BLASTP 2.2.25+


Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.



Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.



Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
           15,229,318 sequences; 5,219,829,388 total letters



Query= Rv1036c

Length=112
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

gi|15608176|ref|NP_215552.1|  truncated IS1560 transposase [Mycob...   225    2e-57
gi|340626047|ref|YP_004744499.1|  putative IS1560 transposase [My...   224    5e-57
gi|289749569|ref|ZP_06508947.1|  transposase [Mycobacterium tuber...   223    6e-57
gi|148822245|ref|YP_001286999.1|  transposase [Mycobacterium tube...   216    9e-55
gi|167966937|ref|ZP_02549214.1|  transposase [Mycobacterium tuber...   189    1e-46
gi|307086165|ref|ZP_07495278.1|  hypothetical protein TMLG_02974 ...   188    2e-46
gi|15610522|ref|NP_217903.1|  transposase [Mycobacterium tubercul...   153    7e-36
gi|111025371|ref|YP_707791.1|  transposase [Rhodococcus jostii RH...   149    2e-34
gi|111025277|ref|YP_707697.1|  transposase [Rhodococcus jostii RH...   146    9e-34
gi|111026321|ref|YP_708604.1|  IS5 family transposase [Rhodococcu...   145    2e-33
gi|147677689|ref|YP_001211904.1|  hypothetical protein PTH_1354 [...   108    3e-22
gi|83590979|ref|YP_430988.1|  IS5 family transposase [Moorella th...  95.1    3e-18
gi|289571621|ref|ZP_06451848.1|  transposase [Mycobacterium tuber...  87.8    4e-16
gi|253577715|ref|ZP_04855012.1|  transposase [Paenibacillus sp. o...  87.4    7e-16
gi|240170673|ref|ZP_04749332.1|  transposase [Mycobacterium kansa...  82.8    1e-14
gi|169830876|ref|YP_001716858.1|  putative methyl-accepting chemo...  69.3    2e-10
gi|289763567|ref|ZP_06522945.1|  transposase [Mycobacterium tuber...  60.1    1e-07
gi|169830618|ref|YP_001716600.1|  hypothetical protein Daud_0420 ...  54.3    6e-06
gi|240170092|ref|ZP_04748751.1|  transposase [Mycobacterium kansa...  53.5    1e-05
gi|195441975|ref|XP_002068736.1|  GK17867 [Drosophila willistoni]...  36.2    1.6  
gi|195381513|ref|XP_002049493.1|  GJ21617 [Drosophila virilis] >g...  36.2    1.6  
gi|206603356|gb|EDZ39836.1|  Transposase [Leptospirillum sp. Grou...  36.2    1.8  
gi|124515920|gb|EAY57429.1|  putative transposase [Leptospirillum...  36.2    1.8  
gi|124516354|gb|EAY57862.1|  transposase [Leptospirillum rubarum]     36.2    1.8  
gi|114571176|ref|YP_757856.1|  ABC transporter-like protein [Mari...  35.0    3.2  
gi|332667916|ref|YP_004450704.1|  hypothetical protein Halhy_6008...  35.0    3.5  
gi|124515144|gb|EAY56655.1|  probable transposase [Leptospirillum...  35.0    4.0  
gi|124514574|gb|EAY56086.1|  probable transposase [Leptospirillum...  35.0    4.1  
gi|124514490|gb|EAY56003.1|  probable transposase [Leptospirillum...  34.7    4.2  
gi|124515502|gb|EAY57012.1|  probable transposase [Leptospirillum...  34.7    4.2  
gi|124514920|gb|EAY56431.1|  probable transposase [Leptospirillum...  34.7    4.3  
gi|124516508|gb|EAY58016.1|  transposase [Leptospirillum rubarum]     34.7    4.7  
gi|124515153|gb|EAY56664.1|  probable transposase [Leptospirillum...  34.7    4.7  
gi|124515160|gb|EAY56671.1|  probable transposase [Leptospirillum...  34.7    4.8  
gi|124514704|gb|EAY56216.1|  probable transposase [Leptospirillum...  34.3    6.0  


>gi|15608176|ref|NP_215552.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Rv]
 gi|31792228|ref|NP_854721.1| IS1560 transposase [Mycobacterium bovis AF2122/97]
 gi|121636966|ref|YP_977189.1| putative IS1560 transposase [Mycobacterium bovis BCG str. Pasteur 
1173P2]
 39 more sequence titles
 Length=112

 Score =  225 bits (574),  Expect = 2e-57, Method: Compositional matrix adjust.
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    LIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60
            +IPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD
Sbjct  1    MIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60

Query  61   DPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            DPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT
Sbjct  61   DPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|340626047|ref|YP_004744499.1| putative IS1560 transposase [Mycobacterium canettii CIPT 140010059]
 gi|340004237|emb|CCC43378.1| putative IS1560 transposase (fragment) [Mycobacterium canettii 
CIPT 140010059]
Length=112

 Score =  224 bits (570),  Expect = 5e-57, Method: Compositional matrix adjust.
 Identities = 110/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    LIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60
            +IPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD
Sbjct  1    MIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60

Query  61   DPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            DPAFFAPFVPFFDPRRGRPSTPMEV+LQLMFVKFRYRLGYESLCREVADSIT
Sbjct  61   DPAFFAPFVPFFDPRRGRPSTPMEVFLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|289749569|ref|ZP_06508947.1| transposase [Mycobacterium tuberculosis T92]
 gi|289690156|gb|EFD57585.1| transposase [Mycobacterium tuberculosis T92]
Length=112

 Score =  223 bits (568),  Expect = 6e-57, Method: Compositional matrix adjust.
 Identities = 110/112 (99%), Positives = 111/112 (99%), Gaps = 0/112 (0%)

Query  1    LIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60
            +IPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD
Sbjct  1    MIPGRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLD  60

Query  61   DPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            DPA FAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT
Sbjct  61   DPALFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112


>gi|148822245|ref|YP_001286999.1| transposase [Mycobacterium tuberculosis F11]
 gi|167968537|ref|ZP_02550814.1| truncated IS1560 transposase [Mycobacterium tuberculosis H37Ra]
 gi|254231328|ref|ZP_04924655.1| hypothetical protein TBCG_01024 [Mycobacterium tuberculosis C]
 22 more sequence titles
 Length=107

 Score =  216 bits (550),  Expect = 9e-55, Method: Compositional matrix adjust.
 Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%)

Query  6    MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFF  65
            MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFF
Sbjct  1    MVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFF  60

Query  66   APFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            APFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT
Sbjct  61   APFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  107


>gi|167966937|ref|ZP_02549214.1| transposase [Mycobacterium tuberculosis H37Ra]
 gi|253800432|ref|YP_003033433.1| transposase [Mycobacterium tuberculosis KZN 1435]
 gi|254552491|ref|ZP_05142938.1| transposase [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
 8 more sequence titles
 Length=259

 Score =  189 bits (480),  Expect = 1e-46, Method: Compositional matrix adjust.
 Identities = 91/109 (84%), Positives = 99/109 (91%), Gaps = 0/109 (0%)

Query  4    GRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPA  63
            G + L+WEDGLNALVAEGIEAIVFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD A
Sbjct  4    GWLALSWEDGLNALVAEGIEAIVFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSA  63

Query  64   FFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            FF PFVPFFDPR GRPS PME YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  64   FFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSIT  112


>gi|307086165|ref|ZP_07495278.1| hypothetical protein TMLG_02974 [Mycobacterium tuberculosis SUMu012]
 gi|308364381|gb|EFP53232.1| hypothetical protein TMLG_02974 [Mycobacterium tuberculosis SUMu012]
Length=200

 Score =  188 bits (478),  Expect = 2e-46, Method: Compositional matrix adjust.
 Identities = 91/109 (84%), Positives = 99/109 (91%), Gaps = 0/109 (0%)

Query  4    GRMVLNWEDGLNALVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPA  63
            G + L+WEDGLNALVAEGIEAIVFRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD A
Sbjct  4    GWLALSWEDGLNALVAEGIEAIVFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSA  63

Query  64   FFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            FF PFVPFFDPR GRPS PME YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  64   FFCPFVPFFDPRMGRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSIT  112


>gi|15610522|ref|NP_217903.1| transposase [Mycobacterium tuberculosis H37Rv]
 gi|15842979|ref|NP_338016.1| IS1560 transposase [Mycobacterium tuberculosis CDC1551]
 gi|31794566|ref|NP_857059.1| transposase [Mycobacterium bovis AF2122/97]
 61 more sequence titles
 Length=234

 Score =  153 bits (387),  Expect = 7e-36, Method: Compositional matrix adjust.
 Identities = 72/87 (83%), Positives = 79/87 (91%), Gaps = 0/87 (0%)

Query  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85
            +FRT+GDQ  LWES+LP+E+RRLPEELARVDALLDD AFF PFVPFFDPR GRPS PME 
Sbjct  1    MFRTVGDQASLWESVLPEELRRLPEELARVDALLDDSAFFCPFVPFFDPRMGRPSIPMET  60

Query  86   YLQLMFVKFRYRLGYESLCREVADSIT  112
            YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  61   YLRLMFLKFRYRLGYESLCREVTDSIT  87


>gi|111025371|ref|YP_707791.1| transposase [Rhodococcus jostii RHA1]
 gi|110824350|gb|ABG99633.1| transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  149 bits (375),  Expect = 2e-34, Method: Compositional matrix adjust.
 Identities = 70/87 (81%), Positives = 79/87 (91%), Gaps = 0/87 (0%)

Query  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85
            +FRT+GDQ  L+ES+LP E+ RLP EL RVDALLDDPAFFAPFVP+FDPR GRPSTPME 
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDALLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  86   YLQLMFVKFRYRLGYESLCREVADSIT  112
            YL+LMF+KFRYRLGYESLCREV+DSIT
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSIT  87


>gi|111025277|ref|YP_707697.1| transposase [Rhodococcus jostii RHA1]
 gi|110824256|gb|ABG99539.1| probable transposase [Rhodococcus jostii RHA1]
Length=479

 Score =  146 bits (369),  Expect = 9e-34, Method: Compositional matrix adjust.
 Identities = 69/87 (80%), Positives = 78/87 (90%), Gaps = 0/87 (0%)

Query  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85
            +FRT+GDQ  L+ES+LP E+ RLP EL RVDALLDDPAFFAPFVP+FDPR GRPSTPME 
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDALLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  86   YLQLMFVKFRYRLGYESLCREVADSIT  112
            YL+LMF+KFRYRLGYESLCREV+DS T
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSFT  87


>gi|111026321|ref|YP_708604.1| IS5 family transposase [Rhodococcus jostii RHA1]
 gi|110825164|gb|ABH00446.1| possible transposase, IS5 family [Rhodococcus jostii RHA1]
Length=337

 Score =  145 bits (367),  Expect = 2e-33, Method: Compositional matrix adjust.
 Identities = 68/87 (79%), Positives = 77/87 (89%), Gaps = 0/87 (0%)

Query  26   VFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEV  85
            +FRT+GDQ  L+ES+LP E+ RLP EL RVD LLDDPAFFAPFVP+FDPR GRPSTPME 
Sbjct  1    MFRTVGDQPSLFESVLPQELLRLPAELERVDGLLDDPAFFAPFVPYFDPRIGRPSTPMET  60

Query  86   YLQLMFVKFRYRLGYESLCREVADSIT  112
            YL+LMF+KFRYRLGYESLCREV+DS T
Sbjct  61   YLRLMFLKFRYRLGYESLCREVSDSFT  87


>gi|147677689|ref|YP_001211904.1| hypothetical protein PTH_1354 [Pelotomaculum thermopropionicum 
SI]
 gi|147678361|ref|YP_001212576.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
 gi|146273786|dbj|BAF59535.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
 gi|146274458|dbj|BAF60207.1| transposase and inactivated derivatives [Pelotomaculum thermopropionicum 
SI]
Length=450

 Score =  108 bits (269),  Expect = 3e-22, Method: Composition-based stats.
 Identities = 45/81 (56%), Positives = 63/81 (78%), Gaps = 0/81 (0%)

Query  32   DQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMF  91
            +Q  LW+++LP+  R LP ELA++D +LDDP F  PF+  F+ RRGRP+ P+E YL+LM+
Sbjct  7    NQISLWDTVLPESFRSLPAELAKIDDILDDPVFMQPFIAKFNTRRGRPTIPIETYLRLMY  66

Query  92   VKFRYRLGYESLCREVADSIT  112
            +K RY+LGYE+L +EV DSIT
Sbjct  67   LKRRYQLGYETLIKEVGDSIT  87


>gi|83590979|ref|YP_430988.1| IS5 family transposase [Moorella thermoacetica ATCC 39073]
 gi|83573893|gb|ABC20445.1| transposase, IS5 family [Moorella thermoacetica ATCC 39073]
Length=260

 Score = 95.1 bits (235),  Expect = 3e-18, Method: Compositional matrix adjust.
 Identities = 46/79 (59%), Positives = 58/79 (74%), Gaps = 0/79 (0%)

Query  33   QCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFV  92
            Q  LW+ LLP ++ +L  ELARVD LLDD  F APF+  F+ R GRP+ PME YL+LM++
Sbjct  8    QLTLWDVLLPSDLVQLNPELARVDELLDDDRFMAPFISRFEARLGRPTIPMETYLRLMYL  67

Query  93   KFRYRLGYESLCREVADSI  111
            K+RY LGYE L +EV DSI
Sbjct  68   KYRYGLGYEVLVQEVNDSI  86


>gi|289571621|ref|ZP_06451848.1| transposase [Mycobacterium tuberculosis T17]
 gi|289545375|gb|EFD49023.1| transposase [Mycobacterium tuberculosis T17]
Length=240

 Score = 87.8 bits (216),  Expect = 4e-16, Method: Compositional matrix adjust.
 Identities = 49/96 (52%), Positives = 60/96 (63%), Gaps = 5/96 (5%)

Query  17   LVAEGIEAIVFRTLGDQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRR  76
            L+ +G+  IVF    DQ  +  +    E  R P+    +   +   +   P VPFFDPR 
Sbjct  3    LLRKGLRPIVFSYCSDQHRVDRAA---ESARCPKSCPVMRCSMIRRSL--PVVPFFDPRM  57

Query  77   GRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            GRPS PME YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  58   GRPSIPMETYLRLMFLKFRYRLGYESLCREVTDSIT  93


>gi|253577715|ref|ZP_04855012.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251842893|gb|EES70945.1| transposase [Paenibacillus sp. oral taxon 786 str. D14]
Length=457

 Score = 87.4 bits (215),  Expect = 7e-16, Method: Composition-based stats.
 Identities = 40/83 (49%), Positives = 56/83 (68%), Gaps = 2/83 (2%)

Query  32   DQCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFF--DPRRGRPSTPMEVYLQL  89
            +Q  +W+++LP+ VR+LP ELA +D LLDD  F  PF        + GRP+  +E Y++L
Sbjct  10   EQLTIWDAILPESVRKLPVELAIIDQLLDDDRFLQPFTELHPKGKKSGRPTLAIEKYIRL  69

Query  90   MFVKFRYRLGYESLCREVADSIT  112
            M +K +Y LGYESL +EV DSIT
Sbjct  70   MVLKHKYNLGYESLVKEVGDSIT  92


>gi|240170673|ref|ZP_04749332.1| transposase [Mycobacterium kansasii ATCC 12478]
Length=68

 Score = 82.8 bits (203),  Expect = 1e-14, Method: Compositional matrix adjust.
 Identities = 51/58 (88%), Positives = 56/58 (97%), Gaps = 0/58 (0%)

Query  55   VDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            +DALLDDPAFFAPFV FFDPR GRPSTPME+YL+LMF+KFRYRLGYESLCREV+DSIT
Sbjct  1    MDALLDDPAFFAPFVAFFDPRIGRPSTPMEIYLRLMFLKFRYRLGYESLCREVSDSIT  58


>gi|169830876|ref|YP_001716858.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831953|ref|YP_001717935.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831954|ref|YP_001717936.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169831955|ref|YP_001717937.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169637720|gb|ACA59226.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638797|gb|ACA60303.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638798|gb|ACA60304.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
 gi|169638799|gb|ACA60305.1| putative methyl-accepting chemotaxis sensory transducer [Candidatus 
Desulforudis audaxviator MP104C]
Length=464

 Score = 69.3 bits (168),  Expect = 2e-10, Method: Composition-based stats.
 Identities = 35/80 (44%), Positives = 47/80 (59%), Gaps = 0/80 (0%)

Query  33   QCWLWESLLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFV  92
            Q    + +LP EV  LPE+LA++DA LDD  FF PF   +    GRPS P E YL++  +
Sbjct  11   QVSFLDYILPPEVLELPEDLAKLDAWLDDERFFEPFQDKYHRCLGRPSVPAETYLRMTAL  70

Query  93   KFRYRLGYESLCREVADSIT  112
            K +YRL    +C  V D I+
Sbjct  71   KHQYRLSDRQVCALVKDRIS  90


>gi|289763567|ref|ZP_06522945.1| transposase [Mycobacterium tuberculosis GM 1503]
 gi|289711073|gb|EFD75089.1| transposase [Mycobacterium tuberculosis GM 1503]
Length=177

 Score = 60.1 bits (144),  Expect = 1e-07, Method: Compositional matrix adjust.
 Identities = 26/30 (87%), Positives = 28/30 (94%), Gaps = 0/30 (0%)

Query  83   MEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            ME YL+LMF+KFRYRLGYESLCREV DSIT
Sbjct  1    METYLRLMFLKFRYRLGYESLCREVTDSIT  30


>gi|169830618|ref|YP_001716600.1| hypothetical protein Daud_0420 [Candidatus Desulforudis audaxviator 
MP104C]
 gi|169637462|gb|ACA58968.1| hypothetical protein Daud_0420 [Candidatus Desulforudis audaxviator 
MP104C]
Length=246

 Score = 54.3 bits (129),  Expect = 6e-06, Method: Compositional matrix adjust.
 Identities = 26/64 (41%), Positives = 37/64 (58%), Gaps = 0/64 (0%)

Query  49   PEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVA  108
            PE LA++D  LDD  FF PF   +    GRPS P E YL++  ++ +Y L    LC +V 
Sbjct  26   PEHLAKMDRWLDDKRFFTPFQDKYHQFWGRPSVPAETYLRMRALQQQYGLSDRELCDQVG  85

Query  109  DSIT  112
            D ++
Sbjct  86   DRLS  89


>gi|240170092|ref|ZP_04748751.1| transposase [Mycobacterium kansasii ATCC 12478]
Length=75

 Score = 53.5 bits (127),  Expect = 1e-05, Method: Compositional matrix adjust.
 Identities = 26/42 (62%), Positives = 32/42 (77%), Gaps = 0/42 (0%)

Query  71   FFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLCREVADSIT  112
            FFDPR  R S P E +L+L F +FRYRLG+ESL R V+DSI+
Sbjct  4    FFDPRIERRSDPAETHLRLPFRQFRYRLGFESLGRGVSDSIS  45


>gi|195441975|ref|XP_002068736.1| GK17867 [Drosophila willistoni]
 gi|194164821|gb|EDW79722.1| GK17867 [Drosophila willistoni]
Length=784

 Score = 36.2 bits (82),  Expect = 1.6, Method: Composition-based stats.
 Identities = 22/76 (29%), Positives = 35/76 (47%), Gaps = 4/76 (5%)

Query  40   LLPDEVRRLPEELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFV----KFR  95
            L+ + +   PE+L  +  +L  P+  APF+ F  P  G+ +T +E  LQL       K  
Sbjct  293  LINETIASNPEQLQAIGRILAGPSLKAPFIVFGPPGTGKTTTIVEAILQLRLAQPSCKIL  352

Query  96   YRLGYESLCREVADSI  111
               G  S C  +A  +
Sbjct  353  VTAGSNSACDTIAQRL  368


>gi|195381513|ref|XP_002049493.1| GJ21617 [Drosophila virilis]
 gi|194144290|gb|EDW60686.1| GJ21617 [Drosophila virilis]
Length=880

 Score = 36.2 bits (82),  Expect = 1.6, Method: Composition-based stats.
 Identities = 20/63 (32%), Positives = 33/63 (53%), Gaps = 4/63 (6%)

Query  50   EELARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRL----GYESLCR  105
            E+L  V  +++ P+  AP++ F  P  G+ +T +E  LQL   + R R+    G  S C 
Sbjct  293  EQLQAVQHIVNGPSSLAPYIVFGPPGTGKTTTIVEAILQLRLRQPRSRILVTAGSNSACD  352

Query  106  EVA  108
             +A
Sbjct  353  TIA  355


>gi|206603356|gb|EDZ39836.1| Transposase [Leptospirillum sp. Group II '5-way CG']
Length=455

 Score = 36.2 bits (82),  Expect = 1.8, Method: Composition-based stats.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124515920|gb|EAY57429.1| putative transposase [Leptospirillum rubarum]
Length=455

 Score = 36.2 bits (82),  Expect = 1.8, Method: Composition-based stats.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124516354|gb|EAY57862.1| transposase [Leptospirillum rubarum]
Length=455

 Score = 36.2 bits (82),  Expect = 1.8, Method: Composition-based stats.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|114571176|ref|YP_757856.1| ABC transporter-like protein [Maricaulis maris MCS10]
 gi|114341638|gb|ABI66918.1| ABC transporter related protein [Maricaulis maris MCS10]
Length=602

 Score = 35.0 bits (79),  Expect = 3.2, Method: Compositional matrix adjust.
 Identities = 15/33 (46%), Positives = 22/33 (67%), Gaps = 0/33 (0%)

Query  39   SLLPDEVRRLPEELARVDALLDDPAFFAPFVPF  71
             LLPDE+ +L +E+AR++A + DP  FA    F
Sbjct  537  KLLPDEIEKLSQEIARLEADMADPKLFADSARF  569


>gi|332667916|ref|YP_004450704.1| hypothetical protein Halhy_6008 [Haliscomenobacter hydrossis 
DSM 1100]
 gi|332336730|gb|AEE53831.1| hypothetical protein Halhy_6008 [Haliscomenobacter hydrossis 
DSM 1100]
Length=273

 Score = 35.0 bits (79),  Expect = 3.5, Method: Compositional matrix adjust.
 Identities = 15/34 (45%), Positives = 25/34 (74%), Gaps = 0/34 (0%)

Query  36   LWESLLPDEVRRLPEELARVDALLDDPAFFAPFV  69
            L +S+  +EVR  PEE+ ++DA +D P FF+P++
Sbjct  171  LRDSVQFNEVRIAPEEMGQIDASIDYPRFFSPYL  204


>gi|124515144|gb|EAY56655.1| probable transposase [Leptospirillum rubarum]
Length=182

 Score = 35.0 bits (79),  Expect = 4.0, Method: Compositional matrix adjust.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124514574|gb|EAY56086.1| probable transposase [Leptospirillum rubarum]
Length=234

 Score = 35.0 bits (79),  Expect = 4.1, Method: Compositional matrix adjust.
 Identities = 17/57 (30%), Positives = 30/57 (53%), Gaps = 1/57 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLC  104
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++ 
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAVV  78


>gi|124514490|gb|EAY56003.1| probable transposase [Leptospirillum rubarum]
Length=197

 Score = 34.7 bits (78),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124515502|gb|EAY57012.1| probable transposase [Leptospirillum rubarum]
Length=225

 Score = 34.7 bits (78),  Expect = 4.2, Method: Compositional matrix adjust.
 Identities = 17/57 (30%), Positives = 30/57 (53%), Gaps = 1/57 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLC  104
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++ 
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAVV  78


>gi|124514920|gb|EAY56431.1| probable transposase [Leptospirillum rubarum]
Length=263

 Score = 34.7 bits (78),  Expect = 4.3, Method: Compositional matrix adjust.
 Identities = 17/57 (30%), Positives = 30/57 (53%), Gaps = 1/57 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLC  104
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++ 
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAVV  78


>gi|124516508|gb|EAY58016.1| transposase [Leptospirillum rubarum]
Length=202

 Score = 34.7 bits (78),  Expect = 4.7, Method: Compositional matrix adjust.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124515153|gb|EAY56664.1| probable transposase [Leptospirillum rubarum]
Length=294

 Score = 34.7 bits (78),  Expect = 4.7, Method: Compositional matrix adjust.
 Identities = 17/57 (30%), Positives = 30/57 (53%), Gaps = 1/57 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESLC  104
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++ 
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAVV  78


>gi|124515160|gb|EAY56671.1| probable transposase [Leptospirillum rubarum]
Length=216

 Score = 34.7 bits (78),  Expect = 4.8, Method: Compositional matrix adjust.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77


>gi|124514704|gb|EAY56216.1| probable transposase [Leptospirillum rubarum]
Length=119

 Score = 34.3 bits (77),  Expect = 6.0, Method: Compositional matrix adjust.
 Identities = 17/56 (31%), Positives = 30/56 (54%), Gaps = 1/56 (1%)

Query  49   PEE-LARVDALLDDPAFFAPFVPFFDPRRGRPSTPMEVYLQLMFVKFRYRLGYESL  103
            PE  L ++   +D  A      P++ P +GRP+ P  + + LM +K R+ L  E++
Sbjct  22   PEHPLMKLSEKIDWAAIDGVLAPYYSPGKGRPAKPTRLMVGLMILKHRFDLSDEAV  77



Lambda     K      H
   0.327    0.145    0.465 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Effective search space used: 128047486336


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Sep 5, 2011  4:36 AM
  Number of letters in database: 5,219,829,388
  Number of sequences in database:  15,229,318



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40