BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1028c Length=860 Score E Sequences producing significant alignments: (Bits) Value gi|308231704|ref|ZP_07413501.2| sensor protein kdpD [Mycobacteri... 1713 0.0 gi|15608168|ref|NP_215544.1| sensor protein KDPD [Mycobacterium ... 1710 0.0 gi|15840458|ref|NP_335495.1| sensor histidine kinase KdpD [Mycob... 1710 0.0 gi|148822237|ref|YP_001286991.1| two component system sensor his... 1707 0.0 gi|31792219|ref|NP_854712.1| sensor protein KDPD [Mycobacterium ... 1707 0.0 gi|340626039|ref|YP_004744491.1| putative sensor protein KDPD [M... 1705 0.0 gi|339631089|ref|YP_004722731.1| sensor protein [Mycobacterium a... 1704 0.0 gi|339294030|gb|AEJ46141.1| sensor histidine kinase KdpD [Mycoba... 1704 0.0 gi|289573668|ref|ZP_06453895.1| sensor protein kdpD [Mycobacteri... 1703 0.0 gi|121636957|ref|YP_977180.1| putative sensor protein kdpD [Myco... 1702 0.0 gi|326904744|gb|EGE51677.1| LOW QUALITY PROTEIN: sensor protein ... 1680 0.0 gi|308398096|ref|ZP_07492673.2| sensor protein kdpD [Mycobacteri... 1673 0.0 gi|308371835|ref|ZP_07426401.2| sensor protein kdpD [Mycobacteri... 1670 0.0 gi|289749560|ref|ZP_06508938.1| LOW QUALITY PROTEIN: sensor prot... 1569 0.0 gi|289753089|ref|ZP_06512467.1| LOW QUALITY PROTEIN: two compone... 1566 0.0 gi|289442449|ref|ZP_06432193.1| sensor protein kdpD [Mycobacteri... 1554 0.0 gi|289569008|ref|ZP_06449235.1| sensor protein kdpD [Mycobacteri... 1545 0.0 gi|183980659|ref|YP_001848950.1| two-component system response p... 1350 0.0 gi|342861632|ref|ZP_08718278.1| hypothetical protein MCOL_22201 ... 1340 0.0 gi|118464374|ref|YP_880418.1| sensor protein KdpD [Mycobacterium... 1328 0.0 gi|336461325|gb|EGO40196.1| osmosensitive K+ channel histidine k... 1327 0.0 gi|254774016|ref|ZP_05215532.1| hypothetical protein MaviaA2_049... 1327 0.0 gi|296169901|ref|ZP_06851513.1| sensor histidine kinase KdpD [My... 1326 0.0 gi|41407094|ref|NP_959930.1| hypothetical protein MAP0996c [Myco... 1324 0.0 gi|254820273|ref|ZP_05225274.1| sensor protein KdpD [Mycobacteri... 1316 0.0 gi|120405712|ref|YP_955541.1| osmosensitive K+ channel signal tr... 1296 0.0 gi|240169879|ref|ZP_04748538.1| sensor protein KdpD [Mycobacteri... 1269 0.0 gi|118473402|ref|YP_889636.1| sensor protein KdpD [Mycobacterium... 1237 0.0 gi|108801193|ref|YP_641390.1| osmosensitive K+ channel signal tr... 1220 0.0 gi|126437172|ref|YP_001072863.1| osmosensitive K+ channel signal... 1218 0.0 gi|325675931|ref|ZP_08155614.1| sensor histidine kinase KdpD [Rh... 1111 0.0 gi|312140453|ref|YP_004007789.1| two component system sensor kin... 1111 0.0 gi|333989634|ref|YP_004522248.1| two-component system response p... 1102 0.0 gi|226360366|ref|YP_002778144.1| turgor pressure sensor kinase K... 1095 0.0 gi|111018239|ref|YP_701211.1| histidine sensor kinase, two-compo... 1087 0.0 gi|229493133|ref|ZP_04386925.1| sensor protein KdpD [Rhodococcus... 1031 0.0 gi|226307210|ref|YP_002767170.1| turgor pressure sensor kinase [... 1000 0.0 gi|169630332|ref|YP_001703981.1| sensor protein KdpD [Mycobacter... 949 0.0 gi|317506418|ref|ZP_07964223.1| osmosensitive K+ channel His kin... 929 0.0 gi|54023537|ref|YP_117779.1| putative two-component system senso... 927 0.0 gi|118469431|ref|YP_889615.1| sensor protein KdpD [Mycobacterium... 912 0.0 gi|262203939|ref|YP_003275147.1| osmosensitive K channel His kin... 907 0.0 gi|343927313|ref|ZP_08766789.1| turgor pressure sensor kinase Kd... 875 0.0 gi|296393294|ref|YP_003658178.1| osmosensitive K channel His kin... 856 0.0 gi|134102523|ref|YP_001108184.1| sensor histidine kinase [Saccha... 827 0.0 gi|302525128|ref|ZP_07277470.1| sensor histidine kinase [Strepto... 818 0.0 gi|291007109|ref|ZP_06565082.1| sensor histidine kinase [Sacchar... 816 0.0 gi|326384128|ref|ZP_08205811.1| Osmosensitive K channel His kina... 803 0.0 gi|337768621|emb|CCB77334.1| Sensor protein kdpD [Streptomyces c... 788 0.0 gi|300783816|ref|YP_003764107.1| two-component system sensor kin... 786 0.0 >gi|308231704|ref|ZP_07413501.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu001] gi|308379941|ref|ZP_07488170.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu011] gi|308216313|gb|EFO75712.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu001] gi|308363106|gb|EFP51957.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu011] Length=871 Score = 1713 bits (4437), Expect = 0.0, Method: Compositional matrix adjust. Identities = 860/860 (100%), Positives = 860/860 (100%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 12 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 71 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 72 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 131 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 132 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 191 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 192 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 251 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 252 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 311 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 312 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 371 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 372 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 431 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 432 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 491 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 492 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 551 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 552 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 611 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 612 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 671 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 672 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 731 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 732 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 791 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 792 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 851 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 852 DTPGGGLTVVIDLAAPEDRP 871 >gi|15608168|ref|NP_215544.1| sensor protein KDPD [Mycobacterium tuberculosis H37Rv] gi|148660810|ref|YP_001282333.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis H37Ra] gi|167968527|ref|ZP_02550804.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis H37Ra] gi|306971271|ref|ZP_07483932.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu010] gi|3122321|sp|P96372.2|KDPD_MYCTU RecName: Full=Sensor protein KdpD gi|1870000|emb|CAB06851.1| PROBABLE SENSOR PROTEIN KDPD [Mycobacterium tuberculosis H37Rv] gi|148504962|gb|ABQ72771.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis H37Ra] gi|308359204|gb|EFP48055.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu010] Length=860 Score = 1710 bits (4429), Expect = 0.0, Method: Compositional matrix adjust. Identities = 859/860 (99%), Positives = 860/860 (100%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|15840458|ref|NP_335495.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis CDC1551] gi|308370581|ref|ZP_07422046.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu003] gi|308373002|ref|ZP_07430714.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu005] gi|308377587|ref|ZP_07479741.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu009] gi|13880630|gb|AAK45309.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis CDC1551] gi|308331506|gb|EFP20357.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu003] gi|308339120|gb|EFP27971.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu005] gi|308355249|gb|EFP44100.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu009] Length=871 Score = 1710 bits (4428), Expect = 0.0, Method: Compositional matrix adjust. Identities = 859/860 (99%), Positives = 859/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 12 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 71 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 72 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 131 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 132 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 191 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 192 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 251 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 252 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 311 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 312 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 371 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 372 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 431 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 432 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 491 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 492 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 551 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 552 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 611 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 612 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 671 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 672 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 731 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 732 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 791 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 792 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 851 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 852 DTPGGGLTVVIDLAAPEDRP 871 >gi|148822237|ref|YP_001286991.1| two component system sensor histidine kinase kdpD [Mycobacterium tuberculosis F11] gi|253799942|ref|YP_003032943.1| two component system sensor protein kdpD [Mycobacterium tuberculosis KZN 1435] gi|254231319|ref|ZP_04924646.1| sensor protein kdpD [Mycobacterium tuberculosis C] 26 more sequence titles Length=860 Score = 1707 bits (4421), Expect = 0.0, Method: Compositional matrix adjust. Identities = 858/860 (99%), Positives = 859/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|31792219|ref|NP_854712.1| sensor protein KDPD [Mycobacterium bovis AF2122/97] gi|31617807|emb|CAD93916.1| PROBABLE SENSOR PROTEIN KDPD [Mycobacterium bovis AF2122/97] Length=860 Score = 1707 bits (4420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/860 (99%), Positives = 858/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGD LAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDDLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|340626039|ref|YP_004744491.1| putative sensor protein KDPD [Mycobacterium canettii CIPT 140010059] gi|340004229|emb|CCC43369.1| putative sensor protein KDPD [Mycobacterium canettii CIPT 140010059] Length=860 Score = 1705 bits (4416), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/860 (99%), Positives = 858/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAF PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFPPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|339631089|ref|YP_004722731.1| sensor protein [Mycobacterium africanum GM041182] gi|339330445|emb|CCC26110.1| putative sensor protein KDPD [Mycobacterium africanum GM041182] Length=860 Score = 1704 bits (4414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 856/860 (99%), Positives = 857/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGD LAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDDLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEE VQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEETVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|339294030|gb|AEJ46141.1| sensor histidine kinase KdpD [Mycobacterium tuberculosis CCDC5079] Length=860 Score = 1704 bits (4414), Expect = 0.0, Method: Compositional matrix adjust. Identities = 857/860 (99%), Positives = 858/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPK WQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKLWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|289573668|ref|ZP_06453895.1| sensor protein kdpD [Mycobacterium tuberculosis K85] gi|289538099|gb|EFD42677.1| sensor protein kdpD [Mycobacterium tuberculosis K85] Length=860 Score = 1703 bits (4411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 855/860 (99%), Positives = 857/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGD LAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDDLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEE VQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEETVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIG+GATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGQGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|121636957|ref|YP_977180.1| putative sensor protein kdpD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989429|ref|YP_002644116.1| putative sensor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492604|emb|CAL71072.1| Probable sensor protein kdpD [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772542|dbj|BAH25348.1| putative sensor protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600973|emb|CCC63644.1| probable sensor protein kdpD [Mycobacterium bovis BCG str. Moreau RDJ] Length=860 Score = 1702 bits (4407), Expect = 0.0, Method: Compositional matrix adjust. Identities = 855/860 (99%), Positives = 857/860 (99%), Gaps = 0/860 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMI PRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMISPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGD LAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDDLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRV+AGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVDAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLTVVIDLAAPEDRP 860 DTPGGGLTVVIDLAAPEDRP Sbjct 841 DTPGGGLTVVIDLAAPEDRP 860 >gi|326904744|gb|EGE51677.1| LOW QUALITY PROTEIN: sensor protein kdpD [Mycobacterium tuberculosis W-148] Length=860 Score = 1680 bits (4350), Expect = 0.0, Method: Compositional matrix adjust. Identities = 844/848 (99%), Positives = 846/848 (99%), Gaps = 0/848 (0%) Query 1 VTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 +TLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV Sbjct 1 MTLLFADLCAIFTPYRWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVV 60 Query 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT Sbjct 61 AAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNT 120 Query 121 PGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 PGSKNPK WQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ Sbjct 121 PGSKNPKLWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQ 180 Query 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK Sbjct 181 VELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEK 240 Query 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS Sbjct 241 YRADKKITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVS 300 Query 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI Sbjct 301 APQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGI 360 Query 361 GARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 GARTVQE GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR Sbjct 361 GARTVQESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDR 420 Query 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE Sbjct 421 FMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTE 480 Query 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ Sbjct 481 FVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQ 540 Query 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL Sbjct 541 RAVTMLRVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVL 600 Query 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT Sbjct 601 TAVATQAAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRT 660 Query 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV Sbjct 661 EDVAFSPEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALV 720 Query 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV Sbjct 721 SIGKGATGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRV 780 Query 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT Sbjct 781 RERVLINVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISAT 840 Query 841 DTPGGGLT 848 DTPGGGL+ Sbjct 841 DTPGGGLS 848 >gi|308398096|ref|ZP_07492673.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu012] gi|308366770|gb|EFP55621.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu012] Length=843 Score = 1673 bits (4332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 843/843 (100%), Positives = 843/843 (100%), Gaps = 0/843 (0%) Query 18 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE 77 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE Sbjct 1 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE 60 Query 78 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD 137 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD Sbjct 61 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD 120 Query 138 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH 197 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH Sbjct 121 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH 180 Query 198 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV 257 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV Sbjct 181 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV 240 Query 258 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT 317 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT Sbjct 241 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT 300 Query 318 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVT 377 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVT Sbjct 301 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVT 360 Query 378 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI 437 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI Sbjct 361 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI 420 Query 438 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA 497 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA Sbjct 421 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA 480 Query 498 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET 557 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET Sbjct 481 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET 540 Query 558 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA Sbjct 541 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 600 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI Sbjct 601 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 660 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV Sbjct 661 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 720 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR Sbjct 721 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 780 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE Sbjct 781 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 840 Query 858 DRP 860 DRP Sbjct 841 DRP 843 >gi|308371835|ref|ZP_07426401.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu004] gi|308374173|ref|ZP_07435117.2| sensor protein kdpD [Mycobacterium tuberculosis SUMu006] gi|308335312|gb|EFP24163.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu004] gi|308342792|gb|EFP31643.1| sensor protein kdpD [Mycobacterium tuberculosis SUMu006] Length=843 Score = 1670 bits (4325), Expect = 0.0, Method: Compositional matrix adjust. Identities = 842/843 (99%), Positives = 842/843 (99%), Gaps = 0/843 (0%) Query 18 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE 77 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE Sbjct 1 MIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLE 60 Query 78 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD 137 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD Sbjct 61 GIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILD 120 Query 138 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH 197 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH Sbjct 121 AGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAH 180 Query 198 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV 257 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV Sbjct 181 GNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERV 240 Query 258 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT 317 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT Sbjct 241 VVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGAT 300 Query 318 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVT 377 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQE GGIDVHMVT Sbjct 301 MHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQESGGIDVHMVT 360 Query 378 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI 437 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI Sbjct 361 HPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLI 420 Query 438 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA 497 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA Sbjct 421 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA 480 Query 498 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET 557 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET Sbjct 481 ASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGET 540 Query 558 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA Sbjct 541 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 600 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI Sbjct 601 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 660 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV Sbjct 661 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 720 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR Sbjct 721 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 780 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE Sbjct 781 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 840 Query 858 DRP 860 DRP Sbjct 841 DRP 843 >gi|289749560|ref|ZP_06508938.1| LOW QUALITY PROTEIN: sensor protein kdpD [Mycobacterium tuberculosis T92] gi|289690147|gb|EFD57576.1| LOW QUALITY PROTEIN: sensor protein kdpD [Mycobacterium tuberculosis T92] Length=837 Score = 1569 bits (4062), Expect = 0.0, Method: Compositional matrix adjust. Identities = 793/794 (99%), Positives = 793/794 (99%), Gaps = 0/794 (0%) Query 67 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP 126 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP Sbjct 44 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP 103 Query 127 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI 186 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI Sbjct 104 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI 163 Query 187 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK 246 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK Sbjct 164 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK 223 Query 247 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR 306 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR Sbjct 224 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR 283 Query 307 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ 366 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ Sbjct 284 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ 343 Query 367 EPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG 426 E GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG Sbjct 344 ESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG 403 Query 427 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM 486 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM Sbjct 404 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM 463 Query 487 AVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML 546 AVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML Sbjct 464 AVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML 523 Query 547 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ 606 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ Sbjct 524 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ 583 Query 607 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS 666 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS Sbjct 584 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS 643 Query 667 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA 726 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA Sbjct 644 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA 703 Query 727 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI 786 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI Sbjct 704 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI 763 Query 787 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG 846 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG Sbjct 764 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG 823 Query 847 LTVVIDLAAPEDRP 860 LTVVIDLAAPEDRP Sbjct 824 LTVVIDLAAPEDRP 837 >gi|289753089|ref|ZP_06512467.1| LOW QUALITY PROTEIN: two component system sensor histidine kinase kdpD [Mycobacterium tuberculosis EAS054] gi|289693676|gb|EFD61105.1| LOW QUALITY PROTEIN: two component system sensor histidine kinase kdpD [Mycobacterium tuberculosis EAS054] Length=837 Score = 1566 bits (4055), Expect = 0.0, Method: Compositional matrix adjust. Identities = 792/794 (99%), Positives = 792/794 (99%), Gaps = 0/794 (0%) Query 67 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP 126 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP Sbjct 44 HGRNKTAKLLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNP 103 Query 127 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI 186 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI Sbjct 104 KRWQDVQEILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDI 163 Query 187 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK 246 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK Sbjct 164 TPEALRRRLAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKK 223 Query 247 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR 306 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR Sbjct 224 ITATWEARERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGR 283 Query 307 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ 366 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ Sbjct 284 VRELATSLGATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQ 343 Query 367 EPGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG 426 E GGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG Sbjct 344 ESGGIDVHMVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGG 403 Query 427 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM 486 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM Sbjct 404 ESALFFIGVLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAM 463 Query 487 AVAVAVLVDGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML 546 AVAVAVLVDGAASRTREAR ASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML Sbjct 464 AVAVAVLVDGAASRTREARHASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML 523 Query 547 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ 606 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ Sbjct 524 RVRQGASTGETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQ 583 Query 607 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS 666 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS Sbjct 584 AAGLVKQRELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFS 643 Query 667 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA 726 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA Sbjct 644 PEDTAELLATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGA 703 Query 727 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI 786 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI Sbjct 704 TGFYRSGIDRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLI 763 Query 787 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG 846 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG Sbjct 764 NVIDEGPGVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGG 823 Query 847 LTVVIDLAAPEDRP 860 LTVVIDLAAPEDRP Sbjct 824 LTVVIDLAAPEDRP 837 >gi|289442449|ref|ZP_06432193.1| sensor protein kdpD [Mycobacterium tuberculosis T46] gi|289415368|gb|EFD12608.1| sensor protein kdpD [Mycobacterium tuberculosis T46] Length=786 Score = 1554 bits (4023), Expect = 0.0, Method: Compositional matrix adjust. Identities = 784/786 (99%), Positives = 785/786 (99%), Gaps = 0/786 (0%) Query 75 LLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQE 134 +LEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQE Sbjct 1 MLEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQE 60 Query 135 ILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRR 194 ILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRR Sbjct 61 ILDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRR 120 Query 195 LAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEAR 254 LAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEAR Sbjct 121 LAHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEAR 180 Query 255 ERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSL 314 ERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSL Sbjct 181 ERVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSL 240 Query 315 GATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVH 374 GATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQE GGIDVH Sbjct 241 GATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQESGGIDVH 300 Query 375 MVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIG 434 MVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIG Sbjct 301 MVTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIG 360 Query 435 VLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLV 494 VLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLV Sbjct 361 VLIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLV 420 Query 495 DGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGAST 554 DGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGAST Sbjct 421 DGAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGAST 480 Query 555 GETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQR 614 GETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQR Sbjct 481 GETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQR 540 Query 615 ELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELL 674 ELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELL Sbjct 541 ELAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELL 600 Query 675 ATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGI 734 ATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGI Sbjct 601 ATIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGI 660 Query 735 DRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPG 794 DRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPG Sbjct 661 DRVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPG 720 Query 795 VPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854 VPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA Sbjct 721 VPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 780 Query 855 APEDRP 860 APEDRP Sbjct 781 APEDRP 786 >gi|289569008|ref|ZP_06449235.1| sensor protein kdpD [Mycobacterium tuberculosis T17] gi|289542762|gb|EFD46410.1| sensor protein kdpD [Mycobacterium tuberculosis T17] Length=780 Score = 1545 bits (4000), Expect = 0.0, Method: Compositional matrix adjust. Identities = 779/780 (99%), Positives = 779/780 (99%), Gaps = 0/780 (0%) Query 81 MIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGI 140 MIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGI Sbjct 1 MIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGI 60 Query 141 TVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNV 200 TVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNV Sbjct 61 TVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNV 120 Query 201 YAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVA 260 YAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVA Sbjct 121 YAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVA 180 Query 261 VTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHT 320 VTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHT Sbjct 181 VTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHT 240 Query 321 VVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPA 380 VVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQE GGIDVHMVTHPA Sbjct 241 VVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQESGGIDVHMVTHPA 300 Query 381 ASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVAL 440 ASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVAL Sbjct 301 ASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVAL 360 Query 441 LGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASR 500 LGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASR Sbjct 361 LGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASR 420 Query 501 TREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVAC 560 TREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVAC Sbjct 421 TREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVAC 480 Query 561 VGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEA 620 VGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEA Sbjct 481 VGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEA 540 Query 621 GQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEES 680 GQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEES Sbjct 541 GQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEES 600 Query 681 IDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVD 740 IDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVD Sbjct 601 IDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVD 660 Query 741 VGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTE 800 VGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTE Sbjct 661 VGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTE 720 Query 801 EQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPEDRP 860 EQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPEDRP Sbjct 721 EQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPEDRP 780 >gi|183980659|ref|YP_001848950.1| two-component system response phosphate sensor kinase, KdpD [Mycobacterium marinum M] gi|183173985|gb|ACC39095.1| two-component system response phosphate sensor kinase, KdpD [Mycobacterium marinum M] Length=839 Score = 1350 bits (3494), Expect = 0.0, Method: Compositional matrix adjust. Identities = 685/831 (83%), Positives = 760/831 (92%), Gaps = 0/831 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKT+AMLGEA RRLERGTDVVAAVVETHGR +TA+LLEGIE IPP Sbjct 8 KRGELRIYLGAAPGVGKTFAMLGEAQRRLERGTDVVAAVVETHGRKRTAELLEGIERIPP 67 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 +++EYRG+RF ELDVEAVLRR PQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 68 KFIEYRGSRFAELDVEAVLRRQPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 127 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQ+EK+PDEIVRAA+QVELVDITPEALRRRLAHGNVYAAE Sbjct 128 TVNVQHLESLNDVVAQITGIEQQEKVPDEIVRAAEQVELVDITPEALRRRLAHGNVYAAE 187 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 RVDAAL+NYFRTGNLTALRE+ALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG Sbjct 188 RVDAALANYFRTGNLTALRELALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 247 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRA RIASK+SAELMVVH+ RGDGL+GV+APQ+G+VRELA SLGAT+HTVVGD Sbjct 248 PESETLVRRAFRIASKASAELMVVHLARGDGLSGVAAPQMGKVRELAASLGATVHTVVGD 307 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPTALLDFAREMNATQLV+GTSRRSRWAR+ DEGIGA VQ+ G IDVHMVTH A R Sbjct 308 DVPTALLDFAREMNATQLVLGTSRRSRWARVLDEGIGATVVQQSGPIDVHMVTHQEAGRP 367 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 + WS + PRE H+ SWLAA+VVPS+ICA+TVAWLDRF+ +GGESALF IGVL+VALLGGV Sbjct 368 ARWSWLWPREHHLVSWLAAVVVPSLICALTVAWLDRFLAVGGESALFVIGVLVVALLGGV 427 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNYFL EPRYT+TIA+PD AVT VLL +AVAVA LVD AA R+REA Sbjct 428 APAALSAVLSGLLLNYFLIEPRYTFTIADPDNAVTTLVLLVVAVAVAALVDNAAKRSREA 487 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 RAS+EAELLALFAGSVLRGADL LL++VRETYSQRAV++LR+ G S G V+CVG + Sbjct 488 GRASREAELLALFAGSVLRGADLEALLEKVRETYSQRAVSILRIEAGTSQGAIVSCVGED 547 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 PC DVD+ADTAI+VGDDEFWMLMAGRKL ARDRRVLTAVA QAAGL+KQRELA+EAG+A+ Sbjct 548 PCVDVDTADTAIDVGDDEFWMLMAGRKLLARDRRVLTAVAKQAAGLIKQRELADEAGKAQ 607 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 AI +AD+LRR+LLSAVSHDLRTPLAAAK AVSSLR++DV FS +D ELLATIEES+DQL Sbjct 608 AIEQADQLRRALLSAVSHDLRTPLAAAKAAVSSLRSDDVDFSADDMGELLATIEESVDQL 667 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 TALV NLLDSSRLAAGV+RPQLRR YLEE VQRAL+ I +GATG+ RSG+DRVKV+VG A Sbjct 668 TALVGNLLDSSRLAAGVVRPQLRRVYLEETVQRALLGISRGATGYGRSGLDRVKVEVGGA 727 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 VA+ADAGLLERVLANLIDN LRYAPD VRV AGRV +RVLINV DEGPG+PRG EEQ+F Sbjct 728 VAIADAGLLERVLANLIDNGLRYAPDSPVRVYAGRVGDRVLINVADEGPGIPRGAEEQMF 787 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAA 855 APFQR GD DN GVGLG+SVA+GFVEAMGGTISATDTPGGGLTVV+DLAA Sbjct 788 APFQRLGDRDNRIGVGLGLSVAKGFVEAMGGTISATDTPGGGLTVVVDLAA 838 >gi|342861632|ref|ZP_08718278.1| hypothetical protein MCOL_22201 [Mycobacterium colombiense CECT 3035] gi|342130766|gb|EGT84062.1| hypothetical protein MCOL_22201 [Mycobacterium colombiense CECT 3035] Length=857 Score = 1340 bits (3467), Expect = 0.0, Method: Compositional matrix adjust. Identities = 682/838 (82%), Positives = 752/838 (90%), Gaps = 5/838 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTY+MLGEAHRRLERGTD+VA VVETHGR+KTA+LLEGIE+IPP Sbjct 16 KRGELRIYLGAAPGVGKTYSMLGEAHRRLERGTDLVAGVVETHGRSKTAELLEGIEVIPP 75 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R VEYRG+ FPELDV AVL R PQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 76 RQVEYRGSSFPELDVPAVLARRPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 135 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE IPD IVR A QVEL+DITPEALRRRL+HGNVYA + Sbjct 136 TVNVQHLESLNDVVAQITGIEQKETIPDLIVRQAAQVELIDITPEALRRRLSHGNVYAPD 195 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ KIT WEARERVVVAVTGG Sbjct 196 RIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENKITDMWEARERVVVAVTGG 255 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKS+AELMVVHVIRGDGLAG+S ++ ++RELA SL A++HTVVGD Sbjct 256 PESETLVRRASRIASKSTAELMVVHVIRGDGLAGLSESRMAKIRELANSLDASIHTVVGD 315 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 +VPTALL+FAREMNATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH A R Sbjct 316 EVPTALLEFAREMNATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEEAKRG 375 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S ++PRER +ASWLAALVVPSVICAITV LD ++ GGESA+FFIGVL+V L GG+ Sbjct 376 FRLSSLAPRERRVASWLAALVVPSVICAITVTTLDPYLDTGGESAVFFIGVLLVGLFGGI 435 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNYFL PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREA Sbjct 436 APAALSAVLSGLLLNYFLIAPRHSFTIAEPNSAITELVLLLVAVAVAVLVDFAAKRTREA 495 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR-----VRQGASTGETVA 559 RRASQEAELL LFAGSVLRGADL TLL+RVRETY+QR VTMLR R G + G+ VA Sbjct 496 RRASQEAELLTLFAGSVLRGADLETLLERVRETYAQRTVTMLREPGEEARAGGAKGDVVA 555 Query 560 CVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEE 619 CVG +PC +VDSADTAIEVGDDEFWML+AGRKL+ARDRRVL+AVA QAAGL++QRELAEE Sbjct 556 CVGRDPCVNVDSADTAIEVGDDEFWMLLAGRKLSARDRRVLSAVARQAAGLIRQRELAEE 615 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A +AEAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSP DTAELLATIEE Sbjct 616 ASRAEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPADTAELLATIEE 675 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 SIDQLTALV NLLDSSRLAAGVI P LRR YLEEAVQRALVSIGKGATGF+RS IDRVKV Sbjct 676 SIDQLTALVGNLLDSSRLAAGVIHPDLRRVYLEEAVQRALVSIGKGATGFFRSAIDRVKV 735 Query 740 DVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGT 799 DV DA+ MADAGLLERVLANLIDNALRYAP+CVVRVNAGRV +RVLINVIDEGPG+P G Sbjct 736 DVADAMVMADAGLLERVLANLIDNALRYAPNCVVRVNAGRVGDRVLINVIDEGPGIPHGA 795 Query 800 EEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 EEQ+F FQR GD DNT GVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++D+AAP+ Sbjct 796 EEQIFEAFQRLGDQDNTIGVGLGMSVARGFVEAMGGTITATDTPGGGLTVIVDMAAPQ 853 >gi|118464374|ref|YP_880418.1| sensor protein KdpD [Mycobacterium avium 104] gi|118165661|gb|ABK66558.1| sensor protein KdpD [Mycobacterium avium 104] Length=854 Score = 1328 bits (3437), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/840 (81%), Positives = 753/840 (90%), Gaps = 7/840 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTY+MLGEAHRRLERGTD+VA VVETHGR KTA+LLEGIE+IPP Sbjct 10 KRGELRIYLGAAPGVGKTYSMLGEAHRRLERGTDLVAGVVETHGRAKTAELLEGIEIIPP 69 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 RY+EYRG RFPELDV AVL RHPQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 70 RYIEYRGGRFPELDVPAVLARHPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 129 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE +PD +VR A QVEL+DITPEALRRRL+HGNVYA + Sbjct 130 TVNVQHLESLNDVVAQITGIEQKETVPDSVVRQASQVELIDITPEALRRRLSHGNVYAPD 189 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ KIT TWEARERVVVAVTGG Sbjct 190 RIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENKITDTWEARERVVVAVTGG 249 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA+SL A++HT+VGD Sbjct 250 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSESRMAKIRELASSLDASLHTIVGD 309 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 +VP ALL+FAREMNATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH + R Sbjct 310 EVPAALLEFAREMNATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEESKRG 369 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S ++PRER +ASWLAAL+VPSVICA+TV WLD ++ GGESALFF+GVL+V LLGG+ Sbjct 370 FRASSLAPRERRVASWLAALIVPSVICAVTVTWLDPYLDTGGESALFFVGVLLVGLLGGI 429 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNY+L PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREA Sbjct 430 APAALSAVLSGLLLNYYLIAPRHSFTIAEPNSAITELVLLLIAVAVAVLVDFAAKRTREA 489 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR----VRQGASTGETVAC 560 RRASQEAELL LFAGSVLRGADL TLL+RVRETY+QR+V+MLR R G + + VAC Sbjct 490 RRASQEAELLTLFAGSVLRGADLETLLERVRETYAQRSVSMLRESEDARAGGTKTQVVAC 549 Query 561 VGTNPCRDVDSADTAIEVG---DDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VG +PC VD+ADTAIEVG EF ML+AGRKL+ARDRRVL+AVA QAAGL++QRELA Sbjct 550 VGRDPCVSVDAADTAIEVGGPDSSEFQMLLAGRKLSARDRRVLSAVARQAAGLIRQRELA 609 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEA + EAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSP DTAELLATI Sbjct 610 EEASRTEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPTDTAELLATI 669 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALV NLLDSSRLAAG I P LRR YLEEAVQRALVSIGKGATGF+RS IDRV Sbjct 670 EESIDQLTALVGNLLDSSRLAAGAIHPDLRRVYLEEAVQRALVSIGKGATGFFRSAIDRV 729 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDA+ MADAGLLERVLANLIDNALRYAP+CVVRVNAG+V +RVLINVIDEGPG+P Sbjct 730 KVDVGDAMVMADAGLLERVLANLIDNALRYAPNCVVRVNAGQVGDRVLINVIDEGPGIPH 789 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 G EEQ+F FQR GDHDNTTGVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++D+AAP+ Sbjct 790 GAEEQIFEAFQRLGDHDNTTGVGLGMSVARGFVEAMGGTITATDTPGGGLTVMVDMAAPQ 849 >gi|336461325|gb|EGO40196.1| osmosensitive K+ channel histidine kinase [Mycobacterium avium subsp. paratuberculosis S397] Length=857 Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/840 (81%), Positives = 753/840 (90%), Gaps = 7/840 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTY+MLGEAHRRLERGTD+VA VVETHGR KTA+LLEGIE+IPP Sbjct 13 KRGELRIYLGAAPGVGKTYSMLGEAHRRLERGTDLVAGVVETHGRAKTAELLEGIEIIPP 72 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 RY+EYRG RFPELDV AVL RHPQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 73 RYIEYRGGRFPELDVPAVLARHPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 132 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE +PD +VR A QVEL+DITPEALRRRL+HGNVYA + Sbjct 133 TVNVQHLESLNDVVAQITGIEQKETVPDSVVRQASQVELIDITPEALRRRLSHGNVYAPD 192 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ KIT TWEARERVVVAVTGG Sbjct 193 RIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENKITDTWEARERVVVAVTGG 252 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA+SL A++HT+VGD Sbjct 253 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSESRMAKIRELASSLDASLHTIVGD 312 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 +VP ALL+FAREMNATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH + R Sbjct 313 EVPAALLEFAREMNATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEESKRG 372 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S ++PRER +ASWLAAL+VPSVICA+TV WLD ++ GGESALFF+GVL+V LLGG+ Sbjct 373 FRASSLAPRERRVASWLAALIVPSVICAVTVTWLDPYLDTGGESALFFVGVLLVGLLGGI 432 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNY+L PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREA Sbjct 433 APAALSAVLSGLLLNYYLIAPRHSFTIAEPNSAITELVLLLIAVAVAVLVDFAAKRTREA 492 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR----VRQGASTGETVAC 560 RRASQEAELL LFAGSVLRGADL TLL+RVRETY+QR+V+MLR R G + + VAC Sbjct 493 RRASQEAELLTLFAGSVLRGADLETLLERVRETYAQRSVSMLRESEDARAGGTKTQVVAC 552 Query 561 VGTNPCRDVDSADTAIEVG---DDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VG +PC VD+ADTAIEVG EF ML+AGRKL+ARDRRVL+AVA QAAGL++QRELA Sbjct 553 VGRDPCVSVDAADTAIEVGGPDSSEFQMLLAGRKLSARDRRVLSAVARQAAGLIRQRELA 612 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEA + EAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSP DTAELLATI Sbjct 613 EEASRTEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPTDTAELLATI 672 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALV NLLDSSRLAAG I P LRR YLEEAVQRALVSIGKGATGF+RS IDRV Sbjct 673 EESIDQLTALVGNLLDSSRLAAGAIHPDLRRVYLEEAVQRALVSIGKGATGFFRSAIDRV 732 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDA+ MADAGLLERVLANLIDNALRYAP+CVVRVNAG+V +RVLINVIDEGPG+P Sbjct 733 KVDVGDAMVMADAGLLERVLANLIDNALRYAPNCVVRVNAGQVGDRVLINVIDEGPGIPH 792 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 G EEQ+F FQR GDHDNTTGVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++D+AAP+ Sbjct 793 GAEEQIFEAFQRLGDHDNTTGVGLGMSVARGFVEAMGGTITATDTPGGGLTVMVDMAAPQ 852 >gi|254774016|ref|ZP_05215532.1| hypothetical protein MaviaA2_04979 [Mycobacterium avium subsp. avium ATCC 25291] Length=858 Score = 1327 bits (3434), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/840 (81%), Positives = 753/840 (90%), Gaps = 7/840 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTY+MLGEAHRRLERGTD+VA VVETHGR KTA+LLEGIE+IPP Sbjct 14 KRGELRIYLGAAPGVGKTYSMLGEAHRRLERGTDLVAGVVETHGRAKTAELLEGIEIIPP 73 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 RY+EYRG RFPELDV AVL RHPQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 74 RYIEYRGGRFPELDVPAVLARHPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 133 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE +PD +VR A QVEL+DITPEALRRRL+HGNVYA + Sbjct 134 TVNVQHLESLNDVVAQITGIEQKETVPDSVVRQASQVELIDITPEALRRRLSHGNVYAPD 193 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ KIT TWEARERVVVAVTGG Sbjct 194 RIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENKITDTWEARERVVVAVTGG 253 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA+SL A++HT+VGD Sbjct 254 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSESRMAKIRELASSLDASLHTIVGD 313 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 +VP ALL+FAREMNATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH + R Sbjct 314 EVPAALLEFAREMNATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEESKRG 373 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S ++PRER +ASWLAAL+VPSVICA+TV WLD ++ GGESALFF+GVL+V LLGG+ Sbjct 374 FRASSLAPRERRVASWLAALIVPSVICAVTVTWLDPYLDTGGESALFFVGVLLVGLLGGI 433 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNY+L PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREA Sbjct 434 APAALSAVLSGLLLNYYLIAPRHSFTIAEPNSAITELVLLLIAVAVAVLVDFAAKRTREA 493 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR----VRQGASTGETVAC 560 RRASQEAELL LFAGSVLRGADL TLL+RVRETY+QR+V+MLR R G + + VAC Sbjct 494 RRASQEAELLTLFAGSVLRGADLETLLERVRETYAQRSVSMLRESEDARAGGTKTQVVAC 553 Query 561 VGTNPCRDVDSADTAIEVG---DDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VG +PC VD+ADTAIEVG EF ML+AGRKL+ARDRRVL+AVA QAAGL++QRELA Sbjct 554 VGRDPCVSVDAADTAIEVGGPDSSEFQMLLAGRKLSARDRRVLSAVARQAAGLIRQRELA 613 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEA + EAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSP DTAELLATI Sbjct 614 EEASRTEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPTDTAELLATI 673 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALV NLLDSSRLAAG I P LRR YLEEAVQRALVSIGKGATGF+RS IDRV Sbjct 674 EESIDQLTALVGNLLDSSRLAAGAIHPDLRRVYLEEAVQRALVSIGKGATGFFRSAIDRV 733 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDA+ MADAGLLERVLANLIDNALRYAP+CVVRVNAG+V +RVLINVIDEGPG+P Sbjct 734 KVDVGDAMVMADAGLLERVLANLIDNALRYAPNCVVRVNAGQVGDRVLINVIDEGPGIPH 793 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 G EEQ+F FQR GDHDNTTGVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++D+AAP+ Sbjct 794 GAEEQIFEAFQRLGDHDNTTGVGLGMSVARGFVEAMGGTITATDTPGGGLTVMVDMAAPQ 853 >gi|296169901|ref|ZP_06851513.1| sensor histidine kinase KdpD [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895457|gb|EFG75159.1| sensor histidine kinase KdpD [Mycobacterium parascrofulaceum ATCC BAA-614] Length=855 Score = 1326 bits (3433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 675/837 (81%), Positives = 742/837 (89%), Gaps = 5/837 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLG+APGVGKTYAMLGEAHRRLERGTD+VA V+ETHGR KTA+LLEGIE +PP Sbjct 13 KRGELRIYLGSAPGVGKTYAMLGEAHRRLERGTDLVAGVIETHGRAKTAELLEGIEFVPP 72 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 RY+EYRG FPELDV AVL R PQVVLVDELAHTNTPGSKN KRWQDV+E+LDAGITVIS Sbjct 73 RYIEYRGGSFPELDVPAVLARKPQVVLVDELAHTNTPGSKNAKRWQDVEELLDAGITVIS 132 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE IPD IVR A QVEL+DITPEALRRRL+HGNVYA E Sbjct 133 TVNVQHLESLNDVVAQITGIEQKETIPDSIVRQASQVELIDITPEALRRRLSHGNVYAPE 192 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ KIT TWEARERVVVAVTGG Sbjct 193 RIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENKITETWEARERVVVAVTGG 252 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA+SL A++HTVVGD Sbjct 253 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSEARMAKIRELASSLDASLHTVVGD 312 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPTALLDFAREMNATQLV+GTSRRSRWARLF+EGIGAR V+ G IDVH+VTH + R Sbjct 313 DVPTALLDFAREMNATQLVIGTSRRSRWARLFEEGIGARIVERSGKIDVHLVTHEESKRG 372 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 + ++P ER +ASWLAA +VPS ICA+ V LD ++G G+SALFF+GVL+V LLGGV Sbjct 373 FRAASLAPDERRVASWLAAFLVPSAICAVIVTALDPYLGTSGDSALFFVGVLLVGLLGGV 432 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APA +SA+LS +LLNYFLT PR+T+TIAEPDAAVTE VLL +AVAVA+LVDGA RTREA Sbjct 433 APAVVSAVLSSLLLNYFLTAPRHTFTIAEPDAAVTELVLLLIAVAVAILVDGATKRTREA 492 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRV-----RQGASTGETVA 559 RRASQEAELL LFAGSVLRGAD TLL+RVRETYSQR V+MLR G E VA Sbjct 493 RRASQEAELLILFAGSVLRGADPETLLERVRETYSQRTVSMLREPGEQDHAGGRKVEVVA 552 Query 560 CVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEE 619 CVG +PC VDSADTAIEVGDDEFWML+AGRKL+ARDRRVL+AVA QAAGL++QRELAEE Sbjct 553 CVGRDPCVTVDSADTAIEVGDDEFWMLLAGRKLSARDRRVLSAVAKQAAGLIRQRELAEE 612 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A +AEAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSPEDTAELLATIEE Sbjct 613 ASRAEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPEDTAELLATIEE 672 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 SIDQLTALV NLLDSSRLAAGV+RP +RR YLEE VQRAL+SIGKGATGF RS IDRVKV Sbjct 673 SIDQLTALVGNLLDSSRLAAGVVRPDMRRVYLEETVQRALISIGKGATGFSRSAIDRVKV 732 Query 740 DVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGT 799 +VGDAV +AD GLLERVLANLIDNALRYAP+CVVRVNAGRV +RVLINV+DEGPGVP G Sbjct 733 EVGDAVVLADPGLLERVLANLIDNALRYAPNCVVRVNAGRVGDRVLINVVDEGPGVPHGA 792 Query 800 EEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP 856 EEQ+F FQR GDHDNTTGVGLGMSVARGFVEAMGGTI+A DTPGGGLTV ++LAAP Sbjct 793 EEQIFEAFQRLGDHDNTTGVGLGMSVARGFVEAMGGTIAAGDTPGGGLTVSVELAAP 849 >gi|41407094|ref|NP_959930.1| hypothetical protein MAP0996c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395445|gb|AAS03313.1| KdpD [Mycobacterium avium subsp. paratuberculosis K-10] Length=858 Score = 1324 bits (3426), Expect = 0.0, Method: Compositional matrix adjust. Identities = 672/840 (80%), Positives = 752/840 (90%), Gaps = 7/840 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTY+MLGEAHRRLERGTD+VA VVETHGR KTA+LLEGIE+IPP Sbjct 14 KRGELRIYLGAAPGVGKTYSMLGEAHRRLERGTDLVAGVVETHGRAKTAELLEGIEIIPP 73 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 RY+EYRG RFPELDV AVL RHPQVVLVDELAHTNTPGSKNPKRWQDV+E+LDAGITVIS Sbjct 74 RYIEYRGGRFPELDVPAVLARHPQVVLVDELAHTNTPGSKNPKRWQDVEELLDAGITVIS 133 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQKE +PD +VR A QVEL+DITPEALRRRL+HGNVYA + Sbjct 134 TVNVQHLESLNDVVAQITGIEQKETVPDSVVRQASQVELIDITPEALRRRLSHGNVYAPD 193 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ LLWLADQVD AL KYRA+ KIT TWEARERVVVAVTGG Sbjct 194 RIDAALSNYFRRGNLTALRELVLLWLADQVDTALAKYRAENKITDTWEARERVVVAVTGG 253 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA+SL A++HT+VGD Sbjct 254 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSESRMAKIRELASSLDASLHTIVGD 313 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 +VP ALL+FAREMNATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH + R Sbjct 314 EVPAALLEFAREMNATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEESKRG 373 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S ++PRER +ASWLAAL+VPSVICA+TV WLD ++ GGESALFF+GVL+V LLGG+ Sbjct 374 FRASSLAPRERRVASWLAALIVPSVICAVTVTWLDPYLDTGGESALFFVGVLLVGLLGGI 433 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNY+L PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREA Sbjct 434 APAALSAVLSGLLLNYYLIAPRHSFTIAEPNSAITELVLLLIAVAVAVLVDFAAKRTREA 493 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR----VRQGASTGETVAC 560 RRASQEAELL LFAGSVLRGADL TLL+RVRETY+QR+V+MLR R G + + VAC Sbjct 494 RRASQEAELLTLFAGSVLRGADLETLLERVRETYAQRSVSMLRESEDARAGGTKTQVVAC 553 Query 561 VGTNPCRDVDSADTAIEVG---DDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VG +PC VD+ADTAIEVG EF ML+AGRKL+ARDRRVL+AVA QAAGL++QRELA Sbjct 554 VGRDPCVSVDAADTAIEVGGPDSSEFQMLLAGRKLSARDRRVLSAVARQAAGLIRQRELA 613 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEA + EAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFSP DTAELLATI Sbjct 614 EEASRTEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSPTDTAELLATI 673 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQLTALV NLLDSSRLAAG I P LRR YLEEAVQRALVSIGKGATGF+RS IDRV Sbjct 674 EESIDQLTALVGNLLDSSRLAAGAIHPDLRRVYLEEAVQRALVSIGKGATGFFRSAIDRV 733 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KVDVGDA+ MADAGLLERVLANLIDNALRYAP+CVVRVNAG+V +RVLI+VIDEGPG+P Sbjct 734 KVDVGDAMVMADAGLLERVLANLIDNALRYAPNCVVRVNAGQVGDRVLISVIDEGPGIPH 793 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 G EEQ+F FQR GDHDNTTGVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++D+AAP+ Sbjct 794 GAEEQIFEAFQRLGDHDNTTGVGLGMSVARGFVEAMGGTITATDTPGGGLTVMVDMAAPQ 853 >gi|254820273|ref|ZP_05225274.1| sensor protein KdpD [Mycobacterium intracellulare ATCC 13950] Length=831 Score = 1316 bits (3405), Expect = 0.0, Method: Compositional matrix adjust. Identities = 660/829 (80%), Positives = 735/829 (89%), Gaps = 8/829 (0%) Query 39 VGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPRYVEYRGARFPELD 98 +GKTY+MLGEAHRRLERGTD+VA VVETHGR KTA+LLEGIE+IPPRY+EYRG RFPELD Sbjct 1 MGKTYSMLGEAHRRLERGTDLVAGVVETHGRAKTAELLEGIEIIPPRYIEYRGGRFPELD 60 Query 99 VEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVISTVNIQHLEGLNDVV 158 V AVL R PQVVLVDELAHTN PGSKNPKRWQDV+E+LDAGITVISTVN+QHLE LNDVV Sbjct 61 VPAVLARRPQVVLVDELAHTNAPGSKNPKRWQDVEELLDAGITVISTVNVQHLESLNDVV 120 Query 159 EQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAERVDAALSNYFRTGN 218 QITGIEQKE +PD IVR A QVEL+DITPEALRRRL+HGNVYA +R+DAALSNYFR GN Sbjct 121 AQITGIEQKETVPDLIVRQAAQVELIDITPEALRRRLSHGNVYAPDRIDAALSNYFRRGN 180 Query 219 LTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGPESETLVRRASRIA 278 LTALRE+ALLWLADQVD AL KYRA+ KIT WEARERVVVAVTGG ESETLVRRASRIA Sbjct 181 LTALRELALLWLADQVDTALAKYRAENKITDMWEARERVVVAVTGGRESETLVRRASRIA 240 Query 279 SKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGDDVPTALLDFAREMN 338 SKS+AELMVVHV+RGDGLAG+S ++ ++RELA+SL A++HTVVGDDVPTALL+FAREMN Sbjct 241 SKSTAELMVVHVVRGDGLAGLSESRMAKIRELASSLDASLHTVVGDDVPTALLEFAREMN 300 Query 339 ATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRASGWSRVSPRERHIA 398 ATQLV+GTSRRSRWARLF+EGIG R V+ G IDVH+VTH A R + ++PRER + Sbjct 301 ATQLVIGTSRRSRWARLFEEGIGPRIVELSGKIDVHLVTHEEAKRGFRTASLAPRERRVT 360 Query 399 SWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGVAPAALSALLSGMLL 458 SWLAAL+VPS+ICAITV LD ++ GGESALFF+GVL+V L GGVAPAALSA+LSG+LL Sbjct 361 SWLAALIVPSIICAITVTALDPYLDTGGESALFFVGVLLVGLFGGVAPAALSAMLSGLLL 420 Query 459 NYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREARRASQEAELLALFA 518 NYFL PR+++TIAEP++A+TE VLL +AVAVAVLVD AA RTREARRASQEAELL LFA Sbjct 421 NYFLIAPRHSFTIAEPNSAITELVLLLIAVAVAVLVDFAAKRTREARRASQEAELLTLFA 480 Query 519 GSVLRGADLATLLQRVRETYSQRAVTML-----RVRQGASTGETVACVGTNPCRDVDSAD 573 GSVLRGADL TLL+RVRETY+QRAV ML R G +T + VACVG +PC VDSAD Sbjct 481 GSVLRGADLETLLERVRETYAQRAVAMLRGAGEEARGGGTTSDVVACVGRDPCVTVDSAD 540 Query 574 TAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAIARADELR 633 TAIEVGDDEFWML+AGRKL+ARDRRVL+AVA QAAGL++QRELAEEA + EA+ RADELR Sbjct 541 TAIEVGDDEFWMLLAGRKLSARDRRVLSAVARQAAGLIRQRELAEEASRTEAVVRADELR 600 Query 634 RSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTALVANLLD 693 RSLLSAVSHDLRTPLAAAKVAVSSLR EDVAFS DTAELLATIEESIDQLTALV NLLD Sbjct 601 RSLLSAVSHDLRTPLAAAKVAVSSLRAEDVAFSATDTAELLATIEESIDQLTALVGNLLD 660 Query 694 SSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDAVAMADAGLL 753 SSRLAAGVI P+L R YLEE VQRALVSIGKGATG++RS IDRVKVDVGDA+ MADAGLL Sbjct 661 SSRLAAGVIHPELSRVYLEETVQRALVSIGKGATGYFRSAIDRVKVDVGDAMVMADAGLL 720 Query 754 ERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLFAPFQRPGDH 813 ERVLANLIDNALRYAP C+VRVNAGRV +RVLINVIDEGPG+P G EEQ+F FQR GDH Sbjct 721 ERVLANLIDNALRYAPHCLVRVNAGRVGDRVLINVIDEGPGIPHGAEEQIFEAFQRLGDH 780 Query 814 DNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP---EDR 859 DNTTGVGLGMSVARGFVEAMGGTI+ATDTPGGGLTV++++AAP EDR Sbjct 781 DNTTGVGLGMSVARGFVEAMGGTITATDTPGGGLTVIVEMAAPQSIEDR 829 >gi|120405712|ref|YP_955541.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] gi|119958530|gb|ABM15535.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium vanbaalenii PYR-1] Length=850 Score = 1296 bits (3355), Expect = 0.0, Method: Compositional matrix adjust. Identities = 668/839 (80%), Positives = 747/839 (90%), Gaps = 10/839 (1%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGR KTA+L EGIE++PP Sbjct 14 KRGELRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRKKTAELFEGIEIVPP 73 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 + + YRG+ F ELDVEAVLRR+PQVVLVDELAHTNTPGSKN KRWQD++E+LDAGITVI+ Sbjct 74 KLIAYRGSDFAELDVEAVLRRNPQVVLVDELAHTNTPGSKNTKRWQDIEELLDAGITVIT 133 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQ+EK+PDE+VRAADQVELVDITPEALRRRLAHGNVYA E Sbjct 134 TVNVQHLESLNDVVTQITGIEQQEKVPDEVVRAADQVELVDITPEALRRRLAHGNVYAPE 193 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 RVDAALSNYFR GNLTALRE+ALLWLADQVD+ALEKYRAD KIT TWEARERVVVAVTGG Sbjct 194 RVDAALSNYFRRGNLTALRELALLWLADQVDSALEKYRADNKITDTWEARERVVVAVTGG 253 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHV++GDGL+GVS PQ+G+VRELA S+GAT+HTVVGD Sbjct 254 PESETLVRRASRIASKSSAELMVVHVVQGDGLSGVSGPQMGKVRELAASIGATLHTVVGD 313 Query 325 ---DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAA 381 VP ALLDFAREMNATQLV+GTSRRSRWAR+FDEGIGA VQ+ G IDVHMVTH A Sbjct 314 GAGGVPAALLDFAREMNATQLVLGTSRRSRWARIFDEGIGATVVQKSGRIDVHMVTHEQA 373 Query 382 SRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALL 441 S W+RVSPR+RH SWLAAL VP ICA TV LDRF+GIGGESA+FFIGVL+VALL Sbjct 374 GGESLWARVSPRQRHAVSWLAALAVPGAICAATVLLLDRFLGIGGESAMFFIGVLVVALL 433 Query 442 GGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRT 501 GGVAPAALSA+LSG+LLN+FL EPR+T+TI+EPD+A+T VLL +AVAVA LVDGAA+RT Sbjct 434 GGVAPAALSAVLSGVLLNFFLVEPRHTFTISEPDSAITIVVLLVVAVAVAALVDGAANRT 493 Query 502 REARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACV 561 RE+RRA++EAELLALFAG+VLRGADL TLL+RVRE YSQ++VT+ VR A G V C Sbjct 494 RESRRAAREAELLALFAGAVLRGADLNTLLERVREAYSQQSVTL--VRGEAHGGGVVGCA 551 Query 562 GTNPCRDVDSADTAIEVG--DD--EFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 G+ PC V++ADTAIEVG DD EFW+L+AGR+L ARDRRVL AVA QAAGL +QRELA Sbjct 552 GSEPCVTVETADTAIEVGSKDDPEEFWLLLAGRRLDARDRRVLGAVANQAAGLARQRELA 611 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EEAG+AEAIARADELRRSLLSAVSHDLRTPLAAAK AVSSLR+EDV FSPEDTAELLAT+ Sbjct 612 EEAGRAEAIARADELRRSLLSAVSHDLRTPLAAAKAAVSSLRSEDVGFSPEDTAELLATV 671 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EESIDQL+ LV NLLDSSRLAAGV+RP+L+ YLEEAV RAL+ I +G+TG R+G+DRV Sbjct 672 EESIDQLSGLVGNLLDSSRLAAGVVRPELQPVYLEEAVPRALLGISRGSTGL-RAGLDRV 730 Query 738 KVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPR 797 KV+VGD V MAD+GLLERVLAN+IDNALRYAPD VRV AGRV +RVLI V DEGPGV R Sbjct 731 KVEVGDTVVMADSGLLERVLANVIDNALRYAPDGPVRVTAGRVADRVLIAVADEGPGVAR 790 Query 798 GTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP 856 G E +LFAPFQR GD D ++GVGLG+SVARGFVEAMGGTISATDTPGGG+TV IDLAAP Sbjct 791 GAETELFAPFQRLGDQDTSSGVGLGLSVARGFVEAMGGTISATDTPGGGMTVEIDLAAP 849 >gi|240169879|ref|ZP_04748538.1| sensor protein KdpD [Mycobacterium kansasii ATCC 12478] Length=848 Score = 1269 bits (3285), Expect = 0.0, Method: Compositional matrix adjust. Identities = 674/834 (81%), Positives = 744/834 (90%), Gaps = 2/834 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTYAMLGEAHRRLERGTD+VAAVVETHGR KTA LL+GIE+IPP Sbjct 9 KRGELRIYLGAAPGVGKTYAMLGEAHRRLERGTDLVAAVVETHGRMKTAALLDGIEIIPP 68 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 YVEYRG FPELDV AVL RHPQVVLVDELAHTNTPGSKN KRWQDV+E+LDAGITVIS Sbjct 69 HYVEYRGTTFPELDVPAVLARHPQVVLVDELAHTNTPGSKNHKRWQDVEELLDAGITVIS 128 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVNIQHLE LNDVV QITGIEQKE +PD +VR A QVEL+DITPEALRRRL+HGNVYA++ Sbjct 129 TVNIQHLESLNDVVAQITGIEQKETLPDSVVRQAAQVELIDITPEALRRRLSHGNVYASD 188 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 ++DAALSNYFR GNLTALRE+ALLWLADQVD AL KYRA+ +IT WEARERVVVAVTGG Sbjct 189 KIDAALSNYFRRGNLTALRELALLWLADQVDTALAKYRAENQITDLWEARERVVVAVTGG 248 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHVIRGDGLAG+S ++ ++RELA SL A++HTVVGD Sbjct 249 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGLSEARMSKIRELAGSLDASLHTVVGD 308 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DV ALLDFARE+NATQLV+GTSRR+RWARLF+EGIG V+ G IDVH+VTH + R Sbjct 309 DVADALLDFAREINATQLVIGTSRRTRWARLFEEGIGQAIVERSGKIDVHLVTHEESRRG 368 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 + ++PRER +ASWLAA++VPS+ICAITVA LDR++ GESALFF+GVL+VALLGGV Sbjct 369 LRTTPIAPRERRVASWLAAVIVPSLICAITVAVLDRYLDTSGESALFFVGVLVVALLGGV 428 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APA LSA+LS +LLNY+LT+PR+T+TIAEP AAVTE VLL +AVAVAVLVDGAA R REA Sbjct 429 APAVLSAVLSSLLLNYYLTDPRHTFTIAEPSAAVTEAVLLLVAVAVAVLVDGAAKRAREA 488 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLR--VRQGASTGETVACVG 562 RRASQEAELL LFAGSVLRGADL TLL+RVRETYSQRAV+MLR + + E VA VG Sbjct 489 RRASQEAELLTLFAGSVLRGADLETLLERVRETYSQRAVSMLREYADEDRTRSEVVASVG 548 Query 563 TNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQ 622 PC VDSADTAIEVGDDEFWMLMAG+KL+ARDRRVL AVA QAAGLV+QRE+AEEA + Sbjct 549 KEPCATVDSADTAIEVGDDEFWMLMAGKKLSARDRRVLNAVARQAAGLVRQREMAEEASR 608 Query 623 AEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESID 682 EAI RADELRRSLLSAVSHDLRTPLAAAKVAVSSLR +D+AFSP DTAELLATIEESID Sbjct 609 TEAIVRADELRRSLLSAVSHDLRTPLAAAKVAVSSLRAQDIAFSPADTAELLATIEESID 668 Query 683 QLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVG 742 LTALV NLLDSSRLAAGV+RP L+R YLEE VQRALVSIGKGATGFYRS IDRVKVDVG Sbjct 669 ALTALVGNLLDSSRLAAGVLRPDLQRVYLEEEVQRALVSIGKGATGFYRSAIDRVKVDVG 728 Query 743 DAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQ 802 AV MADAGLLERVLANLIDNALRYAPDCVVRVNAGRV +RVLINVIDEGPGVP G++ Q Sbjct 729 GAVVMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVGDRVLINVIDEGPGVPPGSQGQ 788 Query 803 LFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP 856 +F PFQR GD+DNTTGVGLGMSVARGFVEAMGGT++A DTPGGGLTVV+DLAAP Sbjct 789 IFEPFQRLGDNDNTTGVGLGMSVARGFVEAMGGTVAAGDTPGGGLTVVVDLAAP 842 >gi|118473402|ref|YP_889636.1| sensor protein KdpD [Mycobacterium smegmatis str. MC2 155] gi|118174689|gb|ABK75585.1| sensor protein KdpD [Mycobacterium smegmatis str. MC2 155] Length=839 Score = 1237 bits (3200), Expect = 0.0, Method: Compositional matrix adjust. Identities = 644/833 (78%), Positives = 729/833 (88%), Gaps = 3/833 (0%) Query 24 TKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIP 83 +KRG+LRIYLGAAPGVGKTYAMLGEAHRRL+RGTD+VAAVVETHGR TA+LL GIE+IP Sbjct 9 SKRGELRIYLGAAPGVGKTYAMLGEAHRRLDRGTDLVAAVVETHGRKNTAELLAGIEVIP 68 Query 84 PRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVI 143 PRY+EYRG RFPELDV AVL R PQVVLVDELAHTNTPGSKN KRWQDV E+L+AGITVI Sbjct 69 PRYIEYRGGRFPELDVPAVLDRKPQVVLVDELAHTNTPGSKNAKRWQDVDELLNAGITVI 128 Query 144 STVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAA 203 STVN+QHL+ LNDVV ITGIEQ+E +PDE+VR+ADQ+ELVDITPEALRRRL+HGNVYA Sbjct 129 STVNVQHLDSLNDVVAAITGIEQQETVPDEVVRSADQIELVDITPEALRRRLSHGNVYAP 188 Query 204 ERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTG 263 ER+DAALSNYFR GNLTALRE+ALLWLADQVDAAL KYRAD KITA WE RERVVVAVTG Sbjct 189 ERIDAALSNYFRRGNLTALRELALLWLADQVDAALAKYRADNKITALWETRERVVVAVTG 248 Query 264 GPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVG 323 G ESETLVRRA RIASKSSAELMVVHV+ GDGL G+SA Q+G+VRELA SLGAT+HTVVG Sbjct 249 GTESETLVRRAFRIASKSSAELMVVHVVHGDGLTGISAAQMGKVRELAVSLGATVHTVVG 308 Query 324 DDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASR 383 DDVPTALLDFAR++NATQLV+GTSRRSRWAR+FDEGIGA VQ+ IDVHMVTH AA R Sbjct 309 DDVPTALLDFARDINATQLVLGTSRRSRWARMFDEGIGATVVQQSQKIDVHMVTHEAAKR 368 Query 384 ASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGG 443 WS SPR+RH ASW AAL+VPS+ICA +VA LD F+ +GG+SALFF+GVL+VALLGG Sbjct 369 GFRWSSTSPRQRHAASWAAALMVPSLICAFSVAILDPFLDVGGKSALFFVGVLVVALLGG 428 Query 444 VAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTRE 503 VAPAALSA+LSG+LLNYFLT PR+T+T+++PD+A+T VLLA+AVAVA LVDGAA R RE Sbjct 429 VAPAALSAVLSGLLLNYFLTSPRHTFTMSDPDSALTIVVLLAVAVAVAALVDGAAKRARE 488 Query 504 ARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGT 563 AR AS+EAELLALFAGSVLRGADL LL+RVRETY+QRAV++LR +T V CVG Sbjct 489 ARHASREAELLALFAGSVLRGADLTALLERVRETYAQRAVSLLRETSDGAT--IVDCVGQ 546 Query 564 NPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQA 623 +PC V +ADTA+E G DEFW+L++GR+L ARDRRVL AVA QAAGLV+QREL EEA +A Sbjct 547 DPCDRVAAADTAVEAG-DEFWLLLSGRELPARDRRVLGAVANQAAGLVRQRELTEEAAKA 605 Query 624 EAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQ 683 AIA+ADEL RSLLSAVSHDLRTPLAAAK A SSLR+ D+ FS EDTAELLATIEES+D Sbjct 606 NAIAKADELSRSLLSAVSHDLRTPLAAAKAAASSLRSCDIDFSAEDTAELLATIEESVDA 665 Query 684 LTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGD 743 LTALV NLLDSSRLAAGVI P+LR YLEE VQRAL+ I +G TG+ RS +DRVKV+VGD Sbjct 666 LTALVGNLLDSSRLAAGVIHPELRPVYLEETVQRALLGIRRGPTGYGRSAVDRVKVEVGD 725 Query 744 AVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQL 803 +VA+AD GLLERVLANLIDNALRYAPD ++RV AGRV +VLI V+DEGPG+PRG E+ L Sbjct 726 SVALADGGLLERVLANLIDNALRYAPDGLIRVTAGRVANKVLIAVVDEGPGIPRGAEDAL 785 Query 804 FAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP 856 FAPFQR GD + TTGVGLG+SVA+GFVEAMGGTISA DTPGGGLTV I+LA P Sbjct 786 FAPFQRLGDTNTTTGVGLGLSVAKGFVEAMGGTISAGDTPGGGLTVEIELAVP 838 >gi|108801193|ref|YP_641390.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119870325|ref|YP_940277.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. KMS] gi|108771612|gb|ABG10334.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. MCS] gi|119696414|gb|ABL93487.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. KMS] Length=836 Score = 1220 bits (3157), Expect = 0.0, Method: Compositional matrix adjust. Identities = 653/834 (79%), Positives = 732/834 (88%), Gaps = 8/834 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTYAMLGEAHRRL RGTDVVAAVVETHGR KTA+LL+GIE++PP Sbjct 8 KRGELRIYLGAAPGVGKTYAMLGEAHRRLARGTDVVAAVVETHGRAKTAELLDGIEVLPP 67 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R+V YRG RFPELDV+AVL R P+VVLVDELAHTNTPGS+N KRWQDV+ +L AGITVIS Sbjct 68 RHVTYRGGRFPELDVDAVLARRPEVVLVDELAHTNTPGSRNAKRWQDVEALLAAGITVIS 127 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQ+E +PDE+VR+ADQVELVDITPEALRRRL+HGNVYA E Sbjct 128 TVNVQHLESLNDVVTQITGIEQRETVPDEVVRSADQVELVDITPEALRRRLSHGNVYAPE 187 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVDAAL KYRAD +IT TWEARERVVVAVTGG Sbjct 188 RIDAALSNYFRRGNLTALRELALLWLADQVDAALAKYRADNRITDTWEARERVVVAVTGG 247 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHV+RGDGL GVSAP++GRVRELA SLGAT+HTV GD Sbjct 248 PESETLVRRASRIASKSSAELMVVHVVRGDGLTGVSAPEMGRVRELAASLGATLHTVTGD 307 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPTALLDFARE NATQLV+GTSRRSRWAR+ DEGIGA VQ G IDVHMVTH A R+ Sbjct 308 DVPTALLDFARERNATQLVLGTSRRSRWARILDEGIGAAVVQRSGKIDVHMVTHDEAHRS 367 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 SPR R ASWLAAL VP+ ICA+TV LD +G+ GESA+FF+GVL+VALLGGV Sbjct 368 ---PTASPRTRRAASWLAALAVPAAICALTVLLLDPLLGVAGESAVFFVGVLLVALLGGV 424 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNYFL PR+T+TIAEPD+A+T V+LA+AVAVA LVDGAASR REA Sbjct 425 APAALSAVLSGLLLNYFLINPRHTFTIAEPDSALTIVVMLAVAVAVAALVDGAASRRREA 484 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 R A++EAELLALFAG+VLRGADL LL+RVRETY QRAV++LR + G VACVG + Sbjct 485 RHAAREAELLALFAGAVLRGADLTVLLERVRETYGQRAVSLLREKAG-----VVACVGAD 539 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 PC DV++ADTAIEVGDDEFW+L+AGRKLAARDRRVL+AVA QAAGLV+QREL EEAG+AE Sbjct 540 PCVDVNTADTAIEVGDDEFWLLLAGRKLAARDRRVLSAVAGQAAGLVRQRELTEEAGRAE 599 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 AIARADELRRSLLSAVSHDLRTPLAAAK AVSSLR+++V FS +D AELLAT+EES+DQL Sbjct 600 AIARADELRRSLLSAVSHDLRTPLAAAKAAVSSLRSDEVDFSADDRAELLATVEESVDQL 659 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 TALVANLLDSSRLAAGV+RPQL YLEEAVQRAL+ I +GATG GIDRV+VDV Sbjct 660 TALVANLLDSSRLAAGVVRPQLSAVYLEEAVQRALLGISRGATGSGDIGIDRVEVDVDGC 719 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 V AD+GLLERVLANLIDNALRYAPD VRV AGRV ERVLI V D GPG+P G ++++F Sbjct 720 VVAADSGLLERVLANLIDNALRYAPDGPVRVTAGRVGERVLIAVTDTGPGIPPGGQDRVF 779 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPED 858 FQR GD D T+GVGLG+SVARGFVEAMGGT++A DTPGGGLTV IDLAAP++ Sbjct 780 GAFQRLGDQDTTSGVGLGLSVARGFVEAMGGTVTANDTPGGGLTVEIDLAAPQE 833 >gi|126437172|ref|YP_001072863.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. JLS] gi|126236972|gb|ABO00373.1| osmosensitive K+ channel signal transduction histidine kinase [Mycobacterium sp. JLS] Length=836 Score = 1218 bits (3152), Expect = 0.0, Method: Compositional matrix adjust. Identities = 652/834 (79%), Positives = 731/834 (88%), Gaps = 8/834 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKTYAMLGEAHRRL RGTDVVAAVVETHGR KTA+LL+GIE++PP Sbjct 8 KRGELRIYLGAAPGVGKTYAMLGEAHRRLARGTDVVAAVVETHGRAKTAELLDGIEVLPP 67 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R+V YRG RFPELDV+AVL R P+V LVDELAHTNTPGS+N KRWQDV+E+L AGITVIS Sbjct 68 RHVTYRGGRFPELDVDAVLARRPEVALVDELAHTNTPGSRNAKRWQDVEELLAAGITVIS 127 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITGIEQ+E +PDE+VR+ADQVELVDITPEALRRRL+HGNVYA E Sbjct 128 TVNVQHLESLNDVVTQITGIEQRETVPDEVVRSADQVELVDITPEALRRRLSHGNVYAPE 187 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAALSNYFR GNLTALRE+ALLWLADQVDAAL KYRAD +IT TWEARERVVVAVTGG Sbjct 188 RIDAALSNYFRRGNLTALRELALLWLADQVDAALAKYRADNRITDTWEARERVVVAVTGG 247 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHV+RGDGL GVSAP++GRVRELA SLGAT+HTV GD Sbjct 248 PESETLVRRASRIASKSSAELMVVHVVRGDGLTGVSAPEMGRVRELAASLGATLHTVTGD 307 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPTALLDFARE NATQLV+GTSRRSRWAR+ DEGIGA VQ G IDVHMVTH A R+ Sbjct 308 DVPTALLDFARERNATQLVLGTSRRSRWARILDEGIGAAVVQRSGKIDVHMVTHNEAHRS 367 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 SPR R ASWLAAL VP+ ICA+TV LD +G+ GESA+FF+GVL+VALLGGV Sbjct 368 ---PTASPRTRRAASWLAALAVPAAICALTVLLLDPLLGVAGESAVFFVGVLLVALLGGV 424 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAALSA+LSG+LLNYFL PR+T+TIAEPD+A+T V+LA+AVAVA LVDGAASR REA Sbjct 425 APAALSAVLSGLLLNYFLIAPRHTFTIAEPDSALTIVVMLAVAVAVAALVDGAASRRREA 484 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 R A++EAELLALFAG+VLRGADL LL+RVRETY QRAV++LR + G VACVG + Sbjct 485 RHAAREAELLALFAGAVLRGADLTVLLERVRETYGQRAVSLLREKAG-----VVACVGAD 539 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 PC DV++ADTAIEVGDDEFW+L+AGRKLAARDRRVL+AVA QAAGLV+QREL EAG+AE Sbjct 540 PCVDVNTADTAIEVGDDEFWLLLAGRKLAARDRRVLSAVAGQAAGLVRQRELTAEAGRAE 599 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 AIARADELRRSLLSAVSHDLRTPLAAAK AVSSLR+++V FS +D AELLAT+EES+DQL Sbjct 600 AIARADELRRSLLSAVSHDLRTPLAAAKAAVSSLRSDEVDFSADDRAELLATVEESVDQL 659 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 TALVANLLDSSRLAAGV+RPQL YLEEAVQRAL+ I +GATG GIDRV+VDV Sbjct 660 TALVANLLDSSRLAAGVVRPQLSAVYLEEAVQRALLGISRGATGSGDIGIDRVEVDVDGC 719 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 V AD+GLLERVLANLIDNALRYAPD VRV AGRV ERVLI V D GPG+P G ++++F Sbjct 720 VVAADSGLLERVLANLIDNALRYAPDGPVRVTAGRVGERVLIAVTDTGPGIPPGGQDRVF 779 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPED 858 FQR GD D T+GVGLG+SVARGFVEAMGGT++A DTPGGGLTV IDLAAP++ Sbjct 780 GAFQRLGDQDTTSGVGLGLSVARGFVEAMGGTVTANDTPGGGLTVEIDLAAPQE 833 >gi|325675931|ref|ZP_08155614.1| sensor histidine kinase KdpD [Rhodococcus equi ATCC 33707] gi|325553169|gb|EGD22848.1| sensor histidine kinase KdpD [Rhodococcus equi ATCC 33707] Length=857 Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/838 (71%), Positives = 691/838 (83%), Gaps = 7/838 (0%) Query 20 EHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGI 79 +H +RG+LRIYLGAAPGVGKTYAMLGEAHRRLERG DVVAAVVETHGR +TA+ G+ Sbjct 16 QHRAPRRGELRIYLGAAPGVGKTYAMLGEAHRRLERGGDVVAAVVETHGRARTAEQAAGL 75 Query 80 EMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAG 139 E+IPP++VEYRG PELDVEAVL R P VVLVDELAHTNTPGS+N KRWQDV E+LDAG Sbjct 76 ELIPPKFVEYRGTAMPELDVEAVLARRPAVVLVDELAHTNTPGSRNEKRWQDVYELLDAG 135 Query 140 ITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGN 199 I V+ST+N+QHLE LNDVV+QITG+ Q+E +PD +VRAA QVELVDITPEALRRRL+HGN Sbjct 136 IDVLSTLNVQHLESLNDVVQQITGVTQQETVPDAVVRAASQVELVDITPEALRRRLSHGN 195 Query 200 VYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVV 259 VY+AE+VDAAL NYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARERVVV Sbjct 196 VYSAEKVDAALGNYFRRGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARERVVV 255 Query 260 AVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMH 319 AVTGGPESETLVRRASRIA K+SAELMVVHV+RGDG+ GVSA ++G+VR+LATS+GA++H Sbjct 256 AVTGGPESETLVRRASRIAGKASAELMVVHVVRGDGIEGVSAAEMGKVRKLATSIGASLH 315 Query 320 TVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHP 379 +VVGDDVPT LL+FARE+NATQLV+GTSRRSRWAR+ DEGIGA VQ+ G IDVHMVTH Sbjct 316 SVVGDDVPTTLLEFAREVNATQLVIGTSRRSRWARILDEGIGAAIVQQSGKIDVHMVTHD 375 Query 380 AASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVA 439 A+ S + ER SWLAA+VVPS+ A+ + +DR G+GG++ALFF+ VL+V+ Sbjct 376 EAATRHRISFLGRGERRAVSWLAAVVVPSIAAAL-MGLIDRVAGVGGQNALFFVVVLVVS 434 Query 440 LLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAAS 499 LLGGV PA LSAL+SG+LLNYF T P Y++TIA+PD +T VLL +AVAVA+LVD AA Sbjct 435 LLGGVGPAILSALISGLLLNYFFTAPLYSFTIAQPDNFITTVVLLVVAVAVAILVDAAAK 494 Query 500 RTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVA 559 R+REARRASQEAELLALFAGSVLRGADL LL++VRETYSQ V+++R +G V+ Sbjct 495 RSREARRASQEAELLALFAGSVLRGADLPALLEKVRETYSQTGVSVVRRGEG-----VVS 549 Query 560 CVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEE 619 G + VD A T EV D E+ +L+AG +L ARDR+VL AVA QA GL++QR+LAEE Sbjct 550 AAGASAPSTVDEAGTVCEVSDGEYALLLAGEELGARDRKVLYAVANQAVGLIRQRQLAEE 609 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A +A+A+A AD LRRSLLSAVSHDLRTPLAA K AVSSLR++DV FSPEDTAELLAT+EE Sbjct 610 ASKAQALAEADRLRRSLLSAVSHDLRTPLAAVKAAVSSLRSDDVEFSPEDTAELLATVEE 669 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 S DQLTALV NLLDSSRLAAGV++P LRR YLEE V RALV G G G R D+VKV Sbjct 670 STDQLTALVGNLLDSSRLAAGVVKPTLRRVYLEEVVHRALVGAGFGGPGSARRVRDQVKV 729 Query 740 DVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGT 799 +VGDA MADAGLLERV+ANL+DNALRYAPD VR+ A R + + I V D GPG+ RGT Sbjct 730 EVGDAAVMADAGLLERVIANLVDNALRYAPDEPVRIGAARAGDHMTITVADTGPGLARGT 789 Query 800 EEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDL-AAP 856 EQ+F FQR GD DNT GVGLG+SV +GFVEAMGGT+ TDTPGGGLT++++L AAP Sbjct 790 HEQVFDAFQRLGDRDNTVGVGLGLSVVKGFVEAMGGTVGVTDTPGGGLTMIVELDAAP 847 >gi|312140453|ref|YP_004007789.1| two component system sensor kinase kdpd [Rhodococcus equi 103S] gi|311889792|emb|CBH49109.1| two component system sensor kinase KdpD [Rhodococcus equi 103S] Length=847 Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/838 (71%), Positives = 690/838 (83%), Gaps = 7/838 (0%) Query 20 EHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGI 79 +H +RG+LRIYLGAAPGVGKTYAMLGEAHRRLERG DVVAAVVETHGR +TA+ G+ Sbjct 6 QHRAPRRGELRIYLGAAPGVGKTYAMLGEAHRRLERGGDVVAAVVETHGRARTAEQAAGL 65 Query 80 EMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAG 139 E+IPP++VEYRG PELDVEAVL R P VVLVDELAHTNTPGS+N KRWQDV E+LDAG Sbjct 66 ELIPPKFVEYRGTAMPELDVEAVLARRPAVVLVDELAHTNTPGSRNEKRWQDVYELLDAG 125 Query 140 ITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGN 199 I V+ST+N+QHLE LNDVV+QITG+ Q+E +PD +VRAA QVELVDITPEALRRRL+HGN Sbjct 126 IDVLSTLNVQHLESLNDVVQQITGVTQQETVPDAVVRAASQVELVDITPEALRRRLSHGN 185 Query 200 VYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVV 259 VY+AE+VDAAL NYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARERVVV Sbjct 186 VYSAEKVDAALGNYFRRGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARERVVV 245 Query 260 AVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMH 319 AVTGGPESETLVRRASRIA K+SAELMVVHV+RGDG+ GVSA ++G+VR+LATS+GA++H Sbjct 246 AVTGGPESETLVRRASRIAGKASAELMVVHVVRGDGIEGVSAAEMGKVRKLATSIGASLH 305 Query 320 TVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHP 379 +VVGDDVPT LL+FARE+NATQLV+GTSRRSRWAR+ DEGIGA VQ+ G IDVHMVTH Sbjct 306 SVVGDDVPTTLLEFAREVNATQLVIGTSRRSRWARILDEGIGAAIVQQSGKIDVHMVTHD 365 Query 380 AASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVA 439 A+ S + ER SWLAA+VVPS+ A+ + +DR G+GG++ALFF+ VL+V+ Sbjct 366 EAATRHRISFLGRGERRAVSWLAAVVVPSIAAAL-MGLIDRVAGVGGQNALFFVVVLVVS 424 Query 440 LLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAAS 499 LLGGV PA LSAL+SG+LLNYF T P Y++TIA+PD +T VLL +AVAVA+LVD AA Sbjct 425 LLGGVGPAILSALISGLLLNYFFTAPLYSFTIAQPDNFITTVVLLVVAVAVAILVDAAAK 484 Query 500 RTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVA 559 R+REARRASQEAELLALFAGSVLRGADL LL++VRETYSQ V+++R +G V+ Sbjct 485 RSREARRASQEAELLALFAGSVLRGADLPALLEKVRETYSQTGVSVVRRGEG-----VVS 539 Query 560 CVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEE 619 G + VD A T EV D E+ +L+AG +L ARDR+VL AVA QA GL++QR+LAEE Sbjct 540 AAGASAPSTVDEAGTVCEVSDGEYALLLAGEELGARDRKVLYAVANQAVGLIRQRQLAEE 599 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A A+A+A AD LRRSLLSAVSHDLRTPLAA K AVSSLR++DV FSPEDTAELLAT+EE Sbjct 600 ASNAQALAEADRLRRSLLSAVSHDLRTPLAAVKAAVSSLRSDDVEFSPEDTAELLATVEE 659 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 S DQLTALV NLLDSSRLAAGV++P LRR YLEE V RALV G G G R D+VKV Sbjct 660 STDQLTALVGNLLDSSRLAAGVVKPTLRRVYLEEVVHRALVGAGFGGPGSARRVRDQVKV 719 Query 740 DVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGT 799 +VGDA MADAGLLERV+ANL+DNALRYAPD VR+ A R + + I V D GPG+ RGT Sbjct 720 EVGDAAVMADAGLLERVIANLVDNALRYAPDEPVRIGAARAGDHMTITVADTGPGLARGT 779 Query 800 EEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDL-AAP 856 EQ+F FQR GD DNT GVGLG+SV +GFVEAMGGT+ TDTPGGGLT++++L AAP Sbjct 780 HEQVFDAFQRLGDRDNTVGVGLGLSVVKGFVEAMGGTVGVTDTPGGGLTMIVELDAAP 837 >gi|333989634|ref|YP_004522248.1| two-component system response phosphate sensor kinase KdpD [Mycobacterium sp. JDM601] gi|333485602|gb|AEF34994.1| two-component system response phosphate sensor kinase KdpD [Mycobacterium sp. JDM601] Length=832 Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust. Identities = 590/835 (71%), Positives = 691/835 (83%), Gaps = 10/835 (1%) Query 22 VTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEM 81 V ++RG+LRIYLGA+PGVGKTYAMLGEAHRR ERGTDVVAA +ETHGR+KTA+LL GIE Sbjct 3 VLSQRGELRIYLGASPGVGKTYAMLGEAHRRAERGTDVVAAAIETHGRSKTAELLRGIET 62 Query 82 IPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGIT 141 + G ELDV AVL R P+VVLVD+LAHTN GS+NPKRWQD++E+LDAGIT Sbjct 63 V--------GDPSAELDVAAVLARRPRVVLVDDLAHTNAAGSRNPKRWQDIEELLDAGIT 114 Query 142 VISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVY 201 VISTVN+Q LE L+DVV +ITG + + +PD IVR A Q+EL+D+ PEALRRRL+HGNVY Sbjct 115 VISTVNVQQLESLSDVVTKITGTTEHDTVPDAIVRQAAQIELIDVAPEALRRRLSHGNVY 174 Query 202 AAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAV 261 E+VDAAL+NYFR LTALRE+ALLWLA QVDAAL KYRADKKIT TWEARER+V AV Sbjct 175 PPEKVDAALANYFRGETLTALRELALLWLAGQVDAALTKYRADKKITQTWEARERIVAAV 234 Query 262 TGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTV 321 TGGPESETLVRRASRIASK+ EL+V+HV+ GDG +G AP++G++R+LA SLGA++HTV Sbjct 235 TGGPESETLVRRASRIASKAGGELLVLHVL-GDGDSGAPAPRVGKIRQLAISLGASLHTV 293 Query 322 VGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAA 381 +GDDVP ALL+FAR++NATQLV+G+SRRSRWAR+ DEG+GA VQ+ G IDVH+VT Sbjct 294 IGDDVPAALLEFARDVNATQLVIGSSRRSRWARILDEGVGAAVVQQSGDIDVHIVTDEDT 353 Query 382 SRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALL 441 +SPRER SWLAA+ VP V+CAI V WLDR++ G +SALF +GVL+VALL Sbjct 354 KPNFRSVSISPRERRAVSWLAAVAVPCVMCAIVVGWLDRYLDTG-QSALFVVGVLVVALL 412 Query 442 GGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRT 501 GG+APA LSALLSG+LLNYFL PR +TIAE DAAVTE VLL +AVAVAVLVD AA R Sbjct 413 GGIAPAVLSALLSGVLLNYFLLAPRRGFTIAEHDAAVTEVVLLLVAVAVAVLVDSAAKRA 472 Query 502 REARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACV 561 REA RAS+EAEL+ LFAGSVLRGADL TLL+RVRETY+QRAV+++R+ G + E VA V Sbjct 473 REAGRASREAELMTLFAGSVLRGADLDTLLERVRETYAQRAVSLVRIPAGTARPEVVASV 532 Query 562 GTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAG 621 G PC VD ADT I+VGDDEFWMLM GR+LA+RDRRVL+ VA QAAGLV+Q ELA EA Sbjct 533 GEQPCTSVDLADTTIDVGDDEFWMLMVGRQLASRDRRVLSVVARQAAGLVRQEELAAEAS 592 Query 622 QAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESI 681 +A+A+ R DELRRSLLSAVSHDLRTPLAAAK AVSSLR +DVAFSP+DTAELLAT+EES+ Sbjct 593 RADAVMRTDELRRSLLSAVSHDLRTPLAAAKAAVSSLRADDVAFSPDDTAELLATVEESV 652 Query 682 DQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDV 741 DQLT LV NLLDSSRLAAGVIRP L + YLEE VQRAL+ IG+ + F R +D+VKV+V Sbjct 653 DQLTDLVGNLLDSSRLAAGVIRPALTKVYLEEVVQRALIGIGRRSNVFGRGRLDQVKVEV 712 Query 742 GDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEE 801 G VAMADAGLLERVLAN+IDNALRYA D VVRV AGRV +RVL+N+ DEG G+P G E Sbjct 713 GPTVAMADAGLLERVLANVIDNALRYASDSVVRVTAGRVGDRVLVNIADEGRGLPPGGEL 772 Query 802 QLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAP 856 F PFQR GD DNT+GVGLG+SVARGFVEAMGGT+SAT+TPGGGLT+V+DLAAP Sbjct 773 HAFDPFQRLGDRDNTSGVGLGLSVARGFVEAMGGTLSATETPGGGLTMVVDLAAP 827 >gi|226360366|ref|YP_002778144.1| turgor pressure sensor kinase KdpD [Rhodococcus opacus B4] gi|226238851|dbj|BAH49199.1| turgor pressure sensor kinase KdpD [Rhodococcus opacus B4] Length=850 Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust. Identities = 581/839 (70%), Positives = 684/839 (82%), Gaps = 10/839 (1%) Query 16 RWMIEHVTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKL 75 R +EH +RG+LRIYLGAAPGVGKT+AMLGEAHRR ERG DVVAAVVETHGR++TA Sbjct 15 RRDVEH---RRGELRIYLGAAPGVGKTFAMLGEAHRRRERGCDVVAAVVETHGRDRTAAQ 71 Query 76 LEGIEMIPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEI 135 L +E+IPP+ + YRG ELDV+AVL R P +VLVDELAHTNTPGS + KRWQDV+ + Sbjct 72 LGDLELIPPKLIAYRGTLGRELDVDAVLARRPALVLVDELAHTNTPGSVHEKRWQDVEIL 131 Query 136 LDAGITVISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRL 195 L AGI V+ST+N+QHLE LNDVV++ITG+ Q+E +PDE+VRAA QVELVDITPEALRRRL Sbjct 132 LAAGIDVLSTLNVQHLESLNDVVQRITGVVQQETVPDEVVRAATQVELVDITPEALRRRL 191 Query 196 AHGNVYAAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARE 255 +HGN+YAA++VDAALSNYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARE Sbjct 192 SHGNIYAADKVDAALSNYFRKGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARE 251 Query 256 RVVVAVTGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLG 315 RVVVAVTGGPESETLVRRA RIAS+SSAEL+VVHV+RGDGLAGVSAP++G+VR LATS+G Sbjct 252 RVVVAVTGGPESETLVRRAGRIASRSSAELIVVHVVRGDGLAGVSAPEMGKVRTLATSIG 311 Query 316 ATMHTVVGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHM 375 A++H+VVGDDVPT LLDFAR NATQLV+GTSRRSRWAR+FDEGIGA + + G IDVHM Sbjct 312 ASLHSVVGDDVPTTLLDFARSANATQLVLGTSRRSRWARIFDEGIGASVLHQSGSIDVHM 371 Query 376 VTHPAASRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGV 435 VTH + R S V R R + +W+AA++VPSV + +A +DR++G+ GE ALFFI V Sbjct 372 VTHSESHRLRRLSPVGSRSRTVIAWVAAVLVPSVATLVMMA-VDRWLGLVGEGALFFIVV 430 Query 436 LIVALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVD 495 L+V+LLGGVAPAA SAL+SG+ LNYF T P ++TIAEPD +T VLL +AVAVAVLVD Sbjct 431 LLVSLLGGVAPAAFSALISGLFLNYFFTPPVRSFTIAEPDNFITTVVLLVVAVAVAVLVD 490 Query 496 GAASRTREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTG 555 AA R+REARRASQEAELLALFAGSVLRGADL TLL++VRETY Q +V++L G Sbjct 491 AAAKRSREARRASQEAELLALFAGSVLRGADLGTLLEKVRETYGQESVSVLHRDHG---- 546 Query 556 ETVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRE 615 V VG P V+ ADT EVG+ E+ + + G +L ARDRRVL AVA QA G+++Q E Sbjct 547 -LVGSVGPRPPERVEDADTVCEVGEGEYALALRGSELHARDRRVLLAVANQAVGMIRQTE 605 Query 616 LAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLA 675 L EAGQA+A+A AD LRRSLLSAVSHDLRTPLAA K A SSLR++DVAFSPEDTAELLA Sbjct 606 LTREAGQAQALAEADRLRRSLLSAVSHDLRTPLAAVKAAASSLRSDDVAFSPEDTAELLA 665 Query 676 TIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGID 735 TIEES D LT+LV NLLDSSRLAAGV+ P LR YL+E V RALV +G G R+ + Sbjct 666 TIEESADVLTSLVGNLLDSSRLAAGVVTPTLRPVYLDEVVHRALVGLGIGGRTGTRAR-E 724 Query 736 RVKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGV 795 RV+VDVG AMAD+GLLERVLANLIDNALRY D V+RV A V +R ++ V D GPGV Sbjct 725 RVEVDVGTVAAMADSGLLERVLANLIDNALRYGEDSVIRVGAAAVGDRAVVTVADTGPGV 784 Query 796 PRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854 PRG E++FAPFQR GD D TTGVGLG+SV RGFV+AMGGTISATDTPGGGLT+V++LA Sbjct 785 PRGRAEEMFAPFQRLGDRDTTTGVGLGLSVVRGFVDAMGGTISATDTPGGGLTMVVELA 843 >gi|111018239|ref|YP_701211.1| histidine sensor kinase, two-component system [Rhodococcus jostii RHA1] gi|110817769|gb|ABG93053.1| histidine sensor kinase, two-component system [Rhodococcus jostii RHA1] Length=845 Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust. Identities = 574/830 (70%), Positives = 680/830 (82%), Gaps = 7/830 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 +RG+LRIYLGAAPGVGKT+AMLGEAHRR ERG DVVAAVVETHGR++TA L +E++PP Sbjct 16 RRGELRIYLGAAPGVGKTFAMLGEAHRRRERGCDVVAAVVETHGRDRTAAQLGDLELVPP 75 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 + + YRG ELDVEAVL R P +VLVDELAHTNTPGS + KRWQDV+ +L AGI V+S Sbjct 76 KLIAYRGTLGRELDVEAVLARRPALVLVDELAHTNTPGSVHEKRWQDVEILLAAGIDVLS 135 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 T+N+QHLE LNDVV++ITG+ Q+E +PDE+VRAA QVELVDITPEALRRRL+HGN+YAA+ Sbjct 136 TLNVQHLESLNDVVQRITGVVQQETVPDEVVRAATQVELVDITPEALRRRLSHGNIYAAD 195 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 +VDAALSNYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARERVVVAVTGG Sbjct 196 KVDAALSNYFRKGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARERVVVAVTGG 255 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 ESETLVRRA RIAS+SSAEL+VVHV+RGDGLAGVSAP++G+VR LA S+GA++H+VVGD Sbjct 256 LESETLVRRAGRIASRSSAELIVVHVVRGDGLAGVSAPEMGKVRTLAASIGASLHSVVGD 315 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPT LLDFAR NATQLV+GTSRRSRWAR+FDEGIGA + + G IDVHMVTH + R Sbjct 316 DVPTTLLDFARTANATQLVLGTSRRSRWARIFDEGIGASVLHQSGSIDVHMVTHGESHRP 375 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S V R R +W+AA++VPSV + ++ +DR++G+ GE ALFFI VL+V+LLGGV Sbjct 376 RRLSPVGSRSRTAIAWIAAVLVPSV-ATLVMSAVDRWLGLVGEGALFFIVVLLVSLLGGV 434 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 APAA SAL+SG+ LNYF T P ++TIAEPD +T VLL +AVAVAVLVD AA R+REA Sbjct 435 APAAFSALISGLFLNYFFTPPVRSFTIAEPDNFITTVVLLVVAVAVAVLVDAAAKRSREA 494 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 RRASQEAELLALFAGSVLRGADL TLL++VRETY Q +V++L +G V VG + Sbjct 495 RRASQEAELLALFAGSVLRGADLGTLLEKVRETYGQDSVSVLHRDRGP-----VGSVGPH 549 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 P VD ADT EVG+ E+ + + G +L ARDRRVL AVA QA G+++Q ELA+EAGQA+ Sbjct 550 PPVSVDDADTVCEVGEGEYALALRGSELHARDRRVLLAVANQAVGMIRQTELAQEAGQAQ 609 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 A+A AD LRRSLLSAVSHDLRTPLAA K A SSLR++DV FSPEDTAELLATIEES D L Sbjct 610 ALAEADRLRRSLLSAVSHDLRTPLAAVKAAASSLRSDDVDFSPEDTAELLATIEESADVL 669 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 T+LV NLLDSSRLAAGV+ P LR YL+E V RALV +G G R+ +RV+VDVG Sbjct 670 TSLVGNLLDSSRLAAGVVTPTLRPVYLDEVVHRALVGLGIGGRTGTRAR-ERVEVDVGTV 728 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 AMAD+GLLERVLANLIDNALRY D V+RV A V +R ++ V D GPG+PRG +++F Sbjct 729 AAMADSGLLERVLANLIDNALRYGEDSVIRVGAAAVGDRAVVTVADTGPGIPRGRADEMF 788 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854 APFQR GD D TTGVGLG+SV RGFV+AMGGTISATDTPGGGLT+V++LA Sbjct 789 APFQRLGDRDTTTGVGLGLSVVRGFVDAMGGTISATDTPGGGLTMVVELA 838 >gi|229493133|ref|ZP_04386925.1| sensor protein KdpD [Rhodococcus erythropolis SK121] gi|229319864|gb|EEN85693.1| sensor protein KdpD [Rhodococcus erythropolis SK121] Length=846 Score = 1031 bits (2665), Expect = 0.0, Method: Compositional matrix adjust. Identities = 570/831 (69%), Positives = 671/831 (81%), Gaps = 8/831 (0%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKT+AMLGEAHRR +RG DVVAAVVETHGR +TA + +E +PP Sbjct 16 KRGELRIYLGAAPGVGKTFAMLGEAHRRRDRGCDVVAAVVETHGRARTAAQIGDLETVPP 75 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 + V+YRG R PELDVEAVL R P +VLVDELAHTNTPGSKN KRWQDVQE+L+AGI V+S Sbjct 76 KLVDYRGTRMPELDVEAVLARRPALVLVDELAHTNTPGSKNHKRWQDVQELLEAGIDVLS 135 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV ITG+ Q+E +PD +VR+A QVELVDITPEALRRRL+HGNVY+ E Sbjct 136 TVNVQHLESLNDVVAHITGVVQQETVPDAVVRSAAQVELVDITPEALRRRLSHGNVYSPE 195 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 RVDAAL NYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARERVVVAVTGG Sbjct 196 RVDAALGNYFRRGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARERVVVAVTGG 255 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHV+RGDGL GVSAP++G+VR LA +GAT+HTVVGD Sbjct 256 PESETLVRRASRIASKSSAELMVVHVVRGDGLTGVSAPEMGKVRALAVGVGATLHTVVGD 315 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVP+ LL+FARE NATQLV+GTSRRSR AR+ DEGIGA VQ+ GGIDVHMVTH A+ Sbjct 316 DVPSTLLEFAREENATQLVLGTSRRSRLARILDEGIGAAVVQQSGGIDVHMVTHEEATAR 375 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S + ER + SW+AA+VVPS+ AI + +DR G+ GE+ALFF+ V++VALLGGV Sbjct 376 RRISVLGRSERRVLSWIAAIVVPSLAAAI-MGLVDRISGVNGENALFFVVVVLVALLGGV 434 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 PA LSAL+SG+LLNYF T+PRY++TIAEPD +T VLL +AVAVAVLVD AA R REA Sbjct 435 GPAILSALISGLLLNYFFTDPRYSFTIAEPDNFITTVVLLIVAVAVAVLVDAAAKRAREA 494 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 +RAS+EAELL LFAGSVLRGADL+TLL + E Y QR V+++ G +A VGT Sbjct 495 KRASEEAELLTLFAGSVLRGADLSTLLAKALEIYRQRGVSVIHHDDG-----VIAAVGTQ 549 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 P D ADT EV D E+ +L+AG L+ARDRRVLT VA QA G+++Q +L EA +A Sbjct 550 PPTTDDEADTVCEVNDGEYALLLAGPDLSARDRRVLTVVAHQAVGMIRQEKLTVEASKAA 609 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 A+ AD+LRR+LLSAVSHDLRTPLA K AVSSLR++D+ FSPEDTAELLATIEES DQL Sbjct 610 ALTEADQLRRALLSAVSHDLRTPLAGVKAAVSSLRSDDIEFSPEDTAELLATIEESADQL 669 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 TALV NLLDSSRLAAGV++P LR YL+E V RAL+ +G G R+ V VDVG Sbjct 670 TALVGNLLDSSRLAAGVVKPTLRPVYLDEVVHRALLGLGIGGRSDSRA--RSVVVDVGTV 727 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 AD GLLERV+AN++DNALRY + VRV A ++ +RV+I+V D GPGVPRG E +F Sbjct 728 AVQADQGLLERVIANIVDNALRYGGETPVRVGAAQLGDRVVISVADTGPGVPRGEAETMF 787 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAA 855 PFQR GD DNT GVGLG+SV RGFV+AMGGT+SATDTPGGGLT++++LAA Sbjct 788 QPFQRMGDRDNTGGVGLGLSVVRGFVDAMGGTVSATDTPGGGLTMIVELAA 838 >gi|226307210|ref|YP_002767170.1| turgor pressure sensor kinase [Rhodococcus erythropolis PR4] gi|226186327|dbj|BAH34431.1| turgor pressure sensor kinase [Rhodococcus erythropolis PR4] Length=846 Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust. Identities = 568/831 (69%), Positives = 667/831 (81%), Gaps = 10/831 (1%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRG+LRIYLGAAPGVGKT+AMLGEAHRR +RG DVVAAVVETHGR +TA + +E+IPP Sbjct 16 KRGELRIYLGAAPGVGKTFAMLGEAHRRRDRGCDVVAAVVETHGRARTAAQIGDLEIIPP 75 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 + V+YRG R PELDVEAVL R P +VLVDELAHTNTPGSKN KRWQDVQE+L+AGI V+S Sbjct 76 KLVDYRGTRMPELDVEAVLARRPALVLVDELAHTNTPGSKNHKRWQDVQELLEAGIDVLS 135 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV ITG+ Q+E +PD IVR+A QVELVDITPEALRRRL+HGNVY+ E Sbjct 136 TVNVQHLESLNDVVAHITGVVQQETVPDAIVRSAAQVELVDITPEALRRRLSHGNVYSPE 195 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 RVDAAL NYFR GNLTALRE+ALLW+ADQVDAAL KYRA+ KIT TWEARERVVVAVTGG Sbjct 196 RVDAALGNYFRRGNLTALRELALLWVADQVDAALAKYRAENKITDTWEARERVVVAVTGG 255 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIASKSSAELMVVHV+RGDGL GVSAP++G+VR LA +GAT+HTVVGD Sbjct 256 PESETLVRRASRIASKSSAELMVVHVVRGDGLTGVSAPEMGKVRALAVGVGATLHTVVGD 315 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVP+ LL+FARE NATQLV+GTSRRSR AR+ DEGIGA VQ+ GGIDVHMVTH + Sbjct 316 DVPSTLLEFAREENATQLVLGTSRRSRLARILDEGIGAAVVQQSGGIDVHMVTHEETTVR 375 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 S E + SW+AA+VVP+ + + +DR G+ GE+ALFF+ V++VALLGGV Sbjct 376 RRISLFGRSEYRLLSWIAAVVVPTAAAGL-MGLIDRISGVQGENALFFVVVVLVALLGGV 434 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 PA LSALLSG+LLNYF T+PRY++TIAEPD +T VLL +AVAVAVLVD AA + REA Sbjct 435 GPAMLSALLSGLLLNYFFTDPRYSFTIAEPDNFITTVVLLIVAVAVAVLVDAAAKKAREA 494 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 +RAS+EAELL LFAGSVLRGADL+TLL++ RE Y QR V+++ G VA VG Sbjct 495 KRASEEAELLTLFAGSVLRGADLSTLLEKAREIYRQRGVSVVHHEDG-----VVAAVGAE 549 Query 565 -PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQA 623 P R+ D AD+ EV D E+ ++++G +L+ARDRRVLT VA QA G+++Q +L EA +A Sbjct 550 PPAREAD-ADSVCEVNDGEYALMLSGPELSARDRRVLTVVAHQAVGMIRQDKLTVEASKA 608 Query 624 EAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQ 683 A+ AD+LRR+LLSAVSHDLRTPLA K AVSSLR++D+ FSPEDTAELLATIEES DQ Sbjct 609 AALTEADQLRRALLSAVSHDLRTPLAGVKAAVSSLRSDDIEFSPEDTAELLATIEESADQ 668 Query 684 LTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGD 743 LTALV NLLDSSRLAAGV++P LR YL+E V RAL+ +G G RS V VDVG Sbjct 669 LTALVGNLLDSSRLAAGVVKPTLRAVYLDEVVHRALLGLGIGGRSDSRS--HSVIVDVGT 726 Query 744 AVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQL 803 AD GLLERV+ANL+DNALRY VRV A RV +R +I V D GPGVPRG E + Sbjct 727 VAVQADQGLLERVIANLVDNALRYGGTTPVRVGAARVGDRTVITVADTGPGVPRGEAESM 786 Query 804 FAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854 F PFQR GD DNT GVGLG+SV RGFV+AMGGT+SATDTPGGGLT++++LA Sbjct 787 FEPFQRMGDRDNTGGVGLGLSVVRGFVDAMGGTVSATDTPGGGLTMMVELA 837 >gi|169630332|ref|YP_001703981.1| sensor protein KdpD [Mycobacterium abscessus ATCC 19977] gi|169242299|emb|CAM63327.1| Sensor protein KdpD [Mycobacterium abscessus] Length=835 Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust. Identities = 524/837 (63%), Positives = 634/837 (76%), Gaps = 16/837 (1%) Query 26 RGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPR 85 RG LRIYLGAAPGVGKT+AML EAHRR RGTDVVAAVVETHGR+KTA+LL+G+E+IPP+ Sbjct 8 RGTLRIYLGAAPGVGKTFAMLNEAHRRAGRGTDVVAAVVETHGRSKTAELLDGLELIPPK 67 Query 86 YVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIST 145 + +RG ELDV+AVL R P +VL+DE+AHTN PGS+NPKRWQD+ EILDAGI V++T Sbjct 68 EMVHRGTAMYELDVDAVLERRPALVLIDEMAHTNVPGSRNPKRWQDIDEILDAGIDVLTT 127 Query 146 VNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAER 205 +N+QHLE LNDVVEQITGI Q+E +PD +VR A+QVELVDITPEALRRR+ HGNVYA E+ Sbjct 128 INVQHLESLNDVVEQITGIVQRETVPDAVVRRAEQVELVDITPEALRRRMVHGNVYAPEK 187 Query 206 VDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGP 265 V +ALSNYFRTGNLTALRE+ALLWLADQVDAAL KYR+D +IT TWEARERVVVAVTGGP Sbjct 188 VGSALSNYFRTGNLTALRELALLWLADQVDAALAKYRSDNRITKTWEARERVVVAVTGGP 247 Query 266 ESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGDD 325 ESETLVRRASRIA+KSSAEL+VVHV+RGDGL G S + RVR LA +GA++ V GDD Sbjct 248 ESETLVRRASRIAAKSSAELLVVHVVRGDGLVGASTAVMTRVRRLANDIGASVQAVTGDD 307 Query 326 VPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAAS-RA 384 VP LLDFAR +NATQLV+GTSRRSRWAR+ DEG+ A +++ G IDVHMVTH S R Sbjct 308 VPQTLLDFARGVNATQLVLGTSRRSRWARILDEGVAAAVIRDSGAIDVHMVTHGHTSGRL 367 Query 385 SGWSRVSP-RERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGG 443 WS R+R I +WLAA++VP A+ + + D G+G +SALF I VL V+LLGG Sbjct 368 RSWSVPQDGRKRLIINWLAAILVPPA-TALFIHFFDTAFGVGSKSALFLIAVLGVSLLGG 426 Query 444 VAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTRE 503 V+ A +SA++SG+LLN+ PRY++TI E D A+T +++ AVAVA LVD AA+R R+ Sbjct 427 VSTALVSAVISGLLLNFLFVAPRYSFTIGETDNALTILMMMVTAVAVAALVDAAATRARQ 486 Query 504 ARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGT 563 ARRAS+EAELLALFAG VL +DL+ LL+RVR TY+Q AV++L + G VA VG Sbjct 487 ARRASREAELLALFAGGVLVNSDLSALLERVRTTYNQTAVSLL-----CAEGPAVASVGE 541 Query 564 NPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQA 623 +P AD+ V D + + + G + + D RVL VA A GLV+ LAEEA QA Sbjct 542 DPPTRESEADSVFRVDDGAYALALNGPPVPSSDARVLQVVAGTAVGLVRSARLAEEASQA 601 Query 624 EAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQ 683 A+A AD LRR+LLSAVSHDLRTPLAA K AVSSLR+ D+ FSPEDTAELLAT+EES DQ Sbjct 602 SALAEADRLRRALLSAVSHDLRTPLAAVKAAVSSLRSPDIEFSPEDTAELLATVEESADQ 661 Query 684 LTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGD 743 LTALV NLLDSSRLAAGV++P+ Y++E QRAL+ GAT R RV +D+G Sbjct 662 LTALVGNLLDSSRLAAGVVKPRAVPVYVDEIAQRALL----GATENDRK---RVHLDLGG 714 Query 744 AVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQL 803 AV AD GLLERVLANL+DNALRY+ VRV+ V +R L+ V D G G+ Sbjct 715 AVVRADPGLLERVLANLVDNALRYS-QGEVRVSHEEVDDRTLVIVADHGKGLEASKRGAA 773 Query 804 FAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPEDRP 860 F FQR GD DNT GVGLG+SV +GFVEAM GT++ATDT GGGLT+++DL + P Sbjct 774 FDAFQRLGDRDNTVGVGLGLSVVKGFVEAMEGTVNATDTAGGGLTMIVDLPSAGSAP 830 >gi|317506418|ref|ZP_07964223.1| osmosensitive K+ channel His kinase sensor domain-containing protein [Segniliparus rugosus ATCC BAA-974] gi|316255298|gb|EFV14563.1| osmosensitive K+ channel His kinase sensor domain-containing protein [Segniliparus rugosus ATCC BAA-974] Length=856 Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 508/839 (61%), Positives = 615/839 (74%), Gaps = 29/839 (3%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRGQLRIYLGAAPGVGKTYAML EAHRR ERG DVV AVV THGR +TA+LL+G+E++P Sbjct 18 KRGQLRIYLGAAPGVGKTYAMLAEAHRRQERGADVVVAVVATHGREQTAELLDGLEVVPS 77 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 + YRGA E+D+ VLRR P++ LVDELAHTN PGS N KRWQDVQ +L+AG+ V+S Sbjct 78 LELPYRGAVLEEMDLAGVLRRAPELALVDELAHTNAPGSANEKRWQDVQALLEAGVDVLS 137 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITG+ Q E +PD VR+A Q+ELVDITPEALR R++HGN+YA E Sbjct 138 TVNVQHLESLNDVVAQITGVTQHETVPDVFVRSAAQIELVDITPEALRARMSHGNIYAQE 197 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 +V+AAL NYFR GNLTALRE+ALLWLADQVDAAL KYR D +IT WE RERV+V+VTGG Sbjct 198 KVEAALRNYFRAGNLTALRELALLWLADQVDAALAKYRQDHRITDVWETRERVIVSVTGG 257 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PES TL+RRA RIASKS AELMV+H++RGDGLA V+ +LGR+RE A S+GA++HTVVGD Sbjct 258 PESPTLIRRARRIASKSGAELMVLHIVRGDGLASVAEAELGRLREFAASVGASLHTVVGD 317 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVP LL+FAR +NATQLV+GTSRRSR+A+ F EGIG R V+E G IDVHMVTH A R Sbjct 318 DVPMTLLEFARGVNATQLVLGTSRRSRFAQFFSEGIGMRVVRESGKIDVHMVTHEEAGRR 377 Query 385 SGWSRVSPRE--RHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLG 442 W PR R ASW AA+V P V+ A+ + F+ +A+FF VL+V+LLG Sbjct 378 RSW---RPRTGGRLKASWAAAIVAPPVVAAL-LKLAGGFIDFTSATAVFFAVVLMVSLLG 433 Query 443 GVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTR 502 GVAPAA SA++SG LLNY P ++ + P +T V++ + VAVA LVD A SR R Sbjct 434 GVAPAACSAIISGFLLNYLFAPPLLSFAVKSPGQIITIIVMVGLGVAVAALVDSATSRAR 493 Query 503 EARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVG 562 EAR A++EAELL LFAG VLRGAD++ LL +VRETY+ RAV+++R G V+ G Sbjct 494 EARHAAKEAELLTLFAGVVLRGADVSELLAKVRETYALRAVSLVR------AGAVVSSAG 547 Query 563 TNPCRDVDSADTAIEVGDDEFWMLMAG-RKLAARDRRVLTAVATQAAGLVKQRELAEEAG 621 +P +A TA++ D E +L+ G R A RDRRVL AVA QAA LV+Q +LA EA Sbjct 548 EDPPTSAVAAQTAVDSPDGESTLLLDGPRTFAGRDRRVLEAVAAQAAALVRQADLAGEAA 607 Query 622 QAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESI 681 +A+ +A AD LRR+LLSAVSHDLRTPLAA K AVSSLR++DV FSPED AELLATIEES Sbjct 608 KADGLAEADRLRRALLSAVSHDLRTPLAAVKAAVSSLRSQDVEFSPEDVAELLATIEESA 667 Query 682 DQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDV 741 DQLTALV NLLDSSRLAAGVI PQ +R Y++E RA++S+ A RV+V Sbjct 668 DQLTALVGNLLDSSRLAAGVIAPQRKRVYVDEVAHRAILSLPASAR-------KRVQVTP 720 Query 742 GDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEE 801 +AD GLLERVLANLIDNALRYAPD V V++ R V+I+V+D GPG+ E Sbjct 721 DVNAVIADLGLLERVLANLIDNALRYAPDSQVTVHSEREEGEVVISVVDHGPGIRSDQRE 780 Query 802 QLFAPFQR---------PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVI 851 + F F R GD DNT GVGLG+SV RGF EAMGG + +TPGGG T+ + Sbjct 781 RAFEAFGRLHAASSSDGRGDRDNTVGVGLGLSVVRGFAEAMGGQVVVAETPGGGATLQV 839 >gi|54023537|ref|YP_117779.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] gi|54015045|dbj|BAD56415.1| putative two-component system sensor kinase [Nocardia farcinica IFM 10152] Length=828 Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust. Identities = 527/831 (64%), Positives = 626/831 (76%), Gaps = 19/831 (2%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 +RG+LRIYLGAAPG GKTYAMLGEA RR+ RG DVV A+V THGR +T + L G+E++PP Sbjct 10 RRGRLRIYLGAAPGAGKTYAMLGEAQRRIARGGDVVVAIVNTHGRPRTEEQLAGLEVVPP 69 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R + YRG F ELD++AVL R P V LVDELAHTN PGS++ KRWQDV E+L AGI V+S Sbjct 70 RRITYRGVEFEELDLDAVLARRPAVALVDELAHTNVPGSRHAKRWQDVAELLAAGIDVLS 129 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVNIQHLE L DVVEQITG+ Q+E+IPD +VR A+Q+ELVDITP+ALRRRLAHGNVYA E Sbjct 130 TVNIQHLESLADVVEQITGVAQRERIPDAVVRRAEQIELVDITPQALRRRLAHGNVYAPE 189 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 +VDAAL NYFR GNLTALREIALLWLADQVD AL KYR + IT TWEARERVVVAVTGG Sbjct 190 KVDAALRNYFREGNLTALREIALLWLADQVDLALAKYRGEHAITDTWEARERVVVAVTGG 249 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETLVRRASRIA+K+ A+L+VVHV+RGDGL + P++G VRELA LGA +H+VVGD Sbjct 250 PESETLVRRASRIAAKAGADLLVVHVVRGDGL---TTPEMGAVRELAAGLGADVHSVVGD 306 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVP LLDFAR++NATQLVVGTSRRSRWAR+ DEGIGA V++ G IDVHMVTH R Sbjct 307 DVPATLLDFARQVNATQLVVGTSRRSRWARILDEGIGAAVVRDSGKIDVHMVTHEHRVRG 366 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGV 444 + + +R A+WLAA ++P A+ A + R G G +ALFF+ VL VAL GGV Sbjct 367 PRPALLGRHDRRPAAWLAAFLIPVAATAVMAAIV-RLTGTAGLNALFFVAVLAVALFGGV 425 Query 445 APAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREA 504 PA ++ALLSG+LLNYF TEP Y+ TIAEP VT VLL +AVAVA LVD AA+R REA Sbjct 426 GPAIVAALLSGLLLNYFFTEPLYSLTIAEPANFVTTVVLLVVAVAVAALVDTAAARAREA 485 Query 505 RRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTN 564 A++EAELLALFAG+VLRGAD+ LL++VRETY+QR V++ VR E + G Sbjct 486 GSAAREAELLALFAGAVLRGADVPALLEKVRETYAQRGVSL--VRLDGDRVEVLGTAGAE 543 Query 565 PCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAE 624 P +ADT +V D + +L+AG +L RDRRVLTAVA QAAGLV+QRELA EA +A Sbjct 544 PPSTPAAADTRGDVEDSPYALLLAGPRLRPRDRRVLTAVAGQAAGLVRQRELAAEAARAA 603 Query 625 AIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQL 684 +A D LRR LLSAVSHDLRTPLAA K A + LR+ DV FSPEDTAELLATIEES DQL Sbjct 604 MLAETDRLRRLLLSAVSHDLRTPLAAVKAAAAGLRSTDVEFSPEDTAELLATIEESTDQL 663 Query 685 TALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDA 744 T LV NLLDSSRLAAGV+ P+ R Y++E V AL+S+G A +R+ +++GD Sbjct 664 TRLVTNLLDSSRLAAGVVTPEPRPVYVDEVVHSALLSLGVDAG-------ERLTLELGDT 716 Query 745 VAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLF 804 + ADA LLERVLANL+DNALRYAPD +RV A ER + V D GPG+ G Sbjct 717 LVRADATLLERVLANLLDNALRYAPDGPIRVCATNSGERTTVTVADHGPGLDSGVTA--- 773 Query 805 APFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAA 855 F R GD T G GLG+ VARGFVEAMGGT++A +TPGGG T++IDL A Sbjct 774 --FPRTGDQ-RTGGAGLGLVVARGFVEAMGGTLTAAETPGGGTTMIIDLPA 821 >gi|118469431|ref|YP_889615.1| sensor protein KdpD [Mycobacterium smegmatis str. MC2 155] gi|118170718|gb|ABK71614.1| sensor protein KdpD [Mycobacterium smegmatis str. MC2 155] Length=831 Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust. Identities = 510/842 (61%), Positives = 625/842 (75%), Gaps = 27/842 (3%) Query 22 VTTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEM 81 ++ K G LRIYLGAAPGVGKTY+ML EAHRR+ERGTDVVAA+V+THGR K +LL I++ Sbjct 4 LSRKVGDLRIYLGAAPGVGKTYSMLAEAHRRMERGTDVVAAMVDTHGRRKVGQLLASIDV 63 Query 82 IPPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGIT 141 IPP VE+ G + E+DV A+L R P+VVLVD+LAHTN PGS+NPKRWQDV+E+L+AGIT Sbjct 64 IPPLIVEHEGTEYQEIDVPALLMRRPKVVLVDDLAHTNAPGSRNPKRWQDVEELLNAGIT 123 Query 142 VISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVY 201 VISTVNIQ+LE + D+ QITG+++ ++IPDE+VRAADQ+ELVDITPEALRRRLAHGN+Y Sbjct 124 VISTVNIQNLESVADLAGQITGVDEPDRIPDEVVRAADQIELVDITPEALRRRLAHGNIY 183 Query 202 AAERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAV 261 ERVDAALSNYFR NLTALR++ALLWLADQVDAALEKYR+ KI TW+ RERVVV V Sbjct 184 PRERVDAALSNYFRPENLTALRQLALLWLADQVDAALEKYRSANKIPDTWKPRERVVVGV 243 Query 262 TGGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTV 321 TGGP SET VRRAS IAS++ A+L VVHV+RGDGL SA Q +R+LA SLGAT+HTV Sbjct 244 TGGPGSETQVRRASLIASRTGADLKVVHVVRGDGLTVTSAQQKRVLRDLAASLGATLHTV 303 Query 322 VGDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAA 381 +GDDV L+DFAR++NATQLVVGTSRRSR AR FDEGI A VQ G +DVH+VTH A Sbjct 304 IGDDVAATLIDFARDVNATQLVVGTSRRSRLARFFDEGITATVVQRSGPLDVHVVTHEEA 363 Query 382 SRASGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALL 441 RV P + WLAA+ +P ICA+ +A +G+G ++ALF GVL++ALL Sbjct 364 GTGISKPRVGPGA-SVTGWLAAVALPPAICALLLAV--PPLGVGTQTALFVAGVLMIALL 420 Query 442 GGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRT 501 GG+A AALSA+LSG+L+ YFL EPR ++ +A D+A+T VLL +A+AVA LVD A + Sbjct 421 GGIARAALSAVLSGVLITYFLIEPRNSFAVAGADSALTTGVLLGLAIAVAGLVDQTARHS 480 Query 502 REARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACV 561 R ARRASQ AELLALFA VLR AD LL+RVRETY+QR+V++LR R TGE +A Sbjct 481 RAARRASQNAELLALFADGVLRDADPGALLERVRETYAQRSVSLLRGR----TGEVLAHA 536 Query 562 GTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAG 621 G NPC D+D ADT IE+GDDE+W+L+AG L + DRRVL AVA QA LVK+R A+EA Sbjct 537 GANPCTDIDEADTTIEIGDDEYWLLLAGPDLTSHDRRVLNAVAEQAVSLVKKRRQADEAI 596 Query 622 QAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESI 681 + + A++LR S+ SA++H+LRTPL AK A++ ++ P+DT ELLA E+S+ Sbjct 597 KFD--TEAEKLRSSIQSAITHNLRTPLVTAKAAIAGAAHDNP--PPDDTVELLAAAEKSV 652 Query 682 DQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDV 741 D+L+ LV NLLDSS LA G IRP+LR L +AV+ L IG A RV VDV Sbjct 653 DELSVLVVNLLDSSCLATGAIRPELRPVDLRDAVEHVLRDIGPDAR--------RVHVDV 704 Query 742 GDAVAMADAGLLERVLANLIDNALRYA-PD-------CVVRVNAGRVRERVLINVIDEGP 793 +AD LL RVL NL+ N+LRY PD VVRV AG+V +RVLI V+D GP Sbjct 705 DGTPVLADGELLGRVLGNLLTNSLRYGDPDGDSAGDSGVVRVTAGQVDDRVLIAVVDSGP 764 Query 794 GVPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDL 853 G+PRG+E + FAPFQR G D GVGLG+ VA G VEAMGG IS T+TPGGGLTV IDL Sbjct 765 GIPRGSEHEAFAPFQRLGRDDANIGVGLGLPVASGLVEAMGGKISMTETPGGGLTVEIDL 824 Query 854 AA 855 A Sbjct 825 PA 826 >gi|262203939|ref|YP_003275147.1| osmosensitive K channel His kinase sensor [Gordonia bronchialis DSM 43247] gi|262087286|gb|ACY23254.1| Osmosensitive K channel His kinase sensor [Gordonia bronchialis DSM 43247] Length=845 Score = 907 bits (2345), Expect = 0.0, Method: Compositional matrix adjust. Identities = 493/829 (60%), Positives = 611/829 (74%), Gaps = 15/829 (1%) Query 29 LRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPRYVE 88 L ++LG APGVGKTY ML A ++ G+DVV AVVE+HGR+ TA L+EG+E++ V Sbjct 16 LEVFLGCAPGVGKTYEMLATARGLIDEGSDVVVAVVESHGRSATAALVEGLEVVERTSVA 75 Query 89 YRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVISTVNI 148 YR A E+D+EAVL RHPQV LVDE+AHTN PG +N KRWQD++ + DAGI V++T+NI Sbjct 76 YRDATLEEMDLEAVLERHPQVALVDEMAHTNAPGLRNTKRWQDIEVLRDAGIDVLTTINI 135 Query 149 QHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAERVDA 208 QHLE LNDVV QITG+ Q+E +PDE VRAADQ+ELVDI P+ALR+RL G VY R+D Sbjct 136 QHLESLNDVVAQITGVTQRETVPDEAVRAADQIELVDIDPQALRQRLTAGKVYPGRRIDG 195 Query 209 ALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGPESE 268 AL+NYFR GNLTALRE+ALLWLAD+VD L YRA ITATWEARERVVVA+TGGPES Sbjct 196 ALTNYFRQGNLTALRELALLWLADRVDDTLADYRAANAITATWEARERVVVAITGGPESA 255 Query 269 TLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGDDVPT 328 L+RRASRIAS+SSAEL+VVHV+RGDGLA + + +R+LA GA +HTVVGDDVP Sbjct 256 ALIRRASRIASRSSAELVVVHVVRGDGLAQRTPIDMTALRDLAAGFGAKIHTVVGDDVPA 315 Query 329 ALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRASGWS 388 LL+FAR +NATQLV+GTSRR RW R+ DEG+GA V+E G IDVHMVTH R Sbjct 316 TLLEFARGVNATQLVLGTSRRPRWQRILDEGVGATVVRESGRIDVHMVTHEETRRRHRLD 375 Query 389 RVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGVAPAA 448 R SW AA++VP + I + LD ++G ESALFF+ VL V++LGG+APA Sbjct 376 IRETRFHRPLSWAAAVLVPLAVTGI-LMLLDPWLGFSSESALFFVAVLAVSMLGGIAPAV 434 Query 449 LSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREARRAS 508 LSA++SG+LLNYFLT PRYT+TI EPD +T V+L +A+AVAVLVD A R +A+RA Sbjct 435 LSAVVSGLLLNYFLTNPRYTFTIDEPDNLITIMVMLMIAIAVAVLVDSATVRRAQAQRAG 494 Query 509 QEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTML-RVRQGASTGETVACVGTNPCR 567 ++AELL+LF+ +VL GAD+ LL++VRETY QR VT++ R ++GA E+ VGT P Sbjct 495 RDAELLSLFSTTVLGGADVPALLEKVRETYDQRGVTLIRRPKRGAPVIES--KVGTEPPA 552 Query 568 DVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAIA 627 D +A T V EF M + G +L RDRRVLT+VATQAAG V++R+L EA +A A+A Sbjct 553 DEQAATTVCPVPGGEFEMWLTGPELGGRDRRVLTSVATQAAGAVQRRQLESEAAEAAALA 612 Query 628 RADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTAL 687 + DELRR+LLSAVSHDLRTPLAAAK AVSSLR+ DV FSPEDT ELLATIEES DQL+AL Sbjct 613 QTDELRRALLSAVSHDLRTPLAAAKAAVSSLRSTDVTFSPEDTEELLATIEESTDQLSAL 672 Query 688 VANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDR--VKVDVGDAV 745 V NLLDSSRLAAGV+RP+LRR YL E + RAL ++ R +D V VD+ Sbjct 673 VGNLLDSSRLAAGVVRPELRRTYLAEVIHRALYAVD-------RRSVDTPDVTVDLQQEW 725 Query 746 AMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGTEEQLFA 805 A DAGLLER LANL+DNA+R+ D VRV A R +I VID G G+P E++F Sbjct 726 AYTDAGLLERALANLVDNAVRHGGDE-VRVQARPDGTRCVIRVIDHGRGIPPEQRERVFT 784 Query 806 PFQRPGDHD-NTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDL 853 FQ+ GD + ++TGVGLG+SVA+GFV A+GG+IS + TPGGG T+ + L Sbjct 785 AFQQYGDRNGSSTGVGLGLSVAQGFVRAVGGSISVSGTPGGGTTMEVSL 833 >gi|343927313|ref|ZP_08766789.1| turgor pressure sensor kinase KdpD [Gordonia alkanivorans NBRC 16433] gi|343762806|dbj|GAA13715.1| turgor pressure sensor kinase KdpD [Gordonia alkanivorans NBRC 16433] Length=833 Score = 875 bits (2261), Expect = 0.0, Method: Compositional matrix adjust. Identities = 490/838 (59%), Positives = 602/838 (72%), Gaps = 18/838 (2%) Query 29 LRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPRYVE 88 ++++LG APGVGKTY ML +A + G DVV AVVE+HGR TA L+EG+E+IP + Sbjct 1 MQVFLGCAPGVGKTYEMLAQARNLRDEGADVVVAVVESHGRPATAALVEGLEVIPRIALP 60 Query 89 YRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVISTVNI 148 YRGA F E+D++AVL RHPQVVLVDELAHTNTPGS+N KRWQD++E+ DAGI V STVNI Sbjct 61 YRGATFDEMDLDAVLARHPQVVLVDELAHTNTPGSRNAKRWQDIEELRDAGIDVCSTVNI 120 Query 149 QHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAERVDA 208 QHL LNDVV QITG+ Q+E +PD++VR ADQ+ELVDI P+ALR+RL+ G VY RVD Sbjct 121 QHLASLNDVVAQITGVVQRETVPDDVVRGADQIELVDIDPQALRQRLSAGKVYPYSRVDG 180 Query 209 ALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGPESE 268 AL NYFR GNLTALRE+ALLWLADQVD L YRA IT TWEARERVVVA+TGGPES Sbjct 181 ALGNYFRQGNLTALRELALLWLADQVDDKLADYRAAHSITDTWEARERVVVAITGGPESP 240 Query 269 TLVRRASRIASKSSAELMVVHVIRGDGLA--GVSAPQLGRVRELATSLGATMHTVVGDDV 326 TL+RRASRIAS+SSAEL+ VHV+RGDGL+ GV L +RELA GA +HTVVGDD+ Sbjct 241 TLLRRASRIASRSSAELLAVHVVRGDGLSDRGV---DLTALRELAAGFGARIHTVVGDDI 297 Query 327 PTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRASG 386 P LL FAR +NATQLV+GTSRR RW R+FDEG+GA V G IDVHMVTH R Sbjct 298 PATLLVFARGVNATQLVLGTSRRPRWQRIFDEGVGATVVSGSGRIDVHMVTHEETPRRHR 357 Query 387 WSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGVAP 446 R SW+ A+VVP V + + LD ++G +SALFF+ VL V++LGG+AP Sbjct 358 LDIRDTRFHRPLSWVLAVVVPLVATGV-LRLLDPWLGFTSQSALFFVSVLAVSMLGGIAP 416 Query 447 AALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREARR 506 AALSA++SG+LLNYF T+PR+T+TI +PD +T V+L +A+AVA LVD A R +A+ Sbjct 417 AALSAVVSGLLLNYFFTDPRFTFTIDQPDNLITILVMLLIAIAVAALVDSATVRRAQAQE 476 Query 507 ASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVACVGTNPC 566 A++EAELLA+F+ VL GAD+ LL+R+RETY Q AV ++R R +T A VG P Sbjct 477 ATREAELLAMFSSVVLGGADVPGLLERLRETYDQTAVALVR-RTSKTTRTVEAWVGDCPL 535 Query 567 RDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAI 626 D ADT V +F +L+ G +L ARDRRVL AVA QAAG V++ L EA AEA+ Sbjct 536 NGPDDADTTCSVPGGQFELLLRGPRLGARDRRVLAAVAGQAAGAVERHALEVEAASAEAL 595 Query 627 ARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTA 686 AR DELRR+LLSAV HDLRTPLAAAK AVSSLR++DV FSP+DTAELLAT++ES+D L Sbjct 596 ARTDELRRALLSAVGHDLRTPLAAAKAAVSSLRSDDVTFSPDDTAELLATVDESVDHLAG 655 Query 687 LVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV-KVDVGDAV 745 LV NLLDSSRLAAG +RPQ++ +L E V RA A R D V +++G A Sbjct 656 LVGNLLDSSRLAAGAVRPQMQHTFLPEVVHRA-------AAEVQRLNPDLVLTIELGQAW 708 Query 746 AMADAGLLERVLANLIDNALRYAPDCV-VRVNA-GRVRERVLINVIDEGPGVPRGTEEQL 803 A D GLLER LANL+DNA R+ V + V+ G R +I V+D GPG+P EQ+ Sbjct 709 AYTDPGLLERALANLVDNAHRHGGSEVEITVSGTGDDPPRCVIRVVDHGPGLPTTDREQV 768 Query 804 FAPFQRPGDHDN-TTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPEDRP 860 FA F + GD ++GVGLG+SVA GF+ AMGG +SA DTPGGG T+V+DL D P Sbjct 769 FAAFHQGGDTAGASSGVGLGLSVAHGFISAMGGELSAGDTPGGGATLVVDLPTVADLP 826 >gi|296393294|ref|YP_003658178.1| osmosensitive K channel His kinase sensor [Segniliparus rotundus DSM 44985] gi|296180441|gb|ADG97347.1| Osmosensitive K channel His kinase sensor [Segniliparus rotundus DSM 44985] Length=856 Score = 856 bits (2211), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/839 (60%), Positives = 608/839 (73%), Gaps = 31/839 (3%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 KRGQLRIYLGAAPGVGKTYAML EAHR E GTDVV AVV THGR KTA LL+G+E++P Sbjct 18 KRGQLRIYLGAAPGVGKTYAMLAEAHRCQEAGTDVVVAVVATHGREKTAALLDGLEIVPA 77 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 V YRG E+D+ AVL R PQ+ LVDELAHTN PGS + KRWQDVQ +L+AGI V+S Sbjct 78 ARVSYRGTALEEMDLGAVLERAPQLALVDELAHTNAPGSAHEKRWQDVQVLLEAGIDVLS 137 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHLE LNDVV QITG Q+E +PD R+A QVELVDITPEALR R++HG +YA + Sbjct 138 TVNVQHLESLNDVVAQITGATQQETVPDVFARSAAQVELVDITPEALRARMSHGEIYAPD 197 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 +VDAAL NYFR GNLTALRE+ALLWLADQVDAAL KYR + +IT WE RERV+V+VTGG Sbjct 198 KVDAALRNYFRAGNLTALRELALLWLADQVDAALAKYRREHRITDVWETRERVIVSVTGG 257 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PES+TL+RRA RIAS+S AELMV+HV+RGDGLA + +LGR+RE + ++GA++HTVVGD Sbjct 258 PESQTLIRRARRIASRSGAELMVLHVVRGDGLASAAETELGRLREFSANVGASLHTVVGD 317 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVPT LL+FAR +NATQLV+GTSRRSR A+L DEGIG R V+E G IDVHMVTH A R Sbjct 318 DVPTTLLEFARAVNATQLVIGTSRRSRMAQLLDEGIGMRVVRESGKIDVHMVTHEEAGRR 377 Query 385 SGWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMG----IGGESALFFIGVLIVAL 440 R R SW A +V+ AWL G +A+FF VL+V+L Sbjct 378 RAL-RPGLRSTRKTSWSA-----AVLAPPAAAWLMELAGPAVDFTSATAVFFAVVLLVSL 431 Query 441 LGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASR 500 LGGVAPAA SA++SG+LLNYF P ++ + P VT FV++ + VAVA LVD A+SR Sbjct 432 LGGVAPAAFSAVVSGVLLNYFFAPPLRSFAVKSPGQVVTIFVMVGLGVAVAALVDFASSR 491 Query 501 TREARRASQEAELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVAC 560 R+AR+A+QEAELL LFAG+VLRGAD++ LL R +ETY RAV+++R +G+ V+C Sbjct 492 ARQARQAAQEAELLTLFAGAVLRGADVSELLARAKETYGLRAVSLVR------SGDVVSC 545 Query 561 VGTNPCRDVDSADTAIEVGDDEFWMLMAGRK-LAARDRRVLTAVATQAAGLVKQRELAEE 619 G + SA A++ D E +L+ G K A RDRRVL AVA QAA LV+Q +LA+E Sbjct 546 AGEDAPTSEASARAAVQSPDGECVLLLDGPKTFAGRDRRVLEAVAAQAAALVRQADLAQE 605 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A A+ +A AD+LRR+LLSAVSHDLRTPLAA K AVSSLR++DV FSPED ELLATIEE Sbjct 606 AALADGLAEADKLRRALLSAVSHDLRTPLAAVKAAVSSLRSDDVEFSPEDVGELLATIEE 665 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 S DQLTALV NLLDSSRLAAGV+ PQ RR Y++E RA++S+ RV+V Sbjct 666 SADQLTALVGNLLDSSRLAAGVLAPQRRRVYVDEVAHRAILSLPAPRRA-------RVQV 718 Query 740 DVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVPRGT 799 +AD GLLERVLANLIDNALRYAPD V V + R V+I+V+D GPG+ Sbjct 719 QPDVNAVLADPGLLERVLANLIDNALRYAPDSQVTVRSERQEGEVVISVVDHGPGIRADQ 778 Query 800 EEQLFAPFQR-------PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVI 851 E+ F PF R GD DN+ GVGLG+SV RGF E+MGG + T TPGGG T+ I Sbjct 779 RERAFEPFGRLSSAPDGRGDRDNSVGVGLGLSVVRGFAESMGGQVVVTQTPGGGATLQI 837 >gi|134102523|ref|YP_001108184.1| sensor histidine kinase [Saccharopolyspora erythraea NRRL 2338] gi|133915146|emb|CAM05259.1| sensor histidine kinase [Saccharopolyspora erythraea NRRL 2338] Length=879 Score = 827 bits (2135), Expect = 0.0, Method: Compositional matrix adjust. Identities = 472/854 (56%), Positives = 587/854 (69%), Gaps = 39/854 (4%) Query 23 TTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMI 82 + +RG+LRIYLGAAPGVGKTYAMLGEAHRR RGTDVV +VETH R KTA LL+G+E++ Sbjct 5 SARRGELRIYLGAAPGVGKTYAMLGEAHRRAARGTDVVVGLVETHAREKTAALLDGLEVV 64 Query 83 PPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITV 142 P R + +RG E+D++AVL R P+V +VDELAHTN PGS+N KRWQD+ E+LDAGI V Sbjct 65 PRRRIAHRGVEVTEMDLDAVLARRPEVAVVDELAHTNAPGSRNEKRWQDIDELLDAGINV 124 Query 143 ISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYA 202 +STVN+QHLE LNDVVE ITG+ Q+E +PDE+VR A Q+EL DITPEALRRR+AHGNVY+ Sbjct 125 LSTVNVQHLESLNDVVEAITGVRQQETVPDEVVRRAGQIELADITPEALRRRMAHGNVYS 184 Query 203 AERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVT 262 A+RVDAAL NYFRTGNLTALRE+ALLWLADQVD AL +YRA++KIT TWEARERVVV++T Sbjct 185 ADRVDAALGNYFRTGNLTALRELALLWLADQVDVALRRYRAERKITDTWEARERVVVSIT 244 Query 263 GGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVV 322 GGPESETL+RRA RIA+++ AEL VVHV+RGDGLAG S L R R LA +GA+ HTVV Sbjct 245 GGPESETLIRRARRIAARAGAELQVVHVLRGDGLAGASPGNLARARRLADGVGASFHTVV 304 Query 323 GDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAAS 382 GDDVP ALL+FAR +ATQLVVGTSRRSRWARL DEGIGA VQ+ G IDVHMVTHP A Sbjct 305 GDDVPEALLEFARGADATQLVVGTSRRSRWARLLDEGIGAAVVQKSGSIDVHMVTHPEAG 364 Query 383 RASGWSRVS----PRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIV 438 + ++ R + W+ AL +PS + A+ A+ M + + +F+ ++V Sbjct 365 GRRLFKNIARNPLSSARQLWGWVLALALPSAVTAL--AYFSGAMALSADVVGYFLATVVV 422 Query 439 ALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAA 498 AL+GG+APA +ALLSG LLN+FLT P Y+ TIAEP VT +L + + VA+LVD AA Sbjct 423 ALVGGMAPAITAALLSGGLLNFFLTPPLYSLTIAEPQNVVTLLAMLFVGLLVAILVDRAA 482 Query 499 SRTREARRASQEAELLALFAGSVLRGAD-LATLLQRVRETYSQRAVTMLRVRQGASTGET 557 A A EA LLA +A +VL D L LL++V E + + +L ++G Sbjct 483 RLAERAAHARTEAALLASYARTVLTHPDPLPRLLEKVVENFGLTSAALLERQEG--DWHV 540 Query 558 VACVGTNPCRDVDSADTAIEVGDDEFWMLM--AGRKLAARDRRVLTAVATQAAGLVKQRE 615 A G PC +D IEV D +L R L A DR VL A QA ++Q+ Sbjct 541 AASTGPRPCTRPGESDVDIEVNPDVHLVLKGPGDRALPAADRTVLEGAAGQALVALRQQR 600 Query 616 LAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLA 675 +A EA +A+ A A ELR +LLSAV HDLRTPLA+ K +VSSLR D+ S EDT ELL Sbjct 601 MAAEAREAQRRADATELRTALLSAVGHDLRTPLASIKASVSSLRAPDLRLSEEDTTELLT 660 Query 676 TIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGID 735 +EES D+LTALV NLLDSSRLA G I P+L +E V RAL + G Sbjct 661 GVEESADRLTALVDNLLDSSRLATGAIVPRLDPVGYDEIVFRALAGL---------DGRQ 711 Query 736 RVKVDVGDAV--AMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRER-------VLI 786 V +D +++ +ADAGLLERV+AN++ NAL+Y R GR+ R V + Sbjct 712 HVDIDTDESLPDVLADAGLLERVVANVVQNALKYG-----RPEGGRIGVRASAHASWVEL 766 Query 787 NVIDEGPGVPRGTEEQLFAPFQR-----PGDHDNTTGVGLGMSVARGFVEAMGGTISATD 841 V+D GPG+P G E +FAPF+R TGVGLG+SVA+GF+EAM G+I A D Sbjct 767 RVVDHGPGLPEGAAETVFAPFERLGDRGGRGDQGETGVGLGLSVAKGFMEAMQGSIRAED 826 Query 842 TPGGGLTVVIDLAA 855 TPGGGLT+V+ L A Sbjct 827 TPGGGLTIVLSLPA 840 >gi|302525128|ref|ZP_07277470.1| sensor histidine kinase [Streptomyces sp. AA4] gi|302434023|gb|EFL05839.1| sensor histidine kinase [Streptomyces sp. AA4] Length=855 Score = 818 bits (2113), Expect = 0.0, Method: Compositional matrix adjust. Identities = 469/842 (56%), Positives = 591/842 (71%), Gaps = 21/842 (2%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 +RG+LRIYLGAAPGVGKT+AMLGEA RRL+RGTDVV +VETHGR KTA LL+G+E++P Sbjct 14 RRGELRIYLGAAPGVGKTFAMLGEARRRLDRGTDVVVGLVETHGRKKTADLLDGLEVVPR 73 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R + +RG F E+D++AVL R P+VV+VDELAHTN PG ++ KRWQD+ E+L+AGI V+S Sbjct 74 RTISHRGHEFAEMDLDAVLARAPEVVVVDELAHTNVPGGRHEKRWQDIDELLEAGIDVLS 133 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHL+ LNDVVE+ITG+ Q+E +PDE+VR A+Q+ELVDITPEALRRRLAHGNVY AE Sbjct 134 TVNVQHLQSLNDVVERITGVTQQETVPDEVVRRAEQLELVDITPEALRRRLAHGNVYPAE 193 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAAL NYFR GNLTALRE+ALLW+ADQVD AL++YRA++KIT TWE RERVVV++TGG Sbjct 194 RIDAALGNYFRPGNLTALRELALLWVADQVDVALQRYRAEQKITDTWETRERVVVSITGG 253 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETL+RRASRIA+++ AEL VVH++RGDGLAG+ + R R LA +GAT H VVGD Sbjct 254 PESETLIRRASRIANRAGAELQVVHILRGDGLAGLGPTAMARCRTLAEEVGATFHAVVGD 313 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAAS-- 382 DVPTALLDFAR +NATQLVVGTSRRSR ARLFD+GIGA VQ+ G IDVHMVTH A Sbjct 314 DVPTALLDFARGVNATQLVVGTSRRSRIARLFDQGIGATVVQQSGPIDVHMVTHSYAGGR 373 Query 383 -RAS-GWSRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVAL 440 RA G S ++P R + W+ ++++P V + V D + + LF + +IVAL Sbjct 374 LRARLGTSPLAP-SRLVMGWVLSILLPVVATGLGVLLRD-AVEFSTDVILFVLSTVIVAL 431 Query 441 LGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASR 500 +GG+ PA ++++ LLN+F T P YT + P VT ++ +AV VA++V AA R Sbjct 432 VGGLGPALVASIFGAGLLNFFFTPPLYTLDVHSPQNVVTLIAMIVVAVMVALVVASAARR 491 Query 501 TREARRASQEAELLALFAGSVLRGAD-LATLLQRVRETYSQRAVTMLRVRQGASTGETVA 559 A RA EA LLA +A +VL + + LL++VRE + +VT+L R G + VA Sbjct 492 GVAAARARTEASLLASYARTVLTNPNPIERLLEKVRENFGLTSVTLLEKRNG--KWDKVA 549 Query 560 CVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEE 619 G PC D D AD I V D + + GR L A DRRVL AVA QA ++Q+ +A Sbjct 550 LSGGEPCADPDEADVDIAVTAD-VHLTLRGRALPAADRRVLEAVAGQALLALRQQRMAAA 608 Query 620 AGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEE 679 A AE A A ELR +LLSAV HDLRTPL + K A+ SLR D++ S EDT EL+ +E Sbjct 609 AAAAERKAEATELRTTLLSAVGHDLRTPLTSIKAAIGSLRAPDLSLSDEDTEELMEAVEL 668 Query 680 SIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKV 739 S D+L L+ NLLDSSRLA G + P LR +E V AL ++ S +V V Sbjct 669 SADRLAGLIDNLLDSSRLATGAVTPHLRPVGYDEVVAHALSTVDN-------SQHVQVSV 721 Query 740 DVGDAVAMADAGLLERVLANLIDNALRY-APDCVVRVNAGRVRERVLINVIDEGPGVPRG 798 D AD GLLERV+AN++DNALR+ D R +A E V + ++D G G+ +G Sbjct 722 DARLPSVQADPGLLERVIANVLDNALRHGGGDVSARASAH--SEFVELRIVDHGKGLRKG 779 Query 799 TEEQLFAPFQR-PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAAPE 857 E FAPFQR GD D+T GVGLG+SVA+GF EAMGGT+ A DTPGGGLTVVI L A Sbjct 780 AAESAFAPFQRLGGDRDSTPGVGLGLSVAKGFTEAMGGTVRAEDTPGGGLTVVISLPACT 839 Query 858 DR 859 R Sbjct 840 GR 841 >gi|291007109|ref|ZP_06565082.1| sensor histidine kinase [Saccharopolyspora erythraea NRRL 2338] Length=1105 Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/858 (55%), Positives = 584/858 (69%), Gaps = 48/858 (5%) Query 23 TTKRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMI 82 + +RG+LRIYLGAAPGVGKTYAMLGEAHRR RGTDVV +VETH R KTA LL+G+E++ Sbjct 5 SARRGELRIYLGAAPGVGKTYAMLGEAHRRAARGTDVVVGLVETHAREKTAALLDGLEVV 64 Query 83 PPRYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITV 142 P R + +RG E+D++AVL R P+V +VDELAHTN PGS+N KRWQD+ E+LDAGI V Sbjct 65 PRRRIAHRGVEVTEMDLDAVLARRPEVAVVDELAHTNAPGSRNEKRWQDIDELLDAGINV 124 Query 143 ISTVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYA 202 +STVN+QHLE LNDVVE ITG+ Q+E +PDE+VR A Q+EL DITPEALRRR+AHGNVY+ Sbjct 125 LSTVNVQHLESLNDVVEAITGVRQQETVPDEVVRRAGQIELADITPEALRRRMAHGNVYS 184 Query 203 AERVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVT 262 A+RVDAAL NYFRTGNLTALRE+ALLWLADQVD AL +YRA++KIT TWEARERVVV++T Sbjct 185 ADRVDAALGNYFRTGNLTALRELALLWLADQVDVALRRYRAERKITDTWEARERVVVSIT 244 Query 263 GGPESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVV 322 GGPESETL+RRA RIA+++ AEL VVHV+RGDGLAG S L R R LA +GA+ HTVV Sbjct 245 GGPESETLIRRARRIAARAGAELQVVHVLRGDGLAGASPGNLARARRLADGVGASFHTVV 304 Query 323 GDDVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAAS 382 GDDVP ALL+FAR +ATQLVVGTSRRSRWARL DEGIGA VQ+ G IDVHMVTHP A Sbjct 305 GDDVPEALLEFARGADATQLVVGTSRRSRWARLLDEGIGAAVVQKSGSIDVHMVTHPEAG 364 Query 383 RASGWSRVS----PRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIV 438 + ++ R + W+ AL +PS + A+ A+ M + + +F+ ++V Sbjct 365 GRRLFKNIARNPLSSARQLWGWVLALALPSAVTAL--AYFSGAMALSADVVGYFLATVVV 422 Query 439 ALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAA 498 AL+GG+APA +ALLSG LLN+FLT P Y+ TIAEP VT +L + + VA+LVD AA Sbjct 423 ALVGGMAPAITAALLSGGLLNFFLTPPLYSLTIAEPQNVVTLLAMLFVGLLVAILVDRAA 482 Query 499 SRTREARRASQEAELLALFAGSVLRGAD-LATLLQRVRETYSQRAVTMLRVRQGASTGET 557 A A EA LLA +A +VL D L LL++V E + + +L ++G Sbjct 483 RLAERAAHARTEAALLASYARTVLTHPDPLPRLLEKVVENFGLTSAALLERQEG--DWHV 540 Query 558 VACVGTNPCRDVDSADTAIEVGDDEFWMLM--AGRKLAARDRRVLTAVATQAAGLVKQRE 615 A G PC +D IEV D +L R L A DR VL A QA ++Q+ Sbjct 541 AASTGPRPCTRPGESDVDIEVNPDVHLVLKGPGDRALPAADRTVLEGAAGQALVALRQQR 600 Query 616 LAEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLA 675 +A EA +A+ A A ELR +LLSAV HDLRTPLA+ K +VSSLR D+ S EDT ELL Sbjct 601 MAAEAREAQRRADATELRTALLSAVGHDLRTPLASIKASVSSLRAPDLRLSEEDTTELLT 660 Query 676 TIEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGID 735 +EES D+LTALV NLLDSSRLA G I P+L +E V RAL + G Sbjct 661 GVEESADRLTALVDNLLDSSRLATGAIVPRLDPVGYDEIVFRALAGL---------DGRQ 711 Query 736 RVKVDVGDAV--AMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRER-------VLI 786 V +D +++ +ADAGLLERV+AN++ NAL+Y R GR+ R V + Sbjct 712 HVDIDTDESLPDVLADAGLLERVVANVVQNALKYG-----RPEGGRIGVRASAHASWVEL 766 Query 787 NVIDEGPGVPRGTEEQLFAPFQR-----PGDHDNTTGVGLGMSVARGFVEAMGGTISATD 841 V+D GPG+P G E +FAPF+R TGVGLG+SVA+GF+EAM G+I A D Sbjct 767 RVVDHGPGLPEGAAETVFAPFERLGDRGGRGDQGETGVGLGLSVAKGFMEAMQGSIRAED 826 Query 842 TPGGGLTVVIDLAAPEDR 859 TPGGG P+DR Sbjct 827 TPGGG---------PDDR 835 >gi|326384128|ref|ZP_08205811.1| Osmosensitive K channel His kinase sensor [Gordonia neofelifaecis NRRL B-59395] gi|326197288|gb|EGD54479.1| Osmosensitive K channel His kinase sensor [Gordonia neofelifaecis NRRL B-59395] Length=842 Score = 803 bits (2073), Expect = 0.0, Method: Compositional matrix adjust. Identities = 474/837 (57%), Positives = 602/837 (72%), Gaps = 21/837 (2%) Query 31 IYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPRYVEYR 90 ++LG APGVGKTY ML +A + G DVV VVE+HGR TA L++G+E+I VEYR Sbjct 1 MFLGCAPGVGKTYEMLAQARTLADEGVDVVVGVVESHGRAATAALVDGLEVIERVPVEYR 60 Query 91 GARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVISTVNIQH 150 G E+D++AVL R P++VLVDELAH+N PG +N KRWQD++ + DAGI V+STVNIQH Sbjct 61 GTVLLEMDLDAVLARDPELVLVDELAHSNAPGMQNEKRWQDIEVLRDAGIDVLSTVNIQH 120 Query 151 LEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAERVDAAL 210 E LNDVV QITG+ Q+E +PD +VR ADQ+ELVDI P ALR+RLA G VY A R+D AL Sbjct 121 FESLNDVVAQITGVTQRETVPDAVVRGADQIELVDIEPRALRQRLAQGKVYDAGRIDGAL 180 Query 211 SNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGPESETL 270 +N+FR GNLTALRE+ALLWLAD+VD L YRA IT TWEARERVVV+VTGGPES L Sbjct 181 ANFFRQGNLTALRELALLWLADRVDDKLAAYRAANAITDTWEARERVVVSVTGGPESAGL 240 Query 271 VRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGDDVPTAL 330 +RRA RIAS+SSAEL+VVHV+RGDGL A +G +R+LA+S+GA ++VVGDDVP L Sbjct 241 IRRAGRIASRSSAELLVVHVVRGDGLTDRGAVDVGGLRKLASSIGAGFYSVVGDDVPQTL 300 Query 331 LDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRASGWSRV 390 L+FAR MNATQLV+GTSRRSRW RLFDEG+GA V++ G IDVHMVTH A+ + Sbjct 301 LEFARAMNATQLVLGTSRRSRWQRLFDEGVGAAVVRDSGRIDVHMVTHDKAAVRNRLDIR 360 Query 391 SPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIVALLGGVAPAALS 450 R SW+ A++ P + + + +DR++G +SALFF+ +L VALLGGV PAALS Sbjct 361 DTRFHRPGSWILAVLAPVALTGL-LTVIDRYLGFASQSALFFVVILAVALLGGVVPAALS 419 Query 451 ALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAASRTREARRASQE 510 A++SG+LLNYF PR+T+TIAEPD +T V+L +A+AVA LVD A R R+A+RA ++ Sbjct 420 AVMSGLLLNYFFAAPRFTFTIAEPDNIITIVVMLIIAIAVAALVDSATVRRRQAQRAGRD 479 Query 511 AELLALFAGSVLRGADLATLLQRVRETYSQRAVTMLRVRQGASTGETVA-CVGTNPCRDV 569 AELLALF+ +VL GA ++ LLQRVRETY Q +V + R R+ + ET+A VG +P R Sbjct 480 AELLALFSSAVLDGAGVSGLLQRVRETYQQTSVAVAR-REDRT--ETIAHSVGDDPPRTA 536 Query 570 DSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELAEEAGQAEAIARA 629 ADT E+ +L+ G ++ A D+RVL AVA+Q A V++ L EA +A+ +AR Sbjct 537 AEADTVCPAAGGEYELLLRGPEVGAADQRVLAAVASQVAAAVERDRLEAEAAEADELART 596 Query 630 DELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATIEESIDQLTALVA 689 DELRR+LL+AVSHDLRTPLAAAK A SSLR+ +V FS EDTAELLAT+EESIDQL +LV Sbjct 597 DELRRALLAAVSHDLRTPLAAAKAAASSLRSPEVTFSEEDTAELLATVEESIDQLASLVG 656 Query 690 NLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRVKVDVGDAVAMAD 749 NLLDSSRLAAGV+RPQ R YL E + RA ++ + A G + V++ A+ D Sbjct 657 NLLDSSRLAAGVVRPQRERTYLPEVIHRAGAAVTRRAPGN-----PEISVEIACDWALTD 711 Query 750 AGLLERVLANLIDNALRYAPDCV-VRVN----AGRVRE-----RVLINVIDEGPGVPRGT 799 AGLLER LANLIDNALR+ V VR + +GR + R I VID G G+P Sbjct 712 AGLLERALANLIDNALRHGGGNVEVRTDLVQASGRGADDSDAPRCRIRVIDHGAGIPVAE 771 Query 800 EEQLFAPFQRPGDHD-NTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAA 855 ++F PF + GD + T+GVGLG+SVA GFV A+GGT+ A TPGGG T+V++L A Sbjct 772 RSRVFTPFHQYGDQNRQTSGVGLGLSVASGFVSAIGGTLVAAQTPGGGTTMVVELPA 828 >gi|337768621|emb|CCB77334.1| Sensor protein kdpD [Streptomyces cattleya NRRL 8057] Length=847 Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust. Identities = 437/841 (52%), Positives = 577/841 (69%), Gaps = 24/841 (2%) Query 26 RGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPPR 85 RG+LRIYLGAAPGVGKTYAML E HRRLERGTD+V VETH R +T +L G+E IP R Sbjct 3 RGRLRIYLGAAPGVGKTYAMLSEGHRRLERGTDLVVGFVETHNRPRTEVMLHGLEQIPRR 62 Query 86 YVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIST 145 + YRG+RF E+DV+AVL R P+V LVDEL HTN PGS+N KRWQDV+E+L+AG+ VIST Sbjct 63 TLTYRGSRFTEMDVDAVLARRPEVALVDELPHTNVPGSRNAKRWQDVEELLEAGVDVIST 122 Query 146 VNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAER 205 VNIQHLE L DVVE ITG+ Q+E +PDE+VR ADQ+ELVD++P+ALRRR+AHGN+Y ++ Sbjct 123 VNIQHLESLGDVVESITGVRQRETVPDEVVRRADQIELVDMSPQALRRRMAHGNIYQPDK 182 Query 206 VDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGGP 265 +DAAL+NYFR GNLTALRE+ALLW AD+VD L++YRA+ +I++TW+ARER+VV +TGGP Sbjct 183 IDAALANYFRPGNLTALRELALLWTADRVDEYLQQYRAEHRISSTWQARERIVVGLTGGP 242 Query 266 ESETLVRRASRIASK-SSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 E TL+RRA+R+A+K S +E++ V+V R DGLA S +L R L LG + H VVGD Sbjct 243 EGRTLIRRAARLAAKGSGSEILAVYVARSDGLASGSPKELTVQRTLVEDLGGSFHHVVGD 302 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPG-GIDVHMVTHPAASR 383 DVPTALLDFAR +NATQ+V+GTSRR W + G+GA +E G +DVH+VTH A++ Sbjct 303 DVPTALLDFARGVNATQIVLGTSRRKAWQYVLGPGVGATVARESGPDLDVHIVTHEEAAK 362 Query 384 ASGW-----SRVSPRERHIASWLAALVVPSVICAITVAWLDRFMGIGGESALFFIGVLIV 438 G +R+ R R WL + + +G+ + L+ + Sbjct 363 GRGLPVARGARLG-RARIALGWLVG-CGGPALLTPLLLAFTPGLGLANDMLLYLATTVAA 420 Query 439 ALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGAA 498 AL+GG+ PA SA + +L+NYF P + +TIA+P V + +A+AV+VA +VD AA Sbjct 421 ALVGGMLPALASAAVGSLLINYFFAPPVHRFTIADPHNIVAIVIFVAVAVSVASVVDLAA 480 Query 499 SRTREARRASQEAELLALFAGSVLRG-ADLATLLQRVRETYSQRAVTMLRVRQGASTGET 557 RT +A R EAE+L+L AG+VLRG L LL+RVRET++ +V +L + Sbjct 481 RRTHQAARLRAEAEILSLLAGNVLRGETSLDALLERVRETFAMDSVALLERNDEYAPWTR 540 Query 558 VACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQRELA 617 VG PC D+AD A+ VG D + ++GR L A DRR+L+A A QAA L+ +R L Sbjct 541 AGGVGPTPCGRPDAADVAVPVG-DRMSLALSGRVLPAEDRRLLSAFAAQAAVLLDRRRLV 599 Query 618 EEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLATI 677 EA QA +A + +R +LL+AVSHDLRTPLAA K AVSSLR++DVA+SPED A+LL I Sbjct 600 GEAEQARELAEGNRIRTALLAAVSHDLRTPLAAIKAAVSSLRSDDVAWSPEDEADLLEAI 659 Query 678 EESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDRV 737 EE D+L LV NLLD SRL G + P ++ L+E V AL + D V Sbjct 660 EEGADKLDHLVGNLLDMSRLQTGTVTPLMQEVDLDEVVPMALGGVPP----------DSV 709 Query 738 KVDVGDAVAM--ADAGLLERVLANLIDNALRYAPDCV-VRVNAGRVRERVLINVIDEGPG 794 +D+ + + M AD GLLER++AN+++NA++Y+ D V V A +R+RV + + D GPG Sbjct 710 ALDIPETLPMVLADPGLLERLVANVVENAVKYSGDAERVLVAASALRDRVELRIADRGPG 769 Query 795 VPRGTEEQLFAPFQRPGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLA 854 VP +E++F PFQR GD GVGLG++VARGF EAMGGT+ A DTPGGGLT+V+ L Sbjct 770 VPDTAKERIFEPFQRYGDAPRGAGVGLGLAVARGFAEAMGGTLVADDTPGGGLTMVLTLR 829 Query 855 A 855 A Sbjct 830 A 830 >gi|300783816|ref|YP_003764107.1| two-component system sensor kinase [Amycolatopsis mediterranei U32] gi|299793330|gb|ADJ43705.1| two-component system sensor kinase [Amycolatopsis mediterranei U32] gi|340525209|gb|AEK40414.1| two-component system sensor kinase [Amycolatopsis mediterranei S699] Length=845 Score = 786 bits (2031), Expect = 0.0, Method: Compositional matrix adjust. Identities = 468/840 (56%), Positives = 587/840 (70%), Gaps = 25/840 (2%) Query 25 KRGQLRIYLGAAPGVGKTYAMLGEAHRRLERGTDVVAAVVETHGRNKTAKLLEGIEMIPP 84 +RG+LRIYLGAAPGVGKT+AMLGEA RRL+RGTDVV +VETHGR KTA LLEG+E++P Sbjct 11 RRGELRIYLGAAPGVGKTFAMLGEARRRLDRGTDVVVGLVETHGREKTAVLLEGLEIVPR 70 Query 85 RYVEYRGARFPELDVEAVLRRHPQVVLVDELAHTNTPGSKNPKRWQDVQEILDAGITVIS 144 R+ E+RG F E+DV+A+L R P+V ++DELAHTN PGS+N KRWQDV+E+L AGI V+S Sbjct 71 RHAEHRGRAFDEMDVDAILARAPEVAVIDELAHTNVPGSRNAKRWQDVEELLTAGIDVLS 130 Query 145 TVNIQHLEGLNDVVEQITGIEQKEKIPDEIVRAADQVELVDITPEALRRRLAHGNVYAAE 204 TVN+QHL+ LNDVVE+ITG+ Q+E +PDE+VR A+Q+ELVDITPEALRRRLAHGNVY AE Sbjct 131 TVNVQHLQSLNDVVERITGVTQQETVPDEVVRRAEQLELVDITPEALRRRLAHGNVYPAE 190 Query 205 RVDAALSNYFRTGNLTALREIALLWLADQVDAALEKYRADKKITATWEARERVVVAVTGG 264 R+DAAL NYFR GNLTALRE+ALLW+ADQVD AL++YRA+++IT TWEARERVV ++TGG Sbjct 191 RIDAALGNYFRPGNLTALRELALLWVADQVDVALQRYRAEQRITDTWEARERVVASITGG 250 Query 265 PESETLVRRASRIASKSSAELMVVHVIRGDGLAGVSAPQLGRVRELATSLGATMHTVVGD 324 PESETL+RRASRIA+++ AEL VVH++RGDGLAG+S + R R+LA +GAT HTVVGD Sbjct 251 PESETLIRRASRIATRAGAELQVVHILRGDGLAGISPAAMARCRKLAEEVGATFHTVVGD 310 Query 325 DVPTALLDFAREMNATQLVVGTSRRSRWARLFDEGIGARTVQEPGGIDVHMVTHPAASRA 384 DVP ALLDFAR +NATQLV+GTSRRSR ARLFDEGIGA V+ G IDVHMVTH S A Sbjct 311 DVPGALLDFARGVNATQLVLGTSRRSRVARLFDEGIGAAVVRRSGPIDVHMVTH---SEA 367 Query 385 SGWSRVSPRERHIASWLAALVVPS---VICAITVAWLDRFMGIGGESALFFIGV----LI 437 G R + L+ LV S V+ + V + F+ G + A I ++ Sbjct 368 GGRLRTGLTASPLG--LSRLVTGSVLGVVLPVLVTLVGVFVPTGLDFATDVIAYVLVTVV 425 Query 438 VALLGGVAPAALSALLSGMLLNYFLTEPRYTWTIAEPDAAVTEFVLLAMAVAVAVLVDGA 497 VAL+GG+ PA ++A+L LLN+F T P YT + P VT ++ +AV VA++VD A Sbjct 426 VALVGGLGPALVAAVLGAGLLNFFFTPPLYTLNVHTPQNLVTLIAMVVVAVLVALVVDQA 485 Query 498 ASRTREARRASQEAELLALFAGSVLRGAD-LATLLQRVRETYSQRAVTMLRVRQGASTGE 556 A R +A RA EA LLA +A +VL A+ + LL +VRE ++ +VT+L + G + Sbjct 486 ARRAAQAARARTEAALLASYARTVLTHANPIERLLAKVRENFALTSVTLLEKQDG--VWQ 543 Query 557 TVACVGTNPCRDVDSADTAIEVGDDEFWMLMAGRKLAARDRRVLTAVATQAAGLVKQREL 616 VA G +PC D D AD I V D + + GR L A DRRVL AVA QA ++Q+ Sbjct 544 CVATAGEHPCADPDEADADIAVTAD-VHLTLRGRALPAADRRVLEAVAGQALLALRQQRT 602 Query 617 AEEAGQAEAIARADELRRSLLSAVSHDLRTPLAAAKVAVSSLRTEDVAFSPEDTAELLAT 676 A A +AE A A ELR +LLSAV HDLRTPL + K ++ SLR D+ S EDTAEL+ Sbjct 603 AAAAARAERKAEATELRTTLLSAVGHDLRTPLTSIKASIGSLRAADLELSEEDTAELMEA 662 Query 677 IEESIDQLTALVANLLDSSRLAAGVIRPQLRRAYLEEAVQRALVSIGKGATGFYRSGIDR 736 IE S D+L L+ NLLDSSRLA G +RP LR +E V AL ++ Sbjct 663 IELSADRLAGLIDNLLDSSRLATGAVRPHLRPVGYDEVVAHALSTVDGSDDVVVAVDDQL 722 Query 737 VKVDVGDAVAMADAGLLERVLANLIDNALRYAPDCVVRVNAGRVRERVLINVIDEGPGVP 796 V +AD GLLERV+AN++DNALR+ V A +V + ++D G G+ Sbjct 723 PSV-------LADPGLLERVVANVLDNALRHG-GAPVSARASAHSGQVELRIVDHGKGLR 774 Query 797 RGTEEQLFAPFQR-PGDHDNTTGVGLGMSVARGFVEAMGGTISATDTPGGGLTVVIDLAA 855 +G + FAPFQR GD D T GVGLG+SVA+GF EAMGGTI A DTPGGGLTVV+ L A Sbjct 775 KGAADSAFAPFQRLGGDRDTTPGVGLGLSVAKGFTEAMGGTIRAEDTPGGGLTVVVSLPA 834 Lambda K H 0.319 0.134 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 2097919975266 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40