BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1027c
Length=226
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608167|ref|NP_215543.1| transcriptional regulatory protein ... 454 5e-126
gi|167968526|ref|ZP_02550803.1| transcriptional regulatory prote... 452 1e-125
gi|289757111|ref|ZP_06516489.1| transcriptional regulatory prote... 452 2e-125
gi|296169900|ref|ZP_06851512.1| KDP operon response regulator Kd... 428 3e-118
gi|41407093|ref|NP_959929.1| KdpE [Mycobacterium avium subsp. pa... 424 6e-117
gi|254820274|ref|ZP_05225275.1| KDP operon transcriptional regul... 419 2e-115
gi|240169880|ref|ZP_04748539.1| KDP operon transcriptional regul... 397 7e-109
gi|342861631|ref|ZP_08718277.1| KDP operon transcriptional regul... 397 7e-109
gi|336461326|gb|EGO40197.1| response regulator with CheY-like re... 393 1e-107
gi|120405713|ref|YP_955542.1| two component transcriptional regu... 385 3e-105
gi|333989633|ref|YP_004522247.1| transcriptional regulator [Myco... 370 7e-101
gi|118472637|ref|YP_889637.1| KDP operon transcriptional regulat... 366 1e-99
gi|226307209|ref|YP_002767169.1| turgor pressure transcriptional... 363 1e-98
gi|108801194|ref|YP_641391.1| two component transcriptional regu... 362 2e-98
gi|229493212|ref|ZP_04387004.1| KDP operon transcriptional regul... 362 2e-98
gi|317506419|ref|ZP_07964224.1| response regulator receiver doma... 358 3e-97
gi|169630331|ref|YP_001703980.1| transcriptional regulatory prot... 357 7e-97
gi|312140452|ref|YP_004007788.1| two component system response r... 348 5e-94
gi|183980660|ref|YP_001848951.1| transcriptional regulatory prot... 347 6e-94
gi|296393295|ref|YP_003658179.1| transcriptional regulator [Segn... 345 2e-93
gi|111018238|ref|YP_701210.1| response regulator, two-component ... 340 7e-92
gi|226360365|ref|YP_002778143.1| turgor pressure transcriptional... 338 2e-91
gi|302525129|ref|ZP_07277471.1| phosphate regulon transcriptiona... 333 1e-89
gi|291007109|ref|ZP_06565082.1| sensor histidine kinase [Sacchar... 331 5e-89
gi|134102522|ref|YP_001108183.1| two-component response regulato... 330 1e-88
gi|256379954|ref|YP_003103614.1| winged helix family two compone... 326 1e-87
gi|326384127|ref|ZP_08205810.1| response regulator receiver [Gor... 318 5e-85
gi|289442448|ref|ZP_06432192.1| transcriptional regulator kdpE [... 317 6e-85
gi|54023538|ref|YP_117780.1| putative two-component system respo... 317 9e-85
gi|300783817|ref|YP_003764108.1| two-component system response r... 314 6e-84
gi|333921901|ref|YP_004495482.1| phosphate regulon transcription... 314 7e-84
gi|116671596|ref|YP_832529.1| two component transcriptional regu... 308 3e-82
gi|262203938|ref|YP_003275146.1| response regulator receiver [Go... 307 8e-82
gi|291454638|ref|ZP_06594028.1| response regulator [Streptomyces... 305 3e-81
gi|119960910|ref|YP_948727.1| KDP operon transcriptional regulat... 297 7e-79
gi|182435453|ref|YP_001823172.1| putative two-component system r... 293 9e-78
gi|311896069|dbj|BAJ28477.1| putative two-component system respo... 291 4e-77
gi|284034649|ref|YP_003384580.1| winged helix family two compone... 288 4e-76
gi|302554679|ref|ZP_07307021.1| phosphate regulon transcriptiona... 287 7e-76
gi|297559280|ref|YP_003678254.1| two component transcriptional r... 287 1e-75
gi|328885593|emb|CCA58832.1| DNA-binding response regulator KdpE... 287 1e-75
gi|297153701|gb|ADI03413.1| putative two-component system respon... 286 2e-75
gi|29828937|ref|NP_823571.1| two-component system response regul... 285 3e-75
gi|325001104|ref|ZP_08122216.1| two component transcriptional re... 284 7e-75
gi|163839669|ref|YP_001624074.1| two-component response regulato... 284 8e-75
gi|326443958|ref|ZP_08218692.1| putative two-component system re... 283 1e-74
gi|302541993|ref|ZP_07294335.1| DNA-binding response regulator K... 283 1e-74
gi|294815609|ref|ZP_06774252.1| putative two-component system re... 283 2e-74
gi|337768622|emb|CCB77335.1| KDP operon transcriptional regulato... 282 2e-74
gi|297156667|gb|ADI06379.1| putative two-component system respon... 282 3e-74
>gi|15608167|ref|NP_215543.1| transcriptional regulatory protein KdpE [Mycobacterium tuberculosis
H37Rv]
gi|15840457|ref|NP_335494.1| DNA-binding response regulator KdpE [Mycobacterium tuberculosis
CDC1551]
gi|31792218|ref|NP_854711.1| transcriptional regulatory protein KdpE [Mycobacterium bovis
AF2122/97]
70 more sequence titles
Length=226
Score = 454 bits (1168), Expect = 5e-126, Method: Compositional matrix adjust.
Identities = 226/226 (100%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG
Sbjct 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE
Sbjct 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
>gi|167968526|ref|ZP_02550803.1| transcriptional regulatory protein kdpE [Mycobacterium tuberculosis
H37Ra]
Length=226
Score = 452 bits (1164), Expect = 1e-125, Method: Compositional matrix adjust.
Identities = 225/226 (99%), Positives = 226/226 (100%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPD+VILDLGLPDMSG
Sbjct 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDLVILDLGLPDMSG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE
Sbjct 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
>gi|289757111|ref|ZP_06516489.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
gi|294995216|ref|ZP_06800907.1| transcriptional regulator kdpE [Mycobacterium tuberculosis 210]
gi|289712675|gb|EFD76687.1| transcriptional regulatory protein [Mycobacterium tuberculosis
T85]
gi|326904745|gb|EGE51678.1| transcriptional regulator kdpE [Mycobacterium tuberculosis W-148]
gi|339294029|gb|AEJ46140.1| transcriptional regulatory protein kdpE [Mycobacterium tuberculosis
CCDC5079]
gi|339297669|gb|AEJ49779.1| transcriptional regulatory protein kdpE [Mycobacterium tuberculosis
CCDC5180]
Length=226
Score = 452 bits (1162), Expect = 2e-125, Method: Compositional matrix adjust.
Identities = 225/226 (99%), Positives = 225/226 (99%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMS
Sbjct 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSS 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE
Sbjct 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
>gi|296169900|ref|ZP_06851512.1| KDP operon response regulator KdpE [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895456|gb|EFG75158.1| KDP operon response regulator KdpE [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length=226
Score = 428 bits (1100), Expect = 3e-118, Method: Compositional matrix adjust.
Identities = 210/225 (94%), Positives = 219/225 (98%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRINL+VRGY+VITAS+GAGALRAAAEH PDVV+LDLGLPD+SG
Sbjct 1 MTRVLVIDDEPQILRALRINLSVRGYEVITASSGAGALRAAAEHKPDVVVLDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+ELEQPVIETD+FTVDLA KKVIK+GAEVHLTPTEWGMLEML RNRGKLVGR ELLKE
Sbjct 121 AASELEQPVIETDTFTVDLAAKKVIKNGAEVHLTPTEWGMLEMLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
>gi|41407093|ref|NP_959929.1| KdpE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118466690|ref|YP_880417.1| KDP operon transcriptional regulator KdpE [Mycobacterium avium
104]
gi|254774017|ref|ZP_05215533.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
avium subsp. avium ATCC 25291]
gi|41395444|gb|AAS03312.1| KdpE [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118167977|gb|ABK68874.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
avium 104]
Length=226
Score = 424 bits (1089), Expect = 6e-117, Method: Compositional matrix adjust.
Identities = 206/226 (92%), Positives = 219/226 (97%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRINL+VRGY+V+TASTGAGALRAAAEH PDVVILDLGLPD+SG
Sbjct 1 MTRVLVIDDEPQILRALRINLSVRGYEVVTASTGAGALRAAAEHKPDVVILDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+E+EQPV+ET+SFTVDLA KKV K+G+EVHLTPTEWGMLE+L RNRGKLVGR ELLKE
Sbjct 121 AASEMEQPVVETESFTVDLAAKKVTKNGSEVHLTPTEWGMLEVLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLE+DPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLENDPSHPKHLLTESGMGYRFEA 226
>gi|254820274|ref|ZP_05225275.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
intracellulare ATCC 13950]
Length=226
Score = 419 bits (1076), Expect = 2e-115, Method: Compositional matrix adjust.
Identities = 205/225 (92%), Positives = 217/225 (97%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRINL+VRGY+V+TAS+GAGALRAAAEH PDVVILDLGLPD+SG
Sbjct 1 MTRVLVIDDEPQILRALRINLSVRGYEVVTASSGAGALRAAAEHKPDVVILDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+E+EQPVIET+SFTVDLA KKV K+G EVHLTPTEWGMLE+L RNRGKLVGR ELLKE
Sbjct 121 AASEVEQPVIETESFTVDLAAKKVSKNGGEVHLTPTEWGMLEVLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYATETHYLRVYLAQLRRKLEDDPS+PKHLLTESGMGYRFE
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSNPKHLLTESGMGYRFE 225
>gi|240169880|ref|ZP_04748539.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
kansasii ATCC 12478]
Length=226
Score = 397 bits (1020), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 208/226 (93%), Positives = 218/226 (97%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEP ILRALRINLTVRGY+VITASTGAGALRAAAEHPPDVVILDLGLPD+SG
Sbjct 1 MTRVLVIDDEPHILRALRINLTVRGYEVITASTGAGALRAAAEHPPDVVILDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRN
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+E++QPV+ETD+FTVDLA KKV K+GAEVHLTPTEWGMLE+L RNRGKLVGR ELLKE
Sbjct 121 AASEVDQPVVETDAFTVDLAAKKVTKNGAEVHLTPTEWGMLEVLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
>gi|342861631|ref|ZP_08718277.1| KDP operon transcriptional regulator KdpE [Mycobacterium colombiense
CECT 3035]
gi|342130765|gb|EGT84061.1| KDP operon transcriptional regulator KdpE [Mycobacterium colombiense
CECT 3035]
Length=226
Score = 397 bits (1019), Expect = 7e-109, Method: Compositional matrix adjust.
Identities = 208/226 (93%), Positives = 218/226 (97%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRINLTVRGY+VITAS+GAGALRAAAEH PDVVILDLGLPD+SG
Sbjct 1 MTRVLVIDDEPQILRALRINLTVRGYEVITASSGAGALRAAAEHKPDVVILDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRN
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+ELEQPVIET+SFTVDLA KKV K+G+EVHLTPTEWGMLE+L RNRGKLVGR ELLKE
Sbjct 121 AASELEQPVIETESFTVDLAAKKVTKNGSEVHLTPTEWGMLEVLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYATETHYLRVYLAQLRRKLE+DPSHPKHLLTESGMGYRFEA
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLENDPSHPKHLLTESGMGYRFEA 226
>gi|336461326|gb|EGO40197.1| response regulator with CheY-like receiver domain-containing
protein [Mycobacterium avium subsp. paratuberculosis S397]
Length=214
Score = 393 bits (1009), Expect = 1e-107, Method: Compositional matrix adjust.
Identities = 191/212 (91%), Positives = 204/212 (97%), Gaps = 0/212 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRINL+VRGY+V+TASTGAGALRAAAEH PDVVILDLGLPD+SG
Sbjct 1 MTRVLVIDDEPQILRALRINLSVRGYEVVTASTGAGALRAAAEHKPDVVILDLGLPDISG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
IDVL GLRGWLTAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRRNT
Sbjct 61 IDVLAGLRGWLTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AA+E+EQPV+ET+SFTVDLA KKV K+G+EVHLTPTEWGMLE+L RNRGKLVGR ELLKE
Sbjct 121 AASEMEQPVVETESFTVDLAAKKVTKNGSEVHLTPTEWGMLEVLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPK 212
VWGPAYATETHYLRVYLAQLRRKLE+DPSHP
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLENDPSHPN 212
>gi|120405713|ref|YP_955542.1| two component transcriptional regulator [Mycobacterium vanbaalenii
PYR-1]
gi|119958531|gb|ABM15536.1| two component transcriptional regulator, winged helix family
[Mycobacterium vanbaalenii PYR-1]
Length=230
Score = 385 bits (988), Expect = 3e-105, Method: Compositional matrix adjust.
Identities = 188/224 (84%), Positives = 205/224 (92%), Gaps = 0/224 (0%)
Query 2 TLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGI 61
T VLVIDDEPQILRALRINL+VRGY+V TA++GA ALR AA+H PDVV+LDLGLPDM+GI
Sbjct 6 TRVLVIDDEPQILRALRINLSVRGYEVHTAASGAEALRMAADHKPDVVVLDLGLPDMTGI 65
Query 62 DVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTA 121
+VL GLRGWL+APVIVLSAR+DS+DKV+ALDAGADDYVTKPFGMDEFLARLRAAVRR
Sbjct 66 EVLAGLRGWLSAPVIVLSARSDSADKVEALDAGADDYVTKPFGMDEFLARLRAAVRRGAT 125
Query 122 AAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEV 181
AAE ++PVIET SFTVDLA KKV K G EVHLTPTEWGMLEML R+RGKLVGR ELLKEV
Sbjct 126 AAETDEPVIETSSFTVDLAAKKVTKGGVEVHLTPTEWGMLEMLVRHRGKLVGREELLKEV 185
Query 182 WGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
WGPAYA ETHYLRVYLAQLRRKLEDDPSHP HLLTE+GMGYRF+
Sbjct 186 WGPAYAKETHYLRVYLAQLRRKLEDDPSHPVHLLTEAGMGYRFQ 229
>gi|333989633|ref|YP_004522247.1| transcriptional regulator [Mycobacterium sp. JDM601]
gi|333485601|gb|AEF34993.1| transcriptional regulatory protein KdpE [Mycobacterium sp. JDM601]
Length=227
Score = 370 bits (951), Expect = 7e-101, Method: Compositional matrix adjust.
Identities = 190/224 (85%), Positives = 208/224 (93%), Gaps = 0/224 (0%)
Query 2 TLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGI 61
T VLV+DDEPQILRAL+INL+VRGY+V+TA+TGAGALRAAAEH PDVVILDLGLPD+SGI
Sbjct 3 TRVLVVDDEPQILRALKINLSVRGYEVVTAATGAGALRAAAEHRPDVVILDLGLPDISGI 62
Query 62 DVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTA 121
+VL GLRGWLT PVIVLSARTDS+DKV+ALDAGADDYVTKPFGMDEFLARLRAA RRN
Sbjct 63 EVLAGLRGWLTVPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARLRAAARRNAT 122
Query 122 AAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEV 181
AAE++QP++ET SFTVDLA KKV K+G EVHLTPTEWGMLEML RNRGKLVGR ELL +V
Sbjct 123 AAEIDQPIVETSSFTVDLAAKKVTKNGGEVHLTPTEWGMLEMLVRNRGKLVGRDELLTQV 182
Query 182 WGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
WGPAYA ET YLRVYLAQLRRKLEDDPS+PKHLLTE+GMGYRFE
Sbjct 183 WGPAYAKETQYLRVYLAQLRRKLEDDPSNPKHLLTEAGMGYRFE 226
>gi|118472637|ref|YP_889637.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
smegmatis str. MC2 155]
gi|118173924|gb|ABK74820.1| KDP operon transcriptional regulatory protein KdpE [Mycobacterium
smegmatis str. MC2 155]
Length=230
Score = 366 bits (940), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 192/225 (86%), Positives = 207/225 (92%), Gaps = 1/225 (0%)
Query 2 TLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGI 61
T VLVIDDEPQILRALRINL+VRGY+V TA++GA AL +AA+H PDV++LDLGLPDMSGI
Sbjct 7 TRVLVIDDEPQILRALRINLSVRGYEVRTAASGAEALHSAADHRPDVIVLDLGLPDMSGI 66
Query 62 DVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTA 121
+VL GLRGWL+APVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAA R A
Sbjct 67 EVLHGLRGWLSAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAAR-RAA 125
Query 122 AAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEV 181
E +QPVIET SFTVDLA KKVIK+GAEVHLTPTEWGMLEML RNRGKLVGR ELL+EV
Sbjct 126 VPETDQPVIETTSFTVDLAAKKVIKNGAEVHLTPTEWGMLEMLVRNRGKLVGREELLREV 185
Query 182 WGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
WGPAYATETHYLRVYLAQLRRKLEDDPSHP HLLTE+GMGYRFEA
Sbjct 186 WGPAYATETHYLRVYLAQLRRKLEDDPSHPVHLLTEAGMGYRFEA 230
>gi|226307209|ref|YP_002767169.1| turgor pressure transcriptional regulator [Rhodococcus erythropolis
PR4]
gi|226186326|dbj|BAH34430.1| turgor pressure transcriptional regulator [Rhodococcus erythropolis
PR4]
Length=226
Score = 363 bits (932), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 183/224 (82%), Positives = 203/224 (91%), Gaps = 0/224 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
M+ +LV+DDEPQILRALRINLTVRGY V+TASTGAGALRAAAE PPDVVILDLGLPDM G
Sbjct 1 MSRILVVDDEPQILRALRINLTVRGYDVVTASTGAGALRAAAERPPDVVILDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW TAPVIVLSARTDS+DKV+ALDAGADDYVTKPFGMDEFLAR+RAA RR T
Sbjct 61 TEVLAGLRGWCTAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARVRAAARRGT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+AA+ +P +ET SFTVDLA K V + G +VHLTPTEWGMLEML RNRGKLVG+ ELL+E
Sbjct 121 SAADTSEPSVETASFTVDLAAKTVSRRGEQVHLTPTEWGMLEMLVRNRGKLVGQKELLRE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRF 224
VWGPAY TETHYLRVYLAQLRRKLEDDP++PKHL+TE+GMGYRF
Sbjct 181 VWGPAYDTETHYLRVYLAQLRRKLEDDPANPKHLITEAGMGYRF 224
>gi|108801194|ref|YP_641391.1| two component transcriptional regulator [Mycobacterium sp. MCS]
gi|119870326|ref|YP_940278.1| two component transcriptional regulator [Mycobacterium sp. KMS]
gi|126437173|ref|YP_001072864.1| two component transcriptional regulator [Mycobacterium sp. JLS]
gi|108771613|gb|ABG10335.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. MCS]
gi|119696415|gb|ABL93488.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. KMS]
gi|126236973|gb|ABO00374.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. JLS]
Length=226
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 185/225 (83%), Positives = 209/225 (93%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRAL+INL+VRGY+V TA+TGA ALR+AA+H PDV++LDLGLPDMSG
Sbjct 1 MTRVLVVDDEPQILRALKINLSVRGYEVTTAATGAEALRSAADHKPDVIVLDLGLPDMSG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
I+VL GLRGWL+APVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRR T
Sbjct 61 IEVLAGLRGWLSAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRAT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
++ ++PV+ T SFTVDLA K+V+K+GAEVHLTPTEWGMLEML R+RGKLVGR ELLKE
Sbjct 121 KESDGDEPVVVTGSFTVDLAAKRVVKNGAEVHLTPTEWGMLEMLVRHRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYA ETHYLRVYLAQLRRKLEDDPS P+HLLTE+GMGYRF+
Sbjct 181 VWGPAYAKETHYLRVYLAQLRRKLEDDPSRPRHLLTEAGMGYRFQ 225
>gi|229493212|ref|ZP_04387004.1| KDP operon transcriptional regulatory protein KdpE [Rhodococcus
erythropolis SK121]
gi|229319943|gb|EEN85772.1| KDP operon transcriptional regulatory protein KdpE [Rhodococcus
erythropolis SK121]
Length=226
Score = 362 bits (930), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/224 (81%), Positives = 204/224 (92%), Gaps = 0/224 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
M+ +LV+DDEPQILRALRINL+VRGY+V+TASTGAGALRAAAE PPDVV+LDLGLPDM G
Sbjct 1 MSRILVVDDEPQILRALRINLSVRGYEVVTASTGAGALRAAAERPPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW TAPVIVLSARTDS+DKV+ALDAGADDYVTKPFGMDEFLAR+RAA RR T
Sbjct 61 TEVLAGLRGWCTAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARVRAAARRGT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+AA+ +P +ET SFTVDLA K V + G +VHLTPTEWGMLEML RNRGKLVG+ ELL+E
Sbjct 121 SAADTSEPSVETASFTVDLAAKTVSRRGEQVHLTPTEWGMLEMLVRNRGKLVGQKELLRE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRF 224
VWGPAY TETHYLRVYLAQLRRKLEDDP++PKHL+TE+GMGYRF
Sbjct 181 VWGPAYDTETHYLRVYLAQLRRKLEDDPANPKHLITEAGMGYRF 224
>gi|317506419|ref|ZP_07964224.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
gi|316255299|gb|EFV14564.1| response regulator receiver domain-containing protein [Segniliparus
rugosus ATCC BAA-974]
Length=226
Score = 358 bits (919), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 175/225 (78%), Positives = 192/225 (86%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRALRINLT RG+ V TASTGAGALRAAAE P+VV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQILRALRINLTARGFDVTTASTGAGALRAAAERQPEVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW PVIVLSARTDSS+KV ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 FEVLAGLRGWTNVPVIVLSARTDSSEKVDALDAGADDYVTKPFGMDELLARLRAAVRRGA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+PV+ TDSF VDL KKV KDGAEVHLTPTEWGMLE+L RN+GKLV + +LL E
Sbjct 121 RTQGEGEPVVVTDSFAVDLVAKKVTKDGAEVHLTPTEWGMLELLVRNQGKLVSQKDLLSE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGP+Y TETHYLRVYLAQLRRKLE DP+HP+HL+TE+GMGYRFE
Sbjct 181 VWGPSYKTETHYLRVYLAQLRRKLEADPAHPRHLITEAGMGYRFE 225
>gi|169630331|ref|YP_001703980.1| transcriptional regulatory protein KdpE [Mycobacterium abscessus
ATCC 19977]
gi|169242298|emb|CAM63326.1| Probable transcriptional regulatory protein KdpE [Mycobacterium
abscessus]
Length=224
Score = 357 bits (916), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 174/225 (78%), Positives = 198/225 (88%), Gaps = 2/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRA+RINL+ RGY+V+TAS+GAGALRAAAE P+VVILDLGLPDM G
Sbjct 1 MTRVLVVDDEPQILRAMRINLSARGYEVVTASSGAGALRAAAETQPEVVILDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW PVIVLSARTDS+DKV+ALDAGADDYVTKPFGMDEFLARLRAAVRR T
Sbjct 61 TEVLAGLRGWTDVPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARLRAAVRRGT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+ +PV+ T++F VDL+ KVI+DG EVHLTPTEW ML +L RNRGKLVG+ ELL E
Sbjct 121 PDS--AEPVVHTETFDVDLSSHKVIRDGREVHLTPTEWSMLAVLVRNRGKLVGQKELLHE 178
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAY++ETHYLRVYLAQLRRKLE DP+HPKHLLTE+GMGYRF+
Sbjct 179 VWGPAYSSETHYLRVYLAQLRRKLEIDPAHPKHLLTEAGMGYRFQ 223
>gi|312140452|ref|YP_004007788.1| two component system response regulator kdpe [Rhodococcus equi
103S]
gi|325675932|ref|ZP_08155615.1| KDP operon response regulator KdpE [Rhodococcus equi ATCC 33707]
gi|311889791|emb|CBH49108.1| two component system response regulator KdpE [Rhodococcus equi
103S]
gi|325553170|gb|EGD22849.1| KDP operon response regulator KdpE [Rhodococcus equi ATCC 33707]
Length=226
Score = 348 bits (892), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 189/225 (84%), Positives = 206/225 (92%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRALRINL+VRGY+V TASTGA ALRAAAE P+V++LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQILRALRINLSVRGYEVTTASTGAAALRAAAERHPEVIVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
I+VL GLRGW TAPVIVLSARTDSSDKV+ALDAGADDYVTKPFGMDEFLARLRAAVRR
Sbjct 61 IEVLAGLRGWCTAPVIVLSARTDSSDKVEALDAGADDYVTKPFGMDEFLARLRAAVRRGA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
AAAE +PV+ TDSFTVDLA KKV +DGAEVHLTPTEWGMLEML RN+GKLVG+ ELL+E
Sbjct 121 AAAETGEPVVVTDSFTVDLAAKKVTRDGAEVHLTPTEWGMLEMLVRNKGKLVGQKELLRE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYATETHYLRVYLAQLRRKLE DPS P+HLLTE+GMGYRF+
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEVDPSKPRHLLTETGMGYRFQ 225
>gi|183980660|ref|YP_001848951.1| transcriptional regulatory protein KdpE [Mycobacterium marinum
M]
gi|183173986|gb|ACC39096.1| transcriptional regulatory protein KdpE [Mycobacterium marinum
M]
Length=226
Score = 347 bits (891), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/226 (85%), Positives = 206/226 (92%), Gaps = 0/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLVIDDEPQILRALRIN +VRGY V+TA+TGA ALRAAAE PDVVILDLGLPDMSG
Sbjct 1 MTRVLVIDDEPQILRALRINFSVRGYDVVTAATGAAALRAAAEQRPDVVILDLGLPDMSG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
I+VL GLRGW +APVIVLSAR+DSSDKVQALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 IEVLAGLRGWFSAPVIVLSARSDSSDKVQALDAGADDYVTKPFGMDELLARLRAAVRRAA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A + +QPVIET SFTVDLA KKVIK+G+EVHLTPTEWGMLEML RNRGKLVGR ELLKE
Sbjct 121 TATDTDQPVIETSSFTVDLATKKVIKNGSEVHLTPTEWGMLEMLVRNRGKLVGREELLKE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
VWGPAYA ETHYLRVYLAQLRRKLEDDP+HP+HLLTE+GMGYRF+
Sbjct 181 VWGPAYAKETHYLRVYLAQLRRKLEDDPAHPRHLLTEAGMGYRFDG 226
>gi|296393295|ref|YP_003658179.1| transcriptional regulator [Segniliparus rotundus DSM 44985]
gi|296180442|gb|ADG97348.1| two component transcriptional regulator, winged helix family
[Segniliparus rotundus DSM 44985]
Length=250
Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 169/225 (76%), Positives = 189/225 (84%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT +LV+DDEPQILRALRINLT RG+ V TASTGAGALRAAA+ P+VV+LDLGLPDM G
Sbjct 1 MTKILVVDDEPQILRALRINLTARGFDVTTASTGAGALRAAAQCHPEVVLLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW PVIVLSARTDSS+KV ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 FEVLAGLRGWTKIPVIVLSARTDSSEKVDALDAGADDYVTKPFGMDELLARLRAAVRRGA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+PV+ DSF VDL KKV KD EVHLTPTEWG+LE+L RN+GKLV + E+L E
Sbjct 121 NNQPGGEPVVAADSFVVDLVAKKVTKDDKEVHLTPTEWGVLELLVRNQGKLVSQKEILSE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGP+Y TETHYLRVYLAQLRRKLE DP++P+HLLTE+GMGYRFE
Sbjct 181 VWGPSYKTETHYLRVYLAQLRRKLEADPANPRHLLTEAGMGYRFE 225
>gi|111018238|ref|YP_701210.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
gi|110817768|gb|ABG93052.1| response regulator, two-component system [Rhodococcus jostii
RHA1]
Length=226
Score = 340 bits (873), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 182/225 (81%), Positives = 204/225 (91%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRALRINL+VRGY V+TA++GA ALRAAAE PPDV++LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQILRALRINLSVRGYDVVTAASGAAALRAAAERPPDVIVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW APVIVLSARTDS+DKV+ALDAGADDYVTKPFGMDEFLAR+RAA RR T
Sbjct 61 TEVLAGLRGWCPAPVIVLSARTDSADKVEALDAGADDYVTKPFGMDEFLARVRAAARRAT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A + +PV+ETDSFTVDLA K V + GAEVHLTPTEWGMLEML RN+GKLVG+ ELL+E
Sbjct 121 TAVDTSEPVVETDSFTVDLAAKTVRRAGAEVHLTPTEWGMLEMLVRNKGKLVGQKELLRE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYATETHYLRVYLAQLRRKLEDDPSHP+HL+TE+GMGYRF+
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPRHLITEAGMGYRFQ 225
>gi|226360365|ref|YP_002778143.1| turgor pressure transcriptional regulator KdpE [Rhodococcus opacus
B4]
gi|226238850|dbj|BAH49198.1| turgor pressure transcriptional regulator KdpE [Rhodococcus opacus
B4]
Length=226
Score = 338 bits (868), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 181/225 (81%), Positives = 203/225 (91%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT +LV+DDEPQILRALRINL+VRGY V+TA++GA ALRAAAE PPDV++LDLGLPDM G
Sbjct 1 MTRILVVDDEPQILRALRINLSVRGYDVVTAASGAAALRAAAERPPDVIVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+VL GLRGW APVIVLSARTDS+DKV ALDAGADDYVTKPFGMDEFLAR+RAA RR T
Sbjct 61 TEVLAGLRGWCPAPVIVLSARTDSADKVDALDAGADDYVTKPFGMDEFLARVRAAARRAT 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A + +PV+ETDSFTVDLA K V + GAEVHLTPTEWGMLEML RN+GKLVG+ ELL+E
Sbjct 121 TAVDTSEPVVETDSFTVDLAAKTVRRAGAEVHLTPTEWGMLEMLVRNKGKLVGQKELLRE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYATETHYLRVYLAQLRRKLEDDPSHP+HL+TE+GMGYRF+
Sbjct 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPRHLITEAGMGYRFQ 225
>gi|302525129|ref|ZP_07277471.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
gi|302434024|gb|EFL05840.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
sp. AA4]
Length=232
Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/224 (72%), Positives = 190/224 (85%), Gaps = 1/224 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DDEPQI+RALRINL RGY+VITA G AL+A AE PDVV+LDLGLPD+ G +V
Sbjct 9 VLVVDDEPQIVRALRINLNARGYKVITAHDGTAALKAVAETKPDVVVLDLGLPDLDGTEV 68
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT-AA 122
+ GLRGW T P+IVLSAR DS+DKVQALDAGADDYVTKPFGMDE LARLRAAVRR++ A
Sbjct 69 IAGLRGWTTVPIIVLSARGDSADKVQALDAGADDYVTKPFGMDELLARLRAAVRRSSVAG 128
Query 123 AELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVW 182
+ + V++T SFT+DLA KKV+++G EVHLT TEWG+LE+L RNRG+LV + +LL EVW
Sbjct 129 TDGAEAVVDTGSFTIDLAAKKVLREGREVHLTKTEWGVLELLVRNRGRLVAQKQLLHEVW 188
Query 183 GPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
GP+Y TE+HYLRVYLAQLRRKLE +PS P+HLLTE GMGYRFEA
Sbjct 189 GPSYETESHYLRVYLAQLRRKLEPEPSRPRHLLTEPGMGYRFEA 232
>gi|291007109|ref|ZP_06565082.1| sensor histidine kinase [Saccharopolyspora erythraea NRRL 2338]
Length=1105
Score = 331 bits (849), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 169/225 (76%), Positives = 194/225 (87%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQ+LRALRINLT RGY+V+TA G ALRAA + PD V+LDLGLPDM G
Sbjct 880 MTRVLVVDDEPQLLRALRINLTARGYEVLTAVDGKAALRAAGDGKPDAVVLDLGLPDMDG 939
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+V+ GLRGW T P+IVLSARTDS+DKV ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 940 SEVIAGLRGWTTVPIIVLSARTDSTDKVHALDAGADDYVTKPFGMDELLARLRAAVRRAN 999
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A +QPV+ET +F+VDLA KKV ++GAEVHLTPTEWGMLE+L RN+G+LVG+ +LLK+
Sbjct 1000 TADREDQPVVETATFSVDLAAKKVRREGAEVHLTPTEWGMLEVLVRNKGRLVGQKQLLKD 1059
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYA ETHYLRVYLAQLRRKLE DPS P+HL+TE+GMGYRFE
Sbjct 1060 VWGPAYANETHYLRVYLAQLRRKLEADPSRPRHLITEAGMGYRFE 1104
>gi|134102522|ref|YP_001108183.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
gi|133915145|emb|CAM05258.1| two-component response regulator [Saccharopolyspora erythraea
NRRL 2338]
Length=226
Score = 330 bits (845), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/225 (76%), Positives = 194/225 (87%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQ+LRALRINLT RGY+V+TA G ALRAA + PD V+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQLLRALRINLTARGYEVLTAVDGKAALRAAGDGKPDAVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+V+ GLRGW T P+IVLSARTDS+DKV ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 SEVIAGLRGWTTVPIIVLSARTDSTDKVHALDAGADDYVTKPFGMDELLARLRAAVRRAN 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A +QPV+ET +F+VDLA KKV ++GAEVHLTPTEWGMLE+L RN+G+LVG+ +LLK+
Sbjct 121 TADREDQPVVETATFSVDLAAKKVRREGAEVHLTPTEWGMLEVLVRNKGRLVGQKQLLKD 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYA ETHYLRVYLAQLRRKLE DPS P+HL+TE+GMGYRFE
Sbjct 181 VWGPAYANETHYLRVYLAQLRRKLEADPSRPRHLITEAGMGYRFE 225
>gi|256379954|ref|YP_003103614.1| winged helix family two component transcriptional regulator [Actinosynnema
mirum DSM 43827]
gi|255924257|gb|ACU39768.1| two component transcriptional regulator, winged helix family
[Actinosynnema mirum DSM 43827]
Length=226
Score = 326 bits (836), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/225 (74%), Positives = 192/225 (86%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RALRINL+ RGYQV+TA GA ALRAAAE PDVV+LDLGLPD+ G
Sbjct 1 MTKVLVVDDEPQIVRALRINLSARGYQVLTAHDGAAALRAAAEGKPDVVVLDLGLPDVDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+V+ GLRGW T P+IVLSAR DS+DKV+ALDAGADDYVTKPFGMDE LARLRAAVRR+
Sbjct 61 TEVIAGLRGWTTVPIIVLSARADSTDKVEALDAGADDYVTKPFGMDELLARLRAAVRRSA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A A+ + V+ T +FTVDL KKV ++ AEVHLTPTEWG+LE+L RN GKLV + +LL+E
Sbjct 121 APADAGEAVVRTGAFTVDLVAKKVHREDAEVHLTPTEWGLLEVLVRNPGKLVAQRQLLQE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAYA ETHYLRVYLAQLRRKLE +PS P+HL+TE GMGYRFE
Sbjct 181 VWGPAYAKETHYLRVYLAQLRRKLEPEPSRPRHLVTEPGMGYRFE 225
>gi|326384127|ref|ZP_08205810.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
gi|326197287|gb|EGD54478.1| response regulator receiver [Gordonia neofelifaecis NRRL B-59395]
Length=230
Score = 318 bits (814), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/222 (70%), Positives = 182/222 (82%), Gaps = 1/222 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DDEPQ+LRALRINL RG++V TA+TGA AL AA++ PPDVV+LDLGLPDM G V
Sbjct 7 VLVVDDEPQLLRALRINLRARGFEVTTAATGAQALEAASKRPPDVVVLDLGLPDMDGFTV 66
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA 123
L GLRGW + PVIVLSARTD++DKVQALDAGADDYVTKPFGM+EFLARLRAA+RR TA+
Sbjct 67 LAGLRGWTSVPVIVLSARTDAADKVQALDAGADDYVTKPFGMEEFLARLRAAIRRGTASG 126
Query 124 -ELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVW 182
E PV+ + VDLA K+V +DG V LTPTEWG+LE+L R+ LVG+ E+L VW
Sbjct 127 IPAEAPVVRAGALEVDLAAKRVTRDGEPVRLTPTEWGVLELLVRSEPNLVGQREILTAVW 186
Query 183 GPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRF 224
GP Y +T+YLRVYLA LRRKLE DPSHP+HL+TE+GMGYRF
Sbjct 187 GPTYVNQTNYLRVYLAALRRKLEADPSHPRHLITEAGMGYRF 228
>gi|289442448|ref|ZP_06432192.1| transcriptional regulator kdpE [Mycobacterium tuberculosis T46]
gi|289415367|gb|EFD12607.1| transcriptional regulator kdpE [Mycobacterium tuberculosis T46]
Length=159
Score = 317 bits (813), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/156 (100%), Positives = 156/156 (100%), Gaps = 0/156 (0%)
Query 71 LTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAAELEQPVI 130
LTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAAELEQPVI
Sbjct 4 LTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAAELEQPVI 63
Query 131 ETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWGPAYATET 190
ETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWGPAYATET
Sbjct 64 ETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWGPAYATET 123
Query 191 HYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
HYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA
Sbjct 124 HYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 159
>gi|54023538|ref|YP_117780.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
gi|54015046|dbj|BAD56416.1| putative two-component system response regulator [Nocardia farcinica
IFM 10152]
Length=226
Score = 317 bits (812), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 160/225 (72%), Positives = 190/225 (85%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT +LV+DDEPQILRALRINLT RGY+V+TA+ G ALRAAA+ PDV++LDLGLPD+ G
Sbjct 1 MTRILVVDDEPQILRALRINLTARGYEVVTAADGRSALRAAAQQRPDVIVLDLGLPDLDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
I+VL GL GW +APVIVLSAR+D++DKV ALD GADDYVTKPFGM+EFLAR+RAAVRR
Sbjct 61 IEVLAGLHGWCSAPVIVLSARSDAADKVAALDTGADDYVTKPFGMEEFLARIRAAVRRAA 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A +L +P + TD+F VDLA KKV +DGA+VHLTPTEW MLEML R+RGKLVG+ ELL E
Sbjct 121 ATPDLPEPTVVTDAFVVDLAAKKVTRDGADVHLTPTEWSMLEMLVRHRGKLVGQRELLTE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
+WGP+Y +THYLRVYL QLR KLE DPS P++L+TE G GYRFE
Sbjct 181 IWGPSYVGQTHYLRVYLTQLRHKLEPDPSRPRYLITEPGRGYRFE 225
>gi|300783817|ref|YP_003764108.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|299793331|gb|ADJ43706.1| two-component system response regulator [Amycolatopsis mediterranei
U32]
gi|340525210|gb|AEK40415.1| two-component system response regulator [Amycolatopsis mediterranei
S699]
Length=232
Score = 314 bits (805), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 161/224 (72%), Positives = 188/224 (84%), Gaps = 2/224 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DDEPQI+RALRINLT RGY+VITA G AL+A AE PDVV+LDLGLPD+ G +V
Sbjct 8 VLVVDDEPQIVRALRINLTARGYKVITAHDGTAALKAVAETKPDVVVLDLGLPDLDGTEV 67
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRN-TAA 122
+ GLRGW T P+IVLSAR DS+DKV+ALDAGADDYVTKPFGMDE LARLRAAVRR+ A
Sbjct 68 IAGLRGWTTVPIIVLSARGDSADKVEALDAGADDYVTKPFGMDELLARLRAAVRRSAVAG 127
Query 123 AELEQPVIETDSFTVDLAGKKVIK-DGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEV 181
A+ V++T SF+VDLA KKV + DG EVHLT TEWG+LE+L RNRG+LV + +LL EV
Sbjct 128 ADDADAVVDTASFSVDLAAKKVRRHDGVEVHLTKTEWGVLELLVRNRGRLVAQKQLLHEV 187
Query 182 WGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
WGP+Y TE+HYLRVYLAQLRRKLE +PS P+HLLTE G+GYRFE
Sbjct 188 WGPSYETESHYLRVYLAQLRRKLEREPSRPRHLLTEPGIGYRFE 231
>gi|333921901|ref|YP_004495482.1| phosphate regulon transcriptional regulator PhoB [Amycolicicoccus
subflavus DQS3-9A1]
gi|333484122|gb|AEF42682.1| Phosphate regulon transcriptional regulatory protein PhoB [Amycolicicoccus
subflavus DQS3-9A1]
Length=226
Score = 314 bits (804), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 150/224 (67%), Positives = 178/224 (80%), Gaps = 0/224 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDE QILRALRI L GY V TA+ G+ ALRA A PD+V+LDLGLPD+ G
Sbjct 1 MTTVLVVDDENQILRALRITLAAHGYTVKTAADGSAALRAVATEKPDIVVLDLGLPDIEG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
DV+ G+RGW T P++VLSARTDS DKV ALDAGADDYVTKPFGMDEFLARLR+A+RR
Sbjct 61 TDVIHGIRGWSTVPIVVLSARTDSGDKVAALDAGADDYVTKPFGMDEFLARLRSALRRAQ 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
V+E D T+DLA + V +DG++VHLTPTEW +LE+L RNRG+LV + ++L+
Sbjct 121 TVESTPDTVVEADGLTIDLAARCVRRDGSDVHLTPTEWSILELLVRNRGRLVTQKQVLQA 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRF 224
VWGP+Y TETHYLRVYLAQLRRKLE DPS P++LLTE GMGYRF
Sbjct 181 VWGPSYGTETHYLRVYLAQLRRKLEGDPSRPRYLLTEPGMGYRF 224
>gi|116671596|ref|YP_832529.1| two component transcriptional regulator [Arthrobacter sp. FB24]
gi|116611705|gb|ABK04429.1| two component transcriptional regulator, winged helix family
[Arthrobacter sp. FB24]
Length=224
Score = 308 bits (790), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 148/225 (66%), Positives = 181/225 (81%), Gaps = 2/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MTLVL+I+DE Q+ RA++INL GYQ ITA GA L+ AA+HP D+V+LDLGLPDM G
Sbjct 1 MTLVLIIEDEAQLARAMQINLRAHGYQAITAGLGADGLKLAAQHPVDIVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
++V+ G+RGW + PVIVLSAR S DKV+ALDAGADDYVTKPFG+DE LARLRAA RR+
Sbjct 61 VEVIRGIRGWSSVPVIVLSARHASEDKVEALDAGADDYVTKPFGLDELLARLRAASRRSP 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
A+ E P +ET F VDLA +KV++DG E+ LTPTEW +LE+L RN+GKLV + +LL +
Sbjct 121 --AQREAPTVETADFVVDLAARKVVRDGHEIRLTPTEWNILELLVRNQGKLVSQQQLLTQ 178
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWG AYA ET YLRVYLAQLRRKLE DP+ P+HL TE+GMGYRF+
Sbjct 179 VWGQAYAKETQYLRVYLAQLRRKLEQDPARPRHLHTEAGMGYRFD 223
>gi|262203938|ref|YP_003275146.1| response regulator receiver [Gordonia bronchialis DSM 43247]
gi|262087285|gb|ACY23253.1| response regulator receiver [Gordonia bronchialis DSM 43247]
Length=231
Score = 307 bits (786), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 150/224 (67%), Positives = 179/224 (80%), Gaps = 1/224 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DDEPQ+LRALRINL RG+ V TA+ G AL AA+ P VV+LDLGLPDM G+ V
Sbjct 7 VLVVDDEPQLLRALRINLNARGFAVTTAADGREALTAASRMDPHVVVLDLGLPDMDGLTV 66
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA 123
L GLRGW T PVIVLSAR+D++DKV ALDAGADDYVTKPFGM+EFLARLRAAVRR ++
Sbjct 67 LEGLRGWTTVPVIVLSARSDAADKVSALDAGADDYVTKPFGMEEFLARLRAAVRRGAVSS 126
Query 124 EL-EQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVW 182
L E P+++ SF VDLA K+V + G +HLTPTEW +LE+L RN GKLV + E+L VW
Sbjct 127 GLPEVPMVDAGSFQVDLAAKQVTRHGERIHLTPTEWEILEILVRNEGKLVSQKEILNSVW 186
Query 183 GPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFEA 226
GP Y +++YLRVYLA LRRKLEDDP HP+HL+TE+GMGYRF A
Sbjct 187 GPTYLGQSNYLRVYLASLRRKLEDDPVHPRHLITEAGMGYRFVA 230
>gi|291454638|ref|ZP_06594028.1| response regulator [Streptomyces albus J1074]
gi|291357587|gb|EFE84489.1| response regulator [Streptomyces albus J1074]
Length=231
Score = 305 bits (781), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 150/226 (67%), Positives = 179/226 (80%), Gaps = 1/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL +NL R Y+V +A G ALR AAE PDV++LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALELNLRARQYEVDSAGDGTTALRLAAERHPDVIVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+DVL GLR W PV+VLSAR S +KVQALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VDVLRGLRSWSRVPVLVLSARQSSDEKVQALDAGADDYVTKPFGMDELLARLRAAVRRTE 120
Query 121 -AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
AA + E V++ FTVDLA K+V + G +V LTPTEW +LE+L RN G+LV + +LL+
Sbjct 121 PAAPDEEAEVVDAADFTVDLAAKRVHRQGRDVRLTPTEWHLLEVLVRNTGRLVSQKQLLQ 180
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWGP+Y TE++YLRVY+AQLRRKLE DP+HP+H +TE GMGYRFE
Sbjct 181 EVWGPSYGTESNYLRVYMAQLRRKLETDPAHPRHFITEPGMGYRFE 226
>gi|119960910|ref|YP_948727.1| KDP operon transcriptional regulatory [Arthrobacter aurescens
TC1]
gi|119947769|gb|ABM06680.1| KDP operon transcriptional regulatory [Arthrobacter aurescens
TC1]
Length=224
Score = 297 bits (761), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 139/225 (62%), Positives = 178/225 (80%), Gaps = 2/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MTLVL+++DE +I RA+++ L GYQ +T TGA AL+A A+ P ++V+LDLGLPDM G
Sbjct 1 MTLVLIVEDEARIARAMQVTLQANGYQALTVGTGADALQATAKQPVEIVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
++++ +RGW + P+IVLSAR S DKV+ALDAGADDYVTKPFG+DE LARLR A RR
Sbjct 61 VEIIRRIRGWSSMPIIVLSARHASEDKVEALDAGADDYVTKPFGLDELLARLRVASRR-- 118
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
E E+P + T F VDLAGKK++KDG+EV LTPTEW +LE+L RN+GKLV + ++L +
Sbjct 119 VVTEHEEPTLATTDFMVDLAGKKIVKDGSEVRLTPTEWNILELLVRNKGKLVSQQQILTQ 178
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWG AYA ET YLRVY+AQLRRKLE DP+ P+HL TE+GMGYRF+
Sbjct 179 VWGQAYAKETQYLRVYIAQLRRKLERDPAEPRHLHTEAGMGYRFD 223
>gi|182435453|ref|YP_001823172.1| putative two-component system response regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326776090|ref|ZP_08235355.1| two component transcriptional regulator, winged helix family
[Streptomyces cf. griseus XylebKG-1]
gi|178463969|dbj|BAG18489.1| putative two-component system response regulator [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|326656423|gb|EGE41269.1| two component transcriptional regulator, winged helix family
[Streptomyces griseus XylebKG-1]
Length=231
Score = 293 bits (751), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 150/230 (66%), Positives = 179/230 (78%), Gaps = 6/230 (2%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALVINLKARQYEVDAAPDGATALQLAAARHPDVVLLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRR-- 118
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRA+VRR
Sbjct 61 VEVIRGLRGWTRVPILVLSARHTSDEKVEALDAGADDYVTKPFGMDELLARLRASVRRAE 120
Query 119 ---NTAAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRG 175
AE + ++ET FTVDLA KKV + G +V LTPTEW +LE+L RN G+LV +
Sbjct 121 PVGQEGGAE-DIALVETAGFTVDLAAKKVHRAGRDVRLTPTEWHLLEVLVRNGGRLVSQK 179
Query 176 ELLKEVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
+LL+EVWGP+Y TET+YLRVY+AQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 180 QLLQEVWGPSYGTETNYLRVYMAQLRRKLEADPSHPRHFVTEPGMGYRFE 229
>gi|311896069|dbj|BAJ28477.1| putative two-component system response regulator [Kitasatospora
setae KM-6054]
Length=226
Score = 291 bits (745), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 153/225 (68%), Positives = 178/225 (80%), Gaps = 0/225 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V +A GA AL AA PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALVINLKARKYEVDSAHDGASALELAAARHPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
++V+ GLRGW P+IVLSAR S +KV+ALDAGADDYVTKPFGMDE LAR+RAAVRR
Sbjct 61 VEVIRGLRGWTRVPIIVLSARHASDEKVEALDAGADDYVTKPFGMDELLARMRAAVRRAE 120
Query 121 AAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+ V+ TDSFTVDLA KKV + GA+V LTPTEW +LE+L RN G+LV + +LL+E
Sbjct 121 PVTAEGESVVATDSFTVDLAAKKVNRQGADVRLTPTEWHLLEVLVRNSGRLVSQTQLLQE 180
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGPAY ET+YLRVYLAQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 181 VWGPAYRKETNYLRVYLAQLRRKLEADPSHPRHFITEPGMGYRFE 225
>gi|284034649|ref|YP_003384580.1| winged helix family two component transcriptional regulator [Kribbella
flavida DSM 17836]
gi|283813942|gb|ADB35781.1| two component transcriptional regulator, winged helix family
[Kribbella flavida DSM 17836]
Length=225
Score = 288 bits (737), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/226 (64%), Positives = 177/226 (79%), Gaps = 3/226 (1%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL+INL R Y+V A TG AL+ AA+HPPD+VILDLGLPD+ G
Sbjct 1 MTRVLVVDDEPQIVRALQINLKARRYEVHVAGTGTAALQVAAQHPPDLVILDLGLPDLDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
I+V+ GLRGW AP++VLS RTDS+DKV+ALDAGADDYVTKPFG+DE LAR+RAA+RR++
Sbjct 61 IEVIRGLRGWTEAPILVLSGRTDSTDKVEALDAGADDYVTKPFGIDELLARMRAALRRSS 120
Query 121 AAAELEQPVIETDSFTVDLAGKKV-IKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
EQPV+ VDLA K+V + +G +V LTPTEW +LE+L R+ GKL+ + +LL
Sbjct 121 GGT--EQPVVTVGEAKVDLAAKRVTLGNGEDVRLTPTEWHLLEVLVRHPGKLMSQRQLLL 178
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWGP Y T LR Y+AQLRRKLE DP+ P+HL TE GMGYRFE
Sbjct 179 EVWGPGYETAGGNLRFYMAQLRRKLEPDPARPQHLRTEPGMGYRFE 224
>gi|302554679|ref|ZP_07307021.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
viridochromogenes DSM 40736]
gi|302472297|gb|EFL35390.1| phosphate regulon transcriptional regulatory protein PhoB [Streptomyces
viridochromogenes DSM 40736]
Length=227
Score = 287 bits (735), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/226 (69%), Positives = 180/226 (80%), Gaps = 1/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALVINLKARKYEVDAAHDGATALKLAAARQPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+DV+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VDVIRGLRGWTRVPILVLSARHSSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 120
Query 121 AAAELEQP-VIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
A E V+ETD FTVDLA KKV++ G +V LTPTEW +LE+L R G+LVG+ +LL+
Sbjct 121 PAGGGEDDVVVETDEFTVDLAAKKVVRAGKDVRLTPTEWHLLEVLVRGGGRLVGQKQLLQ 180
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWGP+Y TET+YLRVY+AQLRRKLE DPSHPKH +TE GMGYRFE
Sbjct 181 EVWGPSYGTETNYLRVYMAQLRRKLEADPSHPKHFITEPGMGYRFE 226
>gi|297559280|ref|YP_003678254.1| two component transcriptional regulator [Nocardiopsis dassonvillei
subsp. dassonvillei DSM 43111]
gi|296843728|gb|ADH65748.1| two component transcriptional regulator, winged helix family
[Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111]
Length=231
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/222 (64%), Positives = 179/222 (81%), Gaps = 2/222 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DD+ QI+RA+RINL RG+ V TA+ GA ALR AA++ PDVV+LDLGLPDM G++V
Sbjct 3 VLVVDDDMQIIRAMRINLRARGHDVDTAADGASALRLAADNHPDVVLLDLGLPDMEGMEV 62
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA 123
+ LRGW P+IVLSAR + +KV+ LD+GADDYVTKPFGMDE LAR+RAA RR+
Sbjct 63 IQRLRGWSQVPIIVLSARHSAGEKVRCLDSGADDYVTKPFGMDELLARMRAAERRSVRVD 122
Query 124 ELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVWG 183
E PV+ T SFTVDL K+V+++G EV LTPTEW +LE+LAR+ G+LV + +LL +VWG
Sbjct 123 --EAPVVRTPSFTVDLGAKRVLREGEEVRLTPTEWHILEILARHAGQLVSQRQLLHDVWG 180
Query 184 PAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
PAY +ET+YLRVY+AQLRRKLE DP+ P++L+TE+G GYRFE
Sbjct 181 PAYQSETNYLRVYMAQLRRKLEPDPACPRYLITEAGRGYRFE 222
>gi|328885593|emb|CCA58832.1| DNA-binding response regulator KdpE [Streptomyces venezuelae
ATCC 10712]
Length=228
Score = 287 bits (734), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/227 (69%), Positives = 181/227 (80%), Gaps = 2/227 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V A GA ALR AAE PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALVINLKARKYEVDAAPDGATALRLAAERHPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRN- 119
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VEVIKGLRGWTRVPILVLSARQTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 120
Query 120 -TAAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELL 178
AE V+ET+ FTVDLA KKV +DG +V LTPTEW +LE+L RN G+LV + +LL
Sbjct 121 PVGGAEDGVVVVETEGFTVDLAAKKVHRDGRDVRLTPTEWHLLEVLVRNGGRLVSQKQLL 180
Query 179 KEVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
+EVWGP+Y TET+YLRVY+AQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 181 QEVWGPSYGTETNYLRVYMAQLRRKLESDPSHPRHFVTEPGMGYRFE 227
>gi|297153701|gb|ADI03413.1| putative two-component system response regulator [Streptomyces
bingchenggensis BCW-1]
Length=227
Score = 286 bits (732), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 142/226 (63%), Positives = 172/226 (77%), Gaps = 1/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV++D+PQ++RAL INL R Y V A G ALR AA H PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVEDDPQLVRALVINLQARHYDVDAAPDGTTALRLAASHQPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
+DV+ LRGW PV+VLSAR S +KV ALDAGADDY+TKPF MDE LARLRA+VRR
Sbjct 61 VDVIKALRGWTPVPVLVLSARRASEEKVAALDAGADDYMTKPFSMDELLARLRASVRRTE 120
Query 121 AAAEL-EQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
A E +++TD FTVDL KK +DG +VHLTPTEW +LE+L N G+LV + LL+
Sbjct 121 AGPTAPETTLVKTDDFTVDLTAKKAHRDGRDVHLTPTEWHLLEILVTNPGRLVTQRHLLQ 180
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWG + + +T+YLRVY+AQLRRKLE DPSHP++L+TE GMGYRFE
Sbjct 181 EVWGASQSNKTNYLRVYMAQLRRKLEADPSHPRYLITEPGMGYRFE 226
>gi|29828937|ref|NP_823571.1| two-component system response regulator for high-affinity potassium
transport system [Streptomyces avermitilis MA-4680]
gi|29606042|dbj|BAC70106.1| putative two-component system response regulator for high-affinity
potassium transport system [Streptomyces avermitilis MA-4680]
Length=238
Score = 285 bits (730), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/225 (69%), Positives = 179/225 (80%), Gaps = 1/225 (0%)
Query 2 TLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGI 61
T VLV+DDEPQI+RAL INL R Y+V +A GA AL AA PDVV+LDLGLPDM G+
Sbjct 13 TRVLVVDDEPQIVRALVINLKARKYEVDSAHDGATALHVAAARHPDVVVLDLGLPDMDGV 72
Query 62 DVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTA 121
+V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 73 EVIRGLRGWTRVPILVLSARHSSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAEP 132
Query 122 AAELEQPVI-ETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
E VI ET+ FTVDLA KKV +DG +V LTPTEW +LE+L RN G+LVG+ +LL+E
Sbjct 133 TGGGEDDVIVETEDFTVDLAAKKVNRDGRDVRLTPTEWHLLEVLVRNTGRLVGQKQLLQE 192
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGP+Y TET+YLRVY+AQLRRKLE DPSHPKH +TE GMGYRFE
Sbjct 193 VWGPSYGTETNYLRVYMAQLRRKLESDPSHPKHFITEPGMGYRFE 237
>gi|325001104|ref|ZP_08122216.1| two component transcriptional regulator, winged helix family
protein [Pseudonocardia sp. P1]
Length=231
Score = 284 bits (727), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/225 (70%), Positives = 178/225 (80%), Gaps = 1/225 (0%)
Query 2 TLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGI 61
T VLV+DD+PQILRALRINL GY V+ A GA ALR AA+ PDVV+LDLGLPD+ G
Sbjct 6 TTVLVVDDDPQILRALRINLAAHGYAVLLAEDGAAALRRAADGHPDVVVLDLGLPDLHGS 65
Query 62 DVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTA 121
+V+ G+RGW P+IVLSAR DS DKV+ALDAGADDYVTKPFGM E LARLRAAVRR
Sbjct 66 EVIEGIRGWSAVPIIVLSARGDSGDKVRALDAGADDYVTKPFGMAELLARLRAAVRRAAV 125
Query 122 AAELEQPVIETDSFTVDLAGKKVIKD-GAEVHLTPTEWGMLEMLARNRGKLVGRGELLKE 180
+ VI TD+FTVDLA K V+ G +VHLTPTEWG+LE+L RNRGKLV R LL E
Sbjct 126 TTVDGEAVIRTDAFTVDLAAKTVVDSGGGDVHLTPTEWGILEVLVRNRGKLVDRRRLLHE 185
Query 181 VWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
VWGP+Y TETHYLRVYLAQLRRKLE PS P++L+TE+GMGYRFE
Sbjct 186 VWGPSYDTETHYLRVYLAQLRRKLEPVPSAPRYLITEAGMGYRFE 230
>gi|163839669|ref|YP_001624074.1| two-component response regulator [Renibacterium salmoninarum
ATCC 33209]
gi|162953145|gb|ABY22660.1| two-component response regulator [Renibacterium salmoninarum
ATCC 33209]
Length=227
Score = 284 bits (726), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/228 (61%), Positives = 171/228 (75%), Gaps = 5/228 (2%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQILRAL+INL GY V T++ G AL +AA HPPDVV+LD GLPD+ G
Sbjct 1 MTTVLVVDDEPQILRALQINLHAHGYTVHTSANGTDALASAAAHPPDVVVLDFGLPDIDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEF---LARLRAAVR 117
++V+ GLRGW P+IVLSAR S +KV ALDAGADDYVTKPFG+DEF L +
Sbjct 61 LEVIAGLRGWTAVPIIVLSARHASEEKVAALDAGADDYVTKPFGLDEFLARLRAAQRRAE 120
Query 118 RNTAAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGEL 177
++T A P + T+ F VDL KKV++ G V LTPTEW +LE+LARN G+LV + +L
Sbjct 121 QDTDAG--ASPTVATEDFVVDLQAKKVLRAGQRVRLTPTEWSILELLARNSGRLVSQQQL 178
Query 178 LKEVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
L +VWGPAYA ET YLRVY+ QLRRKLE DP++P+HL+ E+GMGYRFE
Sbjct 179 LTQVWGPAYAKETQYLRVYMGQLRRKLEPDPANPRHLIAEAGMGYRFE 226
>gi|326443958|ref|ZP_08218692.1| putative two-component system response regulator [Streptomyces
clavuligerus ATCC 27064]
Length=229
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/227 (67%), Positives = 181/227 (80%), Gaps = 2/227 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G
Sbjct 1 MTRVLVVDDEPQIVRALVINLKARKYEVDAAPDGATALQLAAARHPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRN- 119
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VEVIKGLRGWTRVPILVLSARHTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 120
Query 120 -TAAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELL 178
+ + ++ET+SFTVDLA KKV +DG +V LTPTEW +LE+L RN G+LV + +LL
Sbjct 121 PVGGGDDDVVIVETESFTVDLAAKKVNRDGRDVRLTPTEWHLLEVLVRNTGRLVSQKQLL 180
Query 179 KEVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
+EVWGP+Y TET+YLRVY+AQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 181 QEVWGPSYGTETNYLRVYMAQLRRKLEADPSHPRHFITEPGMGYRFE 227
>gi|302541993|ref|ZP_07294335.1| DNA-binding response regulator KdpE [Streptomyces hygroscopicus
ATCC 53653]
gi|302459611|gb|EFL22704.1| DNA-binding response regulator KdpE [Streptomyces himastatinicus
ATCC 53653]
Length=227
Score = 283 bits (724), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 149/226 (66%), Positives = 179/226 (80%), Gaps = 1/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
M VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G
Sbjct 1 MNRVLVVDDEPQIVRALVINLKARKYEVDAAGDGATALKLAATRHPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VEVIKGLRGWTRVPILVLSARQTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 120
Query 121 AAAELEQP-VIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
+ + V+ETD F+VDLA KK +DG +V LTPTEW +LE+L RN G+LV + +LL+
Sbjct 121 PSGPSDAAVVVETDGFSVDLAAKKAHRDGRDVRLTPTEWHLLEVLVRNEGRLVSQKQLLQ 180
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWGP+Y TET+YLRVY+AQLRRKLE+DPSHP+H +TE GMGYRFE
Sbjct 181 EVWGPSYGTETNYLRVYMAQLRRKLENDPSHPRHFITEPGMGYRFE 226
>gi|294815609|ref|ZP_06774252.1| putative two-component system response regulator [Streptomyces
clavuligerus ATCC 27064]
gi|294328208|gb|EFG09851.1| putative two-component system response regulator [Streptomyces
clavuligerus ATCC 27064]
Length=247
Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/227 (63%), Positives = 172/227 (76%), Gaps = 2/227 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
MT VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G
Sbjct 19 MTRVLVVDDEPQIVRALVINLKARKYEVDAAPDGATALQLAAARHPDVVVLDLGLPDMDG 78
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDE--FLARLRAAVRR 118
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE R
Sbjct 79 VEVIKGLRGWTRVPILVLSARHTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 138
Query 119 NTAAAELEQPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELL 178
+ + ++ET+SFTVDLA KKV +DG +V LTPTEW +LE+L RN G+LV + +LL
Sbjct 139 PVGGGDDDVVIVETESFTVDLAAKKVNRDGRDVRLTPTEWHLLEVLVRNTGRLVSQKQLL 198
Query 179 KEVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
+EVWGP+Y TET+YLRVY+AQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 199 QEVWGPSYGTETNYLRVYMAQLRRKLEADPSHPRHFITEPGMGYRFE 245
>gi|337768622|emb|CCB77335.1| KDP operon transcriptional regulatory protein kdpE [Streptomyces
cattleya NRRL 8057]
Length=254
Score = 282 bits (722), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/223 (69%), Positives = 178/223 (80%), Gaps = 1/223 (0%)
Query 4 VLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSGIDV 63
VLV+DDEPQI+RAL INL R Y+V A GA AL+ AA PDVV+LDLGLPDM G +V
Sbjct 31 VLVVDDEPQIVRALVINLRARKYEVDAAPDGATALQLAAARHPDVVVLDLGLPDMDGTEV 90
Query 64 LGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNTAAA 123
+ GLRGW P+IVLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 91 IKGLRGWTRVPIIVLSARQASDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAAPGG 150
Query 124 ELEQPV-IETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLKEVW 182
+ E+ V +ETDSFTVDLA KKV +DG +V LTPTEW +LE+L R G+LV + +LL+EVW
Sbjct 151 DGEEAVTVETDSFTVDLAAKKVNRDGTDVRLTPTEWHLLEVLVRTPGRLVSQKQLLQEVW 210
Query 183 GPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
GPAY TET+YLRVY+AQLRRKLE DP+HP+H +TE GMGYRFE
Sbjct 211 GPAYGTETNYLRVYMAQLRRKLEADPAHPRHFITEPGMGYRFE 253
>gi|297156667|gb|ADI06379.1| putative two-component system response regulator for high-affinity
potassium transport system [Streptomyces bingchenggensis
BCW-1]
Length=227
Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/226 (67%), Positives = 178/226 (79%), Gaps = 1/226 (0%)
Query 1 MTLVLVIDDEPQILRALRINLTVRGYQVITASTGAGALRAAAEHPPDVVILDLGLPDMSG 60
M VLV+DDEPQI+RAL INL R Y+V AS GA ALR AA PDVV+LDLGLPDM G
Sbjct 1 MNRVLVVDDEPQIVRALVINLKARKYEVDAASDGATALRLAATRHPDVVVLDLGLPDMDG 60
Query 61 IDVLGGLRGWLTAPVIVLSARTDSSDKVQALDAGADDYVTKPFGMDEFLARLRAAVRRNT 120
++V+ GLRGW P++VLSAR S +KV+ALDAGADDYVTKPFGMDE LARLRAAVRR
Sbjct 61 VEVIKGLRGWTRVPILVLSARQTSDEKVEALDAGADDYVTKPFGMDELLARLRAAVRRAE 120
Query 121 AAAELE-QPVIETDSFTVDLAGKKVIKDGAEVHLTPTEWGMLEMLARNRGKLVGRGELLK 179
+ V+ET+ FTVDLA KKV + G +V LTPTEW +LE+L RN G+LV + +LL+
Sbjct 121 PVGAADGGAVVETEGFTVDLAAKKVNRGGVDVRLTPTEWHLLEVLVRNTGRLVSQKQLLQ 180
Query 180 EVWGPAYATETHYLRVYLAQLRRKLEDDPSHPKHLLTESGMGYRFE 225
EVWGP+Y TET+YLRVY+AQLRRKLE DPSHP+H +TE GMGYRFE
Sbjct 181 EVWGPSYGTETNYLRVYMAQLRRKLEADPSHPRHFVTEPGMGYRFE 226
Lambda K H
0.319 0.137 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 287912302678
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40