BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1039c Length=391 Score E Sequences producing significant alignments: (Bits) Value gi|15840468|ref|NP_335505.1| PPE family protein [Mycobacterium t... 734 0.0 gi|289753101|ref|ZP_06512479.1| PPE family protein [Mycobacteriu... 733 0.0 gi|339631101|ref|YP_004722743.1| PPE family protein [Mycobacteri... 733 0.0 gi|253799929|ref|YP_003032930.1| PPE family protein [Mycobacteri... 733 0.0 gi|121636969|ref|YP_977192.1| PPE family protein [Mycobacterium ... 732 0.0 gi|340626050|ref|YP_004744502.1| PPE family protein [Mycobacteri... 732 0.0 gi|344218866|gb|AEM99496.1| PPE family protein [Mycobacterium tu... 729 0.0 gi|254550024|ref|ZP_05140471.1| PPE family protein [Mycobacteriu... 702 0.0 gi|297730553|ref|ZP_06959671.1| PPE family protein [Mycobacteriu... 702 0.0 gi|118619703|ref|YP_908035.1| PPE family protein [Mycobacterium ... 444 2e-122 gi|183984423|ref|YP_001852714.1| PPE family protein, PPE15 [Myco... 437 2e-120 gi|15842306|ref|NP_337343.1| PPE family protein [Mycobacterium t... 367 2e-99 gi|254232866|ref|ZP_04926193.1| PPE family protein [Mycobacteriu... 365 8e-99 gi|340627770|ref|YP_004746222.1| PPE family protein [Mycobacteri... 364 1e-98 gi|57117022|ref|YP_177906.1| PPE family protein [Mycobacterium t... 364 1e-98 gi|344220596|gb|AEN01227.1| PPE family protein [Mycobacterium tu... 363 2e-98 gi|183981963|ref|YP_001850254.1| PPE family protein, PPE15_1 [My... 363 2e-98 gi|289553446|ref|ZP_06442656.1| PPE family protein [Mycobacteriu... 362 6e-98 gi|31793943|ref|NP_856436.1| PPE family protein [Mycobacterium b... 361 1e-97 gi|148823956|ref|YP_001288710.1| PPE family protein [Mycobacteri... 360 2e-97 gi|289569019|ref|ZP_06449246.1| PPE family protein [Mycobacteriu... 337 2e-90 gi|240173194|ref|ZP_04751852.1| PPE family protein, PPE15_1 [Myc... 336 4e-90 gi|167968597|ref|ZP_02550874.1| PPE family protein [Mycobacteriu... 335 8e-90 gi|254551827|ref|ZP_05142274.1| PPE family protein [Mycobacteriu... 332 9e-89 gi|31793945|ref|NP_856438.1| PPE family protein [Mycobacterium b... 274 1e-71 gi|340627772|ref|YP_004746224.1| PPE family protein [Mycobacteri... 274 2e-71 gi|13377911|gb|AAK20895.1| Rv2770c-like protein [Mycobacterium m... 274 2e-71 gi|289746573|ref|ZP_06505951.1| PPE family protein [Mycobacteriu... 273 3e-71 gi|57117024|ref|YP_177677.1| PPE family protein [Mycobacterium t... 273 3e-71 gi|15842308|ref|NP_337345.1| PPE family protein [Mycobacterium t... 272 6e-71 gi|289444315|ref|ZP_06434059.1| PPE family protein [Mycobacteriu... 271 1e-70 gi|308374682|ref|ZP_07436980.2| LOW QUALITY PROTEIN: PPE family ... 263 3e-68 gi|183981960|ref|YP_001850251.1| PPE family protein, PPE44 [Myco... 258 9e-67 gi|336461476|gb|EGO40346.1| PPE-repeat containing protein [Mycob... 253 6e-65 gi|254774062|ref|ZP_05215578.1| hypothetical protein MaviaA2_052... 253 6e-65 gi|41407101|ref|NP_959937.1| hypothetical protein MAP1003c [Myco... 251 1e-64 gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [My... 245 8e-63 gi|118617719|ref|YP_906051.1| PPE family protein [Mycobacterium ... 245 1e-62 gi|294994137|ref|ZP_06799828.1| PPE family protein [Mycobacteriu... 245 1e-62 gi|118464457|ref|YP_880591.1| PPE family protein [Mycobacterium ... 244 2e-62 gi|167968599|ref|ZP_02550876.1| PPE family protein [Mycobacteriu... 243 3e-62 gi|212595937|gb|ACJ35536.1| PPE10 [Mycobacterium avium subsp. av... 243 6e-62 gi|240170332|ref|ZP_04748991.1| PPE family protein, PPE15 [Mycob... 242 9e-62 gi|306777051|ref|ZP_07415388.1| PPE family protein [Mycobacteriu... 242 1e-61 gi|41408673|ref|NP_961509.1| hypothetical protein MAP2575c [Myco... 241 1e-61 gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacteriu... 232 1e-58 gi|333989641|ref|YP_004522255.1| PPE family protein PPE31_1 [Myc... 231 2e-58 gi|183982689|ref|YP_001850980.1| PPE family protein [Mycobacteri... 229 5e-58 gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycob... 225 8e-57 gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium b... 224 1e-56 >gi|15840468|ref|NP_335505.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|31792231|ref|NP_854724.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|57116813|ref|YP_177778.1| PPE family protein [Mycobacterium tuberculosis H37Rv] 50 more sequence titles Length=391 Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/391 (100%), Positives = 391/391 (100%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|289753101|ref|ZP_06512479.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289693688|gb|EFD61117.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=391 Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 391/391 (100%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 +QSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 SQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|339631101|ref|YP_004722743.1| PPE family protein [Mycobacterium africanum GM041182] gi|339330457|emb|CCC26122.1| PPE family protein [Mycobacterium africanum GM041182] Length=391 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFG LPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGTLPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|253799929|ref|YP_003032930.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289555178|ref|ZP_06444388.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|297633568|ref|ZP_06951348.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|253321432|gb|ACT26035.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289439810|gb|EFD22303.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|328459673|gb|AEB05096.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=391 Score = 733 bits (1891), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMV AAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVTAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|121636969|ref|YP_977192.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224989441|ref|YP_002644128.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|121492616|emb|CAL71084.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224772554|dbj|BAH25360.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|341600985|emb|CCC63656.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ] Length=391 Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTT PGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTKPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|340626050|ref|YP_004744502.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340004240|emb|CCC43381.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=391 Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/391 (99%), Positives = 390/391 (99%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAK TGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKSTGAYAGPRYGFKPTVMPKQVVV 391 >gi|344218866|gb|AEM99496.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=391 Score = 729 bits (1883), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/391 (99%), Positives = 389/391 (99%), Gaps = 0/391 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMV AAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVTAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT Sbjct 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVANIINSA NTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA Sbjct 241 PFVANIINSADNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM Sbjct 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV Sbjct 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 >gi|254550024|ref|ZP_05140471.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|289744777|ref|ZP_06504155.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|294995228|ref|ZP_06800919.1| PPE family protein [Mycobacterium tuberculosis 210] gi|298524536|ref|ZP_07011945.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] gi|289685305|gb|EFD52793.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|298494330|gb|EFI29624.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A] Length=377 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 377/377 (100%), Positives = 377/377 (100%), Gaps = 0/377 (0%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA Sbjct 1 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM Sbjct 61 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA Sbjct 121 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA Sbjct 181 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 240 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 314 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE Sbjct 241 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 300 Query 315 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA 374 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA Sbjct 301 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA 360 Query 375 GPRYGFKPTVMPKQVVV 391 GPRYGFKPTVMPKQVVV Sbjct 361 GPRYGFKPTVMPKQVVV 377 >gi|297730553|ref|ZP_06959671.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313657882|ref|ZP_07814762.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=377 Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/377 (99%), Positives = 376/377 (99%), Gaps = 0/377 (0%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMV AAQPYLA Sbjct 1 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVTAAQPYLA 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM Sbjct 61 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA Sbjct 121 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA Sbjct 181 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 240 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 314 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE Sbjct 241 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 300 Query 315 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA 374 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA Sbjct 301 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYA 360 Query 375 GPRYGFKPTVMPKQVVV 391 GPRYGFKPTVMPKQVVV Sbjct 361 GPRYGFKPTVMPKQVVV 377 >gi|118619703|ref|YP_908035.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118571813|gb|ABL06564.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=390 Score = 444 bits (1141), Expect = 2e-122, Method: Compositional matrix adjust. Identities = 302/393 (77%), Positives = 330/393 (84%), Gaps = 5/393 (1%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAA AAWNGLA ELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAASAAWNGLAVELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAM+AAAQPYLAWLTYT+EAA HAG+QA ASAAAYEAA+AMTVPP VVAANR+LLAAL Sbjct 61 ASMAMIAAAQPYLAWLTYTSEAAMHAGAQAAASAAAYEAAFAMTVPPPVVAANRSLLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LGINTPAIMATEALYAEMWAQDA AMYGYAAAS +G LQPLS P QTTNPGGLA Sbjct 121 VATNFLGINTPAIMATEALYAEMWAQDAGAMYGYAAASSTSGSLQPLSTPQQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAV AAA+AA L+S+LPN + GLASP+TS +D+TGL GII DI+ L Sbjct 181 AQSAAVSQAAASAAATD-GTTSLLSNLPNTIMGLASPITSAIDATGLGGIIQDIEDFLGI 239 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PFVAN+IN AVNTAAWY A IPTAIFLANALN+GAPV IA A A+AA AGLA Sbjct 240 PFVANVINGAVNTAAWYTTATIPTAIFLANALNTGAPV-IAAEGAIEAAEGAAAATAGLA 298 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 ++VTP G+GA+LGEATLVG+L+VP +WS A P T A AL GSGWTV EEA PV+G+ Sbjct 299 NTVTPTGVGAALGEATLVGKLAVPTSWSNALPKTAATTGALGGSGWTV-PEEAAPVSGVA 357 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 +PGMA+AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 358 GVPGMAAAAKGAGAYAGPRYGFKPIVMPKQVVV 390 >gi|183984423|ref|YP_001852714.1| PPE family protein, PPE15 [Mycobacterium marinum M] gi|183177749|gb|ACC42859.1| PPE family protein, PPE15 [Mycobacterium marinum M] Length=390 Score = 437 bits (1124), Expect = 2e-120, Method: Compositional matrix adjust. Identities = 298/393 (76%), Positives = 330/393 (84%), Gaps = 5/393 (1%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAA AAWNGLA ELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAASAAWNGLAVELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAM+AAAQPYLAWLTYT+EAA HAG+QA ASAAAYEAA+AMTVPP VVAANR+LLAAL Sbjct 61 ASMAMIAAAQPYLAWLTYTSEAAMHAGAQAAASAAAYEAAFAMTVPPPVVAANRSLLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LGINTPAIMATEALYAEMWAQDA AMYGYAAAS +G LQPLS P QTTNPGGLA Sbjct 121 VATNFLGINTPAIMATEALYAEMWAQDAGAMYGYAAASSTSGSLQPLSTPQQTTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAV AAA+AA + L+S+LPN + GLASP+TS +D+TGL GII DI+ L Sbjct 181 AQSAAVSQAAASAAATD-GITSLLSNLPNTIMGLASPITSAIDATGLGGIIQDIEDFLGI 239 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FVAN+IN VNTAAWY A IPTAIFLANAL++GAPV +A A A+AA AGLA Sbjct 240 GFVANVINGGVNTAAWYTTATIPTAIFLANALDTGAPV-VAAEGAIEAAEGAAAATAGLA 298 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 ++VTP G+GA+LGEATLVG+L+VP +WS+A P T A AL GSGWTV EEA PV+G+ Sbjct 299 NTVTPTGVGAALGEATLVGKLAVPTSWSSALPETAATTGALGGSGWTV-PEEAAPVSGVA 357 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 +PGMA+AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 358 GVPGMAAAAKGAGAYAGPRYGFKPIVMPKQVVV 390 >gi|15842306|ref|NP_337343.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|13882601|gb|AAK47157.1| PPE family protein [Mycobacterium tuberculosis CDC1551] Length=462 Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 274/398 (69%), Positives = 303/398 (77%), Gaps = 11/398 (2%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 69 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 128 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 129 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 188 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 189 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 248 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 249 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 308 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 309 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 365 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 366 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 424 Query 356 VTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V M M G++ AAK GAYAGPRYGFKP VMPKQVVV Sbjct 425 VAAMPGMAGISGAAKXXGAYAGPRYGFKPIVMPKQVVV 462 >gi|254232866|ref|ZP_04926193.1| PPE family protein [Mycobacterium tuberculosis C] gi|289754874|ref|ZP_06514252.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|124601925|gb|EAY60935.1| PPE family protein [Mycobacterium tuberculosis C] gi|289695461|gb|EFD62890.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|323718615|gb|EGB27779.1| PPE family protein [Mycobacterium tuberculosis CDC1551A] Length=462 Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 276/399 (70%), Positives = 304/399 (77%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 69 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 128 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 129 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 188 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 189 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 248 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 249 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 308 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 309 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 365 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 366 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 424 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 425 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 462 >gi|340627770|ref|YP_004746222.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005960|emb|CCC45127.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=394 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 275/399 (69%), Positives = 303/399 (76%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AA A +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAARAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 297 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 357 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|57117022|ref|YP_177906.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662610|ref|YP_001284133.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|254365419|ref|ZP_04981464.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem] 23 more sequence titles Length=394 Score = 364 bits (935), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 276/399 (70%), Positives = 304/399 (77%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 297 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 357 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|344220596|gb|AEN01227.1| PPE family protein [Mycobacterium tuberculosis CTRI-2] Length=394 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 275/399 (69%), Positives = 302/399 (76%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAALEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 297 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGS W V EEAGP Sbjct 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAV-PEEAGP 356 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 357 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|183981963|ref|YP_001850254.1| PPE family protein, PPE15_1 [Mycobacterium marinum M] gi|183175289|gb|ACC40399.1| PPE family protein, PPE15_1 [Mycobacterium marinum M] Length=393 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 260/398 (66%), Positives = 305/398 (77%), Gaps = 12/398 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA PMMAA AAWN LA ELGTTAAS+ESV+T+LTTE WMGP Sbjct 1 MDFGALPPEINSTRMYAGAGATPMMAAAAAWNRLAVELGTTAASFESVVTQLTTEQWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS +M A QPYLAWLTYTAE+AAHAG+QA ASAAA+EAA+A TVPP VAANRA LA L Sbjct 61 ASTSMAVAVQPYLAWLTYTAESAAHAGAQATASAAAFEAAFAATVPPAAVAANRAQLAML 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 V+TN+LG NTPAI ATEA Y EMWAQDALAMYGYAA+S AAG L PL+ P+Q NP GLA Sbjct 121 VSTNILGQNTPAIAATEAQYGEMWAQDALAMYGYAASSAAAGTLNPLTTPAQIANPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 +Q+AAV AAA V QV + +LI+++P AV GLASP S++D+TGLS ++ DI ++L T Sbjct 181 SQAAAVSQAAAATTVEQVGLGNLITNVPGAVMGLASPAASLVDATGLSTLVQDISSVLGT 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 PF+ N IN AVNTAAW+V AAIP ++FL + LN+ + A + A A A AAGL Sbjct 241 PFLQNAINGAVNTAAWFVMAAIPNSVFLGHTLNA---IETAGAPVAADLAPALAPAAGLR 297 Query 301 DSVTP-----AGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +V P AG+ A LG+A VG+LSVP WS+AAPA T+G TAL+GSGW V EE+GP Sbjct 298 HAVAPLSFGGAGVEAGLGQAAGVGKLSVPVGWSSAAPALTSGTTALDGSGWAV-PEESGP 356 Query 356 VTGMM--PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 + M PGMA A KG G +AGPRYGFKPTVMPKQVVV Sbjct 357 IAAMPGGPGMAVAGKG-GGFAGPRYGFKPTVMPKQVVV 393 >gi|289553446|ref|ZP_06442656.1| PPE family protein [Mycobacterium tuberculosis KZN 605] gi|289438078|gb|EFD20571.1| PPE family protein [Mycobacterium tuberculosis KZN 605] Length=411 Score = 362 bits (929), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 275/399 (69%), Positives = 303/399 (76%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 18 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 77 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 78 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 137 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 138 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 197 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 198 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 257 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 258 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 314 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGS W V EEAGP Sbjct 315 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAV-PEEAGP 373 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 374 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 411 >gi|31793943|ref|NP_856436.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638647|ref|YP_978871.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991139|ref|YP_002645828.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 8 more sequence titles Length=394 Score = 361 bits (927), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 275/399 (69%), Positives = 303/399 (76%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A I A+FL +A + P + A AA+A A Sbjct 241 TFVQNAINGAVNTTAWFVMATIRNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 297 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGP Sbjct 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGP 356 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 357 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|148823956|ref|YP_001288710.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253798149|ref|YP_003031150.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289762940|ref|ZP_06522318.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|148722483|gb|ABR07108.1| PPE family protein [Mycobacterium tuberculosis F11] gi|253319652|gb|ACT24255.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|289710446|gb|EFD74462.1| PPE family protein [Mycobacterium tuberculosis GM 1503] gi|328457922|gb|AEB03345.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] Length=394 Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 275/399 (69%), Positives = 303/399 (76%), Gaps = 13/399 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINS RMYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GP Sbjct 1 MDFGALPPEINSTRMYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+MV AAQPYLAWLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAAL Sbjct 61 ASMSMVVAAQPYLAWLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNVLG NTPAIMATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Sbjct 121 VATNVLGQNTPAIMATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA + V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL Sbjct 181 GQAAAVSHAAAASTVQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGI 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV N IN AVNT AW+V A IP A+FL +A + P + A AA+A A Sbjct 241 TFVQNAINGAVNTTAWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---A 297 Query 301 DSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGP 355 +VTP G+G ASLGEA+ VG LSVPA WSTAAPA T+G TALEGS W V EEAGP Sbjct 298 HTVTPVGVGGASLTASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAV-PEEAGP 356 Query 356 VTGMMPGM---ASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 V MPGM + AAKG GAYAGPRYGFKP VMPKQVVV Sbjct 357 VAA-MPGMAGISGAAKGAGAYAGPRYGFKPIVMPKQVVV 394 >gi|289569019|ref|ZP_06449246.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289542773|gb|EFD46421.1| PPE family protein [Mycobacterium tuberculosis T17] Length=198 Score = 337 bits (865), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 177/177 (100%), Positives = 177/177 (100%), Gaps = 0/177 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP Sbjct 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL Sbjct 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPG 177 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPG Sbjct 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPG 177 >gi|240173194|ref|ZP_04751852.1| PPE family protein, PPE15_1 [Mycobacterium kansasii ATCC 12478] Length=384 Score = 336 bits (862), Expect = 4e-90, Method: Compositional matrix adjust. Identities = 270/394 (69%), Positives = 304/394 (78%), Gaps = 13/394 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMYAGAGA PMMAA AAW+ LA EL TTAAS ESVIT+LTTE W+GP Sbjct 1 MDFGALPPEINSARMYAGAGAAPMMAAAAAWHRLAVELSTTAASVESVITQLTTEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ASM+M AAAQPYLAWLTYTAE+AAHAGSQA ASAAA+EAA+A TVPP VAANRALLAAL Sbjct 61 ASMSMAAAAQPYLAWLTYTAESAAHAGSQATASAAAFEAAFAATVPPAEVAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN+LG NTPAI ATEA Y EMWAQDALAMYGYAA+S AAG L PL+ PS+ NP GLA Sbjct 121 VATNILGQNTPAIAATEAHYGEMWAQDALAMYGYAASSAAAGTLNPLTTPSRIANPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQ+AAVG AAAT QV +A+LI+++PN V GLASP SV D+T L GI ID LL Sbjct 181 AQAAAVGQAAATGTAQQVGLANLITNVPNTVMGLASPAASVFDATALGGI---IDDLLGN 237 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALN-SGAPVAIAEGAIEAAEGAASAAAAGL 299 FV N IN AVNTAAW+V A IP A+FL +AL+ G A I A +AAA Sbjct 238 TFVQNAINGAVNTAAWFVMATIPNAVFLGHALDVEGLSAAQLVPTIAGAAATTNAAAPAG 297 Query 300 ADSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM 359 A SV A +G+A+ VG+L+VPA+WS+AAPA +G TALEGSGW V EEAGPVT M Sbjct 298 AGSVL-----AGMGQASAVGKLAVPASWSSAAPALPSGTTALEGSGWAV-PEEAGPVTAM 351 Query 360 M--PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 PGMA+A+KG G YAGPRYGF+PTVMPKQVVV Sbjct 352 PGGPGMAAASKG-GGYAGPRYGFRPTVMPKQVVV 384 >gi|167968597|ref|ZP_02550874.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|294994139|ref|ZP_06799830.1| PPE family protein [Mycobacterium tuberculosis 210] gi|306777049|ref|ZP_07415386.1| PPE family protein [Mycobacterium tuberculosis SUMu001] 19 more sequence titles Length=380 Score = 335 bits (859), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 263/385 (69%), Positives = 291/385 (76%), Gaps = 13/385 (3%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GPASM+MV AAQPYLA Sbjct 1 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAALVATNVLG NTPAIM Sbjct 61 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Q+AAV AAA + Sbjct 121 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL FV N IN AVNT Sbjct 181 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 240 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLG----- 309 AW+V A IP A+FL +A + P + A AA+A A +VTP G+G Sbjct 241 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---AHTVTPVGVGGASLT 297 Query 310 ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGM---ASA 366 ASLGEA+ VG LSVPA WSTAAPA T+G TALEGSGW V EEAGPV MPGM + A Sbjct 298 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSGWAV-PEEAGPVAA-MPGMAGISGA 355 Query 367 AKGTGAYAGPRYGFKPTVMPKQVVV 391 AKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 AKGAGAYAGPRYGFKPIVMPKQVVV 380 >gi|254551827|ref|ZP_05142274.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297635377|ref|ZP_06953157.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] gi|297732375|ref|ZP_06961493.1| PPE family protein [Mycobacterium tuberculosis KZN R506] gi|313659707|ref|ZP_07816587.1| PPE family protein [Mycobacterium tuberculosis KZN V2475] Length=380 Score = 332 bits (850), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 262/385 (69%), Positives = 290/385 (76%), Gaps = 13/385 (3%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MYAGAGA P+MAAGA WNGLA EL TTA+S ESVI +LTTE W+GPASM+MV AAQPYLA Sbjct 1 MYAGAGAAPLMAAGATWNGLAVELSTTASSVESVIMQLTTEQWLGPASMSMVVAAQPYLA 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLTYTAE+AAHA +QAMASAAA+EAA+AMTVPP VAANRALLAALVATNVLG NTPAIM Sbjct 61 WLTYTAESAAHAAAQAMASAAAFEAAFAMTVPPAEVAANRALLAALVATNVLGQNTPAIM 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEA Y EMWAQDALAMYGYAA+S AAG L PL PSQT N GLA Q+AAV AAA + Sbjct 121 ATEAHYGEMWAQDALAMYGYAASSAAAGRLNPLITPSQTANMAGLAGQAAAVSHAAAAST 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 V QV + LIS+LPNAV G ASP+TS D+ GL GII DI+ LL FV N IN AVNT Sbjct 181 VQQVGLGSLISNLPNAVMGFASPLTSAADAAGLGGIIQDIEELLGITFVQNAINGAVNTT 240 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLG----- 309 AW+V A IP A+FL +A + P + A AA+A A +VTP G+G Sbjct 241 AWFVMATIPNAVFLGHAFAALNPATVTAAADAVPAAAAAAGL---AHTVTPVGVGGASLT 297 Query 310 ASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGM---ASA 366 ASLGEA+ VG LSVPA WSTAAPA T+G TALEGS W V EEAGPV MPGM + A Sbjct 298 ASLGEASSVGGLSVPAGWSTAAPAMTSGTTALEGSVWAV-PEEAGPVAA-MPGMAGISGA 355 Query 367 AKGTGAYAGPRYGFKPTVMPKQVVV 391 AKG GAYAGPRYGFKP VMPKQVVV Sbjct 356 AKGAGAYAGPRYGFKPIVMPKQVVV 380 >gi|31793945|ref|NP_856438.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|121638649|ref|YP_978873.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|224991141|ref|YP_002645830.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] 15 more sequence titles Length=382 Score = 274 bits (701), Expect = 1e-71, Method: Compositional matrix adjust. Identities = 214/390 (55%), Positives = 254/390 (66%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A+ QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 237 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 238 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 295 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 296 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 349 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 350 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|340627772|ref|YP_004746224.1| PPE family protein [Mycobacterium canettii CIPT 140010059] gi|340005962|emb|CCC45129.1| PPE family protein [Mycobacterium canettii CIPT 140010059] Length=382 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 214/390 (55%), Positives = 254/390 (66%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A+ QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVMSFASPVMSAAD-TGLEAVRQFLN--LDV 237 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 238 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVDGAAPGGGAPAAVAHAVAPAGVG-- 295 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 296 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 349 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 350 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|13377911|gb|AAK20895.1| Rv2770c-like protein [Mycobacterium microti] gi|13936234|gb|AAK40252.1| 2770c [Mycobacterium microti] Length=397 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 213/390 (55%), Positives = 254/390 (66%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 16 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 75 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 76 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 135 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 136 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 195 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A+ QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 196 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 252 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 253 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 310 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 311 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 364 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 365 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 394 >gi|289746573|ref|ZP_06505951.1| PPE family protein [Mycobacterium tuberculosis 02_1987] gi|289687101|gb|EFD54589.1| PPE family protein [Mycobacterium tuberculosis 02_1987] Length=402 Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 213/390 (55%), Positives = 254/390 (66%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 21 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 80 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 81 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 140 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 141 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 200 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A+ QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 201 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 257 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 258 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 315 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 316 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 369 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 370 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 399 >gi|57117024|ref|YP_177677.1| PPE family protein [Mycobacterium tuberculosis H37Rv] gi|148662612|ref|YP_001284135.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|148823958|ref|YP_001288712.1| PPE family protein [Mycobacterium tuberculosis F11] 8 more sequence titles Length=382 Score = 273 bits (698), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 214/390 (55%), Positives = 253/390 (65%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 181 HQAAAVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 237 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 238 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 295 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 296 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 349 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 350 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|15842308|ref|NP_337345.1| PPE family protein [Mycobacterium tuberculosis CDC1551] gi|253798147|ref|YP_003031148.1| PPE family protein [Mycobacterium tuberculosis KZN 1435] gi|254232868|ref|ZP_04926195.1| PPE family protein [Mycobacterium tuberculosis C] 10 more sequence titles Length=402 Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 213/390 (55%), Positives = 253/390 (65%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGP Sbjct 21 VDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGP 80 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 81 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 140 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 141 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 200 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 201 HQAAAVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 257 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 258 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 315 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 316 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 369 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 370 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 399 >gi|289444315|ref|ZP_06434059.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289570949|ref|ZP_06451176.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289751427|ref|ZP_06510805.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289754876|ref|ZP_06514254.1| PPE family protein [Mycobacterium tuberculosis EAS054] gi|289417234|gb|EFD14474.1| PPE family protein [Mycobacterium tuberculosis T46] gi|289544703|gb|EFD48351.1| PPE family protein [Mycobacterium tuberculosis T17] gi|289692014|gb|EFD59443.1| PPE family protein [Mycobacterium tuberculosis T92] gi|289695463|gb|EFD62892.1| PPE family protein [Mycobacterium tuberculosis EAS054] Length=382 Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 213/390 (55%), Positives = 253/390 (65%), Gaps = 13/390 (3%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WM P Sbjct 1 MDFGALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMVP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L Sbjct 61 ASLSMAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAEL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 ATN+LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Sbjct 121 TATNILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAVG A A+A+ QV ++ LIS + +AV ASPV S D TGL + ++ L Sbjct 181 HQAAAVGQAGASASARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDV 237 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 P + A + AAI LA+A+ + A GA A A + A G Sbjct 238 PLFVESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG-- 295 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM- 359 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M Sbjct 296 ----GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMP 349 Query 360 -MPGMASAAKGTGAYAGPRYGFKPTVMPKQ 388 PGM AA GA +GPRYG KP VMPK Sbjct 350 PAPGMVVAANSVGADSGPRYGVKPIVMPKH 379 >gi|308374682|ref|ZP_07436980.2| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis SUMu006] gi|308341059|gb|EFP29910.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis SUMu006] Length=378 Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 210/386 (55%), Positives = 249/386 (65%), Gaps = 13/386 (3%) Query 5 ALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMA 64 ALPPE+NSARMY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGPAS++ Sbjct 1 ALPPEVNSARMYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLS 60 Query 65 MVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATN 124 M AA QPYL WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L ATN Sbjct 61 MAAAVQPYLVWLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATN 120 Query 125 VLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSA 184 +LG N AI ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Q+A Sbjct 121 ILGQNVSAIAATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAA 180 Query 185 AVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVA 244 AVG A A+A QV ++ LIS + +AV ASPV S D TGL + ++ L P Sbjct 181 AVGQAGASAFARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDVPLFV 237 Query 245 NIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVT 304 + A + AAI LA+A+ + A GA A A + A G Sbjct 238 ESAFHGLGGVADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG------ 291 Query 305 PAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPG 362 L A LG A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M PG Sbjct 292 GTALTADLGNASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMPPAPG 349 Query 363 MASAAKGTGAYAGPRYGFKPTVMPKQ 388 M AA GA +GPRYG KP VMPK Sbjct 350 MVVAANSVGADSGPRYGVKPIVMPKH 375 >gi|183981960|ref|YP_001850251.1| PPE family protein, PPE44 [Mycobacterium marinum M] gi|183175286|gb|ACC40396.1| PPE family protein, PPE44 [Mycobacterium marinum M] Length=377 Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust. Identities = 205/391 (53%), Positives = 258/391 (66%), Gaps = 18/391 (4%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DFGALPPEINSARMY GAGA P++ A AAWN +A EL T A++ ESVITRL+++ W+G Sbjct 5 VDFGALPPEINSARMYFGAGAAPLLGAAAAWNDIAVELSTAASAIESVITRLSSDQWLGT 64 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AAAQP LAWL+YTAE++A A +QA AS AA+E A+AMTVPP VAANRA LA L Sbjct 65 ASLSMAAAAQPLLAWLSYTAESSALAAAQAAASVAAFETAFAMTVPPAEVAANRARLAEL 124 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +ATN+ G N PAI ATEA Y EMWAQDA AMYGYAA+ A L PL+ PS+TTNPGG+A Sbjct 125 MATNIFGQNVPAIAATEARYGEMWAQDASAMYGYAASCAGAVRLNPLTRPSETTNPGGIA 184 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 Q+AAV AAA+ +V Q +LIS++ +AV L++PVTS T L I DI L Sbjct 185 RQAAAVSHAAASVSVQQAGFENLISTVSDAVMSLSAPVTSSPHVTSLGAFIEDIIFLDIP 244 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV + + TA + A + A L L + A A + A+AA + LA Sbjct 245 RFVESAFHGLGATADY---ATMIAANLL--TLQTSANTATS----AGGVAPAAAAGSALA 295 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 +VT AG +G+A+ VG LSVP W+TAAPA T GA + +G+GW V E+ GM+ Sbjct 296 QTVTSAG----VGDASSVGALSVPVGWTTAAPAATGGAAS-DGTGWAVPDEDVPSPAGMV 350 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 G G GA GPRYG KP VMPK+V+V Sbjct 351 AG----TNGAGARPGPRYGVKPRVMPKKVLV 377 >gi|336461476|gb|EGO40346.1| PPE-repeat containing protein [Mycobacterium avium subsp. paratuberculosis S397] Length=690 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 205/398 (52%), Positives = 257/398 (65%), Gaps = 25/398 (6%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DF A+PPEI SA MYAGAG+GP+MAA A+ L+AE+ +TA+ +ES+I+ LTTE W G Sbjct 311 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 370 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 S A AAAQP +++LT TA A A +QA ASAAAYEAA+A TVPP V+AANR+LLA L Sbjct 371 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 430 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LG+N+ AI ATEA YAEMW QDA M Y AAS AAG+LQP++P + TTNPG A Sbjct 431 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTNPGAAA 490 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 A + AT + Q + DL +S++ S G++ ID LL T Sbjct 491 AVDNGAVAFDATNSTAQTAGLDL---------------SSLITSPPTDGLLQSIDDLLGT 535 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNS--GAPVAIAEGAIEAAEGAASAAAAG 298 P N N A+NTAAW+V A IP A+ L L + P ++ + AA A + Sbjct 536 PSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTVPAIPFSLTDSVAPAAGAAITPGM-- 593 Query 299 LADSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATA--LEGSGWTVAAEEAGPV 356 + SVT AG A++GEA+ VG LSVPA+WS AAPAT+ ++A LEGSGWTVA+ EA PV Sbjct 594 MVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSGWTVAS-EAEPV 652 Query 357 TGMMPGMASAAKGTGAY---AGPRYGFKPTVMPKQVVV 391 T M +AA GA +GPRYGFKP VMPKQVVV Sbjct 653 TAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 690 >gi|254774062|ref|ZP_05215578.1| hypothetical protein MaviaA2_05233 [Mycobacterium avium subsp. avium ATCC 25291] gi|212595906|gb|ACJ35532.1| PPE6 [Mycobacterium avium subsp. avium] gi|212595970|gb|ACJ35540.1| PPE15 [Mycobacterium avium subsp. avium] Length=382 Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust. Identities = 205/398 (52%), Positives = 257/398 (65%), Gaps = 25/398 (6%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DF A+PPEI SA MYAGAG+GP+MAA A+ L+AE+ +TA+ +ES+I+ LTTE W G Sbjct 3 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 62 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 S A AAAQP +++LT TA A A +QA ASAAAYEAA+A TVPP V+AANR+LLA L Sbjct 63 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 122 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LG+N+ AI ATEA YAEMW QDA M Y AAS AAG+LQP++P + TTNPG A Sbjct 123 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTNPGAAA 182 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 A + AT + Q + DL +S++ S G++ ID LL T Sbjct 183 AVDNGAVAFDATNSTAQTAGLDL---------------SSLITSPPTDGLLQSIDDLLGT 227 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNS--GAPVAIAEGAIEAAEGAASAAAAG 298 P N N A+NTAAW+V A IP A+ L L + P ++ + AA A + Sbjct 228 PSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTVPAIPFSLTDSVAPAAGAAITPGM-- 285 Query 299 LADSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATA--LEGSGWTVAAEEAGPV 356 + SVT AG A++GEA+ VG LSVPA+WS AAPAT+ ++A LEGSGWTVA+ EA PV Sbjct 286 MVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSGWTVAS-EAEPV 344 Query 357 TGMMPGMASAAKGTGAY---AGPRYGFKPTVMPKQVVV 391 T M +AA GA +GPRYGFKP VMPKQVVV Sbjct 345 TAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 382 >gi|41407101|ref|NP_959937.1| hypothetical protein MAP1003c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395452|gb|AAS03320.1| PE [Mycobacterium avium subsp. paratuberculosis K-10] Length=696 Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 205/398 (52%), Positives = 257/398 (65%), Gaps = 25/398 (6%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DF A+PPEI SA MYAGAG+GP+MAA A+ L+AE+ +TA+ +ES+I+ LTTE W G Sbjct 317 LDFAAVPPEITSALMYAGAGSGPLMAAATAYANLSAEVSSTASQWESIISLLTTEQWTGG 376 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 S A AAAQP +++LT TA A A +QA ASAAAYEAA+A TVPP V+AANR+LLA L Sbjct 377 GSAAAAAAAQPIVSYLTTTAAALEQASAQATASAAAYEAAFAATVPPPVIAANRSLLATL 436 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LG+N+ AI ATEA YAEMW QDA M Y AAS AAG+LQP++P + TTNPG A Sbjct 437 VATNFLGVNSAAIAATEAQYAEMWVQDATMMATYQAASAAAGVLQPVTPLTSTTNPGAAA 496 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 A + AT + Q + DL +S++ S G++ ID LL T Sbjct 497 AVDNGAVAFDATNSTAQTAGLDL---------------SSLITSPPTDGLLQSIDDLLGT 541 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNS--GAPVAIAEGAIEAAEGAASAAAAG 298 P N N A+NTAAW+V A IP A+ L L + P ++ + AA A + Sbjct 542 PSFLNATNGAINTAAWWVCATIPNAVSLGKTLGTVPAIPFSLTDSVAPAAGAAITPGM-- 599 Query 299 LADSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATA--LEGSGWTVAAEEAGPV 356 + SVT AG A++GEA+ VG LSVPA+WS AAPAT+ ++A LEGSGWTVA+ EA PV Sbjct 600 MVGSVTGAGASAAVGEASAVGGLSVPASWSAAAPATSLASSAAPLEGSGWTVAS-EAEPV 658 Query 357 TGMMPGMASAAKGTGAY---AGPRYGFKPTVMPKQVVV 391 T M +AA GA +GPRYGFKP VMPKQVVV Sbjct 659 TAMPGMPGAAAAAKGAGAYGSGPRYGFKPIVMPKQVVV 696 >gi|183982688|ref|YP_001850979.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] gi|183176014|gb|ACC41124.1| PPE family protein, PPE31_1 [Mycobacterium marinum M] Length=422 Score = 245 bits (626), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 191/417 (46%), Positives = 246/417 (59%), Gaps = 30/417 (7%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDF ALPPEINS RMY+G G+ PM+AA AW+GLAAEL +TAA+YE+VI LT + W+GP Sbjct 1 MDFAALPPEINSIRMYSGPGSAPMLAAVTAWDGLAAELRSTAAAYETVIAVLTGDGWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS +M AA PYLAW+ T A QA A+A A+EAA+AMTVPP VAANR L L Sbjct 61 ASESMEAAVFPYLAWMNITGMQAEQTARQAAAAAGAFEAAFAMTVPPAQVAANRTQLQTL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN+LG NTPAI ATEA Y EMWAQDA AMYGYA S AA L + P+QTT+P GLA Sbjct 121 VATNLLGQNTPAIAATEAAYGEMWAQDAAAMYGYAVGSAAASTLTQFTQPAQTTDPSGLA 180 Query 181 AQSAAVGSAAATAAVN--QVSVADLISSLPNAVSGLASP-VTSVLDSTGLSGIIA----D 233 +QSAAV A + N Q + L+S++P ++ GLASP S +D+ SG++A Sbjct 181 SQSAAVTQAVGSTVGNLTQTELPQLMSAVPASLQGLASPAAASPIDAIPGSGLLAALLNF 240 Query 234 IDALLATPFVANIINSAVN--TAAWYVN-AAIPTAIFLA----NALNSGA-------PVA 279 +D P+ + +S VN +A YV+ A + AI+ A NA+ GA P+ Sbjct 241 LDGNDGNPYGVFLNSSLVNGFVSAGYVSPAVVGPAIWAAMADINAVALGAQESAAVPPMG 300 Query 280 IAEGA---IEAAEGAASAAAAGLAD----SVTPAGLGASLGEATLVGRLSVPAAWSTAAP 332 EG I AA A+ + L + ++ G+ A + +A LVGR+SVP +W A Sbjct 301 SGEGNPSWIPAASPASPESLPVLGEETAATLGTGGISAGMNQAELVGRMSVPQSWGVATA 360 Query 333 ATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAAKGTGAYAGPRYGFKPTVMPK 387 A G GWT A GM +PGM + G PRYGF+PT+M + Sbjct 361 VANHAGAAAPGGGWTSTAVVPEAAVGMPGIPGMPAGIYGHNLGNAPRYGFRPTIMGR 417 >gi|118617719|ref|YP_906051.1| PPE family protein [Mycobacterium ulcerans Agy99] gi|118569829|gb|ABL04580.1| PPE family protein [Mycobacterium ulcerans Agy99] Length=373 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 206/391 (53%), Positives = 259/391 (67%), Gaps = 18/391 (4%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPEINSARMY GAGA P++ A AAWN +A EL T A++ ESVITRL+++ W+G Sbjct 1 MDFGALPPEINSARMYFGAGAAPLLGAAAAWNDIAVELSTAASAIESVITRLSSDQWLGT 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AAAQP LAWL+YTAE++A A +QA AS AA+E A+AMTVPP VAANRA LAAL Sbjct 61 ASLSMAAAAQPLLAWLSYTAESSALAAAQAAASVAAFETAFAMTVPPAEVAANRARLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +ATN+ G N PAI ATEA Y EMWAQDA AMYGYAA+ A L PL+ PS+TTNPGG+A Sbjct 121 MATNIFGQNVPAIAATEARYGEMWAQDASAMYGYAASCAGAVRLNPLTRPSETTNPGGIA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 +Q+ AV AAA+ +V Q +LIS++ +AV+ L+ PVTS T L I DI L Sbjct 181 SQAVAVSHAAASVSVQQAGFENLISTVSDAVTSLSGPVTSSPHVTSLGAFIEDIIFLDIP 240 Query 241 PFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLA 300 FV + + TA + A + A L L + A A + A+AA + LA Sbjct 241 RFVESAFHGLGATADY---ATMIAANLL--TLQTSANTATS----AGGVAPAAAAGSALA 291 Query 301 DSVTPAGLGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGMM 360 +VT AG +G+A+ VG LSVP W+TAAPA T GA + +G+GW V E+ GM+ Sbjct 292 QTVTSAG----VGDASSVGALSVPVGWTTAAPAATGGAAS-DGTGWAVPDEDVPSPAGMV 346 Query 361 PGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 G G GA GPRYG KP VMPK+V+V Sbjct 347 AG----TNGAGARPGPRYGVKPRVMPKKVLV 373 >gi|294994137|ref|ZP_06799828.1| PPE family protein [Mycobacterium tuberculosis 210] gi|339295620|gb|AEJ47731.1| Rv2770c-like protein [Mycobacterium tuberculosis CCDC5079] gi|339299237|gb|AEJ51347.1| Rv2770c-like protein [Mycobacterium tuberculosis CCDC5180] Length=368 Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 201/376 (54%), Positives = 240/376 (64%), Gaps = 13/376 (3%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGPAS++M AA QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLV 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L ATN+LG N AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Q+AAVG A A+A+ Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAS 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 QV ++ LIS + +AV ASPV S D TGL + ++ L P + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDVPLFVESAFHGLGGV 237 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 314 A + AAI LA+A+ + A GA A A + A G L A LG Sbjct 238 ADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG------GTALTADLGN 291 Query 315 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAAKGTGA 372 A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M PGM AA GA Sbjct 292 ASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMPPAPGMVVAANSVGA 349 Query 373 YAGPRYGFKPTVMPKQ 388 +GPRYG KP VMPK Sbjct 350 DSGPRYGVKPIVMPKH 365 >gi|118464457|ref|YP_880591.1| PPE family protein [Mycobacterium avium 104] gi|118165744|gb|ABK66641.1| ppe family protein [Mycobacterium avium 104] Length=383 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 205/403 (51%), Positives = 245/403 (61%), Gaps = 34/403 (8%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 DFGALPPE+NS RMY GAGA PMMAA AA++ LA EL TTAA+ +S I LT E WMGP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ++ AMV A QPY+ W+ TA A +QAMASAAAYE A+AMTVPP +VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +A+NVLG N AI ATEA Y EMWAQDA AMYGYAA+S AG L PL+ P+ T PGGL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 AQSAAVGSAAATAAVNQVS-VADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLA 239 AQ+AAV A AT+A Q S + ++++PN V LA+P D GLS +D LL Sbjct 183 AQAAAVSGATATSA--QTSGLQGTVANVPNVVRTLAAPA----DPPGLSA----LDNLLG 232 Query 240 TPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGL 299 P V N+ N+ N +W V I + I + L++ A A G GA A Sbjct 233 NPVVNNVGNAGFNVVSWNVFNTIVSNILYNHTLDT----AAAAGVAGEVGGAVGGGALVG 288 Query 300 ADSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAP---ATTAGATALEGSGWTVAAE 351 A + AG+G AS+G A VG LS PA WS P ATT GAT W AE Sbjct 289 AAAPATAGVGAAPVLASMGSAATVGELSTPATWSAPTPEPAATTVGATE-----WASPAE 343 Query 352 EAGPVTGM---MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 E P T MP +ASA +G G GPRYG KP VMP ++ V Sbjct 344 E--PHTAWATGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|167968599|ref|ZP_02550876.1| PPE family protein [Mycobacterium tuberculosis H37Ra] gi|254551829|ref|ZP_05142276.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|297635379|ref|ZP_06953159.1| PPE family protein [Mycobacterium tuberculosis KZN 4207] 14 more sequence titles Length=368 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 201/376 (54%), Positives = 239/376 (64%), Gaps = 13/376 (3%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGPAS++M AA QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAAAVQPYLV 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L ATN+LG N AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Q+AAVG A A+A Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAF 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 QV ++ LIS + +AV ASPV S D TGL + ++ L P + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDVPLFVESAFHGLGGV 237 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 314 A + AAI LA+A+ + A GA A A + A G L A LG Sbjct 238 ADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG------GTALTADLGN 291 Query 315 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAAKGTGA 372 A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M PGM AA GA Sbjct 292 ASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMPPAPGMVVAANSVGA 349 Query 373 YAGPRYGFKPTVMPKQ 388 +GPRYG KP VMPK Sbjct 350 DSGPRYGVKPIVMPKH 365 >gi|212595937|gb|ACJ35536.1| PPE10 [Mycobacterium avium subsp. avium] Length=383 Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust. Identities = 204/403 (51%), Positives = 245/403 (61%), Gaps = 34/403 (8%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 DFGALPPE+NS RMY GAGA PMMAA AA++ LA EL TTAA+ +S I LT E WMGP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ++ AMV A QPY+ W+ TA A +QAMASAAAYE A+AMTVPP +VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +A+NVLG N AI ATEA Y EMWAQDA AMYGYAA+S AG L PL+ P+ T PGGL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 AQSAAVGSAAATAAVNQVS-VADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLA 239 AQ+AAV A AT+A Q S + ++++PN V LA+P D GLS +D LL Sbjct 183 AQAAAVSGATATSA--QTSGLQGTVANVPNVVRTLAAPA----DPPGLSA----LDNLLG 232 Query 240 TPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGL 299 P V N+ N+ + +W V I + I + L++ A A G GA A Sbjct 233 NPVVNNVGNAGFDVVSWNVFNTIVSNILYNHTLDT----AAAAGVAGEVGGAVGGGALVG 288 Query 300 ADSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAP---ATTAGATALEGSGWTVAAE 351 A + AG+G AS+G A VG LS PA WS P ATT GAT W AE Sbjct 289 AAAPATAGVGAAPVLASMGSAATVGELSTPATWSAPTPEPAATTVGATE-----WASPAE 343 Query 352 EAGPVTGM---MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 E P T MP +ASA +G G GPRYG KP VMP ++ V Sbjct 344 E--PHTAWATGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|240170332|ref|ZP_04748991.1| PPE family protein, PPE15 [Mycobacterium kansasii ATCC 12478] Length=261 Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 192/261 (74%), Positives = 220/261 (85%), Gaps = 0/261 (0%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDF ALPPEINS RMYAGAGAGP++AA AAWNGLA EL TTAAS ES++T LT E W+GP Sbjct 1 MDFAALPPEINSGRMYAGAGAGPLLAAAAAWNGLALELNTTAASIESIVTLLTGEQWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AAAQPY+AWLTYT +A HAG+QAMASAAAYEAA+A TVPP ++AANRALLAAL Sbjct 61 ASLSMAAAAQPYIAWLTYTGASAEHAGAQAMASAAAYEAAFAATVPPPIIAANRALLAAL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LGINTPAIMATEA Y EMWAQDA+AMY YAA+S +G L PL+ PSQ+TNPGGLA Sbjct 121 VATNFLGINTPAIMATEAHYMEMWAQDAMAMYAYAASSANSGTLNPLTTPSQSTNPGGLA 180 Query 181 AQSAAVGSAAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLAT 240 AQSAAVG AAA A VNQV ++ LI+ LPNAV LASP+TSV D+TGL+GI+ ID LLA Sbjct 181 AQSAAVGQAAAAATVNQVGLSSLITDLPNAVMSLASPITSVADATGLTGIMQSIDDLLAI 240 Query 241 PFVANIINSAVNTAAWYVNAA 261 P VANI+N +NTAAW+V AA Sbjct 241 PMVANILNGGINTAAWFVMAA 261 >gi|306777051|ref|ZP_07415388.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|306973166|ref|ZP_07485827.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|307080875|ref|ZP_07490045.1| PPE family protein [Mycobacterium tuberculosis SUMu011] gi|308214561|gb|EFO73960.1| PPE family protein [Mycobacterium tuberculosis SUMu001] gi|308357429|gb|EFP46280.1| PPE family protein [Mycobacterium tuberculosis SUMu010] gi|308361380|gb|EFP50231.1| PPE family protein [Mycobacterium tuberculosis SUMu011] Length=368 Score = 242 bits (617), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 200/376 (54%), Positives = 238/376 (64%), Gaps = 13/376 (3%) Query 15 MYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPYLA 74 MY GAGA ++AA AAWNG+A E+ T A+S SVITRL+TE WMGPAS++M A QPYL Sbjct 1 MYGGAGAADLLAAAAAWNGIAVEVSTAASSVGSVITRLSTEHWMGPASLSMAATVQPYLV 60 Query 75 WLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAALVATNVLGINTPAIM 134 WLT TAE++A A +QAMASAAA+E A+A+TVPP V ANRALLA L ATN+LG N AI Sbjct 61 WLTCTAESSALAAAQAMASAAAFETAFALTVPPAEVVANRALLAELTATNILGQNVSAIA 120 Query 135 ATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVGSAAATAA 194 ATEA Y EMWAQDA AMYGYAAAS A L PL+ PS TNP GLA Q+AAVG A A+A Sbjct 121 ATEARYGEMWAQDASAMYGYAAASAVAARLNPLTRPSHITNPAGLAHQAAAVGQAGASAF 180 Query 195 VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLATPFVANIINSAVNTA 254 QV ++ LIS + +AV ASPV S D TGL + ++ L P + Sbjct 181 ARQVGLSHLISDVADAVLSFASPVMSAAD-TGLEAVRQFLN--LDVPLFVESAFHGLGGV 237 Query 255 AWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGE 314 A + AAI LA+A+ + A GA A A + A G L A LG Sbjct 238 ADFATAAIGNMTLLADAMGTVGGAAPGGGAAAAVAHAVAPAGVG------GTALTADLGN 291 Query 315 ATLVGRLSVPAAWSTAAPATTAGATALEGSGWTVAAEEAGPVTGM--MPGMASAAKGTGA 372 A++VGRLSVPA+WSTAA TA AL+G+GW V EE GP+ M PGM AA GA Sbjct 292 ASVVGRLSVPASWSTAA-PATAAGAALDGTGWAV-PEEDGPIAVMPPAPGMVVAANSVGA 349 Query 373 YAGPRYGFKPTVMPKQ 388 +GPRYG KP VMPK Sbjct 350 DSGPRYGVKPIVMPKH 365 >gi|41408673|ref|NP_961509.1| hypothetical protein MAP2575c [Mycobacterium avium subsp. paratuberculosis K-10] gi|41397031|gb|AAS04892.1| hypothetical protein MAP_2575c [Mycobacterium avium subsp. paratuberculosis K-10] gi|336458621|gb|EGO37586.1| PPE family protein [Mycobacterium avium subsp. paratuberculosis S397] Length=383 Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 203/403 (51%), Positives = 245/403 (61%), Gaps = 34/403 (8%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 DFGALPPE+NS RMY GAGA PMMAA AA++ LA EL TTAA+ +S I LT E WMGP Sbjct 3 FDFGALPPEVNSTRMYTGAGAAPMMAAAAAFSNLADELSTTAAATQSAIANLTGEEWMGP 62 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 ++ AMV A QPY+ W+ TA A +QAMASAAAYE A+AMTVPP +VAANRA LAAL Sbjct 63 SAAAMVTAVQPYVQWMHTTAGQLQQAAAQAMASAAAYETAFAMTVPPALVAANRAQLAAL 122 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +A+NVLG N AI ATEA Y EMWAQDA AMYGYAA+S AG L PL+ P+ T PGGL Sbjct 123 IASNVLGQNAAAIAATEAQYGEMWAQDAAAMYGYAASSATAGKLSPLTSPAPTNQPGGLG 182 Query 181 AQSAAVGSAAATAAVNQVS-VADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLA 239 AQ+AAV A AT+A Q S + ++++PN V LA+P D GL+ +D LL Sbjct 183 AQAAAVSGATATSA--QTSGLQGTVANVPNVVRTLAAPA----DPPGLTA----LDNLLG 232 Query 240 TPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAEGAASAAAAGL 299 P V N+ N+ + +W V I + I + L++ A A G GA A Sbjct 233 NPVVNNVGNAGFDVVSWNVFNTIVSNILYNHTLDT----AAAAGVAGEVGGAVGGGALVG 288 Query 300 ADSVTPAGLG-----ASLGEATLVGRLSVPAAWSTAAP---ATTAGATALEGSGWTVAAE 351 A + AG+G AS+G A VG LS PA WS P ATT GAT W AE Sbjct 289 AAAPATAGVGAAPVLASMGSAATVGELSTPATWSAPTPEPAATTVGATE-----WASPAE 343 Query 352 EAGPVTGM---MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV 391 E P T MP +ASA +G G GPRYG KP VMP ++ V Sbjct 344 E--PHTAWATGMPAVASAGRG-GYGMGPRYGVKPKVMPTRLPV 383 >gi|289574372|ref|ZP_06454599.1| PPE family protein [Mycobacterium tuberculosis K85] gi|289538803|gb|EFD43381.1| PPE family protein [Mycobacterium tuberculosis K85] Length=384 Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 177/405 (44%), Positives = 226/405 (56%), Gaps = 44/405 (10%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NS RMY G G+ PM+AA +AWNGLAAEL A YE VIT L TE W+GP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS MV A PY+AW+ TA A A SQA A+AAAYE A+A VPP ++AANRA L +L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 V NV G NT +I ATEA YAEMWAQDA+AMYGYA +S A + P +PP TT+P A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 AQSAAVGSAAATAA-VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLA 239 Q +AV AA T+A Q ++A+LI+ LPN + GL SP++S L + G + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWL-------- 232 Query 240 TPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAP---VAIAEGAIEA--------A 288 W++N +P + N + G P + I I + + Sbjct 233 ---------------EWFINWYLPISQLFYNTV--GLPYFAIGIGNSLITSWRALGWIGS 275 Query 289 EGAASAAAAGLADSVTPAGLG---ASLGEATLVGRLSVPAAWSTAAP--ATTAGATALEG 343 G S AA S G G A LG A +G+LSVP W+ A+P A T G+ + Sbjct 276 RGRRSCRAA-RRPSARVCGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL 334 Query 344 SGWTVAAEEAGPVTGMMPGMA-SAAKGTGAYAGPRYGFKPTVMPK 387 V EAG ++ GM + + AGPRYGF+ TVM + Sbjct 335 VSDIVEQPEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSR 379 >gi|333989641|ref|YP_004522255.1| PPE family protein PPE31_1 [Mycobacterium sp. JDM601] gi|333485609|gb|AEF35001.1| PPE family protein PPE31_1 [Mycobacterium sp. JDM601] Length=424 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 190/423 (45%), Positives = 242/423 (58%), Gaps = 35/423 (8%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +D+ LPPE+NSAR+YAG G+ PMMA +AW GLAAE+ + SYE+ +T+L E+WMGP Sbjct 2 IDYATLPPEVNSARLYAGPGSTPMMAVASAWRGLAAEISSALTSYETTLTQLVDEAWMGP 61 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS++M AA +PYLAWLT T A S+A A+AAA+EAA+ T PP V+AANRA L Sbjct 62 ASVSMTAATKPYLAWLTDTLAKAEDTASRATAAAAAFEAAHGATPPPAVIAANRAQQKQL 121 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATNV+G N+ AIMA++A Y EMWAQ A MY YAA+S A + P S P+QTTNP G A Sbjct 122 VATNVVGQNSAAIMASDAQYLEMWAQAANVMYSYAASSATATQVTPFSEPNQTTNPDGTA 181 Query 181 AQSAAVGS---AAATAAVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGII------ 231 Q+AAVG AA A LISSLPNA+ L SP + L L+G++ Sbjct 182 NQAAAVGQANATAAGNTAQNAQTAQLISSLPNALQTLTSPAPTDLPPPTLAGLVEAFFRN 241 Query 232 ADID---ALLATPFVANIINSAVNTAAWYVNAA-IP--TAIFLANALNS----------- 274 A I+ +LL P + S V T+A + A+ IP T F + N+ Sbjct 242 ASINGVVSLLTYPLNGGM--SFVGTSAAFTPASLIPTMTTFFSGSGFNALGGGSAGAGIG 299 Query 275 -----GAPVAIAEGAIEAAEGAASAAAAGLADSVTPAGLGASLGEATLVGRLS-VPAAWS 328 G P++ GAASAAA S T + A +G+ATLVG LS PA + Sbjct 300 ALLAPGGPLSSLGALGGGTAGAASAAAGAFTASATTPAISAGVGQATLVGELSAPPAWAA 359 Query 329 TAAPATTAGATALEGSGWTVAAEEAGPVTGMMPGMASAAKGTGAYAG-PRYGFKPTVMPK 387 A T A AL+ S W+ A EE + M GM A +G G PRYGFKPTVM + Sbjct 360 AAPAGTAATGDALQASSWSAAPEEIESMAAMPGGMPLGADRSGFGLGTPRYGFKPTVMAR 419 Query 388 QVV 390 VV Sbjct 420 PVV 422 >gi|183982689|ref|YP_001850980.1| PPE family protein [Mycobacterium marinum M] gi|183176015|gb|ACC41125.1| PPE family protein [Mycobacterium marinum M] Length=409 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 199/411 (49%), Positives = 254/411 (62%), Gaps = 32/411 (7%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NS RMY+G G+ PM+AA AAW+ ++AE+ TAA+YESV++ L ++ W+GP Sbjct 6 MDFGALPPEVNSLRMYSGPGSAPMLAAMAAWDDVSAEMLLTAAAYESVLSALLSDGWLGP 65 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS AM AAA PY+ WL+ T AA QA A+AAA+EAA+AMTVPP VVAANR L L Sbjct 66 ASAAMAAAAAPYVTWLSATGLQAAQTAGQAAAAAAAFEAAFAMTVPPSVVAANRVQLLTL 125 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 VATN LGINTPAI ATEA YAEMWAQDA AMYGYAA S A L+P S P+ T + GLA Sbjct 126 VATNFLGINTPAIAATEAEYAEMWAQDATAMYGYAAGSAVASTLEPFSEPAHTASRSGLA 185 Query 181 AQSAAVGSAAATA--AVNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALL 238 Q+AAV AA+TA + Q + L+S++P ++ GLA+P + LD+ SG++ADI L Sbjct 186 GQTAAVAQAASTAMGGLTQTELPQLMSAVPASLQGLAAPAAAPLDTIAGSGLLADILNFL 245 Query 239 A-----------TPFVANIINSAVNTAAWYVNAAIPTAIFLANALN-SGAPVAIAEGAIE 286 +AN + SA TA V A+ +A+ NAL G P G Sbjct 246 DGNDGNAFGIFLNSSLANGVISAGYTAPGIVVPAVTSAMADVNALALDGLP-----GIAL 300 Query 287 AAEGAASAAAAGLADSVTPAGLG---ASLGEATLVGRLSVPAAWSTAAPATTAGATALEG 343 G+ S A +V +GLG A +AT+VGRLSVP +W+ T ATAL G Sbjct 301 PITGSDSGDAVWTRMTVPQSGLGGVAAGTNQATMVGRLSVPPSWAGTTEVTDHVATALPG 360 Query 344 SGWTVAAEEAGPVTGMMPGMASAAKGTGAYA-----GPRYGFKPTVMPKQV 389 +G T A EA + MPG+ GAYA GPRYGF+ T+MP+ + Sbjct 361 AG-TATAPEA---SAAMPGV-PGVPAPGAYARSYGTGPRYGFRLTIMPRPL 406 >gi|240172861|ref|ZP_04751520.1| PPE family protein, PPE31 [Mycobacterium kansasii ATCC 12478] Length=401 Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 194/402 (49%), Positives = 242/402 (61%), Gaps = 25/402 (6%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 +DF LPPEINSARMY+G G+GPM+AA +AW LAAEL TA SY SV+ LT E W GP Sbjct 5 LDFAMLPPEINSARMYSGPGSGPMLAAASAWKSLAAELRATALSYHSVLAALTGEEWYGP 64 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS +M AAA PY+AWL TA A QA A+A AYEAA+ TVPP V+AANRA L AL Sbjct 65 ASASMAAAAAPYVAWLNTTAVQAEQTAVQAEAAAGAYEAAFGATVPPPVIAANRAQLMAL 124 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 +ATN+LG NTPAI ATEA Y EMWAQDA+AMYGYA +S AA L P P Q TNP GLA Sbjct 125 IATNILGQNTPAIAATEAQYTEMWAQDAMAMYGYAGSSAAATQLSPFVEPQQATNPSGLA 184 Query 181 AQSAAVGSAAATAAVNQVS-VADLISSLPNAVSGLASPVTSVLDSTGLSGIIADI----- 234 AQ+AAV A+A +A NQ S ++ LIS +P+A+ GL+ P +ST +I D+ Sbjct 185 AQAAAVTEASANSAGNQSSTLSGLISMVPSALQGLSGP-----NSTSWLQVIWDLLTGSG 239 Query 235 DALLATPF-----VANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIEAAE 289 A T + AN+ N+ +T + + A F+A+ L A+ A AA Sbjct 240 PAWWQTLWNVWGPNANVWNTITSTGLFVPGSTF--APFMASVLAGAVAADAAQDASAAAA 297 Query 290 GAASAAAAGLADSVTPAG--LGASLGEATLVGRLSVPAAWSTAAPATTAGATALEGSGWT 347 G S AAG S G + A LG A +VG+LSVP AW+ AAP + +AL G+ Sbjct 298 GVGSGLAAGPLASTGSVGSAVSAGLGNAGIVGKLSVPPAWTAAAPLHSPLGSALGGTP-M 356 Query 348 VAAEEAGPVTGMMPGM--ASAAKGTGAYAGPRYGFKPTVMPK 387 VA A V MPGM + A A P+YGF+PT + + Sbjct 357 VAPPPA--VAAGMPGMPFGNMAGQPFGRAVPQYGFRPTFVAR 396 >gi|31792891|ref|NP_855384.1| PPE family protein [Mycobacterium bovis AF2122/97] gi|224990087|ref|YP_002644774.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172] gi|289443162|ref|ZP_06432906.1| PPE family protein [Mycobacterium tuberculosis T46] 18 more sequence titles Length=385 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 176/405 (44%), Positives = 226/405 (56%), Gaps = 43/405 (10%) Query 1 MDFGALPPEINSARMYAGAGAGPMMAAGAAWNGLAAELGTTAASYESVITRLTTESWMGP 60 MDFGALPPE+NS RMY G G+ PM+AA +AWNGLAAEL A YE VIT L TE W+GP Sbjct 1 MDFGALPPEVNSGRMYCGPGSAPMVAAASAWNGLAAELSVAAVGYERVITTLQTEEWLGP 60 Query 61 ASMAMVAAAQPYLAWLTYTAEAAAHAGSQAMASAAAYEAAYAMTVPPEVVAANRALLAAL 120 AS MV A PY+AW+ TA A A SQA A+AAAYE A+A VPP ++AANRA L +L Sbjct 61 ASTLMVEAVAPYVAWMRATAIQAEQAASQARAAAAAYETAFAAIVPPPLIAANRARLTSL 120 Query 121 VATNVLGINTPAIMATEALYAEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLA 180 V NV G NT +I ATEA YAEMWAQDA+AMYGYA +S A + P +PP TT+P A Sbjct 121 VTHNVFGQNTASIAATEAQYAEMWAQDAMAMYGYAGSSATATKVTPFAPPPNTTSPSAAA 180 Query 181 AQSAAVGSAAATAA-VNQVSVADLISSLPNAVSGLASPVTSVLDSTGLSGIIADIDALLA 239 Q +AV AA T+A Q ++A+LI+ LPN + GL SP++S L + G + Sbjct 181 TQLSAVAKAAGTSAGAAQSAIAELIAHLPNTLLGLTSPLSSALTAAATPGWL-------- 232 Query 240 TPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAP---VAIAEGAIEAAEG------ 290 W++N +P + N + G P + I I + Sbjct 233 ---------------EWFINWYLPISQLFYNTV--GLPYFAIGIGNSLITSWRALGWIGP 275 Query 291 -----AASAAAAGLADSVTPAGLGASLGEATLVGRLSVPAAWSTAAP--ATTAGATALEG 343 AA+A AA A + A LG A +G+LSVP W+ A+P A T G+ + Sbjct 276 EAAEAAAAAPAAVGAAVGGTGPVSAGLGNAATIGKLSVPPNWAGASPSLAPTVGSASAPL 335 Query 344 SGWTVAAEEAGPVTGMMPGMA-SAAKGTGAYAGPRYGFKPTVMPK 387 V EAG ++ GM + + AGPRYGF+ TVM + Sbjct 336 VSDIVEQPEAGAAGNLLGGMPLAGSGTGTGGAGPRYGFRVTVMSR 380 Lambda K H 0.312 0.122 0.346 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 768123887500 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40