BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1000c Length=205 Score E Sequences producing significant alignments: (Bits) Value gi|15840428|ref|NP_335465.1| hypothetical protein MT1029 [Mycoba... 416 1e-114 gi|297633527|ref|ZP_06951307.1| hypothetical protein MtubK4_0536... 399 1e-109 gi|183984463|ref|YP_001852754.1| hypothetical protein MMAR_4493 ... 365 2e-99 gi|240169303|ref|ZP_04747962.1| hypothetical protein MkanA1_0831... 363 9e-99 gi|118619738|ref|YP_908070.1| hypothetical protein MUL_4665 [Myc... 362 2e-98 gi|254774000|ref|ZP_05215516.1| alkylated DNA repair protein [My... 343 7e-93 gi|342860606|ref|ZP_08717257.1| alkylated DNA repair protein [My... 343 1e-92 gi|289761136|ref|ZP_06520514.1| alkylated DNA repair protein [My... 342 2e-92 gi|336461384|gb|EGO40255.1| alkylated DNA repair protein [Mycoba... 342 2e-92 gi|296169840|ref|ZP_06851454.1| alkylated DNA repair protein [My... 336 1e-90 gi|15827000|ref|NP_301263.1| hypothetical protein ML0190 [Mycoba... 330 6e-89 gi|118464115|ref|YP_880376.1| alkylated DNA repair protein [Myco... 330 8e-89 gi|254820998|ref|ZP_05225999.1| alkylated DNA repair protein [My... 329 1e-88 gi|333989596|ref|YP_004522210.1| hypothetical protein JDM601_095... 314 4e-84 gi|108801242|ref|YP_641439.1| hypothetical protein Mmcs_4278 [My... 313 1e-83 gi|126437222|ref|YP_001072913.1| DNA-N1-methyladenine dioxygenas... 312 2e-83 gi|118472008|ref|YP_889690.1| alkylated DNA repair protein [Myco... 301 5e-80 gi|120405762|ref|YP_955591.1| hypothetical protein Mvan_4812 [My... 295 2e-78 gi|145222511|ref|YP_001133189.1| hypothetical protein Mflv_1921 ... 292 2e-77 gi|169628213|ref|YP_001701862.1| hypothetical protein MAB_1120c ... 261 3e-68 gi|300785325|ref|YP_003765616.1| alkylated DNA repair protein [A... 248 5e-64 gi|302526184|ref|ZP_07278526.1| alkylated DNA repair protein [St... 246 2e-63 gi|256391412|ref|YP_003112976.1| alkylated DNA repair protein [C... 244 4e-63 gi|345012788|ref|YP_004815142.1| alkylated DNA repair protein [S... 244 5e-63 gi|297192394|ref|ZP_06909792.1| alkylated DNA repair protein [St... 241 4e-62 gi|54025596|ref|YP_119838.1| putative alkylated DNA repair prote... 239 1e-61 gi|320007150|gb|ADW02000.1| alkylated DNA repair protein [Strept... 239 2e-61 gi|336120918|ref|YP_004575704.1| hypothetical protein MLP_52870 ... 239 2e-61 gi|84496827|ref|ZP_00995681.1| putative alkylated DNA repair pro... 238 5e-61 gi|302547579|ref|ZP_07299921.1| alkylated DNA repair protein [St... 237 6e-61 gi|297159125|gb|ADI08837.1| hypothetical protein SBI_05717 [Stre... 237 7e-61 gi|290962857|ref|YP_003494039.1| hypothetical protein SCAB_85711... 236 2e-60 gi|29827672|ref|NP_822306.1| alkylated DNA repair protein [Strep... 236 2e-60 gi|302549090|ref|ZP_07301432.1| alkylated DNA repair protein [St... 235 3e-60 gi|294634091|ref|ZP_06712646.1| alkylated DNA repair protein [St... 234 4e-60 gi|111021899|ref|YP_704871.1| hypothetical protein RHA1_ro04932 ... 234 8e-60 gi|239991466|ref|ZP_04712130.1| putative alkylated DNA repair pr... 233 1e-59 gi|329937615|ref|ZP_08287134.1| Alkylated DNA repair protein Alk... 233 2e-59 gi|226364409|ref|YP_002782191.1| hypothetical protein ROP_49990 ... 232 3e-59 gi|226308173|ref|YP_002768133.1| hypothetical protein RER_46860 ... 230 7e-59 gi|311744321|ref|ZP_07718125.1| alkylated DNA repair protein [Ae... 229 1e-58 gi|345003513|ref|YP_004806367.1| hypothetical protein SACTE_6047... 229 2e-58 gi|333920399|ref|YP_004493980.1| Alkylated DNA repair protein [A... 228 3e-58 gi|317125252|ref|YP_004099364.1| DNA-N1-methyladenine dioxygenas... 227 9e-58 gi|126348088|emb|CAJ89809.1| putative alkylated DNA repair prote... 227 1e-57 gi|21225578|ref|NP_631357.1| hypothetical protein SCO7302 [Strep... 226 1e-57 gi|238063684|ref|ZP_04608393.1| alkylated DNA repair protein [Mi... 225 3e-57 gi|284032194|ref|YP_003382125.1| putative alkylated DNA repair p... 224 5e-57 gi|256825021|ref|YP_003148981.1| DNA-N1-methyladenine dioxygenas... 223 1e-56 gi|288916587|ref|ZP_06410963.1| putative alkylated DNA repair pr... 223 2e-56 >gi|15840428|ref|NP_335465.1| hypothetical protein MT1029 [Mycobacterium tuberculosis CDC1551] gi|31792191|ref|NP_854684.1| hypothetical protein Mb1027c [Mycobacterium bovis AF2122/97] gi|57116811|ref|YP_177777.1| hypothetical protein Rv1000c [Mycobacterium tuberculosis H37Rv] 58 more sequence titles Length=205 Score = 416 bits (1068), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 205/205 (100%), Positives = 205/205 (100%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ Sbjct 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF Sbjct 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EHAVPKTSAPTGPRVSIQFRPRDVR Sbjct 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 >gi|297633527|ref|ZP_06951307.1| hypothetical protein MtubK4_05363 [Mycobacterium tuberculosis KZN 4207] gi|297730512|ref|ZP_06959630.1| hypothetical protein MtubKR_05443 [Mycobacterium tuberculosis KZN R506] gi|306806853|ref|ZP_07443521.1| hypothetical protein TMGG_03074 [Mycobacterium tuberculosis SUMu007] 17 more sequence titles Length=198 Score = 399 bits (1025), Expect = 1e-109, Method: Compositional matrix adjust. Identities = 197/198 (99%), Positives = 198/198 (100%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 +AIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD Sbjct 1 MAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT Sbjct 61 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT Sbjct 121 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 SAPTGPRVSIQFRPRDVR Sbjct 181 SAPTGPRVSIQFRPRDVR 198 >gi|183984463|ref|YP_001852754.1| hypothetical protein MMAR_4493 [Mycobacterium marinum M] gi|183177789|gb|ACC42899.1| conserved hypothetical protein [Mycobacterium marinum M] Length=205 Score = 365 bits (938), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 176/205 (86%), Positives = 189/205 (93%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLG VA AVQG+LFEHNERRQLGDGAFIDIR+ WL G++LL+AL+S VPWR+ERRQ Sbjct 1 MCDKLGAVAFAVQGSLFEHNERRQLGDGAFIDIRANWLRAGDDLLEALISRVPWRSERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVV+VPRLVSFHDL IE PPHP+LARMRRRLNDIYGGELGEPFTT GLC YRDGSDS Sbjct 61 MYDRVVEVPRLVSFHDLMIEKPPHPELARMRRRLNDIYGGELGEPFTTVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGR STEDTMVAIVSLGATR+FA+RPRG G SLRLPLAHGDLLVMGGSCQRT+ Sbjct 121 VAWHGDTIGRSSTEDTMVAIVSLGATRIFAMRPRGGGASLRLPLAHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EH+VPKTS P GPRVSIQFRPR VR Sbjct 181 EHSVPKTSTPAGPRVSIQFRPRGVR 205 >gi|240169303|ref|ZP_04747962.1| hypothetical protein MkanA1_08316 [Mycobacterium kansasii ATCC 12478] Length=198 Score = 363 bits (931), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 176/198 (89%), Positives = 188/198 (95%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 +A AVQG+LFEHNERRQLG+GAFIDIR+GWL GG++LL ALL+ VPWR+ERRQMYDRVVD Sbjct 1 MAFAVQGSLFEHNERRQLGNGAFIDIRAGWLHGGDDLLAALLAGVPWRSERRQMYDRVVD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRLVSFHDLT+EDPPHPQL R+RRRLNDIYGGELGEPFTT GLCYYRDGSDSVAWHGDT Sbjct 61 VPRLVSFHDLTVEDPPHPQLTRIRRRLNDIYGGELGEPFTTVGLCYYRDGSDSVAWHGDT 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR STEDTMVAIVSLGATRVFALRPRG G SLR PLAHGDLLVMGGSCQRT+EHAVPKT Sbjct 121 IGRSSTEDTMVAIVSLGATRVFALRPRGGGTSLRFPLAHGDLLVMGGSCQRTWEHAVPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 +APTGPRVSIQFRPRDVR Sbjct 181 TAPTGPRVSIQFRPRDVR 198 >gi|118619738|ref|YP_908070.1| hypothetical protein MUL_4665 [Mycobacterium ulcerans Agy99] gi|118571848|gb|ABL06599.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=205 Score = 362 bits (928), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 175/204 (86%), Positives = 187/204 (92%), Gaps = 0/204 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLG VA AVQG+LFEHNERRQLGDGAFIDIR+ WL G++LL+AL+S VPWR+ERRQ Sbjct 1 MCDKLGAVAFAVQGSLFEHNERRQLGDGAFIDIRANWLRAGDDLLEALISRVPWRSERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVV+VPRLVSFHDL IE PPHP+LARMRRRLNDIYGGELGEPFTT GLC YRDG DS Sbjct 61 MYDRVVEVPRLVSFHDLMIEKPPHPELARMRRRLNDIYGGELGEPFTTVGLCCYRDGFDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGR STEDTMVAIVSLGATR+FALRPRG G SLRLPLAHGDLLVMGGSCQRT+ Sbjct 121 VAWHGDTIGRSSTEDTMVAIVSLGATRIFALRPRGGGASLRLPLAHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDV 204 EH+VPKTS P GPRVSIQFRPR V Sbjct 181 EHSVPKTSTPAGPRVSIQFRPRGV 204 >gi|254774000|ref|ZP_05215516.1| alkylated DNA repair protein [Mycobacterium avium subsp. avium ATCC 25291] Length=205 Score = 343 bits (881), Expect = 7e-93, Method: Compositional matrix adjust. Identities = 174/205 (85%), Positives = 188/205 (92%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLG V IAVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LLDALLSTVPWR ERRQ Sbjct 1 MCDKLGRVEIAVQGSLFQHTERRQLGDGAFIEIRAGWLTDADDLLDALLSTVPWREERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLT+++PPHP L+R+RRRLNDIY GELGEPFTT GLC YRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTVDEPPHPMLSRLRRRLNDIYAGELGEPFTTVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGR S+EDTMVAIVSLGATR FALR RG GPSLRLP AHGDLLVMGGSCQRT+ Sbjct 121 VAWHGDTIGRSSSEDTMVAIVSLGATRAFALRRRGGGPSLRLPQAHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EHAVPKT+AP GPRVSIQFRPR VR Sbjct 181 EHAVPKTTAPVGPRVSIQFRPRGVR 205 >gi|342860606|ref|ZP_08717257.1| alkylated DNA repair protein [Mycobacterium colombiense CECT 3035] gi|342132261|gb|EGT85502.1| alkylated DNA repair protein [Mycobacterium colombiense CECT 3035] Length=205 Score = 343 bits (879), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 173/205 (85%), Positives = 187/205 (92%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKL V IAVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LLDALLSTVPWR ERRQ Sbjct 1 MCDKLASVEIAVQGSLFQHTERRQLGDGAFIEIRAGWLTDADDLLDALLSTVPWREERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLT++DPPHP+LAR+RRRLNDIY GELGEPFTT GLC YRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTVDDPPHPELARLRRRLNDIYAGELGEPFTTVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGR S+EDTMVAIVSLGATR FA+R RG GPSLRLP AHGDLLVMGGSCQRT+ Sbjct 121 VAWHGDTIGRSSSEDTMVAIVSLGATRSFAMRRRGGGPSLRLPQAHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EHAVPKT+A GPRVSIQFRPR VR Sbjct 181 EHAVPKTTASVGPRVSIQFRPRGVR 205 >gi|289761136|ref|ZP_06520514.1| alkylated DNA repair protein [Mycobacterium tuberculosis GM 1503] gi|289708642|gb|EFD72658.1| alkylated DNA repair protein [Mycobacterium tuberculosis GM 1503] Length=169 Score = 342 bits (878), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ Sbjct 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDL 169 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDL Sbjct 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDL 169 >gi|336461384|gb|EGO40255.1| alkylated DNA repair protein [Mycobacterium avium subsp. paratuberculosis S397] Length=205 Score = 342 bits (877), Expect = 2e-92, Method: Compositional matrix adjust. Identities = 173/205 (85%), Positives = 188/205 (92%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKLG V IAVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LLDALLSTVPWR ERRQ Sbjct 1 MCDKLGRVEIAVQGSLFQHTERRQLGDGAFIEIRAGWLTDADDLLDALLSTVPWREERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLT+++PPHP L+R+RRRLNDIY GELGEPFTT GLC YRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTVDEPPHPMLSRLRRRLNDIYAGELGEPFTTVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDTIGR S+EDTMVAIVSLGATR FALR RG GPSLRLP AHGDLLV+GGSCQRT+ Sbjct 121 VAWHGDTIGRSSSEDTMVAIVSLGATRAFALRRRGGGPSLRLPQAHGDLLVIGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EHAVPKT+AP GPRVSIQFRPR VR Sbjct 181 EHAVPKTTAPVGPRVSIQFRPRGVR 205 >gi|296169840|ref|ZP_06851454.1| alkylated DNA repair protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895517|gb|EFG75217.1| alkylated DNA repair protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=208 Score = 336 bits (861), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 170/208 (82%), Positives = 186/208 (90%), Gaps = 3/208 (1%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCD+L V +AVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LL+ALLS VPWR ERRQ Sbjct 1 MCDRLAAVEMAVQGSLFQHTERRQLGDGAFIEIRAGWLTAADDLLEALLSDVPWREERRQ 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDRVVDVPRLVSFHDLTI++PPHP L R+RRRLNDIY GELGEPFTT GLC YRDGSDS Sbjct 61 MYDRVVDVPRLVSFHDLTIDEPPHPLLGRLRRRLNDIYAGELGEPFTTVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRG---RGPSLRLPLAHGDLLVMGGSCQ 177 VAWHGDTIGRGS+EDTMVAIVSLGATR FA+R R RGPSLRLP AHGDLLVMGGSCQ Sbjct 121 VAWHGDTIGRGSSEDTMVAIVSLGATRTFAMRRRARLSRGPSLRLPQAHGDLLVMGGSCQ 180 Query 178 RTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 RT+EHAVPKTSAP GPR+SIQFRPR VR Sbjct 181 RTWEHAVPKTSAPVGPRISIQFRPRGVR 208 >gi|15827000|ref|NP_301263.1| hypothetical protein ML0190 [Mycobacterium leprae TN] gi|221229478|ref|YP_002502894.1| hypothetical protein MLBr_00190 [Mycobacterium leprae Br4923] gi|13092547|emb|CAC29698.1| conserved hypothetical protein [Mycobacterium leprae] gi|219932585|emb|CAR70283.1| conserved hypothetical protein [Mycobacterium leprae Br4923] Length=205 Score = 330 bits (847), Expect = 6e-89, Method: Compositional matrix adjust. Identities = 166/204 (82%), Positives = 183/204 (90%), Gaps = 0/204 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCD L V IA QG+LFE++ERRQLGDGAFI++RSGWLT G ELLD LLS VPWR ERR+ Sbjct 1 MCDMLVDVGIAFQGSLFEYHERRQLGDGAFIELRSGWLTDGVELLDTLLSEVPWRIERRR 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYD+VV+VPRLVSFHDLT +DPPHP L R+RRRLNDIY GELGEPFT+ GLC YRDGSDS Sbjct 61 MYDKVVNVPRLVSFHDLTTDDPPHPLLTRLRRRLNDIYAGELGEPFTSVGLCCYRDGSDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 +AWHGDTIGR S+EDTMVAI+SLGATRVFALR RG GPSLRLPL HGDLLVMGGSCQRT+ Sbjct 121 IAWHGDTIGRNSSEDTMVAIISLGATRVFALRKRGGGPSLRLPLTHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDV 204 EH+VPKTSA TGPRVSIQFRPR+V Sbjct 181 EHSVPKTSASTGPRVSIQFRPRNV 204 >gi|118464115|ref|YP_880376.1| alkylated DNA repair protein [Mycobacterium avium 104] gi|118165402|gb|ABK66299.1| alkylated DNA repair protein [Mycobacterium avium 104] Length=198 Score = 330 bits (846), Expect = 8e-89, Method: Compositional matrix adjust. Identities = 167/198 (85%), Positives = 182/198 (92%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 + IAVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LLDALLSTVPWR ERRQMYDRVVD Sbjct 1 MEIAVQGSLFQHTERRQLGDGAFIEIRAGWLTDADDLLDALLSTVPWREERRQMYDRVVD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRLVSFHDLT+++PPHP L+R+RRRLNDIY GELGEPFTT GLC YRDGSDSVAWHGDT Sbjct 61 VPRLVSFHDLTVDEPPHPMLSRLRRRLNDIYAGELGEPFTTVGLCCYRDGSDSVAWHGDT 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR S+EDTMVAIVSLGATR FALR RG GPSLRLP AHGDLLVMGGSCQRT+EHAVPKT Sbjct 121 IGRSSSEDTMVAIVSLGATRAFALRRRGGGPSLRLPQAHGDLLVMGGSCQRTWEHAVPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 +AP GPRVSIQFRPR VR Sbjct 181 TAPVGPRVSIQFRPRGVR 198 >gi|254820998|ref|ZP_05225999.1| alkylated DNA repair protein [Mycobacterium intracellulare ATCC 13950] Length=198 Score = 329 bits (844), Expect = 1e-88, Method: Compositional matrix adjust. Identities = 166/198 (84%), Positives = 181/198 (92%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 + +AVQG+LF+H ERRQLGDGAFI+IR+GWLT ++LLDALLSTVPWR ERRQMYDRVVD Sbjct 1 MEVAVQGSLFQHTERRQLGDGAFIEIRAGWLTDADDLLDALLSTVPWREERRQMYDRVVD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRLVSFHDLT++DPPHP L R+RRRLNDIY GELGEPFTT GLC YRDGSDSVAWHGDT Sbjct 61 VPRLVSFHDLTVDDPPHPMLTRLRRRLNDIYAGELGEPFTTVGLCCYRDGSDSVAWHGDT 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR S+EDTMVAIVSLGATR FA+R RG GPSLRLP AHGDLLVMGGSCQRT+EHAVPKT Sbjct 121 IGRSSSEDTMVAIVSLGATRAFAMRRRGGGPSLRLPQAHGDLLVMGGSCQRTWEHAVPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 +AP GPRVSIQFRPR VR Sbjct 181 AAPVGPRVSIQFRPRGVR 198 >gi|333989596|ref|YP_004522210.1| hypothetical protein JDM601_0956 [Mycobacterium sp. JDM601] gi|333485564|gb|AEF34956.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=205 Score = 314 bits (805), Expect = 4e-84, Method: Compositional matrix adjust. Identities = 148/205 (73%), Positives = 175/205 (86%), Gaps = 0/205 (0%) Query 1 MCDKLGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 MCDKL VA+ VQ +LF+ +ERRQLGDGA++D+R W+T G +L+ L S VPWRAERR+ Sbjct 1 MCDKLAAVAVPVQESLFDLSERRQLGDGAWLDVRPNWVTEGTDLVAELRSAVPWRAERRR 60 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDR++DVPRLVSFHDL D PHP ++R+RRRLNDIY GELGEPF T GLC YRDG+DS Sbjct 61 MYDRLLDVPRLVSFHDLAAGDAPHPAVSRLRRRLNDIYAGELGEPFATVGLCLYRDGNDS 120 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDT+GRG+T+DTMVAIVS+GATR FALRPRG G +LRL HGDLLVMGGSCQRT+ Sbjct 121 VAWHGDTLGRGATQDTMVAIVSVGATRTFALRPRGGGTALRLSQHHGDLLVMGGSCQRTW 180 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EH++PKT+AP GPR+SIQFRPR VR Sbjct 181 EHSIPKTAAPVGPRISIQFRPRGVR 205 >gi|108801242|ref|YP_641439.1| hypothetical protein Mmcs_4278 [Mycobacterium sp. MCS] gi|119870393|ref|YP_940345.1| hypothetical protein Mkms_4364 [Mycobacterium sp. KMS] gi|108771661|gb|ABG10383.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696482|gb|ABL93555.1| conserved hypothetical protein [Mycobacterium sp. KMS] Length=198 Score = 313 bits (801), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 148/198 (75%), Positives = 171/198 (87%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 + +A+QG+LFEH ERR LG+GA++D+RSGWLT + L D L +PWRAERRQMYDRV+D Sbjct 1 MELALQGSLFEHAERRTLGNGAWLDVRSGWLTDADALFDELRERIPWRAERRQMYDRVLD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRL+SFH+L ++ PHP+L +MRRRLND YGGELGEPFTTAGLC YRDG+DSVAWHGD Sbjct 61 VPRLLSFHNLVEDEAPHPRLKQMRRRLNDTYGGELGEPFTTAGLCLYRDGNDSVAWHGDN 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR S EDTMVAIV LGATRVFALRPRG GPSLR+ HGDLLVMGGSCQRT+EHA+PKT Sbjct 121 IGRSSREDTMVAIVGLGATRVFALRPRGGGPSLRIQHHHGDLLVMGGSCQRTWEHAIPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 + PTGPR+SIQFRP DVR Sbjct 181 TRPTGPRISIQFRPHDVR 198 >gi|126437222|ref|YP_001072913.1| DNA-N1-methyladenine dioxygenase [Mycobacterium sp. JLS] gi|126237022|gb|ABO00423.1| DNA-N1-methyladenine dioxygenase [Mycobacterium sp. JLS] Length=198 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 147/198 (75%), Positives = 171/198 (87%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 + +A+QG+LFEH ERR LG+GA++D+RSGWLT + L D L +PWRAERRQMYDR++D Sbjct 1 MELALQGSLFEHAERRTLGNGAWLDVRSGWLTDADTLFDELRERIPWRAERRQMYDRMLD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRL+SFH+L ++ PHP+L +MRRRLND YGGELGEPFTTAGLC YRDG+DSVAWHGD Sbjct 61 VPRLLSFHNLVEDEAPHPRLKQMRRRLNDTYGGELGEPFTTAGLCLYRDGNDSVAWHGDN 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR S EDTMVAIV LGATRVFALRPRG GPSLR+ HGDLLVMGGSCQRT+EHA+PKT Sbjct 121 IGRSSREDTMVAIVGLGATRVFALRPRGGGPSLRIQHHHGDLLVMGGSCQRTWEHAIPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 + PTGPR+SIQFRP DVR Sbjct 181 TRPTGPRISIQFRPHDVR 198 >gi|118472008|ref|YP_889690.1| alkylated DNA repair protein [Mycobacterium smegmatis str. MC2 155] gi|118173295|gb|ABK74191.1| alkylated DNA repair protein [Mycobacterium smegmatis str. MC2 155] Length=198 Score = 301 bits (770), Expect = 5e-80, Method: Compositional matrix adjust. Identities = 145/198 (74%), Positives = 167/198 (85%), Gaps = 0/198 (0%) Query 8 VAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVD 67 + +AVQG+LFEH ERR LG+GA+I++RSGWL + L + L+ T+PWRAE+R+MYDRVVD Sbjct 1 MELAVQGSLFEHAERRPLGNGAWIELRSGWLADADSLFEELMDTIPWRAEQREMYDRVVD 60 Query 68 VPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDT 127 VPRLVSFH+L E PHP+L ++RRRLND YG ELGEPFTTAGLC YRDG DSVAWHGDT Sbjct 61 VPRLVSFHNLVDEPAPHPRLKQIRRRLNDTYGRELGEPFTTAGLCLYRDGDDSVAWHGDT 120 Query 128 IGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKT 187 IGR T DTMVAIVSLGATRVFALRPRG G +LRL HGDLLVMGGSCQRT+EH+VPKT Sbjct 121 IGRSRTRDTMVAIVSLGATRVFALRPRGGGHALRLQQQHGDLLVMGGSCQRTWEHSVPKT 180 Query 188 SAPTGPRVSIQFRPRDVR 205 S GPR+SIQFRP +VR Sbjct 181 SRLIGPRISIQFRPHNVR 198 >gi|120405762|ref|YP_955591.1| hypothetical protein Mvan_4812 [Mycobacterium vanbaalenii PYR-1] gi|119958580|gb|ABM15585.1| DNA-N1-methyladenine dioxygenase [Mycobacterium vanbaalenii PYR-1] Length=202 Score = 295 bits (756), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 144/199 (73%), Positives = 164/199 (83%), Gaps = 4/199 (2%) Query 11 AVQGALFEHNERRQLGDGAFIDIRSGWLT----GGEELLDALLSTVPWRAERRQMYDRVV 66 A+Q ALF+H+ERR LGDGA++++RSGWL+ + L L +PWRAERRQMYDRV+ Sbjct 4 ALQSALFDHSERRDLGDGAWLEVRSGWLSQDGAADDALFGELRDQIPWRAERRQMYDRVL 63 Query 67 DVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGD 126 +VPRLVSFH+L PHP+L ++RRRLND Y GELGEPF TAGLC YRDG DSVAWHGD Sbjct 64 NVPRLVSFHNLVDAAAPHPRLKQLRRRLNDAYAGELGEPFVTAGLCLYRDGDDSVAWHGD 123 Query 127 TIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPK 186 IGR STEDTMVAIVSLGATRVFALRPRG GPSLR+ HGDLLVMGGSCQRT+EHAVPK Sbjct 124 NIGRSSTEDTMVAIVSLGATRVFALRPRGGGPSLRIRHCHGDLLVMGGSCQRTWEHAVPK 183 Query 187 TSAPTGPRVSIQFRPRDVR 205 T+ P GPR+SIQFRP DVR Sbjct 184 TARPVGPRISIQFRPHDVR 202 >gi|145222511|ref|YP_001133189.1| hypothetical protein Mflv_1921 [Mycobacterium gilvum PYR-GCK] gi|315442958|ref|YP_004075837.1| DNA-N1-methyladenine dioxygenase [Mycobacterium sp. Spyr1] gi|145214997|gb|ABP44401.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] gi|315261261|gb|ADT98002.1| DNA-N1-methyladenine dioxygenase [Mycobacterium sp. Spyr1] Length=202 Score = 292 bits (748), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 142/199 (72%), Positives = 165/199 (83%), Gaps = 4/199 (2%) Query 11 AVQGALFEHNERRQLGDGAFIDIRSGWLT----GGEELLDALLSTVPWRAERRQMYDRVV 66 A+Q +LFE ++RR LG+GA++++RSGWL+ + L L +PWRAERRQMYDRV+ Sbjct 4 ALQSSLFEQSDRRDLGNGAWLEVRSGWLSQDGSSDDTLFAELRDRIPWRAERRQMYDRVL 63 Query 67 DVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGD 126 DVPRLVSFH+L + PHP+L ++RRRLND+Y GELGEPF TAGLC YRDG DSVAWHGD Sbjct 64 DVPRLVSFHNLLDGNAPHPRLKQLRRRLNDVYAGELGEPFVTAGLCLYRDGDDSVAWHGD 123 Query 127 TIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPK 186 IGR STEDTMVAIV +GATRVFALRPRG GPSLRL HGDLLVMGGSCQRT+EHAVPK Sbjct 124 NIGRSSTEDTMVAIVGIGATRVFALRPRGGGPSLRLRHCHGDLLVMGGSCQRTWEHAVPK 183 Query 187 TSAPTGPRVSIQFRPRDVR 205 T+ PTGPR+SIQFRP DVR Sbjct 184 TTRPTGPRISIQFRPHDVR 202 >gi|169628213|ref|YP_001701862.1| hypothetical protein MAB_1120c [Mycobacterium abscessus ATCC 19977] gi|169240180|emb|CAM61208.1| Conserved hypothetical protein (alkylated DNA repair protein?) [Mycobacterium abscessus] Length=200 Score = 261 bits (668), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 131/197 (67%), Positives = 153/197 (78%), Gaps = 2/197 (1%) Query 11 AVQGALFEHNE--RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDV 68 AVQ +LF RR+L GA++++ WL + L+ LL+ VPWRAERR+MYDR +DV Sbjct 4 AVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRTLDV 63 Query 69 PRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTI 128 PRLVSFHDLT PPHP L + RLN Y ELGEPFTT GLC YRDG+DSVAWHGDTI Sbjct 64 PRLVSFHDLTSGPPPHPVLETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHGDTI 123 Query 129 GRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTS 188 GRG EDTMVAIVS+GATR FALRPR G S+R+ + HGDLLVMGGSCQRT+EHA+PKTS Sbjct 124 GRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIGHGDLLVMGGSCQRTWEHAIPKTS 183 Query 189 APTGPRVSIQFRPRDVR 205 P GPR+S+Q+RPRDVR Sbjct 184 KPVGPRISLQYRPRDVR 200 >gi|300785325|ref|YP_003765616.1| alkylated DNA repair protein [Amycolatopsis mediterranei U32] gi|299794839|gb|ADJ45214.1| putative alkylated DNA repair protein [Amycolatopsis mediterranei U32] gi|340526769|gb|AEK41974.1| alkylated DNA repair protein [Amycolatopsis mediterranei S699] Length=208 Score = 248 bits (632), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 122/184 (67%), Positives = 144/184 (79%), Gaps = 1/184 (0%) Query 22 RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIED 81 R +LG GA++D++ GWL G +E+ L++ VPW+AERR+MYDR VDVPRL+ F+ Sbjct 26 RTELGSGAWVDVQPGWLAGADEVFADLVTGVPWQAERRRMYDRFVDVPRLLCFYR-EAAP 84 Query 82 PPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIV 141 PHP LA R L++ Y GELGEPF TAGLCYYRDG DSVAWHGDTIGRGSTEDTMVAI+ Sbjct 85 LPHPVLAAARTALSEHYAGELGEPFRTAGLCYYRDGRDSVAWHGDTIGRGSTEDTMVAIL 144 Query 142 SLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRP 201 S+GA R ALRPRG G S R L HGDL+VMGGSCQRT+EHA+PKT+ GPR+SIQFRP Sbjct 145 SVGAARQLALRPRGGGESHRYALGHGDLIVMGGSCQRTWEHAIPKTNRAAGPRISIQFRP 204 Query 202 RDVR 205 R VR Sbjct 205 RGVR 208 >gi|302526184|ref|ZP_07278526.1| alkylated DNA repair protein [Streptomyces sp. AA4] gi|302435079|gb|EFL06895.1| alkylated DNA repair protein [Streptomyces sp. AA4] Length=208 Score = 246 bits (627), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 127/206 (62%), Positives = 147/206 (72%), Gaps = 12/206 (5%) Query 11 AVQGALFEHN-----------ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERR 59 A QG+LF + +R +LG GA+ID+ GWL G +EL + L + VPW AERR Sbjct 4 AFQGSLFGASGPATLGPLSGVQRTELGQGAWIDVLPGWLEGSDELYEHLAAEVPWYAERR 63 Query 60 QMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSD 119 QMYDRVV VPRL+ F+ PHP L R L+ Y ELGEPF TAGLCYYRDG D Sbjct 64 QMYDRVVAVPRLLCFYR-EHAPLPHPVLTEAREALSAHYAAELGEPFRTAGLCYYRDGQD 122 Query 120 SVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRT 179 SVAWHGD +GRG TEDTMVAI+S+GA R ALRPRG G SLR PL HGDL+VMGGSCQRT Sbjct 123 SVAWHGDDLGRGRTEDTMVAILSVGAARHLALRPRGGGESLRYPLGHGDLIVMGGSCQRT 182 Query 180 FEHAVPKTSAPTGPRVSIQFRPRDVR 205 +EHA+PKT+ GPR+SIQFRPR VR Sbjct 183 WEHAIPKTARAVGPRISIQFRPRGVR 208 >gi|256391412|ref|YP_003112976.1| alkylated DNA repair protein [Catenulispora acidiphila DSM 44928] gi|256357638|gb|ACU71135.1| putative alkylated DNA repair protein [Catenulispora acidiphila DSM 44928] Length=212 Score = 244 bits (624), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 124/193 (65%), Positives = 147/193 (77%), Gaps = 2/193 (1%) Query 14 GALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVS 73 GAL ER +L DGA++D+R GW++G +EL L+ TVPWRAERR+MY+R+VDVPRL+ Sbjct 21 GALGTTVERVRLTDGAWVDLRRGWISGADELFARLMETVPWRAERRKMYERIVDVPRLLC 80 Query 74 FHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGST 133 F+ E P P L R L+ Y ELGEPFTTAGLC YRDG DSVAWHGDTIGRGS+ Sbjct 81 FY-ADGEPLPDPLLTEARATLDHHYAPELGEPFTTAGLCLYRDGKDSVAWHGDTIGRGSS 139 Query 134 EDTMVAIVSLGATRVFALRPR-GRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTG 192 +DTMVAI+SLG R ALRPR G P LR + HGDLLVMGGSCQRT+EHAVPK++ P G Sbjct 140 QDTMVAILSLGTPRTLALRPRNGAAPPLRYEVGHGDLLVMGGSCQRTWEHAVPKSARPLG 199 Query 193 PRVSIQFRPRDVR 205 PR+S+QFRPR VR Sbjct 200 PRISVQFRPRGVR 212 >gi|345012788|ref|YP_004815142.1| alkylated DNA repair protein [Streptomyces violaceusniger Tu 4113] gi|344039137|gb|AEM84862.1| alkylated DNA repair protein [Streptomyces violaceusniger Tu 4113] Length=208 Score = 244 bits (623), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 124/205 (61%), Positives = 151/205 (74%), Gaps = 14/205 (6%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ E R +LG G +ID+ GWL G ++L L++ VPW+AERR Sbjct 5 LQGSLFDQTEDIGLGSLRGMRRTELGSGVWIDLLPGWLRGADDLFSRLVAEVPWKAERRH 64 Query 61 MYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSD 119 MY++VVDVPRL++F+ EDP PHP L+ R L+ Y ELGEPFTTAGLCYYRDG D Sbjct 65 MYEQVVDVPRLLAFYG--AEDPLPHPVLSEAREALSTYYATELGEPFTTAGLCYYRDGRD 122 Query 120 SVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRT 179 SVAWHGD IGRG TEDT+VAI+S+GA R LRPRG G ++R PL HGDLLVMGGSCQRT Sbjct 123 SVAWHGDRIGRGRTEDTLVAILSVGAPRDLLLRPRGGGSAMRRPLGHGDLLVMGGSCQRT 182 Query 180 FEHAVPKTSAPTGPRVSIQFRPRDV 204 +EHA+PK+S TGPR+SIQFRP V Sbjct 183 WEHAIPKSSRATGPRISIQFRPSGV 207 >gi|297192394|ref|ZP_06909792.1| alkylated DNA repair protein [Streptomyces pristinaespiralis ATCC 25486] gi|197723458|gb|EDY67366.1| alkylated DNA repair protein [Streptomyces pristinaespiralis ATCC 25486] Length=209 Score = 241 bits (616), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 129/211 (62%), Positives = 153/211 (73%), Gaps = 15/211 (7%) Query 8 VAIAVQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRA 56 +A +QG+LF+ + R LGDGA+ID+ GWL G + L D L+ +VPWRA Sbjct 1 MAAHLQGSLFDQTDEIRLGPLGDARRTVLGDGAWIDVLPGWLCGADALFDELVGSVPWRA 60 Query 57 ERRQMYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYR 115 ERRQMY+RVVDVPRL++F+ DP PHP L R L+ Y ELGEPF TAGLCYYR Sbjct 61 ERRQMYERVVDVPRLLAFYGAG--DPLPHPVLVEGREALSRHYAEELGEPFRTAGLCYYR 118 Query 116 DGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRP-RGRGPSLRLPLAHGDLLVMGG 174 DG DSVAWHGDTIGRGS EDTMVAI+S+GA R ALRP RG G +R L HGDL+VMGG Sbjct 119 DGRDSVAWHGDTIGRGSREDTMVAILSVGAPRELALRPRRGGGAQVRKALGHGDLIVMGG 178 Query 175 SCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 SCQRT+EHAV KT+ P GPR+SIQ+RP+ VR Sbjct 179 SCQRTWEHAVLKTARPVGPRISIQYRPQGVR 209 >gi|54025596|ref|YP_119838.1| putative alkylated DNA repair protein [Nocardia farcinica IFM 10152] gi|54017104|dbj|BAD58474.1| putative alkylated DNA repair protein [Nocardia farcinica IFM 10152] Length=210 Score = 239 bits (611), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 123/183 (68%), Positives = 138/183 (76%), Gaps = 1/183 (0%) Query 22 RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIED 81 R LG GA+ID+ GWLTG + L D L+ VPW+AERR MYDRVVDVPRL+ + E Sbjct 28 RTILGRGAWIDLLPGWLTGADILFDRLVRDVPWQAERRPMYDRVVDVPRLLCHYPEQAEL 87 Query 82 PPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIV 141 P P L+ R L++ Y ELGEPF TAGLC+YRDG DSVAWHGDTIGRG T DTMVAIV Sbjct 88 P-DPVLSEARAALSEHYAAELGEPFRTAGLCFYRDGRDSVAWHGDTIGRGGTHDTMVAIV 146 Query 142 SLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRP 201 SLGA R ALRPRG G SLR + HGDLLVMGGSCQRT+EHAVPKT P GPR+S+QFRP Sbjct 147 SLGAPRALALRPRGGGTSLRFEVGHGDLLVMGGSCQRTWEHAVPKTRKPVGPRISVQFRP 206 Query 202 RDV 204 R V Sbjct 207 RGV 209 >gi|320007150|gb|ADW02000.1| alkylated DNA repair protein [Streptomyces flavogriseus ATCC 33331] Length=214 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 124/213 (59%), Positives = 152/213 (72%), Gaps = 12/213 (5%) Query 4 KLGGVAIAVQGALFEHNERRQLG-----------DGAFIDIRSGWLTGGEELLDALLSTV 52 +L G+++ +QG+LF+ +R LG DGA+ID+ GWL+G +EL L V Sbjct 3 RLVGMSVHLQGSLFDQADRPHLGRLTGLRRTVLGDGAWIDLLPGWLSGADELFSVLAEGV 62 Query 53 PWRAERRQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLC 112 PWRAERRQMYDR VDVPRL++F+ +D P P L R L+ YG ELGEPFTTAGLC Sbjct 63 PWRAERRQMYDRTVDVPRLLAFYRAD-DDLPSPVLDEARDALSRHYGDELGEPFTTAGLC 121 Query 113 YYRDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVM 172 YYRDG DSVAWHGD GR S +DTMVAI+SLGA R LRP G ++R PL HGDL+VM Sbjct 122 YYRDGRDSVAWHGDLTGRSSHQDTMVAILSLGAPRDLLLRPCRGGATVRRPLGHGDLIVM 181 Query 173 GGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 GGSCQRT++HAVPKT+ GPR+S+Q+RPR VR Sbjct 182 GGSCQRTWQHAVPKTAQARGPRISVQYRPRGVR 214 >gi|336120918|ref|YP_004575704.1| hypothetical protein MLP_52870 [Microlunatus phosphovorus NM-1] gi|334688716|dbj|BAK38301.1| hypothetical protein MLP_52870 [Microlunatus phosphovorus NM-1] Length=210 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 126/207 (61%), Positives = 151/207 (73%), Gaps = 14/207 (6%) Query 11 AVQGALFEHNE------------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAER 58 A+QG+LFE + R +LG GA++D+ GWL +E+ D LL + W+AER Sbjct 6 ALQGSLFELDTEPGLGPLSDLVVRHELGRGAWVDLLPGWLGCADEVYDRLLG-IDWQAER 64 Query 59 RQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGS 118 RQMY+R+VDVPRL+ F+ E PHP L RR LN+ Y ELGEPF TAGLC YR+G Sbjct 65 RQMYERMVDVPRLLRFYG-EEERLPHPTLDLARRALNEHYAAELGEPFMTAGLCLYRNGR 123 Query 119 DSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQR 178 DSVAWHGDTIGRG +EDTMVAIVSLG+ R F LRPRG G ++R L HGDL+VMGGSCQR Sbjct 124 DSVAWHGDTIGRGRSEDTMVAIVSLGSAREFLLRPRGGGATIRHRLGHGDLIVMGGSCQR 183 Query 179 TFEHAVPKTSAPTGPRVSIQFRPRDVR 205 T+EHAVPKT+ P GPRVS+QFRPR VR Sbjct 184 TWEHAVPKTARPVGPRVSVQFRPRGVR 210 >gi|84496827|ref|ZP_00995681.1| putative alkylated DNA repair protein [Janibacter sp. HTCC2649] gi|84383595|gb|EAP99476.1| putative alkylated DNA repair protein [Janibacter sp. HTCC2649] Length=207 Score = 238 bits (606), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 118/208 (57%), Positives = 148/208 (72%), Gaps = 11/208 (5%) Query 8 VAIAVQGALFEHNERRQLGD----------GAFIDIRSGWLTGGEELLDALLSTVPWRAE 57 +A A+Q +LF+ + LG GA++D + WLTG + L D L VPW+AE Sbjct 1 MAAALQHSLFDTGDAIDLGALAPNRTILSRGAWVDYQPSWLTGADLLFDTLHDDVPWKAE 60 Query 58 RRQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDG 117 RR+MY+R+VDVPRL+ F++ E PHP L + R+ L+D Y GELGEPF TAG+C YRDG Sbjct 61 RREMYERIVDVPRLLKFYE-EGEVLPHPVLMQARKTLSDTYAGELGEPFVTAGMCLYRDG 119 Query 118 SDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQ 177 DSVAWHGD IGR +DTMVAI+S+G+ R LRPRG G SL L HGDL+VMGGSCQ Sbjct 120 RDSVAWHGDRIGRAKDQDTMVAILSVGSARSLMLRPRGGGSSLGFSLGHGDLVVMGGSCQ 179 Query 178 RTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 RT++HA+PKTS P GPR+SIQFRPR +R Sbjct 180 RTWDHAIPKTSKPVGPRISIQFRPRGIR 207 >gi|302547579|ref|ZP_07299921.1| alkylated DNA repair protein [Streptomyces hygroscopicus ATCC 53653] gi|302465197|gb|EFL28290.1| alkylated DNA repair protein [Streptomyces himastatinicus ATCC 53653] Length=208 Score = 237 bits (605), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 122/205 (60%), Positives = 147/205 (72%), Gaps = 12/205 (5%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R +L DGA+ID+ SGWL+G + L L + VPW+AERR+ Sbjct 5 LQGSLFDQADTIGLGPLHGVRRTELRDGAWIDVLSGWLSGADTLFARLATEVPWKAERRR 64 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDR V VPRL++F+ + PHP LA R L+ Y ELGEPF TAGLCYYRDG DS Sbjct 65 MYDRTVQVPRLLAFYGAD-DALPHPVLAEARDALSAHYAAELGEPFATAGLCYYRDGHDS 123 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGD GRG EDTMVAI+S+GA R LRPRG G ++R PL HGDLLVMGGSCQRT+ Sbjct 124 VAWHGDRTGRGRREDTMVAILSVGAPRDLLLRPRGGGATVRRPLGHGDLLVMGGSCQRTW 183 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 EHA+PKTS TGPR+S+QFRP VR Sbjct 184 EHAIPKTSRTTGPRISVQFRPAGVR 208 >gi|297159125|gb|ADI08837.1| hypothetical protein SBI_05717 [Streptomyces bingchenggensis BCW-1] Length=211 Score = 237 bits (605), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 123/205 (60%), Positives = 148/205 (73%), Gaps = 14/205 (6%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R LGDGA+ID+ GWL+G + L L VPWRAERR Sbjct 8 LQGSLFDQADDIRLGPLGDMRRTALGDGAWIDLLPGWLSGADALFTRLADEVPWRAERRH 67 Query 61 MYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSD 119 MYD+VVDVPRL++F+ +DP PHP L R L+ Y ELGEPFTTAGLCYYRDG D Sbjct 68 MYDQVVDVPRLLAFY--GADDPLPHPVLDEARAALSAHYAVELGEPFTTAGLCYYRDGRD 125 Query 120 SVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRT 179 SVAWHGD IGRG+ EDTMVAI+S+GA R LRPR G +R PL HGDL+VMGGSCQRT Sbjct 126 SVAWHGDRIGRGAREDTMVAILSVGAPRDLVLRPRHGGAGVRQPLGHGDLIVMGGSCQRT 185 Query 180 FEHAVPKTSAPTGPRVSIQFRPRDV 204 +EHA+PK++ TGPR+SIQFRP +V Sbjct 186 WEHAIPKSTRATGPRISIQFRPHNV 210 >gi|290962857|ref|YP_003494039.1| hypothetical protein SCAB_85711 [Streptomyces scabiei 87.22] gi|260652383|emb|CBG75516.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length=208 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 122/210 (59%), Positives = 151/210 (72%), Gaps = 14/210 (6%) Query 8 VAIAVQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRA 56 +A +QG+LF+ ++ RR+LG GA+ID+ GW+TG + L L VPW+A Sbjct 1 MATHLQGSLFDQSDDLRLGPLDGLRRRELGAGAWIDLLPGWVTGADALFTRLAEEVPWKA 60 Query 57 ERRQMYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYR 115 ERRQMY++VVDVPRL++ EDP PHP L R L+ YG ELGEPF TAGLC+YR Sbjct 61 ERRQMYEQVVDVPRLLAH--FGAEDPLPHPVLDEARAALSAHYGSELGEPFATAGLCFYR 118 Query 116 DGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGS 175 DG DSVAWHGD IGRG+ EDTMVAI+S+G R ALRP G G +LR P HGDL+VMGGS Sbjct 119 DGRDSVAWHGDRIGRGAREDTMVAILSVGDPRDLALRPHGGGRTLRFPQGHGDLIVMGGS 178 Query 176 CQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 CQRT++HAVPK++ GPR+SIQFRP+ VR Sbjct 179 CQRTWDHAVPKSTRAVGPRISIQFRPQGVR 208 >gi|29827672|ref|NP_822306.1| alkylated DNA repair protein [Streptomyces avermitilis MA-4680] gi|29604772|dbj|BAC68841.1| putative alkylated DNA repair protein [Streptomyces avermitilis MA-4680] Length=208 Score = 236 bits (601), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/204 (60%), Positives = 148/204 (73%), Gaps = 12/204 (5%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R LG GA+ID+ GWL+G + L + L + VPWRAERR+ Sbjct 5 LQGSLFDQTDELGLGPLDGLRRTVLGAGAWIDLLPGWLSGADALFERLAADVPWRAERRK 64 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYD+ VDVPRL++++ + PHP LA R L+ Y ELGEPFTTAGLCYYRDG DS Sbjct 65 MYDQTVDVPRLLAYYRAG-DTLPHPVLAEARDALSAHYVAELGEPFTTAGLCYYRDGRDS 123 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGD IGRG+ EDTMVAI+S+GA R ALRPRG G LR PL HGDL+VMGGSCQRT+ Sbjct 124 VAWHGDRIGRGAREDTMVAILSVGAPRDLALRPRGGGDVLRRPLGHGDLIVMGGSCQRTW 183 Query 181 EHAVPKTSAPTGPRVSIQFRPRDV 204 EHA+PK++ GPR+SIQFRP V Sbjct 184 EHAIPKSTRAAGPRISIQFRPSGV 207 >gi|302549090|ref|ZP_07301432.1| alkylated DNA repair protein [Streptomyces viridochromogenes DSM 40736] gi|302466708|gb|EFL29801.1| alkylated DNA repair protein [Streptomyces viridochromogenes DSM 40736] Length=207 Score = 235 bits (599), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/209 (59%), Positives = 152/209 (73%), Gaps = 15/209 (7%) Query 10 IAVQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAER 58 + +QG+LF+ + R LG GA++D+ GWL+G + L + L+S VPWRAER Sbjct 1 MHLQGSLFDQTDELRLGPLDGIGRTHLGFGAWLDVLPGWLSGSDALFEQLVSEVPWRAER 60 Query 59 RQMYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDG 117 R+MYD VVDVPRL++F+ EDP PHP L R L+ YG ELGEPF TAGLCYYRDG Sbjct 61 RKMYDNVVDVPRLLAFY--AAEDPLPHPVLTEARNALSAHYGEELGEPFATAGLCYYRDG 118 Query 118 SDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRP-RGRGPSLRLPLAHGDLLVMGGSC 176 DSVAWHGD IGRG+ EDTMVAI+S+GA R LRP RG ++R PL HGDL+VMGGSC Sbjct 119 RDSVAWHGDRIGRGAREDTMVAILSVGAPRDLLLRPMRGGRDTVRRPLGHGDLVVMGGSC 178 Query 177 QRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 QRT+EH+VPK++ TGPR+SIQFRP V+ Sbjct 179 QRTWEHSVPKSARATGPRISIQFRPHGVQ 207 >gi|294634091|ref|ZP_06712646.1| alkylated DNA repair protein [Streptomyces sp. e14] gi|292829905|gb|EFF88259.1| alkylated DNA repair protein [Streptomyces sp. e14] Length=210 Score = 234 bits (598), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 123/206 (60%), Positives = 148/206 (72%), Gaps = 13/206 (6%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R +LG GA+ID+ GWLTG +EL + L + VPWRAE+R+ Sbjct 6 LQGSLFDQADELRLGSLAGLRRTELGLGAWIDVLPGWLTGADELFEQLAAEVPWRAEQRK 65 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYD VV VPRL++F+ PHP LA R L+ YGGELGEPFTTAGLCYYRDG DS Sbjct 66 MYDNVVAVPRLLAFYAAGAP-LPHPVLAEARETLSAHYGGELGEPFTTAGLCYYRDGRDS 124 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRP-RGRGPSLRLPLAHGDLLVMGGSCQRT 179 VAWHGD GRG+ EDTMVAI+S+GA R LRP G G ++R PL HGDL+VMGGSCQRT Sbjct 125 VAWHGDRTGRGAREDTMVAILSVGAPRDLLLRPAHGGGTTVRRPLGHGDLIVMGGSCQRT 184 Query 180 FEHAVPKTSAPTGPRVSIQFRPRDVR 205 FEH VPK++ T PR+SIQFRP VR Sbjct 185 FEHCVPKSARVTEPRISIQFRPSGVR 210 >gi|111021899|ref|YP_704871.1| hypothetical protein RHA1_ro04932 [Rhodococcus jostii RHA1] gi|110821429|gb|ABG96713.1| conserved hypothetical protein [Rhodococcus jostii RHA1] Length=215 Score = 234 bits (596), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 121/192 (64%), Positives = 139/192 (73%), Gaps = 1/192 (0%) Query 14 GALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVS 73 G L +RR L GA++D+R GWLTG +EL L TVPW+AERRQMYDRVVDVPRLV Sbjct 25 GELGSAVQRRTLTAGAWVDVRPGWLTGSDELFTTLAETVPWKAERRQMYDRVVDVPRLVR 84 Query 74 FHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGST 133 F+ E P P L R L+ Y ELGE F T+GLC+YRDGSDSVAWHGD GR T Sbjct 85 FYP-EGEPLPDPLLETARDTLSRHYLPELGEKFATSGLCFYRDGSDSVAWHGDDTGRSRT 143 Query 134 EDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGP 193 EDT+VAI+SLGA R LRPRG G S+R L HGDLLVMGGSCQRT+EH VPK++ P GP Sbjct 144 EDTLVAILSLGAARPLLLRPRGGGHSIRYSLGHGDLLVMGGSCQRTWEHCVPKSTRPLGP 203 Query 194 RVSIQFRPRDVR 205 R+S+QFR R VR Sbjct 204 RISVQFRTRGVR 215 >gi|239991466|ref|ZP_04712130.1| putative alkylated DNA repair protein [Streptomyces roseosporus NRRL 11379] gi|291448462|ref|ZP_06587852.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] gi|291351409|gb|EFE78313.1| conserved hypothetical protein [Streptomyces roseosporus NRRL 15998] Length=209 Score = 233 bits (594), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/211 (59%), Positives = 149/211 (71%), Gaps = 15/211 (7%) Query 8 VAIAVQGALFEHN-----------ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRA 56 +A+ +Q +LF+ R LGDGA+ID+ WL G + L + L+ V WRA Sbjct 1 MAVHLQSSLFDQEAEVSTRPLSGLRRTDLGDGAWIDVLPRWLRGADTLFETLVRDVAWRA 60 Query 57 ERRQMYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYR 115 E+R MY+RVV VPRL++F DP PHP LA R L + Y ELGEPFTTAGLC+YR Sbjct 61 EQRVMYERVVAVPRLLAF--FGRHDPLPHPALAAARTELGEHYAAELGEPFTTAGLCFYR 118 Query 116 DGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPS-LRLPLAHGDLLVMGG 174 DG D VAWHGDTIGRGS+EDTMVAI+SLGA R ALRPR GP+ +R PL HGDL+VMGG Sbjct 119 DGRDGVAWHGDTIGRGSSEDTMVAILSLGAPRHLALRPRRPGPAPVRTPLGHGDLIVMGG 178 Query 175 SCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 SCQRT+EHA+PKT+ GPRVS+QFRP VR Sbjct 179 SCQRTWEHAIPKTARAVGPRVSVQFRPDGVR 209 >gi|329937615|ref|ZP_08287134.1| Alkylated DNA repair protein AlkB [Streptomyces griseoaurantiacus M045] gi|329303014|gb|EGG46902.1| Alkylated DNA repair protein AlkB [Streptomyces griseoaurantiacus M045] Length=208 Score = 233 bits (593), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 124/210 (60%), Positives = 148/210 (71%), Gaps = 14/210 (6%) Query 8 VAIAVQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRA 56 +A +QG+LF+ + R +L GA+ID+ GWLTG + L + L+ VPWRA Sbjct 1 MATHLQGSLFDQTDDLRLGPLDGLRRTRLNAGAWIDLLPGWLTGADTLFERLVLDVPWRA 60 Query 57 ERRQMYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYR 115 ERR+MYDR VDVPRL+ F+ DP PHP L R L+ Y ELGEPF TAGLCYYR Sbjct 61 ERRRMYDRSVDVPRLLRFY--GPGDPLPHPLLDEAREALSAHYADELGEPFVTAGLCYYR 118 Query 116 DGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGS 175 DG DSVAWHGD IGR + EDTM+AI+S+GA R ALRPRG G LR PL HGDL+VMGGS Sbjct 119 DGRDSVAWHGDRIGRSAHEDTMIAILSVGAPRDLALRPRGGGQVLRRPLGHGDLIVMGGS 178 Query 176 CQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 CQRT+EHAVPKT+ GPR+S+QFR R VR Sbjct 179 CQRTWEHAVPKTNRAAGPRISVQFRTRGVR 208 >gi|226364409|ref|YP_002782191.1| hypothetical protein ROP_49990 [Rhodococcus opacus B4] gi|226242898|dbj|BAH53246.1| hypothetical protein [Rhodococcus opacus B4] Length=215 Score = 232 bits (591), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 123/208 (60%), Positives = 145/208 (70%), Gaps = 14/208 (6%) Query 11 AVQGALFEHN-------------ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAE 57 A+Q +LF+ + +RR L GA++D+R GW+TG +EL L TVPW AE Sbjct 9 ALQASLFDDSSFGVELGELGPTVQRRTLTAGAWVDVRPGWMTGSDELFTTLAETVPWNAE 68 Query 58 RRQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDG 117 RRQMYDRVVDVPRLV F+ E P P LA R L+ Y EL E F T+GLC+YRDG Sbjct 69 RRQMYDRVVDVPRLVRFYP-EGEPLPDPLLASARDALSRHYLPELREEFATSGLCFYRDG 127 Query 118 SDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQ 177 SDSVAWHGD GR TEDTMVAI+SLGA+R LRPRG G S+R L HGDLLVMGGSCQ Sbjct 128 SDSVAWHGDDTGRSRTEDTMVAILSLGASRPLLLRPRGGGHSIRYSLGHGDLLVMGGSCQ 187 Query 178 RTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 RT+EH VPK++ P GPR+S+QFR R VR Sbjct 188 RTWEHCVPKSARPLGPRISVQFRTRGVR 215 >gi|226308173|ref|YP_002768133.1| hypothetical protein RER_46860 [Rhodococcus erythropolis PR4] gi|226187290|dbj|BAH35394.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=213 Score = 230 bits (587), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 118/187 (64%), Positives = 137/187 (74%), Gaps = 5/187 (2%) Query 21 ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE 80 +RR L GA++D R WLTG E + D L +TVPWR+ERRQMYDRVVDVPRLV F+ E Sbjct 30 QRRILTGGAWVDHRPAWLTGSEAVFDNLEATVPWRSERRQMYDRVVDVPRLVCFY---AE 86 Query 81 DPPHPQ--LARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMV 138 + P P L + L+ Y ELGEPF T+GLC+YRDGSDSVAWHGD GR TEDTMV Sbjct 87 NQPLPDALLTEAKDALSSHYFDELGEPFATSGLCFYRDGSDSVAWHGDDTGRSRTEDTMV 146 Query 139 AIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQ 198 AI+SLGA R LRPRG G S+R L HGDLLVMGGSCQRT+EH VPK++ GPR+S+Q Sbjct 147 AILSLGAARPLLLRPRGGGESIRFNLGHGDLLVMGGSCQRTWEHCVPKSARALGPRISVQ 206 Query 199 FRPRDVR 205 FR R VR Sbjct 207 FRTRGVR 213 >gi|311744321|ref|ZP_07718125.1| alkylated DNA repair protein [Aeromicrobium marinum DSM 15272] gi|311312494|gb|EFQ82407.1| alkylated DNA repair protein [Aeromicrobium marinum DSM 15272] Length=321 Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 123/208 (60%), Positives = 145/208 (70%), Gaps = 13/208 (6%) Query 9 AIAVQGALFEHNE------------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRA 56 A+ VQ +L +H E RR+L GA++D+R GW++G + L AL + V WRA Sbjct 114 AVYVQPSLLDHEEPAAVGSLGAAVQRRRLSRGAWVDVRPGWMSGADGLFLALQTEVRWRA 173 Query 57 ERRQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRD 116 ERR+MYDRVVDVPRL++ H P P L R L+D Y ELGEPF TAGLCYYRD Sbjct 174 ERREMYDRVVDVPRLLA-HFGAGRPLPDPALTAARDALSDHYAAELGEPFVTAGLCYYRD 232 Query 117 GSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSC 176 G DSVAWHGD IGRG EDTMVAIVSLGA R +LRPRG G +L L HGDLLVMGG+C Sbjct 233 GRDSVAWHGDRIGRGQREDTMVAIVSLGAPRRLSLRPRGGGEALGFVLGHGDLLVMGGTC 292 Query 177 QRTFEHAVPKTSAPTGPRVSIQFRPRDV 204 QRT++HAV KT+ P GPR+SIQFRP V Sbjct 293 QRTWDHAVLKTARPVGPRISIQFRPAGV 320 >gi|345003513|ref|YP_004806367.1| hypothetical protein SACTE_6047 [Streptomyces sp. SirexAA-E] gi|344319139|gb|AEN13827.1| conserved hypothetical protein [Streptomyces sp. SirexAA-E] Length=208 Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 121/205 (60%), Positives = 145/205 (71%), Gaps = 12/205 (5%) Query 12 VQGALFEHNERRQLG-----------DGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ +R LG DGA+ID+ GWL+GG+ L AL VPWRAERRQ Sbjct 5 LQGSLFDQADRPALGSLTGLRRTVLGDGAWIDVLPGWLSGGDALFTALADEVPWRAERRQ 64 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MYDR VDVPRL++F+ + P P L R L+ Y ELGEPFTTAGLC+YRDG DS Sbjct 65 MYDRTVDVPRLLAFYR-DGDALPSPVLDEARDALSAHYAEELGEPFTTAGLCHYRDGRDS 123 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTF 180 VAWHGDT GR S EDTMVAI+SLGA R LRP G ++R PL HGDL+VMGGSCQRT+ Sbjct 124 VAWHGDTHGRSSHEDTMVAILSLGAPRDLLLRPLRGGATVRRPLGHGDLIVMGGSCQRTW 183 Query 181 EHAVPKTSAPTGPRVSIQFRPRDVR 205 +HAVPKT+ GPR+S+Q+RP VR Sbjct 184 QHAVPKTAHARGPRISVQYRPHGVR 208 >gi|333920399|ref|YP_004493980.1| Alkylated DNA repair protein [Amycolicicoccus subflavus DQS3-9A1] gi|333482620|gb|AEF41180.1| Alkylated DNA repair protein [Amycolicicoccus subflavus DQS3-9A1] Length=203 Score = 228 bits (582), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 115/187 (62%), Positives = 136/187 (73%), Gaps = 5/187 (2%) Query 21 ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE 80 +R +L +GA++D W++G E L L+ VPW AERR+MYDRVVDVPRLV F+D E Sbjct 20 QRTELTEGAWVDTCPNWISGSEALFADLIEHVPWHAERRKMYDRVVDVPRLVYFYD---E 76 Query 81 DPPHPQ--LARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMV 138 P P L + R L+ Y ELGEPF TAG+CYYRDGSDSVAWHGD IGR STEDTMV Sbjct 77 GAPLPNSVLIQAREALDRHYETELGEPFVTAGMCYYRDGSDSVAWHGDRIGRSSTEDTMV 136 Query 139 AIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQ 198 AI+SLG R LRPR G SLR + HGDLLVMGGSCQRT+EH +PKT+ GPR+S+Q Sbjct 137 AILSLGEARHLLLRPRSGGRSLRFTVGHGDLLVMGGSCQRTWEHCIPKTTRAVGPRISVQ 196 Query 199 FRPRDVR 205 FRP +VR Sbjct 197 FRPHNVR 203 >gi|317125252|ref|YP_004099364.1| DNA-N1-methyladenine dioxygenase [Intrasporangium calvum DSM 43043] gi|315589340|gb|ADU48637.1| DNA-N1-methyladenine dioxygenase [Intrasporangium calvum DSM 43043] Length=223 Score = 227 bits (578), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 120/199 (61%), Positives = 141/199 (71%), Gaps = 8/199 (4%) Query 14 GALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVS 73 G L R +LG GA++D+R GWL G+EL L+ +VPWRAERR MYD VVDVPRL Sbjct 26 GRLAAGLHRTELGAGAWVDVRPGWLAAGDELFALLVRSVPWRAERRTMYDSVVDVPRLTR 85 Query 74 FHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGST 133 F+ E PHP L R L+ Y ELGEPF TAG+C YRDG DSVAWHGD IGR + Sbjct 86 FYAAG-EPLPHPLLDTARDALSVHYEAELGEPFVTAGMCLYRDGRDSVAWHGDRIGRSND 144 Query 134 EDTMVAIVSLGATRVFALRPR--GRGP-----SLRLPLAHGDLLVMGGSCQRTFEHAVPK 186 DT+VAI+SLG+ R ALRPR GR P +LRLPLAHGDL+VMGGSCQRT++HA+PK Sbjct 145 VDTIVAILSLGSARTLALRPRNGGRIPGSLQKALRLPLAHGDLVVMGGSCQRTWDHAIPK 204 Query 187 TSAPTGPRVSIQFRPRDVR 205 TS P GPR+S+QFR VR Sbjct 205 TSEPVGPRISVQFRVAGVR 223 >gi|126348088|emb|CAJ89809.1| putative alkylated DNA repair protein [Streptomyces ambofaciens ATCC 23877] Length=209 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 120/207 (58%), Positives = 147/207 (72%), Gaps = 15/207 (7%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R LG GA+ID+ GWL+G + L + L + VPWRAERR Sbjct 5 LQGSLFDQTDEVRLGPLDGVRRTHLGSGAWIDLLPGWLSGADALFERLAAEVPWRAERRA 64 Query 61 MYDRVVDVPRLVSFHDLTIEDP-PHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSD 119 MYD+VVDVPRL++F+ DP PHP L R L+ Y ELGEPFTTAGLC+YRDG D Sbjct 65 MYDQVVDVPRLLAFYG--AGDPLPHPLLTEARAALSAHYAPELGEPFTTAGLCHYRDGRD 122 Query 120 SVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPS-LRLPLAHGDLLVMGGSCQR 178 SVAWHGD IGRG+ +DTMVAI+S+GA R LRP G G S +R PL HGDL+VMGGSCQR Sbjct 123 SVAWHGDRIGRGARQDTMVAILSVGAPRDLLLRPAGGGGSTVRRPLGHGDLIVMGGSCQR 182 Query 179 TFEHAVPKTSAPTGPRVSIQFRPRDVR 205 T+EH VPK++ GPR+S+QFRP VR Sbjct 183 TWEHCVPKSTRAAGPRISVQFRPHGVR 209 >gi|21225578|ref|NP_631357.1| hypothetical protein SCO7302 [Streptomyces coelicolor A3(2)] gi|289767275|ref|ZP_06526653.1| alkylated DNA repair protein [Streptomyces lividans TK24] gi|8347035|emb|CAB93740.1| conserved hypothetical protein SC5F8.12c [Streptomyces coelicolor A3(2)] gi|289697474|gb|EFD64903.1| alkylated DNA repair protein [Streptomyces lividans TK24] Length=210 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 117/206 (57%), Positives = 149/206 (73%), Gaps = 13/206 (6%) Query 12 VQGALFEHNE-----------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQ 60 +QG+LF+ + R +LG GA+ID+ GWL+G + L + L + VPWRAERR+ Sbjct 6 LQGSLFDQTDEVRLGPLDGLRRTRLGPGAWIDLLPGWLSGADALFERLAAEVPWRAERRE 65 Query 61 MYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDS 120 MY+RVVDVPRL++F+ + PHP LA R L+ Y ELGEPFTTAGLC+YRDG DS Sbjct 66 MYERVVDVPRLLAFYGAG-DALPHPLLAEARDALSAHYAEELGEPFTTAGLCHYRDGRDS 124 Query 121 VAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPR-GRGPSLRLPLAHGDLLVMGGSCQRT 179 VAWHGD IGRG+ +DTMVAI+S+GA R LRP G G ++R PL HGDL+VMGGSCQRT Sbjct 125 VAWHGDRIGRGARQDTMVAILSVGAPRDLLLRPAGGGGETVRRPLGHGDLIVMGGSCQRT 184 Query 180 FEHAVPKTSAPTGPRVSIQFRPRDVR 205 +EH +PK++ GPR+S+QFRP VR Sbjct 185 WEHCIPKSTRAAGPRISVQFRPHGVR 210 >gi|238063684|ref|ZP_04608393.1| alkylated DNA repair protein [Micromonospora sp. ATCC 39149] gi|237885495|gb|EEP74323.1| alkylated DNA repair protein [Micromonospora sp. ATCC 39149] Length=210 Score = 225 bits (574), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 115/183 (63%), Positives = 133/183 (73%), Gaps = 1/183 (0%) Query 22 RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIED 81 R LG GA++D GW+ G + +LD LL+ VPWRAERR MYD VDVPRL+ ++ E Sbjct 28 RHPLGRGAWVDHLPGWVRGSDAVLDVLLADVPWRAERRTMYDARVDVPRLLCWYAGHREL 87 Query 82 PPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAIV 141 P H L R R L Y ELGEPF TAG+C YRDG DSVAWHGDT+GRG+ DTMVAIV Sbjct 88 P-HSVLTRARAALTAHYAPELGEPFVTAGMCLYRDGRDSVAWHGDTLGRGAHTDTMVAIV 146 Query 142 SLGATRVFALRPRGRGPSLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPRVSIQFRP 201 S G+ R LRPRG GP LR PL HGDL+VMGGSCQRT+EHA+PKT+ P GPRVS+QFRP Sbjct 147 SFGSPRPLLLRPRGGGPGLRFPLGHGDLVVMGGSCQRTWEHAIPKTARPVGPRVSVQFRP 206 Query 202 RDV 204 V Sbjct 207 AGV 209 >gi|284032194|ref|YP_003382125.1| putative alkylated DNA repair protein [Kribbella flavida DSM 17836] gi|283811487|gb|ADB33326.1| putative alkylated DNA repair protein [Kribbella flavida DSM 17836] Length=214 Score = 224 bits (572), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 114/191 (60%), Positives = 142/191 (75%), Gaps = 7/191 (3%) Query 21 ERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDRVVDVPRLVSFHDLTIE 80 +R +L GA+ID+ GWL+G +++ + L + VPWR ERRQMYDRVVDVPRL+ F+ + + Sbjct 25 QRAELSHGAWIDVLPGWLSGADQVYERLAADVPWREERRQMYDRVVDVPRLLCFYGES-D 83 Query 81 DPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWHGDTIGRGSTEDTMVAI 140 P P L R L++ Y ELGEPF TAGLC+YRDG DSVAWHGD +GRG+ EDTMVAI Sbjct 84 TLPLPILEEARDLLSEHYTEELGEPFRTAGLCFYRDGRDSVAWHGDRLGRGNAEDTMVAI 143 Query 141 VSLGATRVFALRPRG---RGP---SLRLPLAHGDLLVMGGSCQRTFEHAVPKTSAPTGPR 194 +S+G R+ ALRPR GP ++R PL HGDL+VMGGSCQRT+EHA+PK S GPR Sbjct 144 LSVGEPRILALRPRPGSLSGPVSSTIRYPLGHGDLIVMGGSCQRTWEHAIPKASGRVGPR 203 Query 195 VSIQFRPRDVR 205 +SIQFRPR VR Sbjct 204 ISIQFRPRGVR 214 >gi|256825021|ref|YP_003148981.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547] gi|256688414|gb|ACV06216.1| DNA-N1-methyladenine dioxygenase [Kytococcus sedentarius DSM 20547] Length=210 Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 120/211 (57%), Positives = 142/211 (68%), Gaps = 14/211 (6%) Query 8 VAIAVQGALFEHNE------------RRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWR 55 +A A QG+LF+ R+ L DGA++D+R GWLTG E+L L++TVPW+ Sbjct 1 MAAATQGSLFDQETTLGLRSLAGAVVRQHLTDGAWVDVRPGWLTGSEQLCAELVTTVPWQ 60 Query 56 AERRQMYDRVVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEP-FTTAGLCYY 114 AERR+MYDRVVD PRL+ F+ P HP L R L Y E G P FTTAGLC Y Sbjct 61 AERRRMYDRVVDTPRLLRFYGPGAALP-HPVLREAREALTAHYAAEAGAPPFTTAGLCLY 119 Query 115 RDGSDSVAWHGDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGPSLRLPLAHGDLLVMGG 174 RD DSVAWHGD +GRG+T DT+VAI+S GA R LRPRG G + L + HGDL+VMGG Sbjct 120 RDEHDSVAWHGDRVGRGATHDTLVAILSTGAPRRLLLRPRGGGATRTLQVGHGDLVVMGG 179 Query 175 SCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 SCQRT+EHAVPK TGPRVSIQFRP VR Sbjct 180 SCQRTWEHAVPKEHHRTGPRVSIQFRPAGVR 210 >gi|288916587|ref|ZP_06410963.1| putative alkylated DNA repair protein [Frankia sp. EUN1f] gi|288352018|gb|EFC86219.1| putative alkylated DNA repair protein [Frankia sp. EUN1f] Length=234 Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 121/214 (57%), Positives = 144/214 (68%), Gaps = 14/214 (6%) Query 5 LGGVAIAVQGALFEHNERRQLGDGAFIDIRSGWLTGGEELLDALLSTVPWRAERRQMYDR 64 L G A AV L E R L GA++D+R W+TG + L + L + VPWRAERR MYDR Sbjct 22 LDGQADAVVEPLREGLRRHDLAAGAWVDLRRRWVTGADSLFERLCAQVPWRAERRPMYDR 81 Query 65 VVDVPRLVSFHDLTIEDPPHPQLARMRRRLNDIYGGELGEPFTTAGLCYYRDGSDSVAWH 124 VD+PRL+SF++ + P P L RR L+ Y ELGEPF T GL YRDG DSVAWH Sbjct 82 TVDIPRLLSFYE-EGQPLPDPALVAARRALDAHYAPELGEPFATLGLALYRDGRDSVAWH 140 Query 125 GDTIGRGSTEDTMVAIVSLGATRVFALRPRGRGP-------------SLRLPLAHGDLLV 171 GD IGRGS+ DTMVAI+ LGA R LRPR GP ++RL L HGDLLV Sbjct 141 GDRIGRGSSHDTMVAILVLGAPRALLLRPRPGGPAATRTATATATSATIRLTLGHGDLLV 200 Query 172 MGGSCQRTFEHAVPKTSAPTGPRVSIQFRPRDVR 205 MGGSCQRT++HAVPKT+ P GPR+S+QFRPR+VR Sbjct 201 MGGSCQRTWDHAVPKTTRPVGPRLSVQFRPRNVR 234 Lambda K H 0.322 0.141 0.439 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 229991766768 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40