacterium avium subsp. paratuberculosis K-10] Length=259 Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust. Identities = 57/196 (30%), Positives = 81/196 (42%), Gaps = 23/196 (11%) Query 65 AKVAEVKSGFGPEYTVTDVTPRAIDPGFFSARKLPDGLSFD----PANCAQVAAGPQLPT 120 A + V P Y VT P A P K+ GL+ D P CA V A P Sbjct 77 ANIKRVVRDLPPGYEVTTGIPVAAAP------KVIWGLAADARAKPPRCA-VLADP---- 125 Query 121 GLQGNMAAVSAEGNGNRFVVIAVETSQPLPAPSPGKD----CSKVTFSGTQLRGGIEVVD 176 G + +A G+G+ +V AV + P P P +D C + + + + + D Sbjct 126 GNGRDQSAQGVSGSGSGGIVDAVVVALPEPVDFP-RDLLGACQQWSETAGHTTVRVRLTD 184 Query 177 VPHIDGTQTLG-VHRVLQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVD 235 HIDG +TLG V + +V G+ Y + A GDY PG V + Sbjct 185 GSHIDGVETLGMVADITSSVESGTEIDSRSYTFIAYLGDYYAFTTLT--TDPGAAVPVLP 242 Query 236 TQRARDLLVQAVAAVR 251 Q A DLL + V+ +R Sbjct 243 PQFAADLLAKTVSTLR 258 Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/21 (86%), Positives = 18/21 (86%), Gaps = 0/21 (0%) Query 3 PPLAPQFAADLLVKTVSTLRS 23 P L PQFAADLL KTVSTLRS Sbjct 239 PVLPPQFAADLLAKTVSTLRS 259 >gi|336461386|gb|EGO40257.1| hypothetical protein MAPs_31260 [Mycobacterium avium subsp. paratuberculosis S397] Length=229 Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust. Identities = 48/180 (27%), Positives = 72/180 (40%), Gaps = 29/180 (16%) Query 96 RKLPDGLSFDPANCAQVAAGPQLPTGLQGN-------MAAVSAEGNGN------------ 136 R LP G ++ VAA P++ GL + A ++ GNG Sbjct 54 RDLPPG--YEVTTGIPVAAAPKVIWGLAADARAKPPRCAVLADPGNGRDQSAQGVSGSGS 111 Query 137 RFVVIAVETSQPLPAPSPGKD----CSKVTFSGTQLRGGIEVVDVPHIDGTQTLG-VHRV 191 +V AV + P P P +D C + + + + + D HIDG +TLG V + Sbjct 112 GGIVDAVVVALPEPVDFP-RDLLGACQQWSETAGHTTVRVRLTDGSHIDGVETLGMVADI 170 Query 192 LQAVVGGSARTGELYDYSARFGDYQVIVIANPLVIPGRPVARVDTQRARDLLVQAVAAVR 251 +V G+ Y + A GDY PG V + Q A DLL + V+ +R Sbjct 171 TSSVESGTEIDSRSYTFIAYLGDYYAFTTLT--TDPGAAVPVLPPQFAADLLAKTVSTLR 228 Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust. Identities = 18/21 (86%), Positives = 18/21 (86%), Gaps = 0/21 (0%) Query 3 PPLAPQFAADLLVKTVSTLRS 23 P L PQFAADLL KTVSTLRS Sbjct 209 PVLPPQFAADLLAKTVSTLRS 229 >gi|157963476|ref|YP_001503510.1| hypothetical protein Spea_3664 [Shewanella pealeana ATCC 700345] gi|157848476|gb|ABV88975.1| hypothetical protein Spea_3664 [Shewanella pealeana ATCC 700345] Length=855 Score = 37.0 bits (84), Expect = 3.0, Method: Composition-based stats. Identities = 43/154 (28%), Positives = 70/154 (46%), Gaps = 19/154 (12%) Query 31 LTTMRKAVLAVGSVCWLV--GCSSGASSTTASTGDIAKVAEVKSGFGPEYTVTDVTPRAI 88 + T+ A+ A G LV G + S T+S IAKV + +G +VTP + Sbjct 217 IDTVDTALTAFGERVRLVTSGGNGNDLSFTSSDEAIAKVDD--NG--------EVTP--L 264 Query 89 DPGFFSARKLPDGLSFDPANCAQVAAGPQLPTGLQGNMAAVSAEGNGNRFVVIAVETSQP 148 + G F+ R + +GL PA A+V P GL+ + NG ++ ++ Sbjct 265 NAGSFTIRVIQEGLDLIPALDAEVDLVVSNPEGLRVYLDVPVQLTNG-----VSAFSAPN 319 Query 149 LPAPSPGKDCSKVTFSGTQLRGGIEVVDVPHIDG 182 +PA GKD S TF+ ++ ++ +IDG Sbjct 320 VPAIGQGKDTSFTTFAKVSFDDKEQITELENIDG 353 >gi|116075684|ref|ZP_01472943.1| Short-chain dehydrogenase/reductase SDR [Synechococcus sp. RS9916] gi|116066999|gb|EAU72754.1| Short-chain dehydrogenase/reductase SDR [Synechococcus sp. RS9916] Length=258 Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust. Identities = 31/95 (33%), Positives = 45/95 (48%), Gaps = 7/95 (7%) Query 4 PLAPQFAAD----LLVKTVSTLRSSGAALGRLTTMRKAVLAVGSVCWLVGCSSGASSTTA 59 PLA Q ++D + V TL + AA+ LT R A++ +GSV +G S G + TT Sbjct 100 PLAEQNSSDWQELMAVNVNGTLHAVQAAIPHLTASRGAIVTLGSVSAFIGSSDGGAYTT- 158 Query 60 STGDIAKVAEVKSG--FGPEYTVTDVTPRAIDPGF 92 S G + +G V +V P +D GF Sbjct 159 SKGAVLSFTYAAAGELASRGIRVNNVAPGWVDGGF 193 Lambda K H 0.317 0.134 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 365242488240 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40