BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1009
Length=362
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608149|ref|NP_215525.1| resuscitation-promoting factor rpfB... 723 0.0
gi|289442430|ref|ZP_06432174.1| resuscitation-promoting factor r... 721 0.0
gi|339294012|gb|AEJ46123.1| resuscitation-promoting factor rpfB ... 720 0.0
gi|340626021|ref|YP_004744473.1| putative resuscitation-promotin... 719 0.0
gi|254231304|ref|ZP_04924631.1| resuscitation-promoting factor r... 718 0.0
gi|31792200|ref|NP_854693.1| resuscitation-promoting factor rpfB... 718 0.0
gi|167968133|ref|ZP_02550410.1| resuscitation-promoting factor r... 715 0.0
gi|336461348|gb|EGO40219.1| hypothetical protein MAPs_30880 [Myc... 634 8e-180
gi|296169878|ref|ZP_06851490.1| resuscitation-promoting factor R... 632 3e-179
gi|254820389|ref|ZP_05225390.1| hypothetical protein MintA_10691... 622 2e-176
gi|254774036|ref|ZP_05215552.1| hypothetical protein MaviaA2_050... 622 3e-176
gi|41407072|ref|NP_959908.1| hypothetical protein MAP0974 [Mycob... 619 2e-175
gi|183984449|ref|YP_001852740.1| resuscitation-promoting factor ... 616 1e-174
gi|342861610|ref|ZP_08718256.1| hypothetical protein MCOL_22091 ... 616 1e-174
gi|240169907|ref|ZP_04748566.1| resuscitation-promoting factor R... 612 4e-173
gi|118619729|ref|YP_908061.1| resuscitation-promoting factor Rpf... 610 1e-172
gi|118463933|ref|YP_880397.1| resuscitation-promoting factor Rpf... 603 2e-170
gi|15827036|ref|NP_301299.1| hypothetical protein ML0240 [Mycoba... 587 1e-165
gi|118471468|ref|YP_889678.1| resuscitation-promoting factor Rpf... 566 2e-159
gi|108801228|ref|YP_641425.1| transglycosylase-like protein [Myc... 537 8e-151
gi|120405751|ref|YP_955580.1| transglycosylase domain-containing... 535 3e-150
gi|333989605|ref|YP_004522219.1| resuscitation-promoting factor ... 535 4e-150
gi|289757092|ref|ZP_06516470.1| resuscitation-promoting factor r... 528 8e-148
gi|145222522|ref|YP_001133200.1| transglycosylase domain-contain... 519 4e-145
gi|315442970|ref|YP_004075849.1| hypothetical protein Mspyr1_133... 513 2e-143
gi|169628223|ref|YP_001701872.1| hypothetical protein MAB_1130 [... 457 2e-126
gi|126434279|ref|YP_001069970.1| transglycosylase domain-contain... 448 7e-124
gi|108798680|ref|YP_638877.1| transglycosylase-like protein [Myc... 434 1e-119
gi|289749538|ref|ZP_06508916.1| resuscitation-promoting factor r... 425 5e-117
gi|229494932|ref|ZP_04388683.1| resuscitation-promoting factor R... 384 1e-104
gi|111022635|ref|YP_705607.1| hypothetical protein RHA1_ro05670 ... 383 2e-104
gi|226307848|ref|YP_002767808.1| resuscitation-promoting factor ... 381 1e-103
gi|226365141|ref|YP_002782924.1| resuscitation-promoting factor ... 380 1e-103
gi|325676280|ref|ZP_08155959.1| resuscitation-promoting factor R... 371 9e-101
gi|312138651|ref|YP_004005987.1| resuscitation-promoting factor ... 370 1e-100
gi|54026878|ref|YP_121120.1| hypothetical protein nfa49040 [Noca... 363 2e-98
gi|220702457|pdb|3EO5|A Chain A, Crystal Structure Of The Resusc... 346 4e-93
gi|226365140|ref|YP_002782923.1| resuscitation-promoting factor ... 342 5e-92
gi|111022634|ref|YP_705606.1| hypothetical protein RHA1_ro05669 ... 340 2e-91
gi|229494947|ref|ZP_04388698.1| resuscitation-promoting factor R... 338 1e-90
gi|226307849|ref|YP_002767809.1| resuscitation-promoting factor ... 335 8e-90
gi|312138650|ref|YP_004005986.1| g5 domain transglycosylase [Rho... 316 4e-84
gi|325676281|ref|ZP_08155960.1| resuscitation-promoting factor R... 313 2e-83
gi|333921160|ref|YP_004494741.1| Resuscitation-promoting factor ... 296 3e-78
gi|317506075|ref|ZP_07963903.1| transglycosylase domain-containi... 286 3e-75
gi|296394636|ref|YP_003659520.1| transglycosylase [Segniliparus ... 277 2e-72
gi|343925257|ref|ZP_08764784.1| resuscitation-promoting factor [... 269 6e-70
gi|319950589|ref|ZP_08024497.1| hypothetical protein ES5_13428 [... 260 2e-67
gi|340795013|ref|YP_004760476.1| resuscitation-promoting factor ... 259 7e-67
gi|262201473|ref|YP_003272681.1| transglycosylase [Gordonia bron... 256 3e-66
>gi|15608149|ref|NP_215525.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
H37Rv]
gi|15840437|ref|NP_335474.1| hypothetical protein MT1038 [Mycobacterium tuberculosis CDC1551]
gi|148660791|ref|YP_001282314.1| putative resuscitation-promoting factor RpfB [Mycobacterium tuberculosis
H37Ra]
59 more sequence titles
Length=362
Score = 723 bits (1865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/362 (100%), Positives = 362/362 (100%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|289442430|ref|ZP_06432174.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T46]
gi|289568986|ref|ZP_06449213.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T17]
gi|289415349|gb|EFD12589.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T46]
gi|289542740|gb|EFD46388.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T17]
Length=362
Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/362 (99%), Positives = 362/362 (100%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A+VNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AKVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|339294012|gb|AEJ46123.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
CCDC5079]
Length=362
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/362 (99%), Positives = 361/362 (99%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQ TWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQDTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|340626021|ref|YP_004744473.1| putative resuscitation-promoting factor rpfB [Mycobacterium canettii
CIPT 140010059]
gi|340004211|emb|CCC43351.1| putative resuscitation-promoting factor rpfB [Mycobacterium canettii
CIPT 140010059]
Length=362
Score = 719 bits (1857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/362 (99%), Positives = 361/362 (99%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGT+VPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTDVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTR RQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRQRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|254231304|ref|ZP_04924631.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
C]
gi|124600363|gb|EAY59373.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
C]
Length=362
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/362 (99%), Positives = 361/362 (99%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGG AVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGDAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|31792200|ref|NP_854693.1| resuscitation-promoting factor rpfB [Mycobacterium bovis AF2122/97]
gi|121636938|ref|YP_977161.1| putative resuscitation-promoting factor rpfB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224989410|ref|YP_002644097.1| putative resuscitation-promoting factor [Mycobacterium bovis
BCG str. Tokyo 172]
gi|31617788|emb|CAD93897.1| Probable resuscitation-promoting factor rpfB [Mycobacterium bovis
AF2122/97]
gi|121492585|emb|CAL71053.1| Probable resuscitation-promoting factor rpfB [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224772523|dbj|BAH25329.1| putative resuscitation-promoting factor [Mycobacterium bovis
BCG str. Tokyo 172]
gi|341600954|emb|CCC63625.1| probable resuscitation-promoting factor rpfB [Mycobacterium bovis
BCG str. Moreau RDJ]
Length=362
Score = 718 bits (1854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/362 (99%), Positives = 360/362 (99%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVID SIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDESIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCA RAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAVRAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|167968133|ref|ZP_02550410.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
H37Ra]
Length=362
Score = 715 bits (1846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/362 (99%), Positives = 360/362 (99%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTV EALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVHEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMA PVVSAKTVQL+DGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMAPPVVSAKTVQLHDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG
Sbjct 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|336461348|gb|EGO40219.1| hypothetical protein MAPs_30880 [Mycobacterium avium subsp. paratuberculosis
S397]
Length=362
Score = 634 bits (1635), Expect = 8e-180, Method: Compositional matrix adjust.
Identities = 309/362 (86%), Positives = 335/362 (93%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVG L+VLAFAGGYAV+ CKTVTLTVDG AMRVTTMKS+VID+VEENGF VDDRD
Sbjct 1 MLRLVVGGPLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VHDA IVLRRSRPLQISLDGHD+KQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAADVAVHDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
+R SRVPL+GMALPVVSAKTV++NDGG VRTVHL A NVAGLLSAAG PL +SD V P A
Sbjct 121 NRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAASNVAGLLSAAGAPLAESDQVAPPA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+APIV+GM+IQVTRNRI++VTER+PLPPNARR+EDP+MNMSR+VVEDPG PGTQDVTF+V
Sbjct 181 SAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGSPGTQDVTFSV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA E+VVRVGTKPGTEVPP+ DGSIWDAIAGCEAGGNWAIN
Sbjct 241 ATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+APRADLATREEQI VAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|296169878|ref|ZP_06851490.1| resuscitation-promoting factor RpfB [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895434|gb|EFG75136.1| resuscitation-promoting factor RpfB [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=362
Score = 632 bits (1630), Expect = 3e-179, Method: Compositional matrix adjust.
Identities = 306/361 (85%), Positives = 334/361 (93%), Gaps = 0/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLR VVG LL+VLAFAGG+AV+ACKTVTLTVDG AMRVTTMKSRVIDIV+ENGF+VD+RD
Sbjct 1 MLRFVVGGLLVVLAFAGGFAVSACKTVTLTVDGIAMRVTTMKSRVIDIVQENGFAVDERD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPA V+VHDA IVLRRSRPLQISLDGHD KQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAGDVKVHDATNIVLRRSRPLQISLDGHDTKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SRVPL+GMALPVVSAKTV++NDGG RTVHLPAPNVAGLLSAAG PLL+ D P A
Sbjct 121 SRGSRVPLAGMALPVVSAKTVRINDGGATRTVHLPAPNVAGLLSAAGAPLLEGDQATPNA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+PIV+GM+IQVTRNRI+++TER+PLPPNARRVEDP+MNMSR+VVEDPG PGTQDVTFAV
Sbjct 181 ASPIVDGMEIQVTRNRIQRITERMPLPPNARRVEDPDMNMSRQVVEDPGSPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA +AVVRVGTKPGT+VPPV +G+IWDAIAGCEAGGNWAIN
Sbjct 241 ATVNGVETGRLPIANTVITPARDAVVRVGTKPGTDVPPVSNGAIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+A RADLATREEQIAVAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWERNGGLRFAARADLATREEQIAVAEVTRERQGWGAWPVCSGRAG 360
Query 361 A 361
A
Sbjct 361 A 361
>gi|254820389|ref|ZP_05225390.1| hypothetical protein MintA_10691 [Mycobacterium intracellulare
ATCC 13950]
Length=362
Score = 622 bits (1605), Expect = 2e-176, Method: Compositional matrix adjust.
Identities = 310/362 (86%), Positives = 336/362 (93%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVG LL+VLAFAGGYA++ CKTVTLTVDG AM+V TMKSRVID+VEENGF +DDRD
Sbjct 1 MLRLVVGGLLVVLAFAGGYAISVCKTVTLTVDGVAMQVKTMKSRVIDVVEENGFVIDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VHDA IVLRRSRPLQISLDGHD KQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAADVAVHDAGKIVLRRSRPLQISLDGHDTKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
+R SRVPL+GMALPVVSAKTV++NDGG VRTVHL APNVAGLLSAAG PLL+SD VVPAA
Sbjct 121 NRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAAPNVAGLLSAAGAPLLESDQVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
T PIV+GM++QVTRNRI++VTER+PLPPNARR+EDPEMNMSR+VVEDPG PGTQDVTF+V
Sbjct 181 TTPIVDGMEVQVTRNRIQQVTERIPLPPNARRIEDPEMNMSRQVVEDPGSPGTQDVTFSV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA E+VVRVGTKPGTEVPP+ DGSIWDAIAGCEAGGNWAIN
Sbjct 241 ATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+A RADLATREEQI VAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWERNGGLRFAARADLATREEQITVAEVTRERQGWGAWPVCSGRAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|254774036|ref|ZP_05215552.1| hypothetical protein MaviaA2_05099 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=362
Score = 622 bits (1604), Expect = 3e-176, Method: Compositional matrix adjust.
Identities = 311/362 (86%), Positives = 337/362 (94%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVG LL+VLAFAGGYAV+ CKTVTLTVDG AMRVTTMKS+VID+VEENGF VDDRD
Sbjct 1 MLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VHDA IVLRRSRPLQISLDGHD+KQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAADVAVHDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
+R SRVPL+GMALPVVSAKTV++NDGG VRTVHL APNVAGLLSAAG PL +SD V P A
Sbjct 121 NRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAAPNVAGLLSAAGAPLAESDQVAPPA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+APIV+GM+IQVTRNRI++VTER+PLPPNARR+EDP+MNMSR+VVEDPG PGTQDVTF+V
Sbjct 181 SAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGSPGTQDVTFSV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA E+VVRVGTKPGTEVPP+ DGSIWDAIAGCEAGGNWAIN
Sbjct 241 ATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+APRADLATREEQI VAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|41407072|ref|NP_959908.1| hypothetical protein MAP0974 [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|41395423|gb|AAS03291.1| hypothetical protein MAP_0974 [Mycobacterium avium subsp. paratuberculosis
K-10]
Length=372
Score = 619 bits (1597), Expect = 2e-175, Method: Compositional matrix adjust.
Identities = 310/362 (86%), Positives = 336/362 (93%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVG LL+VLAFAGGYAV+ CKTVTLTVDG AMRVTTMKS+VID+VEENGF VDDRD
Sbjct 11 MLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRD 70
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VHDA IVLRRSRPLQISLDGHD+KQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 71 DLYPAADVAVHDAGKIVLRRSRPLQISLDGHDSKQVWTTASTVDEALAQLAMTDTAPAAA 130
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
+R SRVPL+GMALPVVSAKTV++NDGG VRTVHL A NVAGLLSAAG PL +SD V P A
Sbjct 131 NRGSRVPLAGMALPVVSAKTVRINDGGAVRTVHLAASNVAGLLSAAGAPLAESDQVAPPA 190
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+APIV+GM+IQVTRNRI++VTER+PLPPNARR+EDP+MNMSR+VVEDPG PGTQDVTF+V
Sbjct 191 SAPIVDGMEIQVTRNRIQQVTERMPLPPNARRIEDPDMNMSRQVVEDPGSPGTQDVTFSV 250
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA E+VVRVGTKPGTEVPP+ DGSIWDAIAGCEAGGNWAIN
Sbjct 251 ATVNGVETGRLPIANTVITPARESVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAIN 310
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+APRADLATREEQI VAEVTR RQGWGAWPVC+ RAG
Sbjct 311 TGNGYYGGVQFDQGTWERNGGLRFAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAG 370
Query 361 AR 362
AR
Sbjct 371 AR 372
>gi|183984449|ref|YP_001852740.1| resuscitation-promoting factor RpfB [Mycobacterium marinum M]
gi|183177775|gb|ACC42885.1| resuscitation-promoting factor RpfB [Mycobacterium marinum M]
Length=362
Score = 616 bits (1589), Expect = 1e-174, Method: Compositional matrix adjust.
Identities = 307/362 (85%), Positives = 331/362 (92%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLR VVGALL+ LA AGGYAV+A KTVTLTVDGTAMRVTTMKSRVIDIV+ENG+SV DRD
Sbjct 1 MLRAVVGALLVGLALAGGYAVSASKTVTLTVDGTAMRVTTMKSRVIDIVQENGYSVGDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VH+ADTIVLRRSRPL+ISLDGH K+VWTTASTVDEALAQLAMTDTAPA A
Sbjct 61 DLYPAAEVAVHNADTIVLRRSRPLEISLDGHQVKKVWTTASTVDEALAQLAMTDTAPATA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SRVPL+GMALPVVSAK VQ+NDGG+VR+VHLPA NVA LLSAAG PL +D VVP+A
Sbjct 121 SRGSRVPLAGMALPVVSAKNVQINDGGVVRSVHLPAANVAALLSAAGAPLQGNDQVVPSA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
PIV+GMQI+VTRNRI++VTER+ LPP ARR+EDPEMN+SREVVEDPG PGTQDVTFAV
Sbjct 181 ATPIVDGMQIEVTRNRIERVTERVELPPPARRIEDPEMNISREVVEDPGAPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGV TG+LPVANVV+TPA EAVVRVGTKPGTEVP VIDGSIWDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVVTGKLPVANVVITPAREAVVRVGTKPGTEVPVVIDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGY+GGVQFDQGTW ANGGLRYA RADLATREEQIAVAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYFGGVQFDQGTWVANGGLRYAERADLATREEQIAVAEVTRQRQGWGAWPVCSGRAG 360
Query 361 AR 362
A
Sbjct 361 AH 362
>gi|342861610|ref|ZP_08718256.1| hypothetical protein MCOL_22091 [Mycobacterium colombiense CECT
3035]
gi|342130744|gb|EGT84040.1| hypothetical protein MCOL_22091 [Mycobacterium colombiense CECT
3035]
Length=362
Score = 616 bits (1589), Expect = 1e-174, Method: Compositional matrix adjust.
Identities = 308/362 (86%), Positives = 336/362 (93%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVG LL+VLAFAGGYAV+ CKTVTLTVDG AM+VTTMKSRVID+VEENGF++D+RD
Sbjct 1 MLRLVVGGLLVVLAFAGGYAVSVCKTVTLTVDGVAMQVTTMKSRVIDVVEENGFAIDERD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPA V+VHDA IVLRRSRPLQISLDGHDA+QVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAGDVKVHDAGKIVLRRSRPLQISLDGHDARQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
+R SRVPL+GMALPVVSAKTV++NDGG VR VHL APNVAGLLSAAG PLL SD VVPAA
Sbjct 121 NRGSRVPLAGMALPVVSAKTVRINDGGAVRNVHLAAPNVAGLLSAAGAPLLDSDQVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIV+GM++QVTRNRIK+VTER+PLPP ARR+EDP MNMSR+VVEDPG PGTQDVTF+V
Sbjct 181 TAPIVDGMEVQVTRNRIKQVTERVPLPPTARRIEDPGMNMSRQVVEDPGSPGTQDVTFSV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLP+AN V+TPA ++VVR+GTKPGTEVPPV DGSIWDAIAGCEAGGNWAIN
Sbjct 241 ATVNGVETGRLPIANTVITPARDSVVRIGTKPGTEVPPVSDGSIWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTWE NGGLR+A RADLATREEQI VAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWERNGGLRFASRADLATREEQITVAEVTRERQGWGAWPVCSGRAG 360
Query 361 AR 362
AR
Sbjct 361 AR 362
>gi|240169907|ref|ZP_04748566.1| resuscitation-promoting factor RpfB [Mycobacterium kansasii ATCC
12478]
Length=358
Score = 612 bits (1577), Expect = 4e-173, Method: Compositional matrix adjust.
Identities = 303/358 (85%), Positives = 328/358 (92%), Gaps = 0/358 (0%)
Query 5 VVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYP 64
+VGALLL LAFAGGYAV+A KTVTLTVDGTAMRVTTMKSRVI++V+ENGFSVD RDDLYP
Sbjct 1 MVGALLLGLAFAGGYAVSAAKTVTLTVDGTAMRVTTMKSRVIEVVQENGFSVDARDDLYP 60
Query 65 AAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRAS 124
A V VHD++ IVLRRSRPL+ISLDGHD K+VWTTASTVDEALAQLAMTDTAPAAASR S
Sbjct 61 AGDVVVHDSENIVLRRSRPLEISLDGHDVKKVWTTASTVDEALAQLAMTDTAPAAASRGS 120
Query 125 RVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPI 184
RVPL+GMALPVVSAKTV++NDGG+VRTVHL APNVAGLL AAGVPL SD VVP AT PI
Sbjct 121 RVPLAGMALPVVSAKTVEINDGGVVRTVHLAAPNVAGLLDAAGVPLQGSDQVVPGATTPI 180
Query 185 VEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVN 244
+GMQIQVTR RI++VTERLPL P+A R+EDPEMNMSR+VVED G PG QDVTFAVAEVN
Sbjct 181 TDGMQIQVTRYRIERVTERLPLLPDALRIEDPEMNMSRKVVEDAGTPGEQDVTFAVAEVN 240
Query 245 GVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNG 304
GV TG+LP+ANVV+TPA +AVVRVGTKPGT+VPPV DG IWDAIAGCEAGGNWAINTGNG
Sbjct 241 GVVTGKLPIANVVLTPARDAVVRVGTKPGTDVPPVSDGDIWDAIAGCEAGGNWAINTGNG 300
Query 305 YYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 362
YYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTR RQGWGAWPVC+ RAG R
Sbjct 301 YYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRQRQGWGAWPVCSGRAGTR 358
>gi|118619729|ref|YP_908061.1| resuscitation-promoting factor RpfB [Mycobacterium ulcerans Agy99]
gi|118571839|gb|ABL06590.1| resuscitation-promoting factor RpfB [Mycobacterium ulcerans Agy99]
Length=362
Score = 610 bits (1573), Expect = 1e-172, Method: Compositional matrix adjust.
Identities = 304/362 (84%), Positives = 329/362 (91%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLR VVGALL+ LA AGGYAV+A KTVTLTVDGTAMRVTTMKSRVIDIV+ENG+SV D D
Sbjct 1 MLRAVVGALLVGLALAGGYAVSASKTVTLTVDGTAMRVTTMKSRVIDIVQENGYSVGDGD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V VH+A+TIVLRRSRPL+ISLDGH K+VWTTASTVDEALAQLAMTDTAPA A
Sbjct 61 DLYPAAEVAVHNAETIVLRRSRPLEISLDGHQVKKVWTTASTVDEALAQLAMTDTAPATA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SRVPL+GMALPVVSAK VQ+NDGG+VR+VHLPA NVA LLSAAG PL +D V P+A
Sbjct 121 SRGSRVPLAGMALPVVSAKNVQINDGGVVRSVHLPAVNVAALLSAAGAPLQGNDQVAPSA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
PIV+GMQI+VTRNRI++VTER+ LPP ARR+EDPEMN+SREVVEDPG PGTQDVTFAV
Sbjct 181 ATPIVDGMQIEVTRNRIERVTERVELPPPARRIEDPEMNISREVVEDPGAPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
AEVNGV TG+LPVANVV+TPA EAVVRVGTKPGTEVP VIDGS+WDAIAGCEAGGNWAIN
Sbjct 241 AEVNGVVTGKLPVANVVITPAREAVVRVGTKPGTEVPVVIDGSVWDAIAGCEAGGNWAIN 300
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGGVQFDQGTW ANGGLRYA RADLATREEQIAVAEVTR RQGWGAWPVC+ RAG
Sbjct 301 TGNGYYGGVQFDQGTWVANGGLRYAERADLATREEQIAVAEVTRQRQGWGAWPVCSGRAG 360
Query 361 AR 362
A
Sbjct 361 AH 362
>gi|118463933|ref|YP_880397.1| resuscitation-promoting factor RpfB [Mycobacterium avium 104]
gi|118165220|gb|ABK66117.1| resuscitation-promoting factor RpfB [Mycobacterium avium 104]
Length=340
Score = 603 bits (1554), Expect = 2e-170, Method: Compositional matrix adjust.
Identities = 292/339 (87%), Positives = 315/339 (93%), Gaps = 0/339 (0%)
Query 24 CKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRRSRP 83
CKTVTLTVDG AMRVTTMKS+VID+VEENGF VDDRDDLYPAA V VHDA IVLRRSRP
Sbjct 2 CKTVTLTVDGVAMRVTTMKSKVIDVVEENGFVVDDRDDLYPAADVAVHDAGKIVLRRSRP 61
Query 84 LQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQL 143
LQISLDGHD KQVWTTASTVDEALAQLAMTDTAPAAA+R SRVPL+GMALPVVSAKTV++
Sbjct 62 LQISLDGHDTKQVWTTASTVDEALAQLAMTDTAPAAANRGSRVPLAGMALPVVSAKTVRI 121
Query 144 NDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTER 203
NDGG VRTVHL APNVAGLLSAAG PL +SD V P A+APIV+GM+IQVTRNRI++VTER
Sbjct 122 NDGGAVRTVHLAAPNVAGLLSAAGAPLAESDQVAPPASAPIVDGMEIQVTRNRIQQVTER 181
Query 204 LPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVANVVVTPAHE 263
+PLPPNARR+EDP+MNMSR+VVEDPG PGTQDVTF+VA VNGVETGRLP+AN V+TPA E
Sbjct 182 MPLPPNARRIEDPDMNMSRQVVEDPGSPGTQDVTFSVATVNGVETGRLPIANTVITPARE 241
Query 264 AVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLR 323
+VVRVGTKPGTEVPP+ DGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWE NGGLR
Sbjct 242 SVVRVGTKPGTEVPPISDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWERNGGLR 301
Query 324 YAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 362
+APRADLATREEQI VAEVTR RQGWGAWPVC+ RAGAR
Sbjct 302 FAPRADLATREEQITVAEVTRERQGWGAWPVCSGRAGAR 340
>gi|15827036|ref|NP_301299.1| hypothetical protein ML0240 [Mycobacterium leprae TN]
gi|221229514|ref|YP_002502930.1| hypothetical protein MLBr_00240 [Mycobacterium leprae Br4923]
gi|13092583|emb|CAC29748.1| conserved hypothetical protein [Mycobacterium leprae]
gi|219932621|emb|CAR70333.1| conserved hypothetical protein [Mycobacterium leprae Br4923]
Length=375
Score = 587 bits (1513), Expect = 1e-165, Method: Compositional matrix adjust.
Identities = 288/350 (83%), Positives = 312/350 (90%), Gaps = 0/350 (0%)
Query 13 LAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHD 72
+AFAGGYAVAA KTVTLTVDGT M+V TMKSRVIDI++ENGF+V + DDLYPAA V VH
Sbjct 26 IAFAGGYAVAAYKTVTLTVDGTPMQVMTMKSRVIDIIQENGFAVGECDDLYPAADVSVHA 85
Query 73 ADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMA 132
D IVLRRSRPLQISLDG D +QVWTTASTVDEAL QLA+TDTAP ASR SRVPL+GMA
Sbjct 86 TDNIVLRRSRPLQISLDGKDIQQVWTTASTVDEALVQLALTDTAPIVASRGSRVPLTGMA 145
Query 133 LPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQV 192
LPVVSAKTVQ+NDGG VR VHLPA NV GLL+A G+PLL SD V P+AT+PIVEGMQIQV
Sbjct 146 LPVVSAKTVQINDGGAVRMVHLPASNVGGLLAAVGIPLLASDQVSPSATSPIVEGMQIQV 205
Query 193 TRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLP 252
TRNRI++V ER+PLPP++R +EDPEMN+SR VVEDPG PGTQDVTFAVA VNGVETGRLP
Sbjct 206 TRNRIERVIERIPLPPSSRSIEDPEMNISRVVVEDPGTPGTQDVTFAVATVNGVETGRLP 265
Query 253 VANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFD 312
VANVVV PA E+V+RVGTKPGTEVPPV DGSIWDAIAGCEAGGNWAINTGNGYYGGVQFD
Sbjct 266 VANVVVEPARESVIRVGTKPGTEVPPVSDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFD 325
Query 313 QGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 362
QGTW ANGGLRYAPRADLATREEQIAVAEVTR RQGW AWPVC+ R GA
Sbjct 326 QGTWVANGGLRYAPRADLATREEQIAVAEVTRARQGWDAWPVCSGRVGAH 375
>gi|118471468|ref|YP_889678.1| resuscitation-promoting factor RpfB [Mycobacterium smegmatis
str. MC2 155]
gi|118172755|gb|ABK73651.1| resuscitation-promoting factor RpfB [Mycobacterium smegmatis
str. MC2 155]
Length=375
Score = 566 bits (1458), Expect = 2e-159, Method: Compositional matrix adjust.
Identities = 279/362 (78%), Positives = 309/362 (86%), Gaps = 0/362 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+LR VVGA L+ L AG YAVA+ KTVTL+VDG M VTTMKSRVIDIVEENGF V DRD
Sbjct 14 LLRGVVGAFLVSLTVAGSYAVASHKTVTLSVDGAPMTVTTMKSRVIDIVEENGFEVSDRD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DL+PAA VH +DTIVLRRSRPL++SLDG KQVWTTASTVDEALAQL MTD APAAA
Sbjct 74 DLFPAATETVHQSDTIVLRRSRPLEVSLDGEGTKQVWTTASTVDEALAQLRMTDKAPAAA 133
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SRVPL+GMALPVVS KTVQ++DGG V TVHL APNVAGLL AAGVPL Q+D VVPAA
Sbjct 134 SRGSRVPLAGMALPVVSPKTVQIDDGGKVSTVHLAAPNVAGLLEAAGVPLEQNDKVVPAA 193
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
++P+V+GMQIQVTR RI+KVTER+PL P R+EDP MNMSR+VVEDPG PG QDVTFA+
Sbjct 194 SSPVVDGMQIQVTRMRIEKVTERVPLAPGNERIEDPTMNMSRQVVEDPGAPGLQDVTFAI 253
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A+VNGVETGRLPVAN V+ PA V+RVG KPGTEVPPV +G WDA+A CEAGGNWAIN
Sbjct 254 AKVNGVETGRLPVANQVIEPARNGVLRVGAKPGTEVPPVSNGHTWDALAQCEAGGNWAIN 313
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNG+YGGVQFDQ TWE NGGLRYAPRADLATREEQIA+A VT+ RQGWGAWPVC+ R G
Sbjct 314 TGNGFYGGVQFDQNTWERNGGLRYAPRADLATREEQIAIATVTQSRQGWGAWPVCSGRIG 373
Query 361 AR 362
AR
Sbjct 374 AR 375
>gi|108801228|ref|YP_641425.1| transglycosylase-like protein [Mycobacterium sp. MCS]
gi|119870379|ref|YP_940331.1| transglycosylase domain-containing protein [Mycobacterium sp.
KMS]
gi|126437208|ref|YP_001072899.1| transglycosylase domain-containing protein [Mycobacterium sp.
JLS]
gi|108771647|gb|ABG10369.1| Transglycosylase-like protein [Mycobacterium sp. MCS]
gi|119696468|gb|ABL93541.1| Transglycosylase domain protein [Mycobacterium sp. KMS]
gi|126237008|gb|ABO00409.1| Transglycosylase domain protein [Mycobacterium sp. JLS]
Length=375
Score = 537 bits (1384), Expect = 8e-151, Method: Compositional matrix adjust.
Identities = 273/361 (76%), Positives = 309/361 (86%), Gaps = 0/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLR+VVGALL+ L FAGGYAVAA KTVTL+VDGT V+TMKSRVID+VEENGF V DRD
Sbjct 14 MLRIVVGALLVALTFAGGYAVAAHKTVTLSVDGTETTVSTMKSRVIDVVEENGFDVGDRD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DL+PAA +V + TIVLRRSRPL ISLDG +QVWTTASTVDEALAQL MTD+APAAA
Sbjct 74 DLFPAADAEVSQSQTIVLRRSRPLDISLDGQHTQQVWTTASTVDEALAQLQMTDSAPAAA 133
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPL GM+LPVV+ KTVQ++DGG +RTV L APNV GLL AAG PL Q D VVPAA
Sbjct 134 SRASRVPLGGMSLPVVTPKTVQIDDGGAIRTVRLAAPNVGGLLEAAGAPLQQRDKVVPAA 193
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+AP+V+GMQIQ+TR R++KVTERLPL P R+ED +NMSR++VE+PG PG QDVTFA+
Sbjct 194 SAPVVDGMQIQITRIRVEKVTERLPLDPANTRIEDVNLNMSRQIVENPGSPGVQDVTFAI 253
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
++VNGVETGRLPVANVVV+PA AV+RVG KPGTEVPPV G WDA+A CEAGGNW+IN
Sbjct 254 SKVNGVETGRLPVANVVVSPAKNAVLRVGAKPGTEVPPVRAGGTWDALAQCEAGGNWSIN 313
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGY+GGVQFDQ TWE NGGLRYAPRADLATREEQIA+AEVTR RQGWGAWP C+ R G
Sbjct 314 TGNGYFGGVQFDQNTWERNGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPTCSGRLG 373
Query 361 A 361
A
Sbjct 374 A 374
>gi|120405751|ref|YP_955580.1| transglycosylase domain-containing protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958569|gb|ABM15574.1| Transglycosylase domain protein [Mycobacterium vanbaalenii PYR-1]
Length=375
Score = 535 bits (1379), Expect = 3e-150, Method: Compositional matrix adjust.
Identities = 267/361 (74%), Positives = 300/361 (84%), Gaps = 0/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+LR++V A LL L AGG AVAA KTVTLTVD +M V TMKSRVID+VEENGF V +RD
Sbjct 14 LLRVLVAATLLALIVAGGTAVAAHKTVTLTVDDVSMAVPTMKSRVIDVVEENGFEVGERD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA VH +DTIVLRRSRPL+IS DG +QVWTTASTVD+ALAQL MTD AP AA
Sbjct 74 DLYPAADTPVHHSDTIVLRRSRPLEISTDGGGTEQVWTTASTVDQALAQLQMTDKAPVAA 133
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SR+PL GMALPVVS K VQ++DGG VR V L APNVA LL AAGVPL QSD V+PAA
Sbjct 134 SRGSRLPLDGMALPVVSPKNVQIDDGGAVRAVRLAAPNVASLLDAAGVPLQQSDTVIPAA 193
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
++P+VEGM+I VTR R+ KVTERLPL PN +R++D +NMSR++VEDPG PG QDVTFAV
Sbjct 194 SSPVVEGMRITVTRVRVAKVTERLPLMPNNQRIDDVTLNMSRQIVEDPGNPGVQDVTFAV 253
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNGVETGRLPVANVV+ PA + V+RVG KPGTEVPPV +G WDA+A CEAGGNWAIN
Sbjct 254 ATVNGVETGRLPVANVVIAPARDGVLRVGAKPGTEVPPVSNGGTWDALARCEAGGNWAIN 313
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGY+GGVQFDQ TWE NGGLRYA RADLATREEQIA+AEVTR RQGWGAWP C+ R G
Sbjct 314 TGNGYFGGVQFDQNTWERNGGLRYAQRADLATREEQIAIAEVTRARQGWGAWPTCSGRIG 373
Query 361 A 361
A
Sbjct 374 A 374
>gi|333989605|ref|YP_004522219.1| resuscitation-promoting factor RpfB [Mycobacterium sp. JDM601]
gi|333485573|gb|AEF34965.1| resuscitation-promoting factor RpfB [Mycobacterium sp. JDM601]
Length=369
Score = 535 bits (1378), Expect = 4e-150, Method: Compositional matrix adjust.
Identities = 261/358 (73%), Positives = 306/358 (86%), Gaps = 0/358 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLR++VGALLLVL FAGG+AVA+ KTVTL VDGT + VTTM+SRVID+V ENGF + +RD
Sbjct 11 MLRMLVGALLLVLTFAGGFAVASAKTVTLDVDGTPVTVTTMRSRVIDVVAENGFDLGERD 70
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
D+ PA +VHDADTIV+RRSRPLQ+SLDG ++ QVWTTA +VDEALAQL+MTDTAPAAA
Sbjct 71 DVTPARDARVHDADTIVVRRSRPLQLSLDGRESTQVWTTALSVDEALAQLSMTDTAPAAA 130
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SR SRVPL+GMALPV+SAK V+++DGG+VRTV L A NVA LL+A G PL Q+D V P A
Sbjct 131 SRGSRVPLAGMALPVLSAKNVRIDDGGVVRTVRLAARNVAELLAADGTPLEQADKVSPPA 190
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+ PI EGM+IQVTR R+ VTER+PLPP ARRVEDP MN+SR+VVEDPG PGTQDVT++V
Sbjct 191 STPITEGMEIQVTRIRVTHVTERVPLPPTARRVEDPAMNISRQVVEDPGTPGTQDVTYSV 250
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
A VNG ETGRLPV+N VV PA ++V+RVG KPGTEVPP + G+ WD IA CE+ NWAIN
Sbjct 251 ATVNGAETGRLPVSNAVVDPARDSVLRVGAKPGTEVPPSVYGAAWDRIAACESHNNWAIN 310
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAAR 358
TGNG+YGGVQFD GTW ANGGL+YAPRADLATREEQIA+AEVT+ RQGWGAWPVC+ R
Sbjct 311 TGNGFYGGVQFDYGTWIANGGLKYAPRADLATREEQIAIAEVTQARQGWGAWPVCSGR 368
>gi|289757092|ref|ZP_06516470.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T85]
gi|289712656|gb|EFD76668.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T85]
Length=268
Score = 528 bits (1359), Expect = 8e-148, Method: Compositional matrix adjust.
Identities = 268/268 (100%), Positives = 268/268 (100%), Gaps = 0/268 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRV 268
AEVNGVETGRLPVANVVVTPAHEAVVRV
Sbjct 241 AEVNGVETGRLPVANVVVTPAHEAVVRV 268
>gi|145222522|ref|YP_001133200.1| transglycosylase domain-containing protein [Mycobacterium gilvum
PYR-GCK]
gi|145215008|gb|ABP44412.1| Transglycosylase domain protein [Mycobacterium gilvum PYR-GCK]
Length=375
Score = 519 bits (1336), Expect = 4e-145, Method: Compositional matrix adjust.
Identities = 257/361 (72%), Positives = 293/361 (82%), Gaps = 0/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+LR VV +LL L FAGG AVA KTVTL VDG ++ V TMKSRVID+V ENGF V +RD
Sbjct 14 LLRCVVAGILLALVFAGGTAVATHKTVTLEVDGASVTVPTMKSRVIDVVTENGFDVGERD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAA V+ +DTIVLRRSRPL+IS DG +QVWTTASTVDEALAQL MTD AP AA
Sbjct 74 DLYPAADTPVNQSDTIVLRRSRPLEISTDGGGTEQVWTTASTVDEALAQLQMTDKAPVAA 133
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASR+PL GM LPVVS + VQ+ D G +R V L APNV LL A+G PL QSD V+PAA
Sbjct 134 SRASRLPLDGMELPVVSPRNVQIEDAGQMRFVRLAAPNVGALLEASGAPLQQSDAVIPAA 193
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+ PI +GM I+VTR R+ KVTERLPL PN +RVED +NMSR++VE+PGVPG QDVTFAV
Sbjct 194 STPITDGMHIRVTRVRVAKVTERLPLNPNNQRVEDVNLNMSRQIVENPGVPGVQDVTFAV 253
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
+ +NGVETGRLPVANVV+TPA + V+RVG KPGTEVP V +G WDA+A CEAGGNW+IN
Sbjct 254 STINGVETGRLPVANVVITPAVDGVLRVGAKPGTEVPEVRNGGTWDALARCEAGGNWSIN 313
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGY+GGVQFDQ TWE NGGLRYA RADLATREEQIA+AEVTR RQGWGAWP C+ R G
Sbjct 314 TGNGYFGGVQFDQNTWERNGGLRYAQRADLATREEQIAIAEVTRARQGWGAWPTCSGRIG 373
Query 361 A 361
A
Sbjct 374 A 374
>gi|315442970|ref|YP_004075849.1| hypothetical protein Mspyr1_13350 [Mycobacterium sp. Spyr1]
gi|315261273|gb|ADT98014.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
Length=358
Score = 513 bits (1322), Expect = 2e-143, Method: Compositional matrix adjust.
Identities = 254/357 (72%), Positives = 290/357 (82%), Gaps = 0/357 (0%)
Query 5 VVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYP 64
+V +LL L FAGG AVA KTVTL VDG ++ V TMKSRVID+V ENGF V +RDDLYP
Sbjct 1 MVAGILLALVFAGGTAVATHKTVTLEVDGASVTVPTMKSRVIDVVTENGFDVGERDDLYP 60
Query 65 AAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRAS 124
AA V+ +DTIVLRRSRPL+IS DG +QVWTTASTVDEALAQL MTD AP AASRAS
Sbjct 61 AADTPVNQSDTIVLRRSRPLEISTDGGGTEQVWTTASTVDEALAQLQMTDKAPVAASRAS 120
Query 125 RVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPI 184
R+PL GM LPVVS + VQ+ D G +R V L APNV LL A+G PL QSD V+PAA+ PI
Sbjct 121 RLPLDGMELPVVSPRNVQIEDAGQMRFVRLAAPNVGALLEASGAPLQQSDAVIPAASTPI 180
Query 185 VEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVN 244
+GM I+VTR R+ KVTERLPL PN +RVED +NMSR++VE+PGVPG QDVTFAV+ +N
Sbjct 181 TDGMHIRVTRVRVAKVTERLPLNPNNQRVEDVNLNMSRQIVENPGVPGVQDVTFAVSTIN 240
Query 245 GVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNG 304
GVETGRLPVANVV+TPA + V+RVG KPGTEVP V +G WDA+A CEAGGNW+INTGNG
Sbjct 241 GVETGRLPVANVVITPAVDGVLRVGAKPGTEVPEVRNGGTWDALARCEAGGNWSINTGNG 300
Query 305 YYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGA 361
Y+GGVQFDQ TWE NGGLRYA RADLATREEQIA+AEVTR RQGWGAWP C+ R GA
Sbjct 301 YFGGVQFDQNTWERNGGLRYAQRADLATREEQIAIAEVTRARQGWGAWPTCSGRIGA 357
>gi|169628223|ref|YP_001701872.1| hypothetical protein MAB_1130 [Mycobacterium abscessus ATCC 19977]
gi|169240190|emb|CAM61218.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length=375
Score = 457 bits (1175), Expect = 2e-126, Method: Compositional matrix adjust.
Identities = 222/338 (66%), Positives = 268/338 (80%), Gaps = 0/338 (0%)
Query 25 KTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLRRSRPL 84
KT+TL VDG AM VTT+KSRV +++ + G+++ DRDD+ PA V D DTIVL+RSRPL
Sbjct 38 KTLTLNVDGNAMTVTTVKSRVSEVLADYGYALSDRDDVAPAKHDSVRDGDTIVLKRSRPL 97
Query 85 QISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAKTVQLN 144
IS+DG D +QVWTTASTV++AL+QL+MTDTAP AA+R SR+PL GM+L VVSAKTVQLN
Sbjct 98 DISVDGQDTQQVWTTASTVNDALSQLSMTDTAPTAATRGSRLPLEGMSLAVVSAKTVQLN 157
Query 145 DGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIKKVTERL 204
DGG++ T + AP V LL A G PL Q D V PA + P+ M I VTR R+ KVTE+
Sbjct 158 DGGVISTPRIAAPTVGALLEATGNPLQQFDTVDPAPSTPVTADMPITVTRIRVSKVTEQA 217
Query 205 PLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVANVVVTPAHEA 264
PL P +++EDPEMNMSR VV+DPG PGTQD+ ++V VNG ETGR+PV+N V+TPA ++
Sbjct 218 PLAPTPQKIEDPEMNMSRSVVQDPGAPGTQDIVYSVLSVNGRETGRMPVSNNVLTPARDS 277
Query 265 VVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEANGGLRY 324
V+RVG KPGTEVP V GS WDA+A CEAGGNWAINTGNG+YGGVQFD GTW A+GG +Y
Sbjct 278 VLRVGAKPGTEVPAVTRGSAWDALAQCEAGGNWAINTGNGFYGGVQFDYGTWLAHGGGKY 337
Query 325 APRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 362
APRADLATREEQIA+AE T QGWGAWPVC+AR GAR
Sbjct 338 APRADLATREEQIAIAEKTLSAQGWGAWPVCSARVGAR 375
>gi|126434279|ref|YP_001069970.1| transglycosylase domain-containing protein [Mycobacterium sp.
JLS]
gi|126234079|gb|ABN97479.1| Transglycosylase domain protein [Mycobacterium sp. JLS]
Length=547
Score = 448 bits (1152), Expect = 7e-124, Method: Compositional matrix adjust.
Identities = 225/356 (64%), Positives = 272/356 (77%), Gaps = 0/356 (0%)
Query 3 RLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDL 62
R +VGA+L+ L AGGY VAA K VTL+VDG + V+TMKSRV+D++ +NG++V + D++
Sbjct 189 RALVGAILVALMCAGGYTVAATKRVTLSVDGVSTTVSTMKSRVVDVLRDNGYAVGEHDEI 248
Query 63 YPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASR 122
PAA V ADTIVLRR+RPLQ+S+DG QVWTTA TV +AL QL+M D AP ASR
Sbjct 249 SPAADQSVRAADTIVLRRARPLQVSVDGRPGGQVWTTALTVGDALTQLSMHDVAPVTASR 308
Query 123 ASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATA 182
ASRVP++GMALPVV+ K V++ND G+VR L A V LL AAG PL Q+D V P A+
Sbjct 309 ASRVPVAGMALPVVTPKRVRINDAGVVRERRLAAATVGRLLDAAGAPLHQTDRVTPPAST 368
Query 183 PIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAE 242
P+V GMQI VTR R+ KV+ERLPLP RR+ DP +N+SR VV+DPG GTQDVTFAV+
Sbjct 369 PVVAGMQIVVTRIRVHKVSERLPLPAPLRRIHDPSINISRRVVDDPGKAGTQDVTFAVST 428
Query 243 VNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTG 302
VNG TGR +A +VTPA V RVG KPGT VPPV D + WDA+A CE+ GNWAINTG
Sbjct 429 VNGRVTGRQVLARSIVTPARPQVQRVGAKPGTTVPPVHDNATWDALAFCESSGNWAINTG 488
Query 303 NGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAAR 358
NG+YGGVQF Q TWE+ GGLRYAPRADLATREEQIA+AE+T+ QGWGAWPVC+ R
Sbjct 489 NGFYGGVQFTQSTWESFGGLRYAPRADLATREEQIAIAELTQAGQGWGAWPVCSRR 544
>gi|108798680|ref|YP_638877.1| transglycosylase-like protein [Mycobacterium sp. MCS]
gi|119867797|ref|YP_937749.1| transglycosylase domain-containing protein [Mycobacterium sp.
KMS]
gi|108769099|gb|ABG07821.1| Transglycosylase-like protein [Mycobacterium sp. MCS]
gi|119693886|gb|ABL90959.1| Transglycosylase domain protein [Mycobacterium sp. KMS]
Length=348
Score = 434 bits (1116), Expect = 1e-119, Method: Compositional matrix adjust.
Identities = 216/343 (63%), Positives = 261/343 (77%), Gaps = 0/343 (0%)
Query 16 AGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADT 75
AGGYAV A K VTL+VDG + V+TMKSRV+D++ +NG++V + D++ P A V ADT
Sbjct 3 AGGYAVVATKRVTLSVDGVSTTVSTMKSRVVDVLRDNGYAVGEHDEISPVADQSVRAADT 62
Query 76 IVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPV 135
IVLRR+RPLQ+S+DG QVWTTA TV +AL QL+M D P ASRASRVP++GMALPV
Sbjct 63 IVLRRARPLQVSVDGRPGGQVWTTALTVGDALTQLSMHDVEPVTASRASRVPVAGMALPV 122
Query 136 VSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRN 195
V+ K V++NDGG+V L A V LL AAG PL Q+D V P A+ P+V GMQI VTR
Sbjct 123 VTPKRVRINDGGVVSERRLAAATVGRLLDAAGAPLQQTDRVTPPASTPVVAGMQIVVTRI 182
Query 196 RIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVAN 255
R+ KV+ERLPLP RR+ DP +N+SR VV+DPG GTQDVTFA++ VNG TGR +A
Sbjct 183 RVHKVSERLPLPAPLRRIHDPSINISRRVVDDPGKAGTQDVTFAISTVNGRVTGRQVLAR 242
Query 256 VVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGT 315
+VTPA V RVG KPGT VPPV D + WDA+A CE+ GNWAINTGNG+YGGVQF Q T
Sbjct 243 SIVTPARPQVQRVGAKPGTTVPPVHDNATWDALAFCESSGNWAINTGNGFYGGVQFTQST 302
Query 316 WEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAAR 358
WE+ GGLRYAPRADLATREEQIA+AE+T+ QGWGAWPVC+ R
Sbjct 303 WESFGGLRYAPRADLATREEQIAIAELTQAGQGWGAWPVCSRR 345
>gi|289749538|ref|ZP_06508916.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T92]
gi|289690125|gb|EFD57554.1| resuscitation-promoting factor rpfB [Mycobacterium tuberculosis
T92]
Length=236
Score = 425 bits (1093), Expect = 5e-117, Method: Compositional matrix adjust.
Identities = 216/216 (100%), Positives = 216/216 (100%), Gaps = 0/216 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD
Sbjct 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA
Sbjct 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA
Sbjct 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAA 180
Query 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDP 216
TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDP
Sbjct 181 TAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDP 216
>gi|229494932|ref|ZP_04388683.1| resuscitation-promoting factor RpfB [Rhodococcus erythropolis
SK121]
gi|229318156|gb|EEN84026.1| resuscitation-promoting factor RpfB [Rhodococcus erythropolis
SK121]
Length=375
Score = 384 bits (986), Expect = 1e-104, Method: Compositional matrix adjust.
Identities = 200/361 (56%), Positives = 251/361 (70%), Gaps = 2/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L + ALLL + G AV KT+TL VDG +R++TM + V +E+ G+ + D+D
Sbjct 14 LLYSAIAALLLTVLVGGVLAVVRHKTITLDVDGEQIRLSTMSTNVDGALEDAGYPIGDKD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PAA + D DT+VLRR+R + +++DG K +WTTA TVD+AL QL ++ +A
Sbjct 74 AVAPAADASLSDGDTVVLRRAREITLTVDGQPQK-LWTTALTVDDALKQLDVSADVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDG-GLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL G AL V++ +L DG V + AP V L+A G PL QSD VVPA
Sbjct 133 SRSQRLPLDGAALDVLTPVVAKLVDGANAAADVRIAAPTVGEFLTANGTPLEQSDTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A AP+ EG+++ VTRNR + E LPL P +R+EDP MN SR +VE+PGVPG +DVTFA
Sbjct 193 ADAPLTEGLEVTVTRNRTENKVETLPLDPPDQRIEDPTMNQSRTIVENPGVPGVRDVTFA 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR VA + TPA VVRVGTKPGTEVPPV +GS WDA+A CEA GNWAI
Sbjct 253 VNLVNGVEAGRTQVAETITTPAQPKVVRVGTKPGTEVPPVENGSTWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGGVQFDQ TWE GGL+YAPRADLATREEQIA+A T+ QGWGAWP C+ R
Sbjct 313 NTGNGFYGGVQFDQNTWERQGGLKYAPRADLATREEQIAIATQTQRTQGWGAWPSCSGRL 372
Query 360 G 360
G
Sbjct 373 G 373
>gi|111022635|ref|YP_705607.1| hypothetical protein RHA1_ro05670 [Rhodococcus jostii RHA1]
gi|110822165|gb|ABG97449.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=375
Score = 383 bits (984), Expect = 2e-104, Method: Compositional matrix adjust.
Identities = 198/363 (55%), Positives = 247/363 (69%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L VV LL L G AV KTVTL VDG + ++TM + V + + G+S++DRD
Sbjct 14 LLYTVVALLLATLIAGGVMAVVRHKTVTLDVDGEKISLSTMTTSVDAALSDAGYSINDRD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ P + D DT+VLRR+R + +++DG K VWTTA TV++AL Q + + +A
Sbjct 74 AVAPERDASLSDGDTVVLRRAREVTLTVDGQ-PKTVWTTALTVEDALKQFELGEDVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGL-VRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL G AL V++ V L DG L V V + AP V L+A G PL Q+D VVPA
Sbjct 133 SRSQRLPLDGAALEVLNPLVVTLADGALPVTDVRMAAPTVGEFLAAHGAPLEQADTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ EGM + VTR+R + E LPL P +R+EDP MN SR V+E+PGVPG QD+TFA
Sbjct 193 ADTPLTEGMAVTVTRDRTETKVETLPLAPEEQRIEDPTMNKSRTVLENPGVPGVQDITFA 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNG E GR V+ V TPA V+RVG KPGTEVPPV +GS+WDA+A CEA GNWAI
Sbjct 253 VNTVNGREVGRNQVSATVTTPAQPKVIRVGAKPGTEVPPVENGSVWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG++GGVQFDQ TWE GGL+YAPRADLATREEQIAVA T+ QGWGAWP C+ R
Sbjct 313 NTGNGFFGGVQFDQNTWERQGGLKYAPRADLATREEQIAVASQTQKTQGWGAWPSCSGRL 372
Query 360 GAR 362
G R
Sbjct 373 GVR 375
>gi|226307848|ref|YP_002767808.1| resuscitation-promoting factor [Rhodococcus erythropolis PR4]
gi|226186965|dbj|BAH35069.1| probable resuscitation-promoting factor [Rhodococcus erythropolis
PR4]
Length=375
Score = 381 bits (978), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 198/361 (55%), Positives = 250/361 (70%), Gaps = 2/361 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L + ALLL + G AV KT+TL VDG + ++TM + V +E+ G+ + D+D
Sbjct 14 LLYSAIAALLLTVLVGGVLAVVRHKTITLDVDGEQIHLSTMSTNVDGALEDAGYPIGDKD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PAA + D DT+VLRR+R + +++DG K +WTTA TVD+AL QL ++ +A
Sbjct 74 AVAPAADASLSDGDTVVLRRAREITLTVDGQPQK-LWTTALTVDDALKQLDVSADVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDG-GLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL G AL V++ +L DG V + AP V L+A G PL QSD VVPA
Sbjct 133 SRSQRLPLDGAALDVLTPVVAKLVDGANAAADVRIAAPTVGEFLTANGTPLEQSDTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A AP+ EG+++ VTRNR + E LPL P +R+EDP MN SR +VE+PGVPG +DVTFA
Sbjct 193 ADAPLTEGLEVTVTRNRTENKVETLPLDPPDQRIEDPTMNQSRTIVENPGVPGVRDVTFA 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR V+ + TPA VVRVGTKPGTEVPPV +GS WDA+A CEA GNWAI
Sbjct 253 VNLVNGVEAGRTQVSETITTPAQPKVVRVGTKPGTEVPPVENGSTWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGGVQFDQ TWE GGL+YAPRADLATREEQIA+A T+ QGWGAWP C+ R
Sbjct 313 NTGNGFYGGVQFDQNTWERQGGLKYAPRADLATREEQIAIATQTQRTQGWGAWPSCSGRL 372
Query 360 G 360
G
Sbjct 373 G 373
>gi|226365141|ref|YP_002782924.1| resuscitation-promoting factor [Rhodococcus opacus B4]
gi|226243631|dbj|BAH53979.1| resuscitation-promoting factor [Rhodococcus opacus B4]
Length=375
Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust.
Identities = 202/363 (56%), Positives = 247/363 (69%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L VV LL L G AV K VTL VDG ++TM + V + + G+S+ DRD
Sbjct 14 LLYTVVALLLATLIAGGVMAVVRHKNVTLDVDGETTSLSTMTTSVDAALADAGYSISDRD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ P + D DT+VLRR+R + +S+DG K VWTTA TV++AL Q + + +A
Sbjct 74 VVAPERDATLSDGDTVVLRRAREVSLSVDGQ-PKTVWTTALTVEDALKQFDLGEDVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGL-VRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL G AL V++ V+L DG L V V + AP V L+A G PL Q+D VVPA
Sbjct 133 SRSQRLPLDGAALDVLNPLVVKLADGALPVTDVRMAAPTVGEFLAAHGAPLEQADTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ EGM + VTR+R + E LPLPP +R+EDP MNMSR VVE+PGVPG QDVTFA
Sbjct 193 ADTPLAEGMDVTVTRDRTEAKVETLPLPPEEQRIEDPTMNMSRTVVENPGVPGVQDVTFA 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNG E GR V+ V TPA V+RVG KPGTEVPPV +GS+WDA+A CEA GNWAI
Sbjct 253 VNTVNGKEVGRNQVSATVTTPAQPKVIRVGAKPGTEVPPVENGSVWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG++GGVQFDQ TWE GGL+YAPRADLATREEQIAVA T+ QGWGAWP C+ R
Sbjct 313 NTGNGFFGGVQFDQNTWERQGGLKYAPRADLATREEQIAVASKTQKTQGWGAWPTCSGRL 372
Query 360 GAR 362
G R
Sbjct 373 GVR 375
>gi|325676280|ref|ZP_08155959.1| resuscitation-promoting factor RpfB [Rhodococcus equi ATCC 33707]
gi|325552841|gb|EGD22524.1| resuscitation-promoting factor RpfB [Rhodococcus equi ATCC 33707]
Length=375
Score = 371 bits (953), Expect = 9e-101, Method: Compositional matrix adjust.
Identities = 195/363 (54%), Positives = 244/363 (68%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
++ VV A L+ L GG AVA KTVT+ VDG + V TM S+V + G+SV + D
Sbjct 14 LMYGVVAATLVTLTVGGGVAVAQHKTVTVDVDGELITVGTMSSKVDGALAAAGYSVGEHD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PA+ + D DT+VLRR R + +++DG + VWTTA TVDEAL Q + +A
Sbjct 74 VVAPASDSDLDDGDTVVLRRGREVALTVDGRQ-RTVWTTALTVDEALNQFRLAGDVQVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
+R+ R+PL G L V+S +TV+L DG V L AP V L+A G PL Q+D V PA
Sbjct 133 NRSQRLPLEGSDLDVLSPRTVKLIDGASAPVDVRLAAPTVGDFLAAHGTPLEQADTVEPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ +GM++ VTR R++ P+ P +R+EDP MNMSR VVE+PG G DVT+
Sbjct 193 AETPLADGMEVAVTRGRVETRVLTEPVAPPEQRIEDPSMNMSRTVVENPGTAGVADVTYE 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVETGR PVA+ V PA VVRVG KPGTEVPPV +G+ WDA+A CEA GNWAI
Sbjct 253 VTTVNGVETGRKPVASTVTVPAQPKVVRVGAKPGTEVPPVQNGATWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGGVQFDQ TWE GGL+YAPRADLATREEQIA+A T+ QGWGAWP C ++
Sbjct 313 NTGNGFYGGVQFDQNTWERQGGLKYAPRADLATREEQIAIASRTQQTQGWGAWPSCTSKL 372
Query 360 GAR 362
G R
Sbjct 373 GLR 375
>gi|312138651|ref|YP_004005987.1| resuscitation-promoting factor rpfb [Rhodococcus equi 103S]
gi|311887990|emb|CBH47302.1| putative resuscitation-promoting factor rpfB [Rhodococcus equi
103S]
Length=375
Score = 370 bits (951), Expect = 1e-100, Method: Compositional matrix adjust.
Identities = 195/363 (54%), Positives = 244/363 (68%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
++ VV A L+ L GG AVA KTVT+ VDG + V TM S+V + G+SV + D
Sbjct 14 LMYGVVAATLVTLTVGGGVAVAQHKTVTVDVDGELITVGTMSSKVDGALAAAGYSVGEHD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PA+ + D DT+VLRR R + +++DG + VWTTA TVDEAL Q + +A
Sbjct 74 VVAPASDSDLDDGDTVVLRRGREVALTVDGRQ-RTVWTTALTVDEALNQFRLAGDVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
+R+ R+PL G L V+S +TV+L DG V L AP V L+A G PL Q+D V PA
Sbjct 133 NRSQRLPLEGSDLDVLSPRTVKLIDGTSAPVDVRLAAPTVGDFLAAHGTPLEQADTVEPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ +GM++ VTR R++ P+ P +R+EDP MNMSR VVE+PG G DVT+
Sbjct 193 AETPLADGMEVAVTRGRVETRVLTEPVAPPEQRIEDPSMNMSRTVVENPGTAGVADVTYE 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVETGR PVA+ V PA VVRVG KPGTEVPPV +G+ WDA+A CEA GNWAI
Sbjct 253 VTTVNGVETGRKPVASTVTVPAQPKVVRVGAKPGTEVPPVQNGATWDALAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGGVQFDQ TWE GGL+YAPRADLATREEQIA+A T+ QGWGAWP C ++
Sbjct 313 NTGNGFYGGVQFDQNTWERQGGLKYAPRADLATREEQIAIASRTQQTQGWGAWPSCTSKL 372
Query 360 GAR 362
G R
Sbjct 373 GLR 375
>gi|54026878|ref|YP_121120.1| hypothetical protein nfa49040 [Nocardia farcinica IFM 10152]
gi|54018386|dbj|BAD59756.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=375
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 192/342 (57%), Positives = 229/342 (67%), Gaps = 2/342 (0%)
Query 20 AVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDLYPAAGVQVHDADTIVLR 79
A+ KTVT+ VDG TTM V ++ GF V DRD + P G V D TIVL
Sbjct 33 AIVNRKTVTVVVDGQQTVQTTMSRNVAGVLRAAGFEVTDRDLVRPGLGAAVVDGATIVLN 92
Query 80 RSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASRASRVPLSGMALPVVSAK 139
R+R + +++DG ++VWTT T EAL QL + A + R +PLSG AL V + +
Sbjct 93 RAREVALTVDGA-VRKVWTTGLTAGEALEQLKLPADAYVSPGRDKPLPLSGAALTVATPR 151
Query 140 TVQLNDG-GLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATAPIVEGMQIQVTRNRIK 198
TV L DG G V L AP V LS AGVPL++ D V PA P+ +G+++ VTR RI+
Sbjct 152 TVSLLDGAGAPVDVRLAAPTVGEFLSVAGVPLVEQDTVEPAPDTPLADGLRVVVTRKRIE 211
Query 199 KVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPVANVVV 258
K+TE LPL P +EDP MNMSR VVE GVPG DVTF++ +VNG E R PV +VV
Sbjct 212 KLTETLPLDPPENVIEDPTMNMSRTVVESEGVPGVHDVTFSITKVNGAEVERTPVESVVK 271
Query 259 TPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQGTWEA 318
PA VR G KPGTEVPPV DG+IWDA+A CE+ GNWAINTGNGYYGG+QFDQ TWE
Sbjct 272 VPAQPKTVRKGAKPGTEVPPVRDGAIWDALAQCESNGNWAINTGNGYYGGIQFDQSTWER 331
Query 319 NGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
GGLRYAPRADLATREEQIA+AEVTR RQGWGAWP C +R G
Sbjct 332 QGGLRYAPRADLATREEQIAIAEVTRARQGWGAWPACTSRLG 373
>gi|220702457|pdb|3EO5|A Chain A, Crystal Structure Of The Resuscitation Promoting Factor
Rpfb
Length=171
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 169/169 (100%), Positives = 169/169 (100%), Gaps = 0/169 (0%)
Query 194 RNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPV 253
RNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPV
Sbjct 3 RNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAEVNGVETGRLPV 62
Query 254 ANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQ 313
ANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQ
Sbjct 63 ANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINTGNGYYGGVQFDQ 122
Query 314 GTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 362
GTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR
Sbjct 123 GTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGAR 171
>gi|226365140|ref|YP_002782923.1| resuscitation-promoting factor [Rhodococcus opacus B4]
gi|226243630|dbj|BAH53978.1| resuscitation-promoting factor [Rhodococcus opacus B4]
Length=371
Score = 342 bits (877), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 183/363 (51%), Positives = 243/363 (67%), Gaps = 6/363 (1%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L +VV ALL L G AVA KTVTL VDG + + TM S V +++ G++V +RD
Sbjct 14 LLYVVVAALLATLVVGGALAVARHKTVTLDVDGETVSLGTMASDVSGALDDAGYTVSERD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PAA + D DT+VLRR+R + +++DG K VWTTA TVD+AL Q + D +A
Sbjct 74 AVAPAADASISDGDTVVLRRAREIDLTVDGQ-PKTVWTTALTVDDALKQFELADDVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL G +L VV+AK V++ DGG T V L AP V LL+A G PL Q+D VVP
Sbjct 133 SRSERLPLEGTSLEVVNAKLVKVADGGAPLTDVRLAAPTVGELLAANGAPLEQADTVVPP 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A AP+VEG +I VTR+R + TE LP+ P RV+DP ++ + VVE+PGVPG + VT +
Sbjct 193 ADAPVVEGAEIHVTRDRTETRTETLPIAPPENRVDDPALDKGKTVVENPGVPGERTVTAS 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR +++ V+ A+V+VG K + + S WD+IA CEA GNWAI
Sbjct 253 VKTVNGVEAGRQELSSTVLREPAPALVKVGVKE----LAISNASTWDSIAHCEATGNWAI 308
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG++GG+QF Q TWEA GG +YA RADLA+RE+QI+VAE + QGWGAWP C ++
Sbjct 309 NTGNGFFGGLQFTQSTWEAFGGTQYASRADLASREQQISVAEKVQAAQGWGAWPACTSKL 368
Query 360 GAR 362
G R
Sbjct 369 GLR 371
>gi|111022634|ref|YP_705606.1| hypothetical protein RHA1_ro05669 [Rhodococcus jostii RHA1]
gi|110822164|gb|ABG97448.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=371
Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 184/363 (51%), Positives = 242/363 (67%), Gaps = 6/363 (1%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L +VV ALL L G AVA KT+TL VDG + + TM S V +++ G++V +RD
Sbjct 14 LLYVVVAALLATLVVGGALAVARHKTITLDVDGETISLGTMASDVGGALDDAGYAVSERD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ PAA + D DT+VLRR+R + +++DG K VWTTA TVD+AL Q + D +A
Sbjct 74 AVAPAADASLSDGDTVVLRRAREIDLTVDGQ-PKTVWTTALTVDDALKQFELADDVHVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SRA R+PL G AL VV+AK V++ DGG T V L AP V LL+A G PL Q+D VVP
Sbjct 133 SRAERLPLEGTALEVVNAKLVKVADGGAPLTDVRLAAPTVGELLAANGAPLEQADTVVPP 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A AP+VEG +I VTR+R + TE LP+ P RVEDP ++ + VV +PGVPG + VT +
Sbjct 193 ADAPVVEGAEIHVTRDRTETRTETLPIAPPENRVEDPALDKGKTVVANPGVPGERTVTAS 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR +++ V+ A+V+VG K + + S WD+IA CEA GNWAI
Sbjct 253 VKTVNGVEAGRQELSSQVLREPAPALVKVGVKELA----ISNASTWDSIAHCEATGNWAI 308
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG++GG+QF Q TWEA GG +YA RADLA+RE+QI+VAE + QGWGAWP C ++
Sbjct 309 NTGNGFFGGLQFTQSTWEAFGGSQYAARADLASREQQISVAEKVQAAQGWGAWPACTSKL 368
Query 360 GAR 362
G R
Sbjct 369 GLR 371
>gi|229494947|ref|ZP_04388698.1| resuscitation-promoting factor RpfB [Rhodococcus erythropolis
SK121]
gi|229318171|gb|EEN84041.1| resuscitation-promoting factor RpfB [Rhodococcus erythropolis
SK121]
Length=374
Score = 338 bits (866), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 183/363 (51%), Positives = 233/363 (65%), Gaps = 3/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L VVGALLL L G AV KT+TL VDG + ++TM S V +E+ G+ VD +D
Sbjct 14 LLYSVVGALLLTLIVGGALAVVRHKTITLDVDGDMISLSTMSSSVGTALEDAGYPVDPKD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
L P+A + D DT+VLRR+R L +++DG +WTTA TVDEAL Q+ ++D +A
Sbjct 74 ALAPSADSSLSDGDTVVLRRARELALTVDGQ-PTTIWTTALTVDEALKQVDVSDDFAVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGL-VRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL L VVS KTV ++DGG V L A V LL+A PL Q+D VVP
Sbjct 133 SRSHRLPLERTELDVVSPKTVSVSDGGAPAAEVKLAAVTVGDLLAAKNAPLEQADSVVPT 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ G+ IQVTR+R E P+ P +VEDPE+ + VVE+PGVPG + T
Sbjct 193 ADTPVTNGLTIQVTRDRTDTRVETQPIAPPENKVEDPELEKDKTVVENPGVPGERTATVQ 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR ++ V+ AVV+VGTK + P V + S WDAIA CEA GNWAI
Sbjct 253 VKTVNGVEAGRTELSATVIKEPVAAVVKVGTKQAS-APAVSNASTWDAIAQCEATGNWAI 311
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGG+QF Q TWEA GG +YA RADLA+RE+QIA+ E R QGWGAWP C ++
Sbjct 312 NTGNGFYGGLQFTQSTWEAFGGGQYAARADLASREQQIAIGEKVRAGQGWGAWPSCTSKL 371
Query 360 GAR 362
G R
Sbjct 372 GLR 374
>gi|226307849|ref|YP_002767809.1| resuscitation-promoting factor [Rhodococcus erythropolis PR4]
gi|226186966|dbj|BAH35070.1| probable resuscitation-promoting factor [Rhodococcus erythropolis
PR4]
Length=374
Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 181/363 (50%), Positives = 232/363 (64%), Gaps = 3/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L VVGALLL L G AV KT+TL VDG + ++TM S V +E+ G+ VD +D
Sbjct 14 LLYSVVGALLLTLIVGGALAVVRHKTITLDVDGDMISLSTMSSSVGTALEDAGYPVDPKD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
L P+A + D DT+VLRR+R L +++DG +WTTA TVDEAL Q+ ++D +A
Sbjct 74 ALAPSADSSLSDGDTVVLRRARELALTVDGQ-PTTIWTTALTVDEALKQVDVSDDFAVSA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGL-VRTVHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR+ R+PL L VVS KTV ++DGG + L A V LL+A PL Q+D VVP
Sbjct 133 SRSHRLPLERTELDVVSPKTVSVSDGGAPAAEIKLAAVTVGELLAAKNAPLEQADSVVPT 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
A P+ G+ IQVTR+R E P+ P +VEDPE+ + VVE+PGV G + T
Sbjct 193 ADTPVTNGLTIQVTRDRTDTRVETQPIAPPENKVEDPELEKDKTVVENPGVAGERTATVE 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNGVE GR ++ V+ AVV+VGTK T P V + S WD+IA CEA GNWAI
Sbjct 253 VKTVNGVEAGRTELSATVIKEPVAAVVKVGTKQ-TSAPAVSNASTWDSIAQCEATGNWAI 311
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
NTGNG+YGG+QF Q TWEA GG +YA RADLA+RE+QIA+ E R QGWGAWP C ++
Sbjct 312 NTGNGFYGGLQFTQSTWEAFGGGQYAARADLASREQQIAIGEKVRAGQGWGAWPSCTSKL 371
Query 360 GAR 362
G R
Sbjct 372 GLR 374
>gi|312138650|ref|YP_004005986.1| g5 domain transglycosylase [Rhodococcus equi 103S]
gi|311887989|emb|CBH47301.1| putative G5 domain transglycosylase [Rhodococcus equi 103S]
Length=375
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/363 (47%), Positives = 233/363 (65%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L +VV AL L GG V KT+TL VDG + ++T++S V +++ G+ + + D
Sbjct 14 LLYVVVAALFATLLVGGGLVVTQHKTITLDVDGDQISLSTLRSEVGSVLDNAGYPIGEHD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ P+ ++ D DT+VLRR+R + +++DG + + VW+TA TVD+A+ QL A A+A
Sbjct 74 VVAPSVDAKLSDGDTVVLRRAREIVLTVDG-ERRTVWSTALTVDDAMRQLNFAGDAYASA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR R+PL G+ VV+AK V+++D G V + AP V LL VPL Q+D VVPA
Sbjct 133 SRGQRIPLDGIEFDVVNAKAVRISDNGAPHADVRVAAPTVGALLDVTNVPLEQADTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
P+ +G++I VTRNR + TE P+ RV+DP + + VE+PG PG + VT
Sbjct 193 PETPLTDGLEIVVTRNRTETRTETQPIQAPENRVDDPGLEQGKTTVENPGTPGERTVTVT 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNG ET R +++VVV AVVRVGTKP P V GS+WD++A CEA GNWAI
Sbjct 253 VTTVNGAETDRRELSSVVVREPAPAVVRVGTKPKPSAPAVASGSVWDSLAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
+ GNG+YGG+QF Q TW A GG +YAP AD A+RE+QIAVAE + QGWGAWP C+++
Sbjct 313 SNGNGFYGGLQFSQSTWAAYGGTQYAPTADRASREQQIAVAEKVQAAQGWGAWPSCSSKL 372
Query 360 GAR 362
G R
Sbjct 373 GLR 375
>gi|325676281|ref|ZP_08155960.1| resuscitation-promoting factor RpfB [Rhodococcus equi ATCC 33707]
gi|325552842|gb|EGD22525.1| resuscitation-promoting factor RpfB [Rhodococcus equi ATCC 33707]
Length=375
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 167/363 (47%), Positives = 232/363 (64%), Gaps = 2/363 (0%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
+L +VV AL L GG V KT+TL VDG + ++T++S V +++ G+ + + D
Sbjct 14 LLYVVVAALFATLLVGGGLVVTQHKTITLDVDGDQISLSTLRSEVGSVLDNAGYPIGEHD 73
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ P+ ++ D DT+VLRR+R + +++DG + + VW+TA TVD+A+ QL A A+A
Sbjct 74 VVAPSVDAKLSDGDTVVLRRAREIVLTVDG-ERRTVWSTALTVDDAMRQLNFAGDAYASA 132
Query 121 SRASRVPLSGMALPVVSAKTVQLNDGGLVRT-VHLPAPNVAGLLSAAGVPLLQSDHVVPA 179
SR R+PL G+ VV+AK V+++D G V + AP V LL VPL Q+D VVPA
Sbjct 133 SRGQRIPLDGIEFDVVNAKAVRISDNGAPHADVRVAAPTVGALLDVTNVPLEQADTVVPA 192
Query 180 ATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFA 239
P+ +G++I VTRNR + TE P+ RV+DP + + VE+PG PG + VT
Sbjct 193 PETPLTDGLEIVVTRNRTETRTETHPIQAPENRVDDPGLEQGKTTVENPGTPGERTVTVT 252
Query 240 VAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAI 299
V VNG ET R +++VVV AVVRVGTKP P V GS+WD++A CEA GNWAI
Sbjct 253 VTTVNGAETDRRELSSVVVREPAPAVVRVGTKPKPSAPAVASGSVWDSLAQCEATGNWAI 312
Query 300 NTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARA 359
+ GNG+YGG+QF Q TW A GG +YAP AD A+RE+QIAVAE + QGW AWP C+++
Sbjct 313 SNGNGFYGGLQFSQSTWAAYGGTQYAPTADRASREQQIAVAEKVQAAQGWSAWPSCSSKL 372
Query 360 GAR 362
G R
Sbjct 373 GLR 375
>gi|333921160|ref|YP_004494741.1| Resuscitation-promoting factor RpfB [Amycolicicoccus subflavus
DQS3-9A1]
gi|333483381|gb|AEF41941.1| Resuscitation-promoting factor RpfB [Amycolicicoccus subflavus
DQS3-9A1]
Length=372
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/362 (46%), Positives = 219/362 (61%), Gaps = 5/362 (1%)
Query 3 RLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDL 62
++V G +L+ + G A+A K VT+ VDG V+T + V + G + + D +
Sbjct 14 QIVAGGVLVAMIGGAGTAIAMHKDVTIEVDGETHSVSTFRGDVDGALSSAGLPLTEHDVV 73
Query 63 YPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPA-AAS 121
PAA V DTIVL+R++ L++ +DG + +++WTTA+TV+EALAQL + +AS
Sbjct 74 IPAANESVSHGDTIVLQRAKLLEVDIDG-EPREIWTTAATVEEALAQLDLAGRELGVSAS 132
Query 122 RASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAAT 181
R+ R+P GM L V S KTV++ DG V +L+ GVPL D V P A
Sbjct 133 RSERIPFDGMQLSVTSPKTVKITDGEEEAEFQTIGFTVEEVLAEMGVPLEGFDAVFPHAR 192
Query 182 APIVEGMQIQVTRNRI-KKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAV 240
+ EGM+I V R R+ ++V E LP N +EDP M VE GVPG + T+ V
Sbjct 193 TAVTEGMEITVERLRVAREVLEEEFLPENV--IEDPNMLEGETRVEVEGVPGIEKNTYVV 250
Query 241 AEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAIN 300
NG E+ R VA+ + A +V+R GTK P V +GS WDA+A CE+ GNWAIN
Sbjct 251 LHANGGESARTKVASDISQEAQASVIRKGTKQRPSAPAVSNGSTWDALAQCESTGNWAIN 310
Query 301 TGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAG 360
TGNGYYGG+QF Q TW A GG +YAPRADLATRE+QIA+AE TR QGWGAWP C+++ G
Sbjct 311 TGNGYYGGLQFSQSTWAAYGGTQYAPRADLATREQQIAIAEKTRASQGWGAWPACSSKLG 370
Query 361 AR 362
R
Sbjct 371 LR 372
>gi|317506075|ref|ZP_07963903.1| transglycosylase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
gi|316255647|gb|EFV14889.1| transglycosylase domain-containing protein [Segniliparus rugosus
ATCC BAA-974]
Length=399
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 162/368 (45%), Positives = 222/368 (61%), Gaps = 8/368 (2%)
Query 2 LRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDD 61
LR VGALLL + +G + +A TVT+ VDG+A + TT K V + + E G+ + + D
Sbjct 33 LRGAVGALLLAIGASGAFVLANRHTVTIDVDGSARQFTTTKGNVGEALAEAGYKLRNSDR 92
Query 62 LYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVW-----TTASTVDEALAQLAMTDT- 115
+ PA G Q+ D I L R+R L++ G D K V TT STV ALA+ +T T
Sbjct 93 VSPAFGSQIVDGQRITLARARILRVIALGPDGKPVSDRNLVTTQSTVTAALAEHDLTTTD 152
Query 116 APAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDH 175
A ++PL G+ + + S +T+ ++DGG+ V + V +L +AGV L D
Sbjct 153 GSVGAIGDEQIPLGGLVVKLRSPRTITVSDGGVSHQVRVVGGTVRQVLDSAGVRLGAQDF 212
Query 176 VVPAATAPIVEGMQ-IQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQ 234
P A I +G+Q + V R +K T P + ++D N S ++DPG G+Q
Sbjct 213 ATPGLDASI-DGVQALAVNRVEVKTETVTESYQPEDQLIKDESKNFSWSQLDDPGSEGSQ 271
Query 235 DVTFAVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAG 294
VT+++ VNG R P+ V+ V+ VG KPGTEVPPV+DG+ WDA+A CE+G
Sbjct 272 RVTYSIRYVNGQAVERTPLGRTVLEEGRARVMEVGAKPGTEVPPVLDGASWDALASCESG 331
Query 295 GNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPV 354
GNW IN+GNG+YGGVQFD GTW A+GG +YAPRADLATREEQIA+A T+ QGWGAWPV
Sbjct 332 GNWHINSGNGFYGGVQFDFGTWIAHGGQKYAPRADLATREEQIAIARTTQQAQGWGAWPV 391
Query 355 CAARAGAR 362
C+ +AG R
Sbjct 392 CSIKAGLR 399
>gi|296394636|ref|YP_003659520.1| transglycosylase [Segniliparus rotundus DSM 44985]
gi|296181783|gb|ADG98689.1| Transglycosylase domain protein [Segniliparus rotundus DSM 44985]
Length=395
Score = 277 bits (709), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/369 (44%), Positives = 213/369 (58%), Gaps = 10/369 (2%)
Query 2 LRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDD 61
LR V ALLL + G +A TVTL VDG A TT K V + E G+ V D
Sbjct 29 LRGAVAALLLTIGAGGVLVIAQRHTVTLDVDGAAQEFTTTKDNVAGALAEAGYQVRKSDQ 88
Query 62 LYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVW-----TTASTVDEALAQLAMTDT- 115
+ PA Q+ + I L R+R L++ G D K V TT TV ALA+ MT
Sbjct 89 VSPAPDAQIDEGQRITLARARILRVIALGPDGKPVSDRNLVTTEHTVTAALAEHDMTTAD 148
Query 116 APAAASRASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDH 175
A R+PL G+ + + +T+ L+DGG+ R V + V +L +AGV L D
Sbjct 149 GSVGAVGDQRIPLEGLVVRLREPRTITLSDGGVTRQVRVVGGTVRQVLDSAGVRLGAQDF 208
Query 176 VVPAATAPIVEGMQIQVTRNRIKKVTERL--PLPPNARRVEDPEMNMSREVVEDPGVPGT 233
P A +G+Q +T NR++ TE + P + ++D N S ++DPG G+
Sbjct 209 ADPGLDAS-ADGVQT-LTVNRVEMKTETVIEAYQPEDQLIQDESKNFSWSKLDDPGSEGS 266
Query 234 QDVTFAVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEA 293
Q VT+++ VNG R P+ ++ V+ VG KPGTEVPPV+DG WD++A CE+
Sbjct 267 QRVTYSIKYVNGQPVERTPLNRSILVEGKPRVMEVGAKPGTEVPPVLDGGAWDSLAACES 326
Query 294 GGNWAINTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWP 353
GGNW IN GNG+YGGVQFD GTW A+GGL+YAPRADLATREEQIA+A T+ QGWGAWP
Sbjct 327 GGNWHINNGNGFYGGVQFDYGTWIAHGGLKYAPRADLATREEQIAIARTTQSSQGWGAWP 386
Query 354 VCAARAGAR 362
VC+ +AG R
Sbjct 387 VCSVKAGLR 395
>gi|343925257|ref|ZP_08764784.1| resuscitation-promoting factor [Gordonia alkanivorans NBRC 16433]
gi|343764854|dbj|GAA11710.1| resuscitation-promoting factor [Gordonia alkanivorans NBRC 16433]
Length=375
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/361 (45%), Positives = 210/361 (59%), Gaps = 5/361 (1%)
Query 3 RLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDL 62
RL VGA+ +A G VA KTVT+ VDG +V+TM V ++E G + D D +
Sbjct 19 RLAVGAVCATVAAGGVMGVAMHKTVTIDVDGQTRQVSTMAMSVESLLESEGLAPADGDKV 78
Query 63 YPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASR 122
P+ + TI + R + L + ++G + + T ASTVD+ L + + A A
Sbjct 79 SPSLDSGFGEGQTIKVNRLKKLTLDIEGQ-RETIITNASTVDQLLEERGLEHAAEEADFG 137
Query 123 ASRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAATA 182
+ +P+ G + V K VQL DG + + A V LL A G PL D VVPAA
Sbjct 138 SDELPVDGGKIDVALPKPVQLVDGPAKKRPVVAAHTVEDLLKALGTPLGAEDKVVPAADT 197
Query 183 PIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVAE 242
+ ++I VTR + + VT P+ P + EDP + R+VVE G PG VT+ V +
Sbjct 198 EVTPDLKIIVTRIKTEDVTVTEPVAPPEIKKEDPTLVRDRKVVEKKGAPGEARVTYKVTK 257
Query 243 VNGVETGRLPVANVVVTPAHEAVVRVGTKPGT-EVPPVIDGSIWDAIAGCEAGGNWAINT 301
VNG R + + V++ A VR+GTKPG VPP GS+WDA+A CEA GNWAINT
Sbjct 258 VNGRVVKRDKLTSEVLSEPVAATVRIGTKPGAPYVPP---GSVWDALAQCEATGNWAINT 314
Query 302 GNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGA 361
GNG+YGGVQFDQ TWE GGL YAPRADLATREEQIA+A+ T+ QGWGAWP C ++ G
Sbjct 315 GNGFYGGVQFDQNTWERWGGLEYAPRADLATREEQIAIAKKTQAVQGWGAWPSCTSKLGL 374
Query 362 R 362
R
Sbjct 375 R 375
>gi|319950589|ref|ZP_08024497.1| hypothetical protein ES5_13428 [Dietzia cinnamea P4]
gi|319435728|gb|EFV90940.1| hypothetical protein ES5_13428 [Dietzia cinnamea P4]
Length=396
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/364 (44%), Positives = 208/364 (58%), Gaps = 4/364 (1%)
Query 1 MLRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRD 60
MLRL V +L L G A+ T TL VDG+ + + T S V +EE G+SVD+RD
Sbjct 35 MLRLSVAGMLTTLVVGGVAALDQRTTYTLEVDGSPVELVTFSSDVHAALEEAGYSVDERD 94
Query 61 DLYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAA 120
+ A ++ D DT+ L R+RP+ + +DG ++QVWTTA+TV + +A+
Sbjct 95 VVI-APDDRLGDGDTVTLLRARPVTLEVDGR-SEQVWTTATTVADLVAERGDIPPRSYVT 152
Query 121 SRA-SRVPLSGMALPVVSAKTVQLND-GGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVP 178
R + VPL G + VV+ + + L+D GG P V LS AG+ L D V P
Sbjct 153 PRIDTDVPLDGATVSVVTPRELLLSDHGGPATPFASPGDTVGEFLSRAGITLGPHDTVTP 212
Query 179 AATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTF 238
A AP G + +TR + T P + VEDPE V +PG PG ++V +
Sbjct 213 PADAPAEPGTAVTITRVAVATETAVEPYDAPEQTVEDPEAFEGDRTVTEPGTPGEREVHY 272
Query 239 AVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWA 298
V VNGVET R A V+T A AVVRVGTKP VP G +WD+IA CE+GG+WA
Sbjct 273 TVTRVNGVETQRERSAENVLTEARPAVVRVGTKPRPAVPESSRGGVWDSIAACESGGDWA 332
Query 299 INTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAAR 358
INTGNG+ GG+QF TW +GG +YAP A LATRE+QIA+AE + QGWGAWP C A+
Sbjct 333 INTGNGFSGGLQFHPQTWIGHGGGQYAPSAHLATREQQIAIAEKVQASQGWGAWPACTAK 392
Query 359 AGAR 362
G R
Sbjct 393 LGLR 396
>gi|340795013|ref|YP_004760476.1| resuscitation-promoting factor [Corynebacterium variabile DSM
44702]
gi|340534923|gb|AEK37403.1| resuscitation-promoting factor [Corynebacterium variabile DSM
44702]
Length=376
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 150/364 (42%), Positives = 202/364 (56%), Gaps = 8/364 (2%)
Query 2 LRLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDD 61
LR+ G +L L G K VTL V+G ++ +T++ V I+ G V D D
Sbjct 18 LRVATGGMLATLVVGGAVVATNHKDVTLDVNGKILKASTVRGDVESILSSEGVDVSDGDL 77
Query 62 LYPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAAS 121
+ P V D + +R +R + + +DG ++ V TT TV E L +L + A + +
Sbjct 78 VTPGLSESVSDGSHVTVRFARQVALVVDGQ-SRTVDTTKMTVSELLDELDID--ADSTTA 134
Query 122 RASRVPLSGMALPVVSAKTVQLNDGGLVRT---VHLPAPNVAGLLSAAGVPLLQSDHVVP 178
AS +PL GM L + S K LNDG T + + AP VA +L G PL + D V P
Sbjct 135 SASAIPLDGMELDITSPKIFTLNDGQPDETPARLTMSAPTVADVLEMRGAPLGKEDVVTP 194
Query 179 AATAPIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTF 238
+A P+ + M I VTR ++VTE + P + +EDP+M E V + G GT VT
Sbjct 195 SADTPVTDDMHIDVTRKTSEEVTEEQEIAPPEKVIEDPDMAKGEEEVIEEGTAGTARVTV 254
Query 239 AVAEVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWA 298
V +NGVET R + + PA E VVR GT G+ P V DGS+WD +A CEA G+W+
Sbjct 255 RVHTLNGVETNRDELKREEIKPATERVVRRGT--GSSAPSVSDGSVWDQLAQCEATGDWS 312
Query 299 INTGNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAAR 358
INTGNG+ GG+QF TW A GG YAP A +A+REEQIAVAE + QGWGAWP C +
Sbjct 313 INTGNGFSGGLQFTPSTWAAFGGTEYAPEAYMASREEQIAVAEKVQAAQGWGAWPACTSS 372
Query 359 AGAR 362
G R
Sbjct 373 MGMR 376
>gi|262201473|ref|YP_003272681.1| transglycosylase [Gordonia bronchialis DSM 43247]
gi|262084820|gb|ACY20788.1| Transglycosylase domain protein [Gordonia bronchialis DSM 43247]
Length=372
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 154/361 (43%), Positives = 204/361 (57%), Gaps = 5/361 (1%)
Query 3 RLVVGALLLVLAFAGGYAVAACKTVTLTVDGTAMRVTTMKSRVIDIVEENGFSVDDRDDL 62
R+ VGA+L +A G VA K VT+ VDG+ V+TM V ++ G D +
Sbjct 16 RVAVGAVLATVAAGGVMGVALHKNVTIDVDGSTRDVSTMALSVDALLSSQGIEPGDGAQV 75
Query 63 YPAAGVQVHDADTIVLRRSRPLQISLDGHDAKQVWTTASTVDEALAQLAMTDTAPAAASR 122
PA D I + R + L + +DG + V T A TVDE LA+ +T A
Sbjct 76 TPALDSSFGDGQKITIHRKKTLMLEIDGK-PEVVTTNAVTVDELLAERGLTHAADVTNFH 134
Query 123 A-SRVPLSGMALPVVSAKTVQLNDGGLVRTVHLPAPNVAGLLSAAGVPLLQSDHVVPAAT 181
+ +P+ G + + K V L DG + A V LL+A G PL +D V PA
Sbjct 135 PDAPMPVDGGVVDLALPKPVSLTDGTATLHPTVAAQTVRDLLAALGNPLAPTDKVEPAPE 194
Query 182 APIVEGMQIQVTRNRIKKVTERLPLPPNARRVEDPEMNMSREVVEDPGVPGTQDVTFAVA 241
P+ + M+I+VTR R + T + P + +DP + R VV +PG PG VT+ +
Sbjct 195 TPVSKDMKIKVTRIRTETSTVEEAVKPPEIKQKDPNLIRDRRVVVNPGKPGQARVTYNIT 254
Query 242 EVNGVETGRLPVANVVVTPAHEAVVRVGTKPGTEVPPVIDGSIWDAIAGCEAGGNWAINT 301
+NG R + +VV+T A A VR+GTKPG PV +WDA+A CEA GNWAIN+
Sbjct 255 TINGKVVKRDRMQSVVLTAAQPATVRIGTKPGAPFVPV---GVWDALAQCEATGNWAINS 311
Query 302 GNGYYGGVQFDQGTWEANGGLRYAPRADLATREEQIAVAEVTRLRQGWGAWPVCAARAGA 361
GNG+YGGVQFDQ TWE GGL YAPRADLATREEQIAVA+ T+ QGWGAWP C+++ G
Sbjct 312 GNGFYGGVQFDQNTWERWGGLEYAPRADLATREEQIAVAKKTQAAQGWGAWPSCSSKLGL 371
Query 362 R 362
R
Sbjct 372 R 372
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 679021516550
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40