BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1022 Length=243 Score E Sequences producing significant alignments: (Bits) Value gi|15840450|ref|NP_335487.1| hypothetical protein MT1050 [Mycoba... 485 2e-135 gi|289555195|ref|ZP_06444405.1| lipoprotein lpqU [Mycobacterium ... 484 6e-135 gi|15608162|ref|NP_215538.1| lipoprotein LpqU [Mycobacterium tub... 483 1e-134 gi|31792213|ref|NP_854706.1| putative lipoprotein LpqU [Mycobact... 479 1e-133 gi|323720522|gb|EGB29604.1| lipoprotein lpqU [Mycobacterium tube... 453 8e-126 gi|254550006|ref|ZP_05140453.1| hypothetical protein Mtube_06023... 414 8e-114 gi|183984434|ref|YP_001852725.1| lipoprotein LpqU [Mycobacterium... 393 1e-107 gi|118619714|ref|YP_908046.1| lipoprotein LpqU [Mycobacterium ul... 392 3e-107 gi|342861625|ref|ZP_08718271.1| LpqU [Mycobacterium colombiense ... 391 4e-107 gi|240169892|ref|ZP_04748551.1| lipoprotein LpqU [Mycobacterium ... 389 2e-106 gi|296169895|ref|ZP_06851507.1| LpqU family protein [Mycobacteri... 382 3e-104 gi|254819275|ref|ZP_05224276.1| LpqU [Mycobacterium intracellula... 382 3e-104 gi|41407087|ref|NP_959923.1| LpqU [Mycobacterium avium subsp. pa... 380 9e-104 gi|118465114|ref|YP_880411.1| LpqU protein [Mycobacterium avium ... 375 3e-102 gi|336461332|gb|EGO40203.1| transglycosylase family protein [Myc... 366 2e-99 gi|145222543|ref|YP_001133221.1| putative lipoprotein LpqU [Myco... 351 6e-95 gi|120405722|ref|YP_955551.1| putative lipoprotein LpqU [Mycobac... 334 6e-90 gi|118468062|ref|YP_889657.1| LpqU protein [Mycobacterium smegma... 332 4e-89 gi|315442990|ref|YP_004075869.1| membrane-bound lytic murein tra... 328 6e-88 gi|119855047|ref|YP_935652.1| putative lipoprotein LpqU [Mycobac... 324 7e-87 gi|120404679|ref|YP_954508.1| putative lipoprotein LpqU [Mycobac... 318 3e-85 gi|108801205|ref|YP_641402.1| putative lipoprotein LpqU [Mycobac... 318 4e-85 gi|333989627|ref|YP_004522241.1| hypothetical protein JDM601_098... 318 6e-85 gi|169628257|ref|YP_001701906.1| putative lipoprotein LpqU [Myco... 304 7e-81 gi|145225949|ref|YP_001136603.1| putative lipoprotein LpqU [Myco... 296 2e-78 gi|145223391|ref|YP_001134069.1| putative lipoprotein LpqU [Myco... 288 3e-76 gi|289749554|ref|ZP_06508932.1| lipoprotein lpqU [Mycobacterium ... 273 1e-71 gi|343926956|ref|ZP_08766446.1| hypothetical protein GOALK_075_0... 238 5e-61 gi|262201529|ref|YP_003272737.1| membrane-bound lytic murein tra... 238 8e-61 gi|326381749|ref|ZP_08203442.1| Membrane-bound lytic murein tran... 219 2e-55 gi|333921135|ref|YP_004494716.1| LpqU protein [Amycolicicoccus s... 211 7e-53 gi|296140874|ref|YP_003648117.1| hypothetical protein Tpau_3191 ... 209 3e-52 gi|226365249|ref|YP_002783032.1| hypothetical protein ROP_58400 ... 207 1e-51 gi|325676603|ref|ZP_08156281.1| LpqU family protein [Rhodococcus... 204 7e-51 gi|312138708|ref|YP_004006044.1| transglycosylase [Rhodococcus e... 204 8e-51 gi|145295127|ref|YP_001137948.1| hypothetical protein cgR_1070 [... 204 8e-51 gi|25027596|ref|NP_737650.1| hypothetical protein CE1040 [Coryne... 202 5e-50 gi|259507000|ref|ZP_05749900.1| LpqU family protein [Corynebacte... 201 1e-49 gi|21323740|dbj|BAB98366.1| Hypothetical protein [Corynebacteriu... 199 2e-49 gi|19552198|ref|NP_600200.1| hypothetical protein NCgl0934 [Cory... 199 3e-49 gi|344044397|gb|EGV40074.1| hypothetical protein CgS9114_09673 [... 199 4e-49 gi|237785159|ref|YP_002905864.1| hypothetical protein ckrop_0550... 198 6e-49 gi|226307771|ref|YP_002767731.1| hypothetical protein RER_42840 ... 195 6e-48 gi|54026834|ref|YP_121076.1| hypothetical protein nfa48600 [Noca... 193 2e-47 gi|229495015|ref|ZP_04388764.1| LpqU protein [Rhodococcus erythr... 191 6e-47 gi|227542467|ref|ZP_03972516.1| LpqU family protein [Corynebacte... 191 1e-46 gi|227487828|ref|ZP_03918144.1| LpqU-like protein [Corynebacteri... 190 1e-46 gi|334696494|gb|AEG81291.1| putative secreted protein [Corynebac... 189 2e-46 gi|334563668|ref|ZP_08516659.1| hypothetical protein CbovD2_0376... 189 2e-46 gi|300858131|ref|YP_003783114.1| hypothetical protein cpfrc_0071... 189 3e-46 >gi|15840450|ref|NP_335487.1| hypothetical protein MT1050 [Mycobacterium tuberculosis CDC1551] gi|254231313|ref|ZP_04924640.1| lipoprotein lpqU [Mycobacterium tuberculosis C] gi|13880622|gb|AAK45301.1| hypothetical protein MT1050 [Mycobacterium tuberculosis CDC1551] gi|124600372|gb|EAY59382.1| lipoprotein lpqU [Mycobacterium tuberculosis C] Length=269 Score = 485 bits (1249), Expect = 2e-135, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR Sbjct 27 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 86 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA Sbjct 87 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 146 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN Sbjct 147 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 206 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG Sbjct 207 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 266 Query 241 HPL 243 HPL Sbjct 267 HPL 269 >gi|289555195|ref|ZP_06444405.1| lipoprotein lpqU [Mycobacterium tuberculosis KZN 605] gi|289439827|gb|EFD22320.1| lipoprotein lpqU [Mycobacterium tuberculosis KZN 605] Length=256 Score = 484 bits (1245), Expect = 6e-135, Method: Compositional matrix adjust. Identities = 243/243 (100%), Positives = 243/243 (100%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR Sbjct 14 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 73 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA Sbjct 74 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 133 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN Sbjct 134 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 193 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG Sbjct 194 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 253 Query 241 HPL 243 HPL Sbjct 254 HPL 256 >gi|15608162|ref|NP_215538.1| lipoprotein LpqU [Mycobacterium tuberculosis H37Rv] gi|148660804|ref|YP_001282327.1| putative lipoprotein LpqU [Mycobacterium tuberculosis H37Ra] gi|148822231|ref|YP_001286985.1| lipoprotein lpqU [Mycobacterium tuberculosis F11] 48 more sequence titles Length=243 Score = 483 bits (1242), Expect = 1e-134, Method: Compositional matrix adjust. Identities = 242/243 (99%), Positives = 243/243 (100%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR Sbjct 1 MSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA Sbjct 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN Sbjct 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG Sbjct 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 Query 241 HPL 243 HPL Sbjct 241 HPL 243 >gi|31792213|ref|NP_854706.1| putative lipoprotein LpqU [Mycobacterium bovis AF2122/97] gi|121636951|ref|YP_977174.1| putative lipoprotein lpqU [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989423|ref|YP_002644110.1| putative lipoprotein [Mycobacterium bovis BCG str. Tokyo 172] 18 more sequence titles Length=243 Score = 479 bits (1234), Expect = 1e-133, Method: Compositional matrix adjust. Identities = 241/243 (99%), Positives = 242/243 (99%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRWLRAVAVIGATAMLLASSCTWQLSLFI DGVPPPPGDPVPPVDTHAGGRPADQLR Sbjct 1 MSPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTHAGGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA Sbjct 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN Sbjct 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG Sbjct 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 Query 241 HPL 243 HPL Sbjct 241 HPL 243 >gi|323720522|gb|EGB29604.1| lipoprotein lpqU [Mycobacterium tuberculosis CDC1551A] gi|339297664|gb|AEJ49774.1| lipoprotein lpqU [Mycobacterium tuberculosis CCDC5180] Length=226 Score = 453 bits (1166), Expect = 8e-126, Method: Compositional matrix adjust. Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%) Query 18 MLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIAL 77 MLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIAL Sbjct 1 MLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIAL 60 Query 78 EAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGT 137 EAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGT Sbjct 61 EAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGT 120 Query 138 GGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAA 197 GGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAA Sbjct 121 GGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAA 180 Query 198 GYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 GYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL Sbjct 181 GYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 226 >gi|254550006|ref|ZP_05140453.1| hypothetical protein Mtube_06023 [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] Length=208 Score = 414 bits (1063), Expect = 8e-114, Method: Compositional matrix adjust. Identities = 207/208 (99%), Positives = 208/208 (100%), Gaps = 0/208 (0%) Query 36 VPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCH 95 +PPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCH Sbjct 1 MPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCH 60 Query 96 LAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDA 155 LAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDA Sbjct 61 LAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDA 120 Query 156 AVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWIT 215 AVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWIT Sbjct 121 AVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWIT 180 Query 216 ALRAYNNSVIYARAVRDWATAYAAGHPL 243 ALRAYNNSVIYARAVRDWATAYAAGHPL Sbjct 181 ALRAYNNSVIYARAVRDWATAYAAGHPL 208 >gi|183984434|ref|YP_001852725.1| lipoprotein LpqU [Mycobacterium marinum M] gi|183177760|gb|ACC42870.1| conserved lipoprotein LpqU [Mycobacterium marinum M] Length=243 Score = 393 bits (1009), Expect = 1e-107, Method: Compositional matrix adjust. Identities = 214/243 (89%), Positives = 225/243 (93%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRWLRA AVIGATAMLLASSCTWQLSLFI +GVPPPPGDPVPPVDT+A GRPADQLR Sbjct 1 MSPRRWLRAAAVIGATAMLLASSCTWQLSLFIPEGVPPPPGDPVPPVDTYASGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAE+RA AL +PVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESH+GTYRGATIA Sbjct 61 EWAEQRAPALEMPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHNGTYRGATIA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDV PPIRGVRLDGTGGTLRIVD + LDGD VERAMGPMQFISETWRLYGV A N Sbjct 121 PNGDVRPPIRGVRLDGTGGTLRIVDSERANLDGDDGVERAMGPMQFISETWRLYGVDANN 180 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGI + DNIDDAALSAAGYLCWRGKDLAT RGWITALRAYNNS +YARAVRDWATAYAAG Sbjct 181 DGIVSPDNIDDAALSAAGYLCWRGKDLATARGWITALRAYNNSGVYARAVRDWATAYAAG 240 Query 241 HPL 243 HPL Sbjct 241 HPL 243 >gi|118619714|ref|YP_908046.1| lipoprotein LpqU [Mycobacterium ulcerans Agy99] gi|118571824|gb|ABL06575.1| conserved lipoprotein LpqU [Mycobacterium ulcerans Agy99] Length=243 Score = 392 bits (1006), Expect = 3e-107, Method: Compositional matrix adjust. Identities = 213/243 (88%), Positives = 224/243 (93%), Gaps = 0/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRWLRA AVIGATAMLLASSCTWQLSLFI +GVPPPPGDPVPPVDT+A GRPADQLR Sbjct 1 MSPRRWLRAAAVIGATAMLLASSCTWQLSLFIPEGVPPPPGDPVPPVDTYASGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAE+RA AL +PVIALEAY YAARVAEVENPKCH+AWTTLAGIG+VESH+GTYRGATIA Sbjct 61 EWAEQRAPALEMPVIALEAYTYAARVAEVENPKCHIAWTTLAGIGQVESHNGTYRGATIA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDV PPIRGVRLDGTGGTLRIVD + LDGD VERAMGPMQFISETWRLYGV A N Sbjct 121 PNGDVRPPIRGVRLDGTGGTLRIVDSERANLDGDDGVERAMGPMQFISETWRLYGVDANN 180 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGI + DNIDDAALSAAGYLCWRGKDLAT RGWITALRAYNNS +YARAVRDWATAYAAG Sbjct 181 DGIVSPDNIDDAALSAAGYLCWRGKDLATARGWITALRAYNNSGVYARAVRDWATAYAAG 240 Query 241 HPL 243 HPL Sbjct 241 HPL 243 >gi|342861625|ref|ZP_08718271.1| LpqU [Mycobacterium colombiense CECT 3035] gi|342130759|gb|EGT84055.1| LpqU [Mycobacterium colombiense CECT 3035] Length=242 Score = 391 bits (1005), Expect = 4e-107, Method: Compositional matrix adjust. Identities = 201/243 (83%), Positives = 217/243 (90%), Gaps = 1/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRW+RA AVIGATA++LASSCTWQLSLFI DGVPPP GDPVP VDTHA GRPADQLR Sbjct 1 MSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPAVDTHASGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 +WA +R+A L IPVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGA +A Sbjct 61 DWAVQRSAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDG+GGTLRIVD + + D V RAMGPMQFI ETWRLYGV A N Sbjct 121 PNGDVSPPIRGVRLDGSGGTLRIVDTE-EDVTDDDGVTRAMGPMQFIPETWRLYGVDAHN 179 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DG + DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYA G Sbjct 180 DGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAKG 239 Query 241 HPL 243 HPL Sbjct 240 HPL 242 >gi|240169892|ref|ZP_04748551.1| lipoprotein LpqU [Mycobacterium kansasii ATCC 12478] Length=246 Score = 389 bits (999), Expect = 2e-106, Method: Compositional matrix adjust. Identities = 214/246 (87%), Positives = 229/246 (94%), Gaps = 3/246 (1%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 ++PRRWLRAVAVIGATAMLLASSCTWQLSLFI DGVPPPPGDPVPPVDT+A GRPADQLR Sbjct 1 MTPRRWLRAVAVIGATAMLLASSCTWQLSLFIPDGVPPPPGDPVPPVDTYASGRPADQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 EWAE+RA AL +PVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESH+GTYRGATIA Sbjct 61 EWAEQRAPALEMPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHNGTYRGATIA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDA---AVERAMGPMQFISETWRLYGVA 177 PNGDV+PPIRGVRLDGTGGTLRIVD D G +DG + V+RAMGPMQFI+ETWRLYGV Sbjct 121 PNGDVTPPIRGVRLDGTGGTLRIVDSDRGTVDGASDGDGVQRAMGPMQFIAETWRLYGVD 180 Query 178 ARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAY 237 A NDGI + DNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAY Sbjct 181 ANNDGIVSPDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAY 240 Query 238 AAGHPL 243 AAGHPL Sbjct 241 AAGHPL 246 >gi|296169895|ref|ZP_06851507.1| LpqU family protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895451|gb|EFG75153.1| LpqU family protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=243 Score = 382 bits (981), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 207/243 (86%), Positives = 218/243 (90%), Gaps = 1/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 VSPRRWLRA AVIGATAMLLASSCTWQLSLFI +GVPPP G PVPPVDTHA GRPADQLR Sbjct 2 VSPRRWLRAAAVIGATAMLLASSCTWQLSLFIPEGVPPPAGAPVPPVDTHASGRPADQLR 61 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 WAE+R+A L IPVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGA +A Sbjct 62 AWAEQRSATLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLA 121 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDG+GGTLRIVD + D D V RAMGPMQFI ETWRLYGV A N Sbjct 122 PNGDVSPPIRGVRLDGSGGTLRIVDSEEQVTDDDGVV-RAMGPMQFIPETWRLYGVDAHN 180 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DG + DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYAAG Sbjct 181 DGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAAG 240 Query 241 HPL 243 HPL Sbjct 241 HPL 243 >gi|254819275|ref|ZP_05224276.1| LpqU [Mycobacterium intracellulare ATCC 13950] Length=242 Score = 382 bits (980), Expect = 3e-104, Method: Compositional matrix adjust. Identities = 205/243 (85%), Positives = 221/243 (91%), Gaps = 1/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRW+RA AVIGATA++LASSCTWQLSLFI DGVPPP GDPVPPVDTHA GRPA+QLR Sbjct 1 MSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPAEQLR 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 +WA+ R+AAL IP+IALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGAT+A Sbjct 61 DWAQPRSAALEIPLIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGATLA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDG+GGTLRIVD D DGD V RAMGPMQFI ETWRLYGV A N Sbjct 121 PNGDVSPPIRGVRLDGSGGTLRIVDTDEDLTDGD-GVTRAMGPMQFIPETWRLYGVDAHN 179 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DG + DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYA G Sbjct 180 DGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAKG 239 Query 241 HPL 243 HPL Sbjct 240 HPL 242 >gi|41407087|ref|NP_959923.1| LpqU [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395438|gb|AAS03306.1| LpqU [Mycobacterium avium subsp. paratuberculosis K-10] Length=264 Score = 380 bits (976), Expect = 9e-104, Method: Compositional matrix adjust. Identities = 205/243 (85%), Positives = 217/243 (90%), Gaps = 1/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 VSPRRW+RA AVIGATA++LASSCTWQLSLFI DGVPPP GDPVPPVDTHA GRPADQLR Sbjct 23 VSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQLR 82 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 +WA +RAA L IPVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGA +A Sbjct 83 DWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLA 142 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDG+GGTLRIVD D D D V RAMGPMQFI ETWRLY V A N Sbjct 143 PNGDVSPPIRGVRLDGSGGTLRIVDNDEDVTDED-GVTRAMGPMQFIPETWRLYAVDAHN 201 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DG + DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYA G Sbjct 202 DGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAKG 261 Query 241 HPL 243 HPL Sbjct 262 HPL 264 >gi|118465114|ref|YP_880411.1| LpqU protein [Mycobacterium avium 104] gi|254774023|ref|ZP_05215539.1| LpqU [Mycobacterium avium subsp. avium ATCC 25291] gi|118166401|gb|ABK67298.1| LpqU protein [Mycobacterium avium 104] Length=242 Score = 375 bits (964), Expect = 3e-102, Method: Compositional matrix adjust. Identities = 203/243 (84%), Positives = 216/243 (89%), Gaps = 1/243 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLR 60 +SPRRW+RA AVIGATA++LASSCTWQLSLFI DGVPPP GDPVPPVDTHA GRPADQL Sbjct 1 MSPRRWMRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQLH 60 Query 61 EWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIA 120 +WA +RAA L IPVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGA +A Sbjct 61 DWAAQRAAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLA 120 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 PNGDVSPPIRGVRLDG+GGTLRIVD D D D V RAMGPMQFI ETWRLY V A N Sbjct 121 PNGDVSPPIRGVRLDGSGGTLRIVDNDEDVTDED-GVTRAMGPMQFIPETWRLYAVDAHN 179 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DG + DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYA G Sbjct 180 DGRVSPDNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAKG 239 Query 241 HPL 243 HPL Sbjct 240 HPL 242 >gi|336461332|gb|EGO40203.1| transglycosylase family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=236 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 199/237 (84%), Positives = 211/237 (90%), Gaps = 1/237 (0%) Query 7 LRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +RA AVIGATA++LASSCTWQLSLFI DGVPPP GDPVPPVDTHA GRPADQLR+WA +R Sbjct 1 MRAAAVIGATAIVLASSCTWQLSLFIPDGVPPPAGDPVPPVDTHASGRPADQLRDWAAQR 60 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVS 126 AA L IPVIALEAYAYAARVAEVENPKCH+AWTTLAGIG+VESHHGTYRGA +APNGDVS Sbjct 61 AAGLEIPVIALEAYAYAARVAEVENPKCHIAWTTLAGIGQVESHHGTYRGARLAPNGDVS 120 Query 127 PPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANV 186 PPIRGVRLDG+GGTLRIVD D D D V RAMGPMQFI ETWRLY V A NDG + Sbjct 121 PPIRGVRLDGSGGTLRIVDNDEDVTDED-GVTRAMGPMQFIPETWRLYAVDAHNDGRVSP 179 Query 187 DNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 DNIDDAAL+AAGYLCWRGKDLATPRGWITALRAYNNS +YARAVRDWATAYA GHPL Sbjct 180 DNIDDAALAAAGYLCWRGKDLATPRGWITALRAYNNSGVYARAVRDWATAYAKGHPL 236 >gi|145222543|ref|YP_001133221.1| putative lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] gi|145215029|gb|ABP44433.1| putative conserved lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] Length=249 Score = 351 bits (900), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 177/245 (73%), Positives = 199/245 (82%), Gaps = 6/245 (2%) Query 5 RWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAE 64 RWL+A+AVIGATA+L+ASSC+WQ+ + + DGVPPP GD VP +DT+A GRPADQL +WA Sbjct 5 RWLQAMAVIGATALLMASSCSWQMGIRVPDGVPPPAGDAVPQIDTYAKGRPADQLHDWAA 64 Query 65 KRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGD 124 +RA AL IPV ALEAYAYAARVAEVENP C+L WTTLAGIG+VESHHGTYRGATIA +G+ Sbjct 65 ERAPALRIPVTALEAYAYAARVAEVENPDCNLKWTTLAGIGQVESHHGTYRGATIARDGE 124 Query 125 VSPPIRGVRLDGTGGTLRIVDRDGGGLD------GDAAVERAMGPMQFISETWRLYGVAA 178 V+PPIRGV LDGT G L I+D D D GD RAMGPMQFI ETWRLYGV A Sbjct 125 VTPPIRGVLLDGTNGNLEILDGDAVSHDPAVEAKGDEPFARAMGPMQFIPETWRLYGVDA 184 Query 179 RNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYA 238 NDG +VDNIDDAALSAAGYLCWRGKDL+ PRGW+ ALRAYN S YAR VRD+ATAYA Sbjct 185 NNDGDVSVDNIDDAALSAAGYLCWRGKDLSKPRGWMEALRAYNYSDAYARNVRDYATAYA 244 Query 239 AGHPL 243 GHPL Sbjct 245 QGHPL 249 >gi|120405722|ref|YP_955551.1| putative lipoprotein LpqU [Mycobacterium vanbaalenii PYR-1] gi|119958540|gb|ABM15545.1| putative conserved lipoprotein LpqU [Mycobacterium vanbaalenii PYR-1] Length=249 Score = 334 bits (857), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 178/245 (73%), Positives = 201/245 (83%), Gaps = 6/245 (2%) Query 5 RWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAE 64 RWL+A+AVIGATA+L+ASSC+WQ+ + + DGVPPPPGD VP +DT+A GRPADQL EWA Sbjct 5 RWLQAIAVIGATALLMASSCSWQIGIPVPDGVPPPPGDAVPQIDTYAKGRPADQLHEWAA 64 Query 65 KRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGD 124 +RA ALGIPV ALEAYAYAARVAEVENP C+L WTTLAGIG+VESHHGTYRG+T+A +G+ Sbjct 65 ERAPALGIPVTALEAYAYAARVAEVENPDCNLKWTTLAGIGQVESHHGTYRGSTVAADGE 124 Query 125 VSPPIRGVRLDGTGGTLRIVDRDGGGLD------GDAAVERAMGPMQFISETWRLYGVAA 178 V+PPIRGV LDGT G L I+D D D GD RAMGPMQFI ETWRLYGV A Sbjct 125 VTPPIRGVLLDGTAGNLVILDDDSVSHDPAIENKGDEPFARAMGPMQFIPETWRLYGVDA 184 Query 179 RNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYA 238 NDG + DNIDDAALSAAGYLCWRGKDL+ PRGW+ ALRAYN+S YAR VRDWATAYA Sbjct 185 NNDGDVSADNIDDAALSAAGYLCWRGKDLSKPRGWMEALRAYNHSDQYARTVRDWATAYA 244 Query 239 AGHPL 243 GHPL Sbjct 245 QGHPL 249 >gi|118468062|ref|YP_889657.1| LpqU protein [Mycobacterium smegmatis str. MC2 155] gi|118169349|gb|ABK70245.1| LpqU protein [Mycobacterium smegmatis str. MC2 155] Length=224 Score = 332 bits (850), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 167/224 (75%), Positives = 181/224 (81%), Gaps = 0/224 (0%) Query 20 LASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEA 79 +ASSC+WQL I +GVPPP GDPVP +DT+A GRPAD LREWA +RA ALGIPV ALEA Sbjct 1 MASSCSWQLGTPIPEGVPPPAGDPVPAIDTYAKGRPADALREWAAERAPALGIPVKALEA 60 Query 80 YAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGG 139 YAYAARVAEVENP C+L WTTLAGIG VESHHGTYRGA I N DVSPPIRGV LDGT G Sbjct 61 YAYAARVAEVENPNCNLKWTTLAGIGMVESHHGTYRGAMITQNSDVSPPIRGVLLDGTAG 120 Query 140 TLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGY 199 +RI D DGG LDGD ++RAMGPMQFI ETW +GV A NDG + DN DDAALSAAG Sbjct 121 NMRIADTDGGLLDGDDELDRAMGPMQFIPETWGHFGVDANNDGKVDPDNFDDAALSAAGV 180 Query 200 LCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 LCW GKDL+ PRGW+ ALRAYN S YARAVRDWATAYAAGH L Sbjct 181 LCWYGKDLSDPRGWMRALRAYNYSDQYARAVRDWATAYAAGHAL 224 >gi|315442990|ref|YP_004075869.1| membrane-bound lytic murein transglycosylase B [Mycobacterium sp. Spyr1] gi|315261293|gb|ADT98034.1| membrane-bound lytic murein transglycosylase B [Mycobacterium sp. Spyr1] Length=249 Score = 328 bits (840), Expect = 6e-88, Method: Compositional matrix adjust. Identities = 179/245 (74%), Positives = 198/245 (81%), Gaps = 6/245 (2%) Query 5 RWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAE 64 RWL+A+AVIGATA+L+ASSC+WQ+ + + DGVPPPPGD VP +DT+A GRPADQL +WA Sbjct 5 RWLQAMAVIGATALLMASSCSWQIGIRVPDGVPPPPGDAVPQIDTYAEGRPADQLHDWAA 64 Query 65 KRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGD 124 RA AL IPV ALEAYAYAARVAEVENP C+L WTTLAGIG+VESHHGTYRGATIA +G Sbjct 65 ARAPALRIPVTALEAYAYAARVAEVENPDCNLKWTTLAGIGQVESHHGTYRGATIARDGR 124 Query 125 VSPPIRGVRLDGTGGTLRIVDRDGGGLD------GDAAVERAMGPMQFISETWRLYGVAA 178 V+PPIRGV LDGT G L I+D D D GD RAMGPMQFI ETWRLYGV A Sbjct 125 VTPPIRGVLLDGTNGNLEILDGDAVSHDPAVEQKGDEPFARAMGPMQFIPETWRLYGVDA 184 Query 179 RNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYA 238 NDG +VDNIDDAALSAAGYLCWRGKDL+ PRGW+ ALRAYN S YAR VRDWATAYA Sbjct 185 NNDGDVDVDNIDDAALSAAGYLCWRGKDLSKPRGWMEALRAYNYSDAYARNVRDWATAYA 244 Query 239 AGHPL 243 GHPL Sbjct 245 QGHPL 249 >gi|119855047|ref|YP_935652.1| putative lipoprotein LpqU [Mycobacterium sp. KMS] gi|145225997|ref|YP_001136651.1| putative lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] gi|119697765|gb|ABL94837.1| putative conserved lipoprotein LpqU [Mycobacterium sp. KMS] gi|145218460|gb|ABP47863.1| putative conserved lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] Length=242 Score = 324 bits (831), Expect = 7e-87, Method: Compositional matrix adjust. Identities = 160/228 (71%), Positives = 184/228 (81%), Gaps = 0/228 (0%) Query 16 TAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVI 75 TAML+ASSC+ Q+ + +G+PPP G PVP +D A GRPADQLR WA +RA AL +P Sbjct 15 TAMLVASSCSCQIGTSMPEGIPPPSGAPVPYIDYPARGRPADQLRVWAAQRAPALNMPAT 74 Query 76 ALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLD 135 ALEAYAYAARVA VENP C LAWTTLAGIG VES +GT+RGATIAPNGDV+PPIRGVRLD Sbjct 75 ALEAYAYAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLD 134 Query 136 GTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALS 195 G+ G +RI+D GG DG+ +AMGPMQFI ETWRLYGV A NDG+ + DN+DDAALS Sbjct 135 GSNGNMRIIDNGGGSPDGEPGFAQAMGPMQFIPETWRLYGVDANNDGVVSPDNVDDAALS 194 Query 196 AAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 AAGYLC RG DLATP+GW+ ALRAYN S YAR+VRDWATAYA+GH L Sbjct 195 AAGYLCNRGGDLATPQGWMKALRAYNQSDPYARSVRDWATAYASGHSL 242 >gi|120404679|ref|YP_954508.1| putative lipoprotein LpqU [Mycobacterium vanbaalenii PYR-1] gi|119957497|gb|ABM14502.1| putative conserved lipoprotein LpqU [Mycobacterium vanbaalenii PYR-1] Length=242 Score = 318 bits (816), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 163/237 (69%), Positives = 189/237 (80%), Gaps = 0/237 (0%) Query 7 LRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +R VAV+GATA+L+ SSC+ Q+ + +G+PPP G PVP +D A GRPADQLR WA +R Sbjct 6 VRTVAVVGATAVLMTSSCSCQIGTSMPEGIPPPAGAPVPYIDYPARGRPADQLRIWAAQR 65 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVS 126 A AL +P ALEAYAYAARVA VENP C LAWTTLAGIG VES +GT+RGATIAPNGDV+ Sbjct 66 APALNMPTTALEAYAYAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVT 125 Query 127 PPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANV 186 PPIRGVRLDG+ G +RI+D GG G+ +AMGPMQFI ETWRLYGV A NDGI + Sbjct 126 PPIRGVRLDGSNGNMRIIDSGGGTPPGEPGFAQAMGPMQFIPETWRLYGVDANNDGIVSP 185 Query 187 DNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 DN+DDAALSAAGYLC RG DLATP+GW+ AL AYN S Y+R+VRDWATAYAAGH L Sbjct 186 DNVDDAALSAAGYLCNRGGDLATPKGWMKALWAYNQSDPYSRSVRDWATAYAAGHSL 242 >gi|108801205|ref|YP_641402.1| putative lipoprotein LpqU [Mycobacterium sp. MCS] gi|119870356|ref|YP_940308.1| putative lipoprotein LpqU [Mycobacterium sp. KMS] gi|126437185|ref|YP_001072876.1| putative lipoprotein LpqU [Mycobacterium sp. JLS] gi|108771624|gb|ABG10346.1| putative conserved lipoprotein LpqU [Mycobacterium sp. MCS] gi|119696445|gb|ABL93518.1| putative conserved lipoprotein LpqU [Mycobacterium sp. KMS] gi|126236985|gb|ABO00386.1| putative conserved lipoprotein LpqU [Mycobacterium sp. JLS] Length=252 Score = 318 bits (816), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 172/239 (72%), Positives = 194/239 (82%), Gaps = 0/239 (0%) Query 5 RWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAE 64 RW+ AV+ AT ++LASSC+WQ+ + I +GVPPPPGDPVP VDT+A GRPAD LREWA Sbjct 14 RWMTVAAVVVATILVLASSCSWQMGIPIPEGVPPPPGDPVPAVDTYADGRPADALREWAA 73 Query 65 KRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGD 124 +RA LGIPV ALEAYAYAARVAEVENP CHL WTTLAGIG VESHHG YRGA +A NG+ Sbjct 74 ERAPQLGIPVTALEAYAYAARVAEVENPDCHLTWTTLAGIGMVESHHGNYRGAMVAANGE 133 Query 125 VSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIA 184 V+PPIRG+RLDG+ G L IVD D G LDGD ++RAMGPMQFI ETWRLYGV A DG + Sbjct 134 VTPPIRGMRLDGSSGNLEIVDTDSGLLDGDDELDRAMGPMQFIPETWRLYGVDANGDGKS 193 Query 185 NVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 + DNIDDAALSAAGYLC+ GKDL+TPRGW+ LRAYN S YAR VRDWATAYA G L Sbjct 194 DPDNIDDAALSAAGYLCYTGKDLSTPRGWMNGLRAYNYSEQYARTVRDWATAYADGRRL 252 >gi|333989627|ref|YP_004522241.1| hypothetical protein JDM601_0987 [Mycobacterium sp. JDM601] gi|333485595|gb|AEF34987.1| lipoprotein LpqU [Mycobacterium sp. JDM601] Length=244 Score = 318 bits (814), Expect = 6e-85, Method: Compositional matrix adjust. Identities = 181/244 (75%), Positives = 197/244 (81%), Gaps = 1/244 (0%) Query 1 VSPRRWLRAVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTH-AGGRPADQL 59 +S RRWLR AV+GATA+LLASSC+WQL I GVPPPPGDPVPPV+T GRPADQL Sbjct 1 MSARRWLRTTAVVGATAVLLASSCSWQLGNPIPQGVPPPPGDPVPPVNTQLVAGRPADQL 60 Query 60 REWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATI 119 WA +RAA L IPV ALEAYAYAARVAEVENP CHL+WTTLA IG++ESHHG Y AT+ Sbjct 61 YHWAAERAAVLDIPVTALEAYAYAARVAEVENPNCHLSWTTLAAIGQIESHHGRYNHATV 120 Query 120 APNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAAR 179 A NGDV P IRGVRLDG+GGTL IV+ L D V RAMGPMQFI ETWRLYGV A Sbjct 121 ARNGDVRPKIRGVRLDGSGGTLHIVESLQPDLADDDGVVRAMGPMQFIPETWRLYGVDAN 180 Query 180 NDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAA 239 NDGI + DNIDDAALSAAGYLCWRGKDLAT +GW+TAL AYN+S IYARAVRDWA AYAA Sbjct 181 NDGIISPDNIDDAALSAAGYLCWRGKDLATAKGWMTALLAYNDSEIYARAVRDWAAAYAA 240 Query 240 GHPL 243 G PL Sbjct 241 GRPL 244 >gi|169628257|ref|YP_001701906.1| putative lipoprotein LpqU [Mycobacterium abscessus ATCC 19977] gi|169240224|emb|CAM61252.1| Putative conserved lipoprotein LpqU [Mycobacterium abscessus] Length=255 Score = 304 bits (778), Expect = 7e-81, Method: Compositional matrix adjust. Identities = 160/246 (66%), Positives = 181/246 (74%), Gaps = 5/246 (2%) Query 3 PRRWLRAVAVIGATAMLLASSCTWQLS--LFITDGVPPPPGDPVPPVDT---HAGGRPAD 57 P R+ R + V+ + LLA+ C+WQL + GVPPP GDPVP + T H GRPAD Sbjct 10 PARFGRIMLVVSISVFLLAAGCSWQLGGRNPLPQGVPPPAGDPVPDIATPPAHIQGRPAD 69 Query 58 QLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGA 117 QLREW+ RA GIPVIALEAYAYAA+VAE ENP+C +AWTTLAGIG VESH+GTY GA Sbjct 70 QLREWSTPRAEKTGIPVIALEAYAYAAKVAERENPRCKIAWTTLAGIGTVESHNGTYHGA 129 Query 118 TIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVA 177 + PNGD PPIRGVRLDG+ G LR+ D D G LDGDA +RAMGPMQFI ETWR+YGV Sbjct 130 ELQPNGDALPPIRGVRLDGSNGNLRLPDTDKGVLDGDANQDRAMGPMQFIPETWRIYGVR 189 Query 178 ARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAY 237 A DG + DNIDDAALSAAGYLC RG DL+T GWI AL AYN S +YA VRDWATAY Sbjct 190 AAGDGEPSPDNIDDAALSAAGYLCSRGGDLSTTDGWIKALWAYNMSDVYAEQVRDWATAY 249 Query 238 AAGHPL 243 A G L Sbjct 250 AKGATL 255 >gi|145225949|ref|YP_001136603.1| putative lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] gi|145218412|gb|ABP47815.1| putative conserved lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] Length=212 Score = 296 bits (757), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 152/212 (72%), Positives = 171/212 (81%), Gaps = 0/212 (0%) Query 32 ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVEN 91 + +G+PPP G PVP +D A GRPADQLR WA +RA AL +P ALEAYAYAARVA VEN Sbjct 1 MPEGIPPPAGAPVPYIDYPARGRPADQLRIWAARRAPALNMPTTALEAYAYAARVAHVEN 60 Query 92 PKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGL 151 P C LAWTTLAGIG VES +GT+RGATIAPNGDV+PPIRGVRLDG+ G +RI+D GG Sbjct 61 PDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLDGSNGNMRIIDSGGGTP 120 Query 152 DGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPR 211 G+ +AMGPMQFI ETWRLYGV A NDGI + DN+DDAALSAAGYLC RG DLATP+ Sbjct 121 PGEPGFAQAMGPMQFIPETWRLYGVDANNDGIVSPDNVDDAALSAAGYLCNRGGDLATPK 180 Query 212 GWITALRAYNNSVIYARAVRDWATAYAAGHPL 243 GW+ ALRAYN S YAR+VRDWATAYAAGH L Sbjct 181 GWMKALRAYNQSDPYARSVRDWATAYAAGHSL 212 >gi|145223391|ref|YP_001134069.1| putative lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] gi|145215877|gb|ABP45281.1| putative conserved lipoprotein LpqU [Mycobacterium gilvum PYR-GCK] Length=242 Score = 288 bits (738), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 159/222 (72%), Positives = 176/222 (80%), Gaps = 0/222 (0%) Query 19 LLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALE 78 L+ SSC+ Q I +GVPPP G PVP +D A GRPADQLR WA +RA AL IP ALE Sbjct 18 LMTSSCSCQTGTSIPEGVPPPAGAPVPYIDYPARGRPADQLRVWAAQRAPALNIPATALE 77 Query 79 AYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTG 138 AYAYAARVA VENP C LAWTTLAGIG VES +GT+RGATIAPNGDV+PPIRGVRLDG+ Sbjct 78 AYAYAARVAHVENPDCQLAWTTLAGIGMVESRNGTFRGATIAPNGDVTPPIRGVRLDGSN 137 Query 139 GTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAG 198 G +RI D GG DG+ +AMGPMQFI ETWRLYGV A NDGI + DN+DDAALSAAG Sbjct 138 GNMRITDSGGGSPDGEPGFAQAMGPMQFIPETWRLYGVDANNDGIVSPDNVDDAALSAAG 197 Query 199 YLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 YLC RG DLATP+GW+TAL AYN S YAR+VRDWATAYAAG Sbjct 198 YLCNRGGDLATPKGWMTALWAYNQSDPYARSVRDWATAYAAG 239 >gi|289749554|ref|ZP_06508932.1| lipoprotein lpqU [Mycobacterium tuberculosis T92] gi|289690141|gb|EFD57570.1| lipoprotein lpqU [Mycobacterium tuberculosis T92] Length=137 Score = 273 bits (699), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 136/137 (99%), Positives = 137/137 (100%), Gaps = 0/137 (0%) Query 107 VESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF 166 +ESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF Sbjct 1 MESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF 60 Query 167 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY 226 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY Sbjct 61 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY 120 Query 227 ARAVRDWATAYAAGHPL 243 ARAVRDWATAYAAGHPL Sbjct 121 ARAVRDWATAYAAGHPL 137 >gi|343926956|ref|ZP_08766446.1| hypothetical protein GOALK_075_00020 [Gordonia alkanivorans NBRC 16433] gi|343763115|dbj|GAA13372.1| hypothetical protein GOALK_075_00020 [Gordonia alkanivorans NBRC 16433] Length=256 Score = 238 bits (607), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 129/242 (54%), Positives = 162/242 (67%), Gaps = 7/242 (2%) Query 4 RRWLRAVAVIGATAM---LLASSCTWQLSLF---ITDGVPPPPGDPVPPVDTHAGGRPAD 57 RR R V G A+ +L S+C SL I +G+PP G P P +D +A GR AD Sbjct 10 RRSWRNGLVAGGVAIASTVLLSACIDLPSLNRPDIPEGIPPGAGVPQPYIDINAPGRTAD 69 Query 58 QLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGA 117 ++REWAE + + GIP+++L+AY AA + ++P+C +AWTTLAGI VES HG YRG+ Sbjct 70 KMREWAEPISESTGIPIVSLQAYGNAAEIQRQQHPECGIAWTTLAGIAGVESKHGRYRGS 129 Query 118 TIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVA 177 ++A NGDVSPPIRGV+LDGT G + I D DGG LDGD +RAMGP QFI ETW+ YGV Sbjct 130 SVAANGDVSPPIRGVQLDGTKGNMEIRDTDGGRLDGDPTHDRAMGPFQFIPETWKRYGVD 189 Query 178 ARNDGIANVDNIDDAALSAAGYLC-WRGKDLATPRGWITALRAYNNSVIYARAVRDWATA 236 A DG+ + DNIDDAALSAA YLC G D+ GW A+R YNNS+ Y VRD A A Sbjct 190 ASGDGVPDPDNIDDAALSAARYLCVSSGNDMTVAEGWEKAVRTYNNSMAYVLDVRDHANA 249 Query 237 YA 238 Y+ Sbjct 250 YS 251 >gi|262201529|ref|YP_003272737.1| membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] gi|262084876|gb|ACY20844.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia bronchialis DSM 43247] Length=252 Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 133/245 (55%), Positives = 157/245 (65%), Gaps = 7/245 (2%) Query 1 VSPRRWLRAVAVIG--ATAMLLASSCTWQLSLF----ITDGVPPPPGDPVPPVDTHAGGR 54 V R W R V G A AM + S L F I DG+PP G P P +D +A GR Sbjct 3 VRSRGWRRRAGVTGLAAVAMSVVVSGCVDLPSFDRPDIPDGIPPGAGTPQPYIDINAPGR 62 Query 55 PADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTY 114 A+ +R WA A + GIP++ALEAY AA + ++P+C LAWTTLAGI VES HGT+ Sbjct 63 TAELMRGWATPIAKSTGIPLVALEAYGNAAEIQRQQHPECGLAWTTLAGIAGVESKHGTH 122 Query 115 RGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLY 174 G +A NGD SPPIRGV LDGT G +RI D DGG LDGD+ +RAMGP QFI ETW Y Sbjct 123 HGTRLAANGDTSPPIRGVSLDGTRGNMRIHDTDGGALDGDSTHDRAMGPFQFIPETWTRY 182 Query 175 GVAARNDGIANVDNIDDAALSAAGYLC-WRGKDLATPRGWITALRAYNNSVIYARAVRDW 233 GV A DG A+ DNIDDAALSAA YLC G D+ TP GW A++ YNNS+ Y VRD Sbjct 183 GVDANGDGKADPDNIDDAALSAARYLCVSSGGDMTTPNGWEKAVKVYNNSMAYVLDVRDH 242 Query 234 ATAYA 238 A AY+ Sbjct 243 ANAYS 247 >gi|326381749|ref|ZP_08203442.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] gi|326199175|gb|EGD56356.1| Membrane-bound lytic murein transglycosylase B- like protein [Gordonia neofelifaecis NRRL B-59395] Length=250 Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 123/241 (52%), Positives = 154/241 (64%), Gaps = 6/241 (2%) Query 2 SPRRWLRAVAVIGATAMLLASSCTWQLSLF---ITDGVPPPPGDPVPPVDTHAGGRPADQ 58 S RRW VA I A+L SSC ++ I DG+PP G P +D ++ GR A++ Sbjct 7 SRRRWW--VAPILLAAVLALSSCGVRMPWDRPDIPDGLPPGVGTQQPYIDINSPGRTAEK 64 Query 59 LREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGAT 118 +R+WA + A IP+ ALEAY AA + ++P+C + WTTLAGI VE+ HG + GA+ Sbjct 65 MRDWATPISEATAIPLTALEAYGNAAEIQRQQHPECGIGWTTLAGIAAVETKHGRHGGAS 124 Query 119 IAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAA 178 +APNGDV P IRG LDGT G I D D G LDGD +RAMGP QFI ETW YGV A Sbjct 125 VAPNGDVRPKIRGPELDGTNGNRVIRDTDKGKLDGDTEYDRAMGPFQFIPETWMRYGVDA 184 Query 179 RNDGIANVDNIDDAALSAAGYLC-WRGKDLATPRGWITALRAYNNSVIYARAVRDWATAY 237 DG+A+ DNIDDAALSAA YLC + G D+ TP GW A+ AYNN Y VR++A AY Sbjct 185 NGDGVADPDNIDDAALSAARYLCVYSGGDMTTPEGWEKAVHAYNNHDEYVLKVRNYANAY 244 Query 238 A 238 + Sbjct 245 S 245 >gi|333921135|ref|YP_004494716.1| LpqU protein [Amycolicicoccus subflavus DQS3-9A1] gi|333483356|gb|AEF41916.1| LpqU protein [Amycolicicoccus subflavus DQS3-9A1] Length=452 Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 112/208 (54%), Positives = 137/208 (66%), Gaps = 0/208 (0%) Query 32 ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVEN 91 + + +PP PG VP +D HA GR +D L +WA+ + ALGIP A++AY +AA V + Sbjct 26 VLEAMPPAPGTGVPMIDYHAPGRTSDLLADWAQAHSDALGIPRPAMQAYGHAALVMQETQ 85 Query 92 PKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGL 151 P C L WTTLAGIG +ES HGTY GATI +G V PPIRGV+LDG G I D D G + Sbjct 86 PGCGLRWTTLAGIGGIESWHGTYEGATILDDGRVEPPIRGVKLDGRPGLADIPDTDNGEM 145 Query 152 DGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPR 211 DGD +RAMGPMQFI ETWRL+G +G A+ DNIDDA +SAA YLC G +L +P Sbjct 146 DGDPDHDRAMGPMQFIPETWRLFGTDGNGNGHADPDNIDDAVMSAARYLCAAGGNLESPE 205 Query 212 GWITALRAYNNSVIYARAVRDWATAYAA 239 GW A+ AYN S Y VRD A Y+A Sbjct 206 GWRKAILAYNQSEDYLLDVRDAAWRYSA 233 >gi|296140874|ref|YP_003648117.1| hypothetical protein Tpau_3191 [Tsukamurella paurometabola DSM 20162] gi|296029008|gb|ADG79778.1| conserved hypothetical protein [Tsukamurella paurometabola DSM 20162] Length=241 Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 114/221 (52%), Positives = 138/221 (63%), Gaps = 0/221 (0%) Query 18 MLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGIPVIAL 77 M LAS + I DG+PP PG PVP ++ + GR A+ LR+WA + A GIP I+L Sbjct 16 MTLASCGAIGQRIDIPDGIPPGPGAPVPYINVNGPGRTAELLRDWATPISVATGIPRISL 75 Query 78 EAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDVSPPIRGVRLDGT 137 EAY AA P+C +AWTTLAGI +ES HGT+RGAT+AP+G VSPPIRGV LDGT Sbjct 76 EAYGNAAEAMRQRTPECGIAWTTLAGIAFIESKHGTFRGATVAPDGKVSPPIRGVPLDGT 135 Query 138 GGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVDNIDDAALSAA 197 G I+ +A + AMGP QFI ETW+ +GV A DG + DNIDDAAL+AA Sbjct 136 NGNQEILATGTDPHRPNAKYDAAMGPFQFIPETWKRFGVDANGDGRPDPDNIDDAALTAA 195 Query 198 GYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYA 238 YLC G DL T RGW + YN S Y VRD A AY+ Sbjct 196 RYLCVSGGDLTTARGWEKGVMVYNQSRKYLVDVRDAAAAYS 236 >gi|226365249|ref|YP_002783032.1| hypothetical protein ROP_58400 [Rhodococcus opacus B4] gi|226243739|dbj|BAH54087.1| hypothetical protein [Rhodococcus opacus B4] Length=256 Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 120/235 (52%), Positives = 155/235 (66%), Gaps = 4/235 (1%) Query 10 VAVIGATAMLL----ASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEK 65 A++ AT +++ A S Q + I +G+PP PG PP+D +A GR ADQL EW+ Sbjct 19 FALLAATVVVVLAYGACSREQQPRVAIPEGIPPGPGAATPPIDINAPGRSADQLHEWSAG 78 Query 66 RAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGATIAPNGDV 125 A ++G+ ALEAY YA+ V P C + WTTLAGI VES HGT+ G+T+ P G+V Sbjct 79 LADSIGVGNTALEAYGYASAVMAETKPGCGIGWTTLAGIASVESRHGTHAGSTVGPTGEV 138 Query 126 SPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIAN 185 +P IRG+ LDG G I D DGG +DGD +RAMGP+QFI ETW+ +GV A DG+A+ Sbjct 139 APEIRGIPLDGGPGVAEIPDTDGGAMDGDPVHDRAMGPLQFIPETWKRWGVDANGDGVAD 198 Query 186 VDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DNIDD+AL+AA YLC RG DL +P GW +AL AYN S Y VRD A+AY+ G Sbjct 199 ADNIDDSALTAARYLCERGGDLTSPDGWQSALMAYNLSGEYLTLVRDRASAYSVG 253 >gi|325676603|ref|ZP_08156281.1| LpqU family protein [Rhodococcus equi ATCC 33707] gi|325552781|gb|EGD22465.1| LpqU family protein [Rhodococcus equi ATCC 33707] Length=286 Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust. Identities = 110/194 (57%), Positives = 128/194 (66%), Gaps = 0/194 (0%) Query 47 VDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGR 106 +D + GR A L EWA + AL I ALEAY YAA V P C + WTTLAGI Sbjct 90 IDINGPGRTAAGLGEWAAPLSDALAISPTALEAYGYAAAVMAATKPDCGIGWTTLAGIAA 149 Query 107 VESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF 166 VES HGTYRG+++ +G VSPPIRG+ LDG+ G I D DGG +DGDA +RAMGP+QF Sbjct 150 VESKHGTYRGSSVGEDGQVSPPIRGIPLDGSPGVAEIPDTDGGAMDGDATHDRAMGPLQF 209 Query 167 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY 226 I ETW +GV A DG+ + DNIDDAAL+AA YLC RG DL T GW AL AYN S Y Sbjct 210 IPETWARWGVDANGDGVVDPDNIDDAALTAARYLCARGGDLTTADGWTAALMAYNLSGEY 269 Query 227 ARAVRDWATAYAAG 240 R VRD A AY+ G Sbjct 270 LRDVRDRAAAYSVG 283 >gi|312138708|ref|YP_004006044.1| transglycosylase [Rhodococcus equi 103S] gi|311888047|emb|CBH47359.1| putative transglycosylase [Rhodococcus equi 103S] Length=285 Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 110/194 (57%), Positives = 128/194 (66%), Gaps = 0/194 (0%) Query 47 VDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGR 106 +D + GR A L EWA + AL I ALEAY YAA V P C + WTTLAGI Sbjct 89 IDINGPGRTAAGLGEWAAPLSDALAISPTALEAYGYAAAVMAATKPDCGIGWTTLAGIAA 148 Query 107 VESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF 166 VES HGTYRG+++ +G VSPPIRG+ LDG+ G I D DGG +DGDA +RAMGP+QF Sbjct 149 VESKHGTYRGSSVGEDGQVSPPIRGIPLDGSPGVAEIPDTDGGAMDGDATHDRAMGPLQF 208 Query 167 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY 226 I ETW +GV A DG+ + DNIDDAAL+AA YLC RG DL T GW AL AYN S Y Sbjct 209 IPETWARWGVDANGDGVVDPDNIDDAALTAARYLCARGGDLTTADGWTAALMAYNLSGEY 268 Query 227 ARAVRDWATAYAAG 240 R VRD A AY+ G Sbjct 269 LRDVRDRAAAYSVG 282 >gi|145295127|ref|YP_001137948.1| hypothetical protein cgR_1070 [Corynebacterium glutamicum R] gi|140845047|dbj|BAF54046.1| hypothetical protein [Corynebacterium glutamicum R] Length=254 Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust. Identities = 114/241 (48%), Positives = 143/241 (60%), Gaps = 16/241 (6%) Query 18 MLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +++ S W LS I + VPP G VP +DT AGGR +D LR WAE Sbjct 12 IMVISFVGWALSFMDGTAPIRQLQQIPEDVPPARGVEVPQIDTEAGGRTSDHLRFWAEPI 71 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAP 121 A +G+ A+ AY A +A P C+L W TLAGIG+VE+ HGTY G +++ Sbjct 72 AQDIGVSAQAIAAYGNAELIASTAWPGCNLGWNTLAGIGQVETRHGTYNGKMFGGSSLDE 131 Query 122 NGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARND 181 NG +PPI GV LDG+ G I D DGG LDGD +RA+GPMQFI ETWRL G+ A D Sbjct 132 NGVATPPIIGVPLDGSPGFAEIPDTDGGELDGDTEYDRAVGPMQFIPETWRLMGLDANGD 191 Query 182 GIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH 241 G+A+ + IDDAALSAA LC +DL+TP GW A+ +YN S Y VRD A +YA Sbjct 192 GVADPNQIDDAALSAANLLCSNDRDLSTPEGWTAAVHSYNMSNQYLMDVRDAAASYALRQ 251 Query 242 P 242 P Sbjct 252 P 252 >gi|25027596|ref|NP_737650.1| hypothetical protein CE1040 [Corynebacterium efficiens YS-314] gi|23492878|dbj|BAC17850.1| conserved hypothetical protein [Corynebacterium efficiens YS-314] Length=295 Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 115/242 (48%), Positives = 142/242 (59%), Gaps = 16/242 (6%) Query 18 MLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +++ S W LS I D VPP G+PVP +D HA GR +D LR WA+ Sbjct 53 IMVISFVGWALSFMDGAAPIRQLQPIPDNVPPAAGEPVPSIDIHAEGRTSDHLRYWADPI 112 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAP 121 AA G+ A+ AY AA +A P+C +AWTTLAGIG VE+ HGTY G +++ Sbjct 113 AADTGVSSQAIAAYGNAALIAAEAWPECGIAWTTLAGIGYVETRHGTYNGKMFGGSSLDE 172 Query 122 NGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARND 181 NG +PPI G+ LDG+ G RI D D G DGD +RA+GPMQFI E+W+ YG A D Sbjct 173 NGVATPPIIGIALDGSPGVARIQDTDDGKYDGDTEYDRAVGPMQFIPESWKRYGRDANGD 232 Query 182 GIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH 241 G A+ IDDAALSAA LC G +L T GW TAL AYN S Y VRD A +YA Sbjct 233 GYADPHQIDDAALSAAHLLCKTGGNLTTAEGWTTALYAYNRSTEYLINVRDAAASYALRQ 292 Query 242 PL 243 P+ Sbjct 293 PV 294 >gi|259507000|ref|ZP_05749900.1| LpqU family protein [Corynebacterium efficiens YS-314] gi|259165452|gb|EEW50006.1| LpqU family protein [Corynebacterium efficiens YS-314] Length=242 Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 115/241 (48%), Positives = 141/241 (59%), Gaps = 16/241 (6%) Query 19 LLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRA 67 ++ S W LS I D VPP G+PVP +D HA GR +D LR WA+ A Sbjct 1 MVISFVGWALSFMDGAAPIRQLQPIPDNVPPAAGEPVPSIDIHAEGRTSDHLRYWADPIA 60 Query 68 AALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAPN 122 A G+ A+ AY AA +A P+C +AWTTLAGIG VE+ HGTY G +++ N Sbjct 61 ADTGVSSQAIAAYGNAALIAAEAWPECGIAWTTLAGIGYVETRHGTYNGKMFGGSSLDEN 120 Query 123 GDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDG 182 G +PPI G+ LDG+ G RI D D G DGD +RA+GPMQFI E+W+ YG A DG Sbjct 121 GVATPPIIGIALDGSPGVARIQDTDDGKYDGDTEYDRAVGPMQFIPESWKRYGRDANGDG 180 Query 183 IANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHP 242 A+ IDDAALSAA LC G +L T GW TAL AYN S Y VRD A +YA P Sbjct 181 YADPHQIDDAALSAAHLLCKTGGNLTTAEGWTTALYAYNRSTEYLINVRDAAASYALRQP 240 Query 243 L 243 + Sbjct 241 V 241 >gi|21323740|dbj|BAB98366.1| Hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=262 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 112/241 (47%), Positives = 141/241 (59%), Gaps = 16/241 (6%) Query 18 MLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +++ S W LS I + VPP G VP +DT A GR ++ LR WAE Sbjct 20 IMVISFVGWALSFMDGTAPIRQLQQIPEDVPPARGVEVPQIDTEADGRTSNHLRFWAEPI 79 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAP 121 A G+ A+ AY A +A P C+L W TLAGIG+VE+ HGTY G +++ Sbjct 80 AQDTGVSAQAIAAYGNAELIASTAWPGCNLGWNTLAGIGQVETRHGTYNGKMFGGSSLDE 139 Query 122 NGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARND 181 NG +PPI GV LDG+ G I D DGG LDGD +RA+GPMQFI ETWRL G+ A D Sbjct 140 NGVATPPIIGVPLDGSPGFAEIPDTDGGELDGDTEYDRAVGPMQFIPETWRLMGLDANGD 199 Query 182 GIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH 241 G+A+ + IDDAALSAA LC +DL+TP GW A+ +YN S Y VRD A +YA Sbjct 200 GVADPNQIDDAALSAANLLCSNDRDLSTPEGWTAAVHSYNMSNQYLMDVRDAAASYALRQ 259 Query 242 P 242 P Sbjct 260 P 260 >gi|19552198|ref|NP_600200.1| hypothetical protein NCgl0934 [Corynebacterium glutamicum ATCC 13032] gi|62389864|ref|YP_225266.1| hypothetical protein cg1110 [Corynebacterium glutamicum ATCC 13032] gi|41325199|emb|CAF19680.1| conserved hypothetical protein [Corynebacterium glutamicum ATCC 13032] Length=254 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 112/241 (47%), Positives = 141/241 (59%), Gaps = 16/241 (6%) Query 18 MLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +++ S W LS I + VPP G VP +DT A GR ++ LR WAE Sbjct 12 IMVISFVGWALSFMDGTAPIRQLQQIPEDVPPARGVEVPQIDTEADGRTSNHLRFWAEPI 71 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAP 121 A G+ A+ AY A +A P C+L W TLAGIG+VE+ HGTY G +++ Sbjct 72 AQDTGVSAQAIAAYGNAELIASTAWPGCNLGWNTLAGIGQVETRHGTYNGKMFGGSSLDE 131 Query 122 NGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARND 181 NG +PPI GV LDG+ G I D DGG LDGD +RA+GPMQFI ETWRL G+ A D Sbjct 132 NGVATPPIIGVPLDGSPGFAEIPDTDGGELDGDTEYDRAVGPMQFIPETWRLMGLDANGD 191 Query 182 GIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH 241 G+A+ + IDDAALSAA LC +DL+TP GW A+ +YN S Y VRD A +YA Sbjct 192 GVADPNQIDDAALSAANLLCSNDRDLSTPEGWTAAVHSYNMSNQYLMDVRDAAASYALRQ 251 Query 242 P 242 P Sbjct 252 P 252 >gi|344044397|gb|EGV40074.1| hypothetical protein CgS9114_09673 [Corynebacterium glutamicum S9114] Length=254 Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 112/241 (47%), Positives = 140/241 (59%), Gaps = 16/241 (6%) Query 18 MLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKR 66 +++ S W LS I + VPP G VP +DT A GR +D LR WAE Sbjct 12 IMVISFVGWALSFMDGTAPIRQLQQIPEDVPPARGVEVPQIDTEADGRTSDHLRFWAEPI 71 Query 67 AAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAP 121 A G+ A+ AY A +A P C+L W TLAGIG+VE+ HGTY G +++ Sbjct 72 AQDTGVSAQAIAAYGNAELIASTAWPGCNLGWNTLAGIGQVETRHGTYNGKMFGGSSLDE 131 Query 122 NGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARND 181 NG +PPI GV LDG+ G I D DGG LDGD +RA+GPMQFI ETWRL G+ A D Sbjct 132 NGVATPPIIGVPLDGSPGFAEIPDTDGGELDGDTEYDRAVGPMQFIPETWRLMGLDANGD 191 Query 182 GIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGH 241 G+A+ + IDDAAL AA LC +DL+TP GW A+ +YN S Y VRD A +YA Sbjct 192 GVADPNQIDDAALGAANLLCSNDRDLSTPEGWTAAVHSYNMSNQYLMDVRDAAASYALRQ 251 Query 242 P 242 P Sbjct 252 P 252 >gi|237785159|ref|YP_002905864.1| hypothetical protein ckrop_0550 [Corynebacterium kroppenstedtii DSM 44385] gi|237758071|gb|ACR17321.1| putative secreted protein [Corynebacterium kroppenstedtii DSM 44385] Length=256 Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 113/246 (46%), Positives = 140/246 (57%), Gaps = 15/246 (6%) Query 8 RAVAVIGATAMLLASSCTWQLSLFITDG----------VPPPPGDPVPPVDTHAGGRPAD 57 R + + A L+ + W +S TD VPPP G P VDT R ++ Sbjct 5 RTLIAVFAVLALVIVTIGWLVSHVHTDSSSMRKPIPSDVPPPNGVAAPAVDTSKHTRTSE 64 Query 58 QLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG- 116 + R WAE + GI V AL AYA A VA P CHL WTTLAG+G VE+ HGTY G Sbjct 65 EFRTWAEPISKKTGISVEALSAYANANVVARHSKPGCHLGWTTLAGLGWVETRHGTYNGH 124 Query 117 ----ATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWR 172 +I NGDV P IRGV+LDG G + D D G LDGD +RAMGP+QFI ++W Sbjct 125 HFDSVSIDSNGDVKPHIRGVQLDGAPGLENLPDTDNGELDGDKEKDRAMGPLQFIPQSWE 184 Query 173 LYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRD 232 YGV A DG A+ DNIDDAA++A LC +DL+T GW +A+R+YNNS Y VR Sbjct 185 KYGVDANADGKADPDNIDDAAVAAVNLLCDFDRDLSTADGWKSAVRSYNNSAQYVEDVRR 244 Query 233 WATAYA 238 A Y+ Sbjct 245 AAANYS 250 >gi|226307771|ref|YP_002767731.1| hypothetical protein RER_42840 [Rhodococcus erythropolis PR4] gi|226186888|dbj|BAH34992.1| conserved hypothetical protein [Rhodococcus erythropolis PR4] Length=270 Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 126/243 (52%), Positives = 152/243 (63%), Gaps = 4/243 (1%) Query 2 SPRRWLRAVAVIGATAMLLAS---SC-TWQLSLFITDGVPPPPGDPVPPVDTHAGGRPAD 57 SPRR R VA + A LL + +C + + + I +G+PP G P PP+D +A GR AD Sbjct 24 SPRRLSRVVAAVAAGTALLGAGIVACGSNEPKVAIPEGIPPGTGSPTPPIDINAPGRSAD 83 Query 58 QLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGA 117 QL +WA + +GI ALEAY YAA V P C + WTTLAGIG VES HGTY G+ Sbjct 84 QLADWAAGLSDDIGIGTTALEAYGYAAAVMAETLPSCGIGWTTLAGIGSVESRHGTYDGS 143 Query 118 TIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVA 177 ++ G V+P IRG+ LDG G I D DGG +DGD +RAMGPMQFI ETW +GV Sbjct 144 SVDAFGQVAPAIRGIPLDGGPGVAEIPDTDGGAMDGDPVHDRAMGPMQFIPETWLKWGVD 203 Query 178 ARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAY 237 A DG + DNIDDAAL+AA YLC RG DL GW AL AYN S Y VRD A+AY Sbjct 204 ANGDGRVDPDNIDDAALTAARYLCARGGDLTAAAGWQQALMAYNLSGDYLALVRDRASAY 263 Query 238 AAG 240 + G Sbjct 264 SVG 266 >gi|54026834|ref|YP_121076.1| hypothetical protein nfa48600 [Nocardia farcinica IFM 10152] gi|54018342|dbj|BAD59712.1| hypothetical protein [Nocardia farcinica IFM 10152] Length=240 Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 104/194 (54%), Positives = 125/194 (65%), Gaps = 0/194 (0%) Query 47 VDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGR 106 +D A GR A QLR+WAE + LGIP +ALEAY YAA V P C +AWTTLAGI Sbjct 44 IDVDAPGRAALQLRDWAETQFGTLGIPTVALEAYGYAAAVMARSRPGCGIAWTTLAGIAS 103 Query 107 VESHHGTYRGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQF 166 VES HGT+R + + +G V PPI GV LDG+ G I D DGG LDGD +RA+GP+QF Sbjct 104 VESKHGTHRESDLHADGVVRPPIIGVALDGSPGVAVIRDTDGGALDGDPEHDRAVGPLQF 163 Query 167 ISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIY 226 I ETW+ +GV A DG+ + +IDDAAL+AA YLC G DL + GW AL YN S Y Sbjct 164 IPETWQRWGVDANGDGVLDPQSIDDAALTAARYLCASGGDLTSREGWQQALLTYNQSTSY 223 Query 227 ARAVRDWATAYAAG 240 VR A AY+ G Sbjct 224 LHTVRHRAAAYSVG 237 >gi|229495015|ref|ZP_04388764.1| LpqU protein [Rhodococcus erythropolis SK121] gi|229318109|gb|EEN83981.1| LpqU protein [Rhodococcus erythropolis SK121] Length=270 Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 123/246 (50%), Positives = 150/246 (61%), Gaps = 10/246 (4%) Query 2 SPRRWLR-------AVAVIGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGR 54 SPRR R A++GA + S+ + + I +G+PP G P PP+D +A GR Sbjct 24 SPRRLSRAVAAVAAGTALLGAGVVACGSN---EPKVAIPEGIPPGTGSPTPPIDINAPGR 80 Query 55 PADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTY 114 ADQL +WA + +GI ALEAY YAA V C + WTTLAGIG VES HGTY Sbjct 81 SADQLADWAAGLSDDIGIGTTALEAYGYAAAVMAETLTGCGIGWTTLAGIGSVESRHGTY 140 Query 115 RGATIAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLY 174 G+++ G V+P IRG+ LDG G I D DGG +DGD +RAMGPMQFI ETW + Sbjct 141 DGSSVDAFGQVAPIIRGIPLDGGPGVAEIPDTDGGAMDGDPVHDRAMGPMQFIPETWLKW 200 Query 175 GVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWA 234 GV A DG + DNIDDAAL+AA YLC RG DL + GW AL AYN S Y VRD A Sbjct 201 GVDANGDGRVDPDNIDDAALTAARYLCARGGDLTSAAGWQQALMAYNLSGDYLALVRDRA 260 Query 235 TAYAAG 240 +AY+ G Sbjct 261 SAYSVG 266 >gi|227542467|ref|ZP_03972516.1| LpqU family protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181665|gb|EEI62637.1| LpqU family protein [Corynebacterium glucuronolyticum ATCC 51866] Length=289 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/235 (48%), Positives = 137/235 (59%), Gaps = 5/235 (2%) Query 13 IGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGI 72 +G L+ Q L I D VPP +P P +DT+A GR +D+L WA+ A LG Sbjct 44 VGLLVQLMGVPVPLQPRLPIPDDVPPAAAEPAPKIDTNAPGRTSDKLGFWADPLAKDLGF 103 Query 73 PVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAPNGDVSP 127 AL AY A +A P CHL+W TLAGIG VE+ HGTY G A I NG V P Sbjct 104 SSAALRAYGNAEIIANESYPDCHLSWNTLAGIGFVETRHGTYTGRIFDGAAIDENGFVQP 163 Query 128 PIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVD 187 I G +LDG G + D D G +DGDA ++RA+GP+QFI ETWR + A DG+ N Sbjct 164 AIFGPQLDGNSGFALVKDTDNGEMDGDAELDRAVGPLQFIPETWRRFSRDADGDGVPNPQ 223 Query 188 NIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHP 242 IDDAAL+ A LC G DL+TP GW A+R+YN S Y +VRD A +YA G P Sbjct 224 QIDDAALTTAVMLCTNGGDLSTPEGWTKAVRSYNQSTEYVMSVRDAAASYALGQP 278 >gi|227487828|ref|ZP_03918144.1| LpqU-like protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227092155|gb|EEI27467.1| LpqU-like protein [Corynebacterium glucuronolyticum ATCC 51867] Length=289 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/235 (48%), Positives = 137/235 (59%), Gaps = 5/235 (2%) Query 13 IGATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEKRAAALGI 72 +G L+ Q L I D VPP +P P +DT+A GR +D+L WA+ A LG Sbjct 44 VGLLVQLMGVPVPLQPRLPIPDDVPPAAAEPAPKIDTNAPGRTSDKLGFWADPLAKDLGF 103 Query 73 PVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRG-----ATIAPNGDVSP 127 AL AY A +A P CHL+W TLAGIG VE+ HGTY G A I NG V P Sbjct 104 SSAALRAYGNAEIIANESYPDCHLSWNTLAGIGFVETRHGTYTGRIFDGAAIDENGFVQP 163 Query 128 PIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARNDGIANVD 187 I G +LDG G + D D G +DGDA ++RA+GP+QFI ETWR + A DG+ N Sbjct 164 AIFGPQLDGNSGFALVKDTDNGEMDGDAELDRAVGPLQFIPETWRRFSRDADGDGVPNPQ 223 Query 188 NIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAGHP 242 IDDAAL+ A LC G DL+TP GW A+R+YN S Y +VRD A +YA G P Sbjct 224 QIDDAALTTAVMLCANGGDLSTPEGWTKAVRSYNQSTEYVMSVRDAAASYALGQP 278 >gi|334696494|gb|AEG81291.1| putative secreted protein [Corynebacterium ulcerans 809] Length=249 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 113/243 (47%), Positives = 140/243 (58%), Gaps = 17/243 (6%) Query 16 TAMLLASSCTWQLSLF-----------ITDGVPPPPGDPVPPVDTHAGGRPADQLREWAE 64 + +L+ S W LS + VPP VP +D HA GR +D+L WA+ Sbjct 6 SVILVISLVGWALSFLEGESPVRQLQDVPTSVPPARAAEVPRIDIHAPGRTSDKLAFWAD 65 Query 65 KRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGA-----TI 119 AA I A+ AYA A +A P+CHL+W TLAG+G VE+ HGTY G I Sbjct 66 PIAADTSISSAAIRAYANAELIAAESWPECHLSWGTLAGLGYVETRHGTYSGHLFESREI 125 Query 120 APNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAAR 179 NG V PPI GV LDG+ G ++ D D G LDGD +RA+GPMQFI ETW+ YG A Sbjct 126 DSNGFVLPPIIGVPLDGSPGFAKVPDTDNGRLDGDTVYDRAVGPMQFIPETWKKYGRDAN 185 Query 180 NDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAA 239 DG+A+ + IDDAALSAA LC G+DLAT GW +AL AYN S Y VR+ A +YA Sbjct 186 GDGVADPNQIDDAALSAANMLC-DGRDLATKEGWTSALHAYNMSNDYLIKVRNAAASYAL 244 Query 240 GHP 242 P Sbjct 245 RQP 247 >gi|334563668|ref|ZP_08516659.1| hypothetical protein CbovD2_03764 [Corynebacterium bovis DSM 20582] Length=274 Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 103/201 (52%), Positives = 126/201 (63%), Gaps = 5/201 (2%) Query 47 VDTHAGGRPADQLREWAEKRAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGR 106 +D HA GR A QLR+WAE ++ GIPV AL AY A +A P+CHL W TLAG+G Sbjct 72 IDVHAPGRTALQLRDWAEGQSELTGIPVEALMAYGNADVIARGSRPQCHLQWNTLAGLGY 131 Query 107 VESHHGTYRGAT-----IAPNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAM 161 VE+ HGTY G T + +G V PPI G LDG+ G I D DGG LDGD +RA+ Sbjct 132 VETRHGTYDGVTFGAAELGDDGVVRPPIVGPALDGSAGFAEIRDTDGGRLDGDPEYDRAV 191 Query 162 GPMQFISETWRLYGVAARNDGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYN 221 GP+QFI E+W YG+ A D +A+ NI+DAA SA LC G+DLATP GW A+ +YN Sbjct 192 GPLQFIPESWARYGIDASGDDVADPQNIEDAAASAVRLLCADGRDLATPEGWTDAVASYN 251 Query 222 NSVIYARAVRDWATAYAAGHP 242 S +Y VRD A YA G P Sbjct 252 RSGVYIGDVRDAAAHYAVGQP 272 >gi|300858131|ref|YP_003783114.1| hypothetical protein cpfrc_00713 [Corynebacterium pseudotuberculosis FRC41] gi|300685585|gb|ADK28507.1| putative secreted protein [Corynebacterium pseudotuberculosis FRC41] Length=249 Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 114/242 (48%), Positives = 143/242 (60%), Gaps = 8/242 (3%) Query 7 LRAVAVIG-ATAMLLASSCTWQLSLFITDGVPPPPGDPVPPVDTHAGGRPADQLREWAEK 65 + ++++G A + L S QL T VPP VP +D HA GR +D+L WA+ Sbjct 8 ILVISLVGWAISFLDGESPVRQLQEVPT-SVPPARAAEVPRIDIHAPGRTSDKLAFWADP 66 Query 66 RAAALGIPVIALEAYAYAARVAEVENPKCHLAWTTLAGIGRVESHHGTYRGA-----TIA 120 AA I A+ AY A +A P CHL+W TLAG+G VE+ HGTY G I Sbjct 67 IAADTSISSAAIRAYGNAELIAAESWPSCHLSWGTLAGLGYVETRHGTYSGHLFESREID 126 Query 121 PNGDVSPPIRGVRLDGTGGTLRIVDRDGGGLDGDAAVERAMGPMQFISETWRLYGVAARN 180 NG V PPI GV LDG+ G +++D D G LDGD +RA+GPMQFI ETW+ YG A Sbjct 127 SNGFVLPPIIGVPLDGSSGLAKVLDTDNGVLDGDTVYDRAVGPMQFIPETWKKYGRDANG 186 Query 181 DGIANVDNIDDAALSAAGYLCWRGKDLATPRGWITALRAYNNSVIYARAVRDWATAYAAG 240 DGIA+ + IDDAAL+AA LC G+DLAT GW +AL AYN S Y VR+ A +YA Sbjct 187 DGIADPNQIDDAALTAANMLC-DGRDLATKEGWTSALHAYNMSNDYLVKVRNAAASYALR 245 Query 241 HP 242 P Sbjct 246 QP 247 Lambda K H 0.319 0.136 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 336904708980 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40