BLAST Search Results


BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1034c

Length=129
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|253799934|ref|YP_003032935.1|  transposase [Mycobacterium tube...   262    1e-68
gi|148822243|ref|YP_001286997.1|  transposase [Mycobacterium tube...   262    1e-68
gi|15608174|ref|NP_215550.1|  transposase [Mycobacterium tubercul...   261    3e-68
gi|344218861|gb|AEM99491.1|  transposase [Mycobacterium tuberculo...   259    1e-67
gi|258652805|ref|YP_003201961.1|  transposase IS4 family protein ...   201    4e-50
gi|111025277|ref|YP_707697.1|  transposase [Rhodococcus jostii RH...   197    6e-49
gi|111025371|ref|YP_707791.1|  transposase [Rhodococcus jostii RH...   196    7e-49
gi|111026324|ref|YP_708607.1|  transposase [Rhodococcus jostii RH...   192    1e-47
gi|308406141|ref|ZP_07495279.2|  transposase [Mycobacterium tuber...   177    3e-43
gi|167966936|ref|ZP_02549213.1|  transposase [Mycobacterium tuber...   177    4e-43
gi|289449083|ref|ZP_06438827.1|  transposase [Mycobacterium tuber...   177    6e-43
gi|15610523|ref|NP_217904.1|  transposase [Mycobacterium tubercul...   176    7e-43
gi|308377331|ref|ZP_07668489.1|  transposase [Mycobacterium tuber...   176    8e-43
gi|308232447|ref|ZP_07664088.1|  transposase [Mycobacterium tuber...   176    1e-42
gi|289751636|ref|ZP_06511014.1|  transposase [Mycobacterium tuber...   171    5e-41
gi|15610098|ref|NP_217477.1|  transposase [Mycobacterium tubercul...   170    7e-41
gi|298526868|ref|ZP_07014277.1|  transposase [Mycobacterium tuber...   157    5e-37
gi|289747214|ref|ZP_06506592.1|  transposase [Mycobacterium tuber...   139    1e-31
gi|289759546|ref|ZP_06518924.1|  hypothetical protein TBEG_03027 ...   117    5e-25
gi|253577715|ref|ZP_04855012.1|  transposase [Paenibacillus sp. o...  96.7    1e-18
gi|169830876|ref|YP_001716858.1|  putative methyl-accepting chemo...  95.9    2e-18
gi|83590978|ref|YP_430987.1|  transposase IS4 [Moorella thermoace...  95.5    2e-18
gi|308205889|gb|ADO19301.1|  hypothetical protein Nfla_9401 [Nost...  93.2    1e-17
gi|147677689|ref|YP_001211904.1|  hypothetical protein PTH_1354 [...  92.0    2e-17
gi|298251049|ref|ZP_06974853.1|  transposase IS4 family protein [...  84.3    5e-15
gi|298248375|ref|ZP_06972180.1|  transposase IS4 family protein [...  84.0    6e-15
gi|298248369|ref|ZP_06972174.1|  transposase IS4 family protein [...  84.0    7e-15
gi|298241044|ref|ZP_06964851.1|  transposase IS4 family protein [...  84.0    7e-15
gi|298248371|ref|ZP_06972176.1|  transposase IS4 family protein [...  77.8    5e-13
gi|120553324|ref|YP_957675.1|  transposase, IS4 family protein [M...  58.5    3e-07
gi|298527643|ref|ZP_07015047.1|  transposase IS4 family protein [...  56.2    2e-06
gi|16263346|ref|NP_436139.1|  TRm17b transposase fragment [Sinorh...  55.8    2e-06
gi|15966575|ref|NP_386928.1|  putative partial transposase for IS...  55.8    2e-06
gi|15966358|ref|NP_386711.1|  transposase ISRM17 [Sinorhizobium m...  55.5    3e-06
gi|334317360|ref|YP_004549979.1|  transposase IS4 family protein ...  55.5    3e-06
gi|124514705|gb|EAY56217.1|  probable transposase [Leptospirillum...  55.5    3e-06
gi|124514919|gb|EAY56430.1|  probable transposase [Leptospirillum...  55.1    3e-06
gi|334320405|ref|YP_004557034.1|  transposase IS4 family protein ...  55.1    3e-06
gi|206603356|gb|EDZ39836.1|  Transposase [Leptospirillum sp. Grou...  54.7    4e-06
gi|124516354|gb|EAY57862.1|  transposase [Leptospirillum rubarum]     54.7    4e-06
gi|124515501|gb|EAY57011.1|  probable transposase [Leptospirillum...  54.7    4e-06
gi|116253888|ref|YP_769726.1|  transposon-related protein [Rhizob...  54.7    4e-06
gi|124515920|gb|EAY57429.1|  putative transposase [Leptospirillum...  54.7    4e-06
gi|124516081|gb|EAY57590.1|  putative transposase [Leptospirillum...  54.7    5e-06
gi|124514575|gb|EAY56087.1|  probable transposase [Leptospirillum...  54.3    6e-06
gi|85858589|ref|YP_460791.1|  transposase [Syntrophus aciditrophi...  53.9    8e-06
gi|13475196|ref|NP_106760.1|  transposase [Mesorhizobium loti MAF...  53.5    1e-05
gi|206602031|gb|EDZ38513.1|  transposase [Leptospirillum sp. Grou...  52.8    2e-05
gi|334319413|ref|YP_004551972.1|  transposase IS4 family protein ...  52.8    2e-05
gi|124514331|gb|EAY55845.1|  putative transposase [Leptospirillum...  52.0    3e-05


>gi|253799934|ref|YP_003032935.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|298524532|ref|ZP_07011941.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308231706|ref|ZP_07413508.2| transposase [Mycobacterium tuberculosis SUMu001]
 17 more sequence titles
 gi|308370088|ref|ZP_07666862.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308370585|ref|ZP_07666971.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308371837|ref|ZP_07426409.2| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308376590|ref|ZP_07668304.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308379943|ref|ZP_07488177.2| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308398098|ref|ZP_07669377.1| transposase [Mycobacterium tuberculosis SUMu012]
 gi|253321437|gb|ACT26040.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|298494326|gb|EFI29620.1| conserved hypothetical protein [Mycobacterium tuberculosis 94_M4241A]
 gi|308216319|gb|EFO75718.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308325369|gb|EFP14220.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308331513|gb|EFP20364.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308335319|gb|EFP24170.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308350623|gb|EFP39474.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308363112|gb|EFP51963.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308366777|gb|EFP55628.1| transposase [Mycobacterium tuberculosis SUMu012]
 gi|323720535|gb|EGB29617.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|328459678|gb|AEB05101.1| transposase [Mycobacterium tuberculosis KZN 4207]
Length=164

 Score =  262 bits (670),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK
Sbjct  36   VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  95

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN
Sbjct  96   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  155

Query  121  LVTISALPA  129
            LVTISALPA
Sbjct  156  LVTISALPA  164


>gi|148822243|ref|YP_001286997.1| transposase [Mycobacterium tuberculosis F11]
 gi|167968535|ref|ZP_02550812.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|254231326|ref|ZP_04924653.1| hypothetical protein TBCG_01022 [Mycobacterium tuberculosis C]
 20 more sequence titles
 gi|254363949|ref|ZP_04979995.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|289555183|ref|ZP_06444393.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289744772|ref|ZP_06504150.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|308373006|ref|ZP_07667491.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308374176|ref|ZP_07667727.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308375330|ref|ZP_07443556.2| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308377590|ref|ZP_07479749.2| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308378800|ref|ZP_07483939.2| transposase [Mycobacterium tuberculosis SUMu010]
 gi|124600385|gb|EAY59395.1| hypothetical protein TBCG_01022 [Mycobacterium tuberculosis C]
 gi|134149463|gb|EBA41508.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148720770|gb|ABR05395.1| transposase [Mycobacterium tuberculosis F11]
 gi|289439815|gb|EFD22308.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289685300|gb|EFD52788.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|308339127|gb|EFP27978.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308342798|gb|EFP31649.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308346708|gb|EFP35559.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308355256|gb|EFP44107.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308359210|gb|EFP48061.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|339294036|gb|AEJ46147.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339297676|gb|AEJ49786.1| transposase [Mycobacterium tuberculosis CCDC5180]
Length=163

 Score =  262 bits (669),  Expect = 1e-68, Method: Compositional matrix adjust.
 Identities = 129/129 (100%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK
Sbjct  35   VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  94

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN
Sbjct  95   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  154

Query  121  LVTISALPA  129
            LVTISALPA
Sbjct  155  LVTISALPA  163


>gi|15608174|ref|NP_215550.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15840464|ref|NP_335501.1| IS1560 transposase [Mycobacterium tuberculosis CDC1551]
 gi|31792226|ref|NP_854719.1| transposase [Mycobacterium bovis AF2122/97]
 31 more sequence titles
 gi|121636964|ref|YP_977187.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148660817|ref|YP_001282340.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|224989436|ref|YP_002644123.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289442457|ref|ZP_06432201.1| transposase [Mycobacterium tuberculosis T46]
 gi|289446615|ref|ZP_06436359.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289569015|ref|ZP_06449242.1| transposase [Mycobacterium tuberculosis T17]
 gi|289573674|ref|ZP_06453901.1| transposase [Mycobacterium tuberculosis K85]
 gi|289749567|ref|ZP_06508945.1| transposase [Mycobacterium tuberculosis T92]
 gi|289753096|ref|ZP_06512474.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289757119|ref|ZP_06516497.1| transposase [Mycobacterium tuberculosis T85]
 gi|294995223|ref|ZP_06800914.1| transposase [Mycobacterium tuberculosis 210]
 gi|297633563|ref|ZP_06951343.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297730548|ref|ZP_06959666.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|313657877|ref|ZP_07814757.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|339631096|ref|YP_004722738.1| transposase [Mycobacterium africanum GM041182]
 gi|1869994|emb|CAB06845.1| PROBABLE TRANSPOSASE (FRAGMENT) [Mycobacterium tuberculosis H37Rv]
 gi|13880637|gb|AAK45315.1| IS1560' protein [Mycobacterium tuberculosis CDC1551]
 gi|31617814|emb|CAD93923.1| PROBABLE TRANSPOSASE (FRAGMENT) [Mycobacterium bovis AF2122/97]
 gi|121492611|emb|CAL71079.1| Probable transposase (fragment) [Mycobacterium bovis BCG str. 
Pasteur 1173P2]
 gi|148504969|gb|ABQ72778.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|224772549|dbj|BAH25355.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289415376|gb|EFD12616.1| transposase [Mycobacterium tuberculosis T46]
 gi|289419573|gb|EFD16774.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289538105|gb|EFD42683.1| transposase [Mycobacterium tuberculosis K85]
 gi|289542769|gb|EFD46417.1| transposase [Mycobacterium tuberculosis T17]
 gi|289690154|gb|EFD57583.1| transposase [Mycobacterium tuberculosis T92]
 gi|289693683|gb|EFD61112.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289712683|gb|EFD76695.1| transposase [Mycobacterium tuberculosis T85]
 gi|326904737|gb|EGE51670.1| transposase [Mycobacterium tuberculosis W-148]
 gi|339330452|emb|CCC26117.1| putative transposase (fragment) [Mycobacterium africanum GM041182]
 gi|341600980|emb|CCC63651.1| probable transposase (fragment) [Mycobacterium bovis BCG str. 
Moreau RDJ]
Length=129

 Score =  261 bits (666),  Expect = 3e-68, Method: Compositional matrix adjust.
 Identities = 128/129 (99%), Positives = 129/129 (100%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            +QQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK
Sbjct  1    MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN
Sbjct  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120

Query  121  LVTISALPA  129
            LVTISALPA
Sbjct  121  LVTISALPA  129


>gi|344218861|gb|AEM99491.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=129

 Score =  259 bits (661),  Expect = 1e-67, Method: Compositional matrix adjust.
 Identities = 127/129 (99%), Positives = 128/129 (99%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            +QQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEV VKNVLIPRKGK
Sbjct  1    MQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVAVKNVLIPRKGK  60

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN
Sbjct  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120

Query  121  LVTISALPA  129
            LVTISALPA
Sbjct  121  LVTISALPA  129


>gi|258652805|ref|YP_003201961.1| transposase IS4 family protein [Nakamurella multipartita DSM 
44233]
 gi|258556030|gb|ACV78972.1| transposase IS4 family protein [Nakamurella multipartita DSM 
44233]
Length=346

 Score =  201 bits (510),  Expect = 4e-50, Method: Compositional matrix adjust.
 Identities = 94/129 (73%), Positives = 106/129 (83%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNPPDAPQLAPA+  +  R GRTPRTVTADRGYGEA+VDQQLT+ GV+NV+IPRKG+
Sbjct  218  VELGNPPDAPQLAPAIDRITARTGRTPRTVTADRGYGEASVDQQLTDRGVRNVVIPRKGR  277

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            P   RRA EHR AFRRT+KWRTGCEGRIS LKRGYGWDR R+  LEG RTW G G+  HN
Sbjct  278  PGAARRAVEHRPAFRRTVKWRTGCEGRISTLKRGYGWDRTRLDSLEGARTWTGQGILTHN  337

Query  121  LVTISALPA  129
            LV I+AL A
Sbjct  338  LVKIAALTA  346


>gi|111025277|ref|YP_707697.1| transposase [Rhodococcus jostii RHA1]
 gi|110824256|gb|ABG99539.1| probable transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  197 bits (500),  Expect = 6e-49, Method: Compositional matrix adjust.
 Identities = 96/129 (75%), Positives = 106/129 (83%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V++GNP DAPQLAPAV  V+ RAGR PRTVTADRGYGE AV+  L ++GV++V+IPRKGK
Sbjct  351  VERGNPADAPQLAPAVDRVRTRAGRPPRTVTADRGYGEKAVEDDLRDLGVRHVVIPRKGK  410

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS DRRAEEHR AFRRTIKWRTG EGRIS LKRGYGWDR RI   EG + WVGHGV AHN
Sbjct  411  PSADRRAEEHRPAFRRTIKWRTGVEGRISALKRGYGWDRTRIDSTEGAKIWVGHGVLAHN  470

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  471  LVKISTLAA  479


>gi|111025371|ref|YP_707791.1| transposase [Rhodococcus jostii RHA1]
 gi|110824350|gb|ABG99633.1| transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  196 bits (499),  Expect = 7e-49, Method: Compositional matrix adjust.
 Identities = 96/129 (75%), Positives = 106/129 (83%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V++GNP DAPQLAPAV  V+ RAGR PRTVTADRGYGE AV+  L ++GV++V+IPRKGK
Sbjct  351  VERGNPADAPQLAPAVDRVRTRAGRPPRTVTADRGYGEKAVEDDLRDLGVRHVVIPRKGK  410

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS DRRAEEHR AFRRTIKWRTG EGRIS LKRGYGWDR RI   EG + WVGHGV AHN
Sbjct  411  PSADRRAEEHRPAFRRTIKWRTGVEGRISALKRGYGWDRTRIDSTEGAQIWVGHGVLAHN  470

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  471  LVKISTLAA  479


>gi|111026324|ref|YP_708607.1| transposase [Rhodococcus jostii RHA1]
 gi|110825167|gb|ABH00449.1| possible transposase [Rhodococcus jostii RHA1]
Length=173

 Score =  192 bits (489),  Expect = 1e-47, Method: Compositional matrix adjust.
 Identities = 96/129 (75%), Positives = 106/129 (83%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V++GNP DAPQLAPAV  V+ RAGR PRTVTADRGYGE AV+  L ++GV++V+IPRKGK
Sbjct  45   VERGNPADAPQLAPAVDRVRTRAGRPPRTVTADRGYGEKAVEDDLRDLGVRHVVIPRKGK  104

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS DRRAEEHR AFRRTIKWRTG EGRIS LKRGYGWDR RI   EG + WVGHGV AHN
Sbjct  105  PSADRRAEEHRPAFRRTIKWRTGVEGRISALKRGYGWDRTRIDSTEGAKIWVGHGVLAHN  164

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  165  LVKISTLAA  173


>gi|308406141|ref|ZP_07495279.2| transposase [Mycobacterium tuberculosis SUMu012]
 gi|308364375|gb|EFP53226.1| transposase [Mycobacterium tuberculosis SUMu012]
Length=272

 Score =  177 bits (450),  Expect = 3e-43, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  144  VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  203

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  204  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  263

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  264  LVKISTLAA  272


>gi|167966936|ref|ZP_02549213.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|253800433|ref|YP_003033434.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254552492|ref|ZP_05142939.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 6 more sequence titles
 gi|294995842|ref|ZP_06801533.1| transposase [Mycobacterium tuberculosis 210]
 gi|297636047|ref|ZP_06953827.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297733046|ref|ZP_06962164.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|313660378|ref|ZP_07817258.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|253321936|gb|ACT26539.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|323717969|gb|EGB27157.1| transposase [Mycobacterium tuberculosis CDC1551A]
Length=246

 Score =  177 bits (449),  Expect = 4e-43, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  118  VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  177

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  178  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  237

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  238  LVKISTLAA  246


>gi|289449083|ref|ZP_06438827.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289422041|gb|EFD19242.1| transposase [Mycobacterium tuberculosis CPHL_A]
Length=225

 Score =  177 bits (448),  Expect = 6e-43, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  97   VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  156

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  157  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  216

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  217  LVKISTLAA  225


>gi|15610523|ref|NP_217904.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15842980|ref|NP_338017.1| IS1560 transposase [Mycobacterium tuberculosis CDC1551]
 gi|31794567|ref|NP_857060.1| transposase [Mycobacterium bovis AF2122/97]
 41 more sequence titles
 gi|121639311|ref|YP_979535.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148663250|ref|YP_001284773.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148824594|ref|YP_001289348.1| transposase [Mycobacterium tuberculosis F11]
 gi|224991808|ref|YP_002646497.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|254233988|ref|ZP_04927313.1| hypothetical protein TBCG_03329 [Mycobacterium tuberculosis C]
 gi|254366000|ref|ZP_04982045.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|289444957|ref|ZP_06434701.1| transposase [Mycobacterium tuberculosis T46]
 gi|289555663|ref|ZP_06444873.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289571622|ref|ZP_06451849.1| transposase [Mycobacterium tuberculosis T17]
 gi|289576118|ref|ZP_06456345.1| transposase [Mycobacterium tuberculosis K85]
 gi|289747209|ref|ZP_06506587.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289752101|ref|ZP_06511479.1| transposase [Mycobacterium tuberculosis T92]
 gi|289755516|ref|ZP_06514894.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289763568|ref|ZP_06522946.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|298526866|ref|ZP_07014275.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|339633392|ref|YP_004725034.1| transposase [Mycobacterium africanum GM041182]
 gi|2661666|emb|CAA15772.1| POSSIBLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
 gi|13883319|gb|AAK47831.1| IS1560, transposase [Mycobacterium tuberculosis CDC1551]
 gi|31620164|emb|CAD95607.1| POSSIBLE TRANSPOSASE [Mycobacterium bovis AF2122/97]
 gi|121494959|emb|CAL73445.1| Possible transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124599517|gb|EAY58621.1| hypothetical protein TBCG_03329 [Mycobacterium tuberculosis C]
 gi|134151513|gb|EBA43558.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148507402|gb|ABQ75211.1| putative transposase [Mycobacterium tuberculosis H37Ra]
 gi|148723121|gb|ABR07746.1| transposase [Mycobacterium tuberculosis F11]
 gi|224774923|dbj|BAH27729.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|289417876|gb|EFD15116.1| transposase [Mycobacterium tuberculosis T46]
 gi|289440295|gb|EFD22788.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289540549|gb|EFD45127.1| transposase [Mycobacterium tuberculosis K85]
 gi|289545376|gb|EFD49024.1| transposase [Mycobacterium tuberculosis T17]
 gi|289687737|gb|EFD55225.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289692688|gb|EFD60117.1| transposase [Mycobacterium tuberculosis T92]
 gi|289696103|gb|EFD63532.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289711074|gb|EFD75090.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|298496660|gb|EFI31954.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|326905227|gb|EGE52160.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328460165|gb|AEB05588.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339296211|gb|AEJ48322.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339299811|gb|AEJ51921.1| transposase [Mycobacterium tuberculosis CCDC5180]
 gi|339332748|emb|CCC28469.1| putative transposase [Mycobacterium africanum GM041182]
 gi|341603336|emb|CCC66017.1| possible transposase [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344221226|gb|AEN01857.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=225

 Score =  176 bits (447),  Expect = 7e-43, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  97   VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  156

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  157  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  216

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  217  LVKISTLAA  225


>gi|308377331|ref|ZP_07668489.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308348260|gb|EFP37111.1| transposase [Mycobacterium tuberculosis SUMu008]
Length=177

 Score =  176 bits (447),  Expect = 8e-43, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  49   VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  108

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  109  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  168

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  169  LVKISTLAA  177


>gi|308232447|ref|ZP_07664088.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308370250|ref|ZP_07666902.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308371330|ref|ZP_07667139.1| transposase [Mycobacterium tuberculosis SUMu003]
 17 more sequence titles
 gi|308372527|ref|ZP_07667401.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308373730|ref|ZP_07667642.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308374861|ref|ZP_07667884.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308376104|ref|ZP_07668195.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308378304|ref|ZP_07668717.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308379498|ref|ZP_07668972.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308380680|ref|ZP_07669250.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308213959|gb|EFO73358.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308324905|gb|EFP13756.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308329136|gb|EFP17987.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308332971|gb|EFP21822.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308336588|gb|EFP25439.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308340461|gb|EFP29312.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308344328|gb|EFP33179.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308352985|gb|EFP41836.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308356827|gb|EFP45678.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308360777|gb|EFP49628.1| transposase [Mycobacterium tuberculosis SUMu011]
Length=170

 Score =  176 bits (445),  Expect = 1e-42, Method: Compositional matrix adjust.
 Identities = 84/129 (66%), Positives = 99/129 (77%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V+ GNP DAPQLAPA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK K
Sbjct  42   VELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSK  101

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHN
Sbjct  102  PSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHN  161

Query  121  LVTISALPA  129
            LV IS L A
Sbjct  162  LVKISTLAA  170


>gi|289751636|ref|ZP_06511014.1| transposase [Mycobacterium tuberculosis T92]
 gi|289692223|gb|EFD59652.1| transposase [Mycobacterium tuberculosis T92]
Length=129

 Score =  171 bits (432),  Expect = 5e-41, Method: Compositional matrix adjust.
 Identities = 83/129 (65%), Positives = 97/129 (76%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            ++ GNP DAPQLAPAV  +  RAGR P TVTADRGYGE  V+  L ++GV+ V IPRKG+
Sbjct  1    MEHGNPHDAPQLAPAVEQITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGR  60

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQ RRAEE R +FRRT+KWRTG EGRIS LKR YGW+R  I G EGTR W  HG+  HN
Sbjct  61   PSQARRAEEQRPSFRRTVKWRTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHN  120

Query  121  LVTISALPA  129
            L+ IS+L A
Sbjct  121  LIKISSLAA  129


>gi|15610098|ref|NP_217477.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|31794137|ref|NP_856630.1| transposase [Mycobacterium bovis AF2122/97]
 gi|121638842|ref|YP_979066.1| putative transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 72 more sequence titles
 gi|148824150|ref|YP_001288904.1| transposase [Mycobacterium tuberculosis F11]
 gi|167970020|ref|ZP_02552297.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|224991334|ref|YP_002646023.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253797949|ref|YP_003030950.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254233047|ref|ZP_04926374.1| hypothetical protein TBCG_02899 [Mycobacterium tuberculosis C]
 gi|254365598|ref|ZP_04981643.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|254552037|ref|ZP_05142484.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 gi|289444522|ref|ZP_06434266.1| transposase [Mycobacterium tuberculosis T46]
 gi|289448630|ref|ZP_06438374.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289553250|ref|ZP_06442460.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289571156|ref|ZP_06451383.1| transposase [Mycobacterium tuberculosis T17]
 gi|289575666|ref|ZP_06455893.1| transposase [Mycobacterium tuberculosis K85]
 gi|289746759|ref|ZP_06506137.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289755076|ref|ZP_06514454.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289759086|ref|ZP_06518464.1| transposase [Mycobacterium tuberculosis T85]
 gi|289763139|ref|ZP_06522517.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|294993954|ref|ZP_06799645.1| transposase [Mycobacterium tuberculosis 210]
 gi|297635584|ref|ZP_06953364.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|297732582|ref|ZP_06961700.1| transposase [Mycobacterium tuberculosis KZN R506]
 gi|298526430|ref|ZP_07013839.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|306777251|ref|ZP_07415588.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|306781162|ref|ZP_07419499.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|306785800|ref|ZP_07424122.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|306789839|ref|ZP_07428161.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|306794652|ref|ZP_07432954.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|306798896|ref|ZP_07437198.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|306804741|ref|ZP_07441409.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|306808934|ref|ZP_07445602.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|306969032|ref|ZP_07481693.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|306973369|ref|ZP_07486030.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|307081077|ref|ZP_07490247.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|307085679|ref|ZP_07494792.1| transposase [Mycobacterium tuberculosis SUMu012]
 gi|313659914|ref|ZP_07816794.1| transposase [Mycobacterium tuberculosis KZN V2475]
 gi|339632967|ref|YP_004724609.1| transposase [Mycobacterium africanum GM041182]
 gi|1694870|emb|CAB05416.1| PROBABLE TRANSPOSASE [Mycobacterium tuberculosis H37Rv]
 gi|31619732|emb|CAD96672.1| PROBABLE TRANSPOSASE [Mycobacterium bovis AF2122/97]
 gi|121494490|emb|CAL72971.1| Probable transposase [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|124602106|gb|EAY61116.1| hypothetical protein TBCG_02899 [Mycobacterium tuberculosis C]
 gi|134151111|gb|EBA43156.1| transposase [Mycobacterium tuberculosis str. Haarlem]
 gi|148722677|gb|ABR07302.1| transposase [Mycobacterium tuberculosis F11]
 gi|224774449|dbj|BAH27255.1| putative transposase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253319452|gb|ACT24055.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|289417441|gb|EFD14681.1| transposase [Mycobacterium tuberculosis T46]
 gi|289421588|gb|EFD18789.1| transposase [Mycobacterium tuberculosis CPHL_A]
 gi|289437882|gb|EFD20375.1| transposase [Mycobacterium tuberculosis KZN 605]
 gi|289540097|gb|EFD44675.1| transposase [Mycobacterium tuberculosis K85]
 gi|289544910|gb|EFD48558.1| transposase [Mycobacterium tuberculosis T17]
 gi|289687287|gb|EFD54775.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289695663|gb|EFD63092.1| transposase [Mycobacterium tuberculosis EAS054]
 gi|289710645|gb|EFD74661.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289714650|gb|EFD78662.1| transposase [Mycobacterium tuberculosis T85]
 gi|298496224|gb|EFI31518.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|308214396|gb|EFO73795.1| transposase [Mycobacterium tuberculosis SUMu001]
 gi|308326054|gb|EFP14905.1| transposase [Mycobacterium tuberculosis SUMu002]
 gi|308329575|gb|EFP18426.1| transposase [Mycobacterium tuberculosis SUMu003]
 gi|308333723|gb|EFP22574.1| transposase [Mycobacterium tuberculosis SUMu004]
 gi|308337066|gb|EFP25917.1| transposase [Mycobacterium tuberculosis SUMu005]
 gi|308340879|gb|EFP29730.1| transposase [Mycobacterium tuberculosis SUMu006]
 gi|308344714|gb|EFP33565.1| transposase [Mycobacterium tuberculosis SUMu007]
 gi|308348694|gb|EFP37545.1| transposase [Mycobacterium tuberculosis SUMu008]
 gi|308353390|gb|EFP42241.1| transposase [Mycobacterium tuberculosis SUMu009]
 gi|308357266|gb|EFP46117.1| transposase [Mycobacterium tuberculosis SUMu010]
 gi|308361279|gb|EFP50130.1| transposase [Mycobacterium tuberculosis SUMu011]
 gi|308364795|gb|EFP53646.1| transposase [Mycobacterium tuberculosis SUMu012]
 gi|323718433|gb|EGB27606.1| transposase [Mycobacterium tuberculosis CDC1551A]
 gi|326904575|gb|EGE51508.1| transposase [Mycobacterium tuberculosis W-148]
 gi|328457724|gb|AEB03147.1| transposase [Mycobacterium tuberculosis KZN 4207]
 gi|339295797|gb|AEJ47908.1| transposase [Mycobacterium tuberculosis CCDC5079]
 gi|339299410|gb|AEJ51520.1| transposase [Mycobacterium tuberculosis CCDC5180]
 gi|339332323|emb|CCC28036.1| putative transposase [Mycobacterium africanum GM041182]
 gi|341602881|emb|CCC65559.1| probable transposase [Mycobacterium bovis BCG str. Moreau RDJ]
 gi|344220794|gb|AEN01425.1| transposase [Mycobacterium tuberculosis CTRI-2]
Length=129

 Score =  170 bits (430),  Expect = 7e-41, Method: Compositional matrix adjust.
 Identities = 83/129 (65%), Positives = 97/129 (76%), Gaps = 0/129 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            ++ GNP DAPQLAPAV  +  RAGR P TVTADRGYGE  V+  L ++GV+ V IPRKG+
Sbjct  1    MEHGNPHDAPQLAPAVERITTRAGRPPGTVTADRGYGEKRVEDDLHDLGVRTVAIPRKGR  60

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            PSQ RRAEE R +FRRT+KWRTG EGRIS LKR YGW+R  I G EGTR W  HG+  HN
Sbjct  61   PSQARRAEEQRPSFRRTVKWRTGSEGRISTLKRNYGWNRSCIDGTEGTRIWTRHGILTHN  120

Query  121  LVTISALPA  129
            L+ IS+L A
Sbjct  121  LIKISSLAA  129


>gi|298526868|ref|ZP_07014277.1| transposase [Mycobacterium tuberculosis 94_M4241A]
 gi|298496662|gb|EFI31956.1| transposase [Mycobacterium tuberculosis 94_M4241A]
Length=118

 Score =  157 bits (397),  Expect = 5e-37, Method: Compositional matrix adjust.
 Identities = 75/118 (64%), Positives = 90/118 (77%), Gaps = 0/118 (0%)

Query  12   LAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHR  71
            +APA+  + +R GR PR VTADRG G+A+V+  L ++GV+NV IPRK KPS  RRA EHR
Sbjct  1    MAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHR  60

Query  72   KAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA  129
            +AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G RTW GHGVFAHNLV IS L A
Sbjct  61   RAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA  118


>gi|289747214|ref|ZP_06506592.1| transposase [Mycobacterium tuberculosis 02_1987]
 gi|289687742|gb|EFD55230.1| transposase [Mycobacterium tuberculosis 02_1987]
Length=100

 Score =  139 bits (351),  Expect = 1e-31, Method: Compositional matrix adjust.
 Identities = 66/100 (66%), Positives = 78/100 (78%), Gaps = 0/100 (0%)

Query  30   VTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEGRIS  89
            +TADRG G+A+V+  L ++GV+NV IPRK KPS  RRA EHR+AFR  IKWRTG EGRI+
Sbjct  1    MTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGSEGRIN  60

Query  90   HLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTISALPA  129
            HLKR YGW+R  + G+ G RTW GHGVFAHNLV IS L A
Sbjct  61   HLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA  100


>gi|289759546|ref|ZP_06518924.1| hypothetical protein TBEG_03027 [Mycobacterium tuberculosis T85]
 gi|289715110|gb|EFD79122.1| hypothetical protein TBEG_03027 [Mycobacterium tuberculosis T85]
Length=80

 Score =  117 bits (293),  Expect = 5e-25, Method: Compositional matrix adjust.
 Identities = 55/80 (69%), Positives = 62/80 (78%), Gaps = 0/80 (0%)

Query  50   VKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTR  109
            ++NV IPRK KPS  RRA EHR+AFR  IKWRTG EGRI+HLKR YGW+R  + G+ G R
Sbjct  1    MRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGAR  60

Query  110  TWVGHGVFAHNLVTISALPA  129
            TW GHGVFAHNLV IS L A
Sbjct  61   TWCGHGVFAHNLVKISTLAA  80


>gi|253577715|ref|ZP_04855012.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251842893|gb|EES70945.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
Length=457

 Score = 96.7 bits (239),  Expect = 1e-18, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 67/121 (56%), Gaps = 0/121 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V +GNP D   L PAV    K+ G+ P+ V  DRG+     +  +TE+GVK   +PRKGK
Sbjct  328  VYEGNPSDDELLVPAVQAHIKQFGKAPQAVATDRGFSSKKNETAITELGVKRASLPRKGK  387

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
                R   E+   F+   ++R   E +IS LKR YG +R R  G  G++ WVG G+  HN
Sbjct  388  KGIARSEYENELWFKDLQRYRAAGEAKISLLKRKYGLNRSRYRGFVGSKCWVGFGILTHN  447

Query  121  L  121
            L
Sbjct  448  L  448


>gi|169830876|ref|YP_001716858.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831953|ref|YP_001717935.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831954|ref|YP_001717936.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831955|ref|YP_001717937.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169637720|gb|ACA59226.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638797|gb|ACA60303.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638798|gb|ACA60304.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638799|gb|ACA60305.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
Length=464

 Score = 95.9 bits (237),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 54/127 (43%), Positives = 67/127 (53%), Gaps = 0/127 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V  GNPPD   L P +A    R GR P     DRG+  A  +  L  +G++ + +P KGK
Sbjct  337  VMMGNPPDHQLLIPGIAEHIHRTGRVPEGTATDRGFWNAGNESALQALGIRKISLPYKGK  396

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             S  R   E +  FRR  +WR G EG IS LKR YG  R    GL G R WVG  V+ +N
Sbjct  397  RSHSRTGHERQSWFRRLQRWRAGQEGTISVLKRRYGLKRTLYRGLAGCRRWVGGAVWGYN  456

Query  121  LVTISAL  127
            L  I+ L
Sbjct  457  LNRIAKL  463


>gi|83590978|ref|YP_430987.1| transposase IS4 [Moorella thermoacetica ATCC 39073]
 gi|83573892|gb|ABC20444.1| transposase, IS4 family [Moorella thermoacetica ATCC 39073]
Length=174

 Score = 95.5 bits (236),  Expect = 2e-18, Method: Compositional matrix adjust.
 Identities = 56/127 (45%), Positives = 73/127 (58%), Gaps = 1/127 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            V QGNP D   L  AV    K     PR + ADRG+G +       ++GVK V +PRKGK
Sbjct  48   VLQGNPADDTLLLGAVEDHIKTFNHPPRALAADRGFGGSG-KSGCHQLGVKQVSLPRKGK  106

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             S+ RRA + +  F+R  +WR G E  IS LKR YG  R    G EGT TWVG+G+ A+N
Sbjct  107  ISKARRAYQLQSWFKRLQRWRAGGEATISLLKRKYGLRRSLSRGYEGTTTWVGYGILAYN  166

Query  121  LVTISAL  127
            L  ++ +
Sbjct  167  LHRLATM  173


>gi|308205889|gb|ADO19301.1| hypothetical protein Nfla_9401 [Nostoc flagelliforme str. Sunitezuoqi]
Length=180

 Score = 93.2 bits (230),  Expect = 1e-17, Method: Compositional matrix adjust.
 Identities = 49/125 (40%), Positives = 69/125 (56%), Gaps = 0/125 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            + +GNP D  QL P++    +  G +P+ VT DRG      +     +GVK V++P+ G 
Sbjct  42   ILKGNPHDTQQLIPSLDQHLENFGSSPKIVTTDRGVYSQTNENYAQLLGVKEVILPKGGY  101

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             S++R   E ++ F++  +W  G EGRIS LKR +G  R    G  G   WVG GV AHN
Sbjct  102  RSKERIKHERKRNFKKARRWHNGVEGRISFLKRCFGLQRCLYRGELGFCRWVGWGVIAHN  161

Query  121  LVTIS  125
            L  IS
Sbjct  162  LTIIS  166


>gi|147677689|ref|YP_001211904.1| hypothetical protein PTH_1354 [Pelotomaculum thermopropionicum 
SI]
 gi|147678361|ref|YP_001212576.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
 gi|146273786|dbj|BAF59535.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
 gi|146274458|dbj|BAF60207.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
Length=450

 Score = 92.0 bits (227),  Expect = 2e-17, Method: Compositional matrix adjust.
 Identities = 48/121 (40%), Positives = 69/121 (58%), Gaps = 0/121 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            + QGNP D   L PAV   KKR   +P  V  DRG+G  + ++ L  +GV+ +  P KG+
Sbjct  323  LYQGNPADDGLLIPAVEQHKKRFRSSPSAVATDRGFGSQSNEEALHTLGVRRISSPLKGR  382

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             S+ R   E +  F+   ++R   E +IS LKR YG +R    G  G++TWVG G++ HN
Sbjct  383  KSKKRMEYEAQLWFKDLQRFRAAGEAKISLLKRKYGLNRSLYRGFTGSKTWVGFGIWVHN  442

Query  121  L  121
            L
Sbjct  443  L  443


>gi|298251049|ref|ZP_06974853.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297549053|gb|EFH82920.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=362

 Score = 84.3 bits (207),  Expect = 5e-15, Method: Compositional matrix adjust.
 Identities = 47/120 (40%), Positives = 67/120 (56%), Gaps = 0/120 (0%)

Query  6    PPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDR  65
            P +  Q   A+A  +      PR +  DRG   A   ++    GVK V IP +GK SQ++
Sbjct  238  PHEHGQADEALAHHQPLFAHPPRWLVGDRGVHAAGTRERAQAAGVKVVAIPAEGKRSQEQ  297

Query  66   RAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTIS  125
            RA+EH +AF+R  +WR G EGRI  L+R YG  R    G +G + W+G G+ + NL  I+
Sbjct  298  RAQEHTRAFKRAYRWRAGIEGRIHSLRRDYGLRRCAYHGEDGMQRWIGLGIISSNLRHIA  357


>gi|298248375|ref|ZP_06972180.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297551034|gb|EFH84900.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 84.0 bits (206),  Expect = 6e-15, Method: Compositional matrix adjust.
 Identities = 47/120 (40%), Positives = 67/120 (56%), Gaps = 0/120 (0%)

Query  6    PPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDR  65
            P +  Q   A+A  +      PR +  DRG   A   ++    GVK V IP +GK SQ++
Sbjct  337  PHEHGQADEALAHHQPLFAHPPRWLVGDRGVHAAGTRERAQAAGVKVVAIPAEGKRSQEQ  396

Query  66   RAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTIS  125
            RA+EH +AF+R  +WR G EGRI  L+R YG  R    G +G + W+G G+ + NL  I+
Sbjct  397  RAQEHTRAFKRAYRWRAGIEGRIHSLRRDYGLRRCAYHGEDGMQRWIGLGIISSNLRHIA  456


>gi|298248369|ref|ZP_06972174.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297551028|gb|EFH84894.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 47/120 (40%), Positives = 67/120 (56%), Gaps = 0/120 (0%)

Query  6    PPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDR  65
            P +  Q   A+A  +      PR +  DRG   A   ++    GVK V IP +GK SQ++
Sbjct  337  PHEHGQADEALAHHQPLFAHPPRWLVGDRGVHAAGTRERAQAAGVKVVAIPAEGKRSQEQ  396

Query  66   RAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTIS  125
            RA+EH +AF+R  +WR G EGRI  L+R YG  R    G +G + W+G G+ + NL  I+
Sbjct  397  RAQEHTRAFKRAYRWRAGIEGRIHSLRRDYGLRRCAYHGEDGMQRWIGLGIISSNLRHIA  456


>gi|298241044|ref|ZP_06964851.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297554098|gb|EFH87962.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=461

 Score = 84.0 bits (206),  Expect = 7e-15, Method: Compositional matrix adjust.
 Identities = 47/120 (40%), Positives = 67/120 (56%), Gaps = 0/120 (0%)

Query  6    PPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDR  65
            P +  Q   A+A  +      PR +  DRG   A   ++    GVK V IP +GK SQ++
Sbjct  337  PHEHGQADEALAHHQPLFAHPPRWLVGDRGVHAAGTRERAQAAGVKVVAIPAEGKRSQEQ  396

Query  66   RAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTIS  125
            RA+EH +AF+R  +WR G EGRI  L+R YG  R    G +G + W+G G+ + NL  I+
Sbjct  397  RAQEHTRAFKRAYRWRAGIEGRIHSLRRDYGLRRCAYHGEDGMQRWIGLGIISSNLRHIA  456


>gi|298248371|ref|ZP_06972176.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
 gi|297551030|gb|EFH84896.1| transposase IS4 family protein [Ktedonobacter racemifer DSM 44963]
Length=324

 Score = 77.8 bits (190),  Expect = 5e-13, Method: Compositional matrix adjust.
 Identities = 49/121 (41%), Positives = 69/121 (58%), Gaps = 0/121 (0%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            +P +  Q   AV   ++   R P  VT DRG   A  +++L   GVK + IP  GK S++
Sbjct  199  HPEEHGQAIDAVVHHREVFARPPHLVTGDRGVHSADTEERLRAAGVKRIAIPAMGKVSEE  258

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNLVTI  124
            R+A E  + FRR  ++R G EGRI+ L+R YGW + R  G +G   W+G GV A NL  I
Sbjct  259  RQALERTRGFRRGYRFRAGIEGRIASLRRDYGWSKCRYHGQDGMERWLGLGVLASNLRHI  318

Query  125  S  125
            +
Sbjct  319  A  319


>gi|120553324|ref|YP_957675.1| transposase, IS4 family protein [Marinobacter aquaeolei VT8]
 gi|120554139|ref|YP_958490.1| transposase, IS4 family protein [Marinobacter aquaeolei VT8]
 gi|120554717|ref|YP_959068.1| transposase, IS4 family protein [Marinobacter aquaeolei VT8]
 gi|120555302|ref|YP_959653.1| transposase, IS4 family protein [Marinobacter aquaeolei VT8]
 gi|120323173|gb|ABM17488.1| transposase, IS4 family [Marinobacter aquaeolei VT8]
 gi|120323988|gb|ABM18303.1| transposase, IS4 family [Marinobacter aquaeolei VT8]
 gi|120324566|gb|ABM18881.1| transposase, IS4 family [Marinobacter aquaeolei VT8]
 gi|120325151|gb|ABM19466.1| transposase, IS4 family [Marinobacter aquaeolei VT8]
Length=446

 Score = 58.5 bits (140),  Expect = 3e-07, Method: Compositional matrix adjust.
 Identities = 37/127 (30%), Positives = 62/127 (49%), Gaps = 1/127 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            +++GNP D     P + + +   G+ PR+V AD GY   A       +G+K+V+  +   
Sbjct  318  IEEGNPGDKTLFLPVLDYHRSVLGKLPRSVVADGGYASQANVAAGRAMGLKHVVFHKPVG  377

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             S      +  K F+    +R G EG IS LKR +G  +    G +G + +V     ++N
Sbjct  378  VSLTAMGVK-SKTFKALRHFRAGIEGNISELKRAFGAAKAMWKGHDGFKAFVWASALSYN  436

Query  121  LVTISAL  127
            LV ++ L
Sbjct  437  LVRLARL  443


>gi|298527643|ref|ZP_07015047.1| transposase IS4 family protein [Desulfonatronospira thiodismutans 
ASO3-1]
 gi|298511295|gb|EFI35197.1| transposase IS4 family protein [Desulfonatronospira thiodismutans 
ASO3-1]
Length=446

 Score = 56.2 bits (134),  Expect = 2e-06, Method: Composition-based stats.
 Identities = 36/119 (31%), Positives = 55/119 (47%), Gaps = 1/119 (0%)

Query  3    QGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPS  62
            +GNP D+  +   V   KK   +TPR +  D G+       +  E GVK+V   +K +  
Sbjct  323  RGNPNDSSLVEEIVERQKKTLDKTPRKIAMDGGFASQNSLDKAKEAGVKDVCFAKK-RNL  381

Query  63   QDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHNL  121
                  +    +++   +R G E  IS +KR +G DR    G EG + +V   V A NL
Sbjct  382  NILDMVKSSYVYKKLRNFRAGIEAIISTMKRAFGLDRCTWQGWEGFKQYVWSSVVAFNL  440


>gi|16263346|ref|NP_436139.1| TRm17b transposase fragment [Sinorhizobium meliloti 1021]
 gi|14524028|gb|AAK65551.1| TRm17b transposase fragment [Sinorhizobium meliloti 1021]
Length=168

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 60/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  40   IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  99

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+V   V A+
Sbjct  100  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAY  157

Query  120  NLVTISAL  127
            NL   + L
Sbjct  158  NLALFARL  165


>gi|15966575|ref|NP_386928.1| putative partial transposase for ISRM17 protein [Sinorhizobium 
meliloti 1021]
 gi|15075846|emb|CAC47401.1| Putative partial transposase for ISRm17 protein [Sinorhizobium 
meliloti 1021]
Length=174

 Score = 55.8 bits (133),  Expect = 2e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 60/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  46   IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  105

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+V   V A+
Sbjct  106  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAY  163

Query  120  NLVTISAL  127
            NL   + L
Sbjct  164  NLALFARL  171


>gi|15966358|ref|NP_386711.1| transposase ISRM17 [Sinorhizobium meliloti 1021]
 gi|15966866|ref|NP_387219.1| transposase [Sinorhizobium meliloti 1021]
 gi|15075629|emb|CAC47184.1| Putative transposase for ISRm17 protein [Sinorhizobium meliloti 
1021]
 gi|15076138|emb|CAC47692.1| Putative transposase for insertion sequence ISRm17 [Sinorhizobium 
meliloti 1021]
 gi|333814851|gb|AEG07519.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|333814992|gb|AEG07660.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
Length=444

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 60/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  316  IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  375

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+V   V A+
Sbjct  376  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAY  433

Query  120  NLVTISAL  127
            NL   + L
Sbjct  434  NLALFARL  441


>gi|334317360|ref|YP_004549979.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334318742|ref|YP_004551301.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334319156|ref|YP_004551715.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 11 more sequence titles
 gi|334321120|ref|YP_004557749.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334321384|ref|YP_004557924.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|333812663|gb|AEG05332.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|333814337|gb|AEG07005.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|333814411|gb|AEG07079.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|333814424|gb|AEG07092.1| transposase IS4 family protein [Sinorhizobium meliloti BL225C]
 gi|334096354|gb|AEG54365.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334098859|gb|AEG56869.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334099169|gb|AEG57178.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334099583|gb|AEG57592.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334100172|gb|AEG58180.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
Length=444

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 60/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  316  IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  375

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+V   V A+
Sbjct  376  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAY  433

Query  120  NLVTISAL  127
            NL   + L
Sbjct  434  NLALFARL  441


>gi|124514705|gb|EAY56217.1| probable transposase [Leptospirillum rubarum]
Length=133

 Score = 55.5 bits (132),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  11   NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  67

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  68   RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  123


>gi|124514919|gb|EAY56430.1| probable transposase [Leptospirillum rubarum]
 gi|124515145|gb|EAY56656.1| probable transposase [Leptospirillum rubarum]
 gi|124515151|gb|EAY56662.1| probable transposase [Leptospirillum rubarum]
 gi|124515162|gb|EAY56673.1| probable transposase [Leptospirillum rubarum]
 gi|124515478|gb|EAY56988.1| transposase, IS5 family [Leptospirillum rubarum]
Length=184

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  62   NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  118

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  119  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  174


>gi|334320405|ref|YP_004557034.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334098144|gb|AEG56154.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
Length=447

 Score = 55.1 bits (131),  Expect = 3e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 60/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  319  IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  378

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+V   V A+
Sbjct  379  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAY  436

Query  120  NLVTISAL  127
            NL   + L
Sbjct  437  NLALFARL  444


>gi|206603356|gb|EDZ39836.1| Transposase [Leptospirillum sp. Group II '5-way CG']
Length=455

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  333  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  389

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  390  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  445


>gi|124516354|gb|EAY57862.1| transposase [Leptospirillum rubarum]
Length=455

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  333  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  389

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  390  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  445


>gi|124515501|gb|EAY57011.1| probable transposase [Leptospirillum rubarum]
Length=236

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  114  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  170

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  171  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  226


>gi|116253888|ref|YP_769726.1| transposon-related protein [Rhizobium leguminosarum bv. viciae 
3841]
 gi|116254976|ref|YP_770811.1| putative transposase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258536|emb|CAK09640.1| putative transposon-related protein [Rhizobium leguminosarum 
bv. viciae 3841]
 gi|115259624|emb|CAK11605.1| putative transposase [Rhizobium leguminosarum bv. viciae 3841]
Length=444

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 40/128 (32%), Positives = 59/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            V+ GNP D+ +L P +       G  PR   AD GY       Q    G++++   +K G
Sbjct  316  VEAGNPADSERLQPMLERHIAFYGAAPRQAAADGGYASRTNLSQAKAWGIRDMAFHKKCG  375

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D    + R  +R+   +R G E  IS LKR YG  R    GL+  + +V   V A+
Sbjct  376  LKIED--MVKSRWVYRKLRNFRAGIEAGISCLKRAYGLGRCTWRGLDHFKAYVWSSVVAY  433

Query  120  NLVTISAL  127
            NL   + L
Sbjct  434  NLALFARL  441


>gi|124515920|gb|EAY57429.1| putative transposase [Leptospirillum rubarum]
Length=455

 Score = 54.7 bits (130),  Expect = 4e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  333  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  389

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  390  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  445


>gi|124516081|gb|EAY57590.1| putative transposase [Leptospirillum rubarum]
Length=236

 Score = 54.7 bits (130),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  114  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  170

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  171  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  226


>gi|124514575|gb|EAY56087.1| probable transposase [Leptospirillum rubarum]
Length=261

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 39/116 (34%), Positives = 55/116 (48%), Gaps = 3/116 (2%)

Query  5    NPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQD  64
            N  D+  LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    
Sbjct  139  NRHDSTTLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---  195

Query  65   RRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
            R   EH + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  196  RGPLEHTRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  251


>gi|85858589|ref|YP_460791.1| transposase [Syntrophus aciditrophicus SB]
 gi|85860148|ref|YP_462350.1| transposase [Syntrophus aciditrophicus SB]
 gi|85721680|gb|ABC76623.1| transposase [Syntrophus aciditrophicus SB]
 gi|85723239|gb|ABC78182.1| transposase [Syntrophus aciditrophicus SB]
Length=448

 Score = 53.9 bits (128),  Expect = 8e-06, Method: Compositional matrix adjust.
 Identities = 41/128 (33%), Positives = 57/128 (45%), Gaps = 7/128 (5%)

Query  3    QGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEV--GVKNVLIPRKGK  60
            Q N  D   L   +  +K   G+ PR V ADRG+ ++   Q+      G+K + IP+KGK
Sbjct  320  QHNVADVKTLGRVITGIKTNVGQRPREVAADRGFDQSLKKQENCRRRWGIKRIAIPKKGK  379

Query  61   -PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
             P  D +       FR+ +K R   E  I HLK  +  +R R  G  G    V     A 
Sbjct  380  TPHPDSKES----WFRKALKQRVKIEPVIGHLKSDHRMNRCRYKGAAGDTVNVVWATLAW  435

Query  120  NLVTISAL  127
            N+  I  L
Sbjct  436  NMKKIVQL  443


>gi|13475196|ref|NP_106760.1| transposase [Mesorhizobium loti MAFF303099]
 gi|14025947|dbj|BAB52546.1| transposase [Mesorhizobium loti MAFF303099]
Length=291

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 38/127 (30%), Positives = 56/127 (45%), Gaps = 1/127 (0%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGK  60
            ++ GNP D+ +L   +       G  PR   AD GY   A  +Q    GV+++   +K  
Sbjct  163  IEAGNPADSERLLLMLERHIAFYGEPPRQAAADGGYASRANLRQAKAWGVRDMAFHKKSA  222

Query  61   PSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
               +      R  +R+   +R G E  IS LKR YG  R    GL   + +V   V A+N
Sbjct  223  LRIEDMVSS-RWVYRKLRNFRAGIEASISCLKRAYGLARCTWRGLNHFKAYVWSSVVAYN  281

Query  121  LVTISAL  127
            L   + L
Sbjct  282  LALFTRL  288


>gi|206602031|gb|EDZ38513.1| transposase [Leptospirillum sp. Group II '5-way CG']
Length=117

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 37/110 (34%), Positives = 52/110 (48%), Gaps = 3/110 (2%)

Query  11   QLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEH  70
             LA ++   ++  G  P  + ADRGYG    +       +  V IP+KGK    R   EH
Sbjct  1    MLADSLTGWEEATGGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---RGPLEH  57

Query  71   RKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             + F+R +  R G E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  58   TRWFKRLVASRAGIEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  107


>gi|334319413|ref|YP_004551972.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
 gi|334099840|gb|AEG57849.1| transposase IS4 family protein [Sinorhizobium meliloti AK83]
Length=444

 Score = 52.8 bits (125),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 40/128 (32%), Positives = 59/128 (47%), Gaps = 3/128 (2%)

Query  1    VQQGNPPDAPQLAPAVAWVKKRAGRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRK-G  59
            ++ GNP D+ +L P +       G  PR   AD GY      +Q    GV+++   +K G
Sbjct  316  IEAGNPADSERLLPLLERHIAFYGEAPRQAAADGGYASRENLRQAKAWGVRDMAFHKKSG  375

Query  60   KPSQDRRAEEHRKAFRRTIKWRTGCEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAH  119
               +D      R  +R+   +R G E  IS LKR YG  R    GL+  +T+    V A+
Sbjct  376  LRIED--MVRSRWVYRKLRNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYDWSSVVAY  433

Query  120  NLVTISAL  127
            NL   + L
Sbjct  434  NLALFARL  441


>gi|124514331|gb|EAY55845.1| putative transposase [Leptospirillum rubarum]
Length=114

 Score = 52.0 bits (123),  Expect = 3e-05, Method: Compositional matrix adjust.
 Identities = 35/97 (37%), Positives = 46/97 (48%), Gaps = 3/97 (3%)

Query  24   GRTPRTVTADRGYGEAAVDQQLTEVGVKNVLIPRKGKPSQDRRAEEHRKAFRRTIKWRTG  83
            G  P  + ADRGYG    +       +  V IP+KGK    R   EH + F+R +  R G
Sbjct  11   GGLPTALAADRGYGTQDKNTPPALSRIPKVAIPKKGKI---RGPLEHTRWFKRLVASRAG  67

Query  84   CEGRISHLKRGYGWDRGRIGGLEGTRTWVGHGVFAHN  120
             E  I+HLK+ +G  R R  G  G +  V   V A N
Sbjct  68   IEAVIAHLKQDHGMGRCRYKGFSGDQMNVSWAVLAWN  104



Lambda     K      H
   0.318    0.136    0.431 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128283502052


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40