BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1041c Length=287 Score E Sequences producing significant alignments: (Bits) Value gi|15608181|ref|NP_215557.1| IS like-2 transposase [Mycobacteriu... 576 1e-162 gi|289442465|ref|ZP_06432209.1| transposase [Mycobacterium tuber... 575 2e-162 gi|148822365|ref|YP_001287119.1| transposase [Mycobacterium tube... 574 6e-162 gi|340625958|ref|YP_004744410.1| ismt1 transposase b [Mycobacter... 571 5e-161 gi|340625719|ref|YP_004744171.1| transposase [Mycobacterium cane... 569 2e-160 gi|308369442|ref|ZP_07666737.1| transposase [Mycobacterium tuber... 564 7e-159 gi|289753218|ref|ZP_06512596.1| transposase [Mycobacterium tuber... 476 1e-132 gi|581366|emb|CAA46571.1| transposase [Mycobacterium tuberculosi... 380 1e-103 gi|298524539|ref|ZP_07011948.1| transposase [Mycobacterium tuber... 369 2e-100 gi|289442582|ref|ZP_06432326.1| LOW QUALITY PROTEIN: IS4 family ... 369 4e-100 gi|308370555|ref|ZP_07421990.2| transposase [Mycobacterium tuber... 368 7e-100 gi|289749689|ref|ZP_06509067.1| transposase [Mycobacterium tuber... 366 2e-99 gi|340626163|ref|YP_004744615.1| transposase [Mycobacterium cane... 363 1e-98 gi|308375394|ref|ZP_07443744.2| transposase [Mycobacterium tuber... 360 2e-97 gi|306783865|ref|ZP_07422187.1| transposase [Mycobacterium tuber... 331 9e-89 gi|323720362|gb|EGB29457.1| transposase [Mycobacterium tuberculo... 319 4e-85 gi|308373009|ref|ZP_07430731.2| transposase [Mycobacterium tuber... 310 2e-82 gi|306781904|ref|ZP_07420241.1| transposase [Mycobacterium tuber... 307 1e-81 gi|306783744|ref|ZP_07422066.1| transposase [Mycobacterium tuber... 300 1e-79 gi|308370046|ref|ZP_07420114.2| transposase [Mycobacterium tuber... 298 9e-79 gi|167970116|ref|ZP_02552393.1| ISMt1 transposase B [Mycobacteri... 293 2e-77 gi|306802839|ref|ZP_07439507.1| transposase [Mycobacterium tuber... 292 4e-77 gi|148822250|ref|YP_001287004.1| transposase [Mycobacterium tube... 291 9e-77 gi|167969295|ref|ZP_02551572.1| ISMt1 transposase B [Mycobacteri... 291 1e-76 gi|308376594|ref|ZP_07439387.2| transposase [Mycobacterium tuber... 286 2e-75 gi|306788230|ref|ZP_07426552.1| transposase [Mycobacterium tuber... 281 6e-74 gi|306792885|ref|ZP_07431187.1| transposase [Mycobacterium tuber... 279 4e-73 gi|307083578|ref|ZP_07492691.1| transposase [Mycobacterium tuber... 268 6e-70 gi|307083700|ref|ZP_07492813.1| transposase [Mycobacterium tuber... 261 1e-67 gi|323720544|gb|EGB29626.1| transposase [Mycobacterium tuberculo... 257 2e-66 gi|306796961|ref|ZP_07435263.1| hypothetical protein TMFG_02336 ... 248 8e-64 gi|306796831|ref|ZP_07435133.1| hypothetical protein TMFG_02864 ... 228 8e-58 gi|33867220|ref|NP_898778.1| putative transposase [Rhodococcus e... 225 8e-57 gi|296164175|ref|ZP_06846778.1| transposase [Mycobacterium paras... 223 2e-56 gi|226349999|ref|YP_002777112.1| putative transposase orfB for i... 223 2e-56 gi|307079016|ref|ZP_07488186.1| hypothetical protein TMKG_01534 ... 218 1e-54 gi|111025393|ref|YP_707813.1| transposase [Rhodococcus jostii RH... 194 2e-47 gi|238516682|gb|ACR43975.1| putative transposase [Rhodococcus op... 186 4e-45 gi|315501927|ref|YP_004080814.1| transposase [Micromonospora sp.... 167 2e-39 gi|111026182|ref|YP_708465.1| transposase, C-terminal [Rhodococc... 161 1e-37 gi|110825897|gb|ABH01025.1| transposase [Rhodococcus opacus] 157 3e-36 gi|256379463|ref|YP_003103123.1| transposase IS4 family protein ... 154 1e-35 gi|315063828|gb|ADT78167.1| transposase [Rhodococcus sp. NCIMB 1... 154 2e-35 gi|296119137|ref|ZP_06837708.1| transposase, IS4 family [Coryneb... 152 5e-35 gi|257069701|ref|YP_003155956.1| transposase [Brachybacterium fa... 152 5e-35 gi|257067256|ref|YP_003153511.1| transposase [Brachybacterium fa... 152 6e-35 gi|226349344|ref|YP_002776458.1| putative transposase orfB for i... 150 2e-34 gi|226349579|ref|YP_002776693.1| putative transposase orfB for i... 150 2e-34 gi|291445408|ref|ZP_06584798.1| LOW QUALITY PROTEIN: transposase... 146 3e-33 gi|291443598|ref|ZP_06582988.1| LOW QUALITY PROTEIN: transposase... 146 3e-33 >gi|15608181|ref|NP_215557.1| IS like-2 transposase [Mycobacterium tuberculosis H37Rv] gi|148660825|ref|YP_001282348.1| ISMt1 transposase B [Mycobacterium tuberculosis H37Ra] gi|148660937|ref|YP_001282460.1| ISMt1 transposase B [Mycobacterium tuberculosis H37Ra] 31 more sequence titles Length=287 Score = 576 bits (1485), Expect = 1e-162, Method: Compositional matrix adjust. Identities = 287/287 (100%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP Sbjct 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 >gi|289442465|ref|ZP_06432209.1| transposase [Mycobacterium tuberculosis T46] gi|289446623|ref|ZP_06436367.1| transposase [Mycobacterium tuberculosis CPHL_A] gi|289446739|ref|ZP_06436483.1| transposase [Mycobacterium tuberculosis CPHL_A] 16 more sequence titles Length=287 Score = 575 bits (1482), Expect = 2e-162, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 287/287 (100%), Gaps = 0/287 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP Sbjct 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALS+YKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSNYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 >gi|148822365|ref|YP_001287119.1| transposase [Mycobacterium tuberculosis F11] gi|148720892|gb|ABR05517.1| transposase [Mycobacterium tuberculosis F11] Length=287 Score = 574 bits (1479), Expect = 6e-162, Method: Compositional matrix adjust. Identities = 286/287 (99%), Positives = 286/287 (99%), Gaps = 0/287 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP Sbjct 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPER DQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERHDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 >gi|340625958|ref|YP_004744410.1| ismt1 transposase b [Mycobacterium canettii CIPT 140010059] gi|340627027|ref|YP_004745479.1| ismt1 transposase B [Mycobacterium canettii CIPT 140010059] gi|340004148|emb|CCC43286.1| ismt1 transposase b [Mycobacterium canettii CIPT 140010059] gi|340005217|emb|CCC44370.1| ismt1 transposase B [Mycobacterium canettii CIPT 140010059] Length=287 Score = 571 bits (1471), Expect = 5e-161, Method: Compositional matrix adjust. Identities = 284/287 (99%), Positives = 285/287 (99%), Gaps = 0/287 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRAS ADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVP TRCSP Sbjct 1 MRASAADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPTTRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALS+YKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSNYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 >gi|340625719|ref|YP_004744171.1| transposase [Mycobacterium canettii CIPT 140010059] gi|340003909|emb|CCC43043.1| transposase [Mycobacterium canettii CIPT 140010059] Length=287 Score = 569 bits (1466), Expect = 2e-160, Method: Compositional matrix adjust. Identities = 283/287 (99%), Positives = 284/287 (99%), Gaps = 0/287 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRAS ADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVP TRCSP Sbjct 1 MRASAADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPTTRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALS+YKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSNYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLG VLLACAVIHARVGTPKLGDTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGSVLLACAVIHARVGTPKLGDTP 287 >gi|308369442|ref|ZP_07666737.1| transposase [Mycobacterium tuberculosis SUMu002] gi|308327602|gb|EFP16453.1| transposase [Mycobacterium tuberculosis SUMu002] Length=286 Score = 564 bits (1453), Expect = 7e-159, Method: Compositional matrix adjust. Identities = 281/282 (99%), Positives = 281/282 (99%), Gaps = 0/282 (0%) Query 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP Sbjct 1 MRASPADGLAITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSP 60 Query 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA Sbjct 61 TLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHA 120 Query 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR Sbjct 121 IGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR 180 Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPK 282 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTP Sbjct 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPN 282 >gi|289753218|ref|ZP_06512596.1| transposase [Mycobacterium tuberculosis EAS054] gi|289693805|gb|EFD61234.1| transposase [Mycobacterium tuberculosis EAS054] Length=236 Score = 476 bits (1226), Expect = 1e-132, Method: Compositional matrix adjust. Identities = 235/236 (99%), Positives = 236/236 (100%), Gaps = 0/236 (0%) Query 52 MVPATRCSPTLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKK 111 MVPATRCSPTLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALS+YKK Sbjct 1 MVPATRCSPTLPRCSGWTLRWPRISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSNYKK 60 Query 112 SADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTE 171 SADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTE Sbjct 61 SADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTE 120 Query 172 YALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAA 231 YALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAA Sbjct 121 YALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAA 180 Query 232 LYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 LYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 181 LYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 236 >gi|581366|emb|CAA46571.1| transposase [Mycobacterium tuberculosis H37Rv] Length=308 Score = 380 bits (977), Expect = 1e-103, Method: Compositional matrix adjust. Identities = 190/191 (99%), Positives = 190/191 (99%), Gaps = 0/191 (0%) Query 97 ARTRSPQGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNP 156 ARTRSPQGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNP Sbjct 118 ARTRSPQGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNP 177 Query 157 QLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRK 216 QLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPER DQIDRRK Sbjct 178 QLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERHDQIDRRK 237 Query 217 AKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHA 276 AKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHA Sbjct 238 AKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHA 297 Query 277 RVGTPKLGDTP 287 RVGTPKLGDTP Sbjct 298 RVGTPKLGDTP 308 >gi|298524539|ref|ZP_07011948.1| transposase [Mycobacterium tuberculosis 94_M4241A] gi|298494333|gb|EFI29627.1| transposase [Mycobacterium tuberculosis 94_M4241A] Length=305 Score = 369 bits (948), Expect = 2e-100, Method: Compositional matrix adjust. Identities = 184/184 (100%), Positives = 184/184 (100%), Gaps = 0/184 (0%) Query 104 GALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD 163 GALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD Sbjct 122 GALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD 181 Query 164 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG 223 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG Sbjct 182 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG 241 Query 224 RPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 283 RPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL Sbjct 242 RPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 301 Query 284 GDTP 287 GDTP Sbjct 302 GDTP 305 >gi|289442582|ref|ZP_06432326.1| LOW QUALITY PROTEIN: IS4 family Transposase [Mycobacterium tuberculosis T46] gi|289415501|gb|EFD12741.1| LOW QUALITY PROTEIN: IS4 family Transposase [Mycobacterium tuberculosis T46] Length=183 Score = 369 bits (946), Expect = 4e-100, Method: Compositional matrix adjust. Identities = 182/183 (99%), Positives = 183/183 (100%), Gaps = 0/183 (0%) Query 105 ALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDD 164 ALS+YKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDD Sbjct 1 ALSNYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDD 60 Query 165 YRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGR 224 YRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGR Sbjct 61 YRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGR 120 Query 225 PPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLG 284 PPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLG Sbjct 121 PPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLG 180 Query 285 DTP 287 DTP Sbjct 181 DTP 183 >gi|308370555|ref|ZP_07421990.2| transposase [Mycobacterium tuberculosis SUMu003] gi|308331554|gb|EFP20405.1| transposase [Mycobacterium tuberculosis SUMu003] Length=182 Score = 368 bits (944), Expect = 7e-100, Method: Compositional matrix adjust. Identities = 181/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 106 LSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 165 +SDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY Sbjct 1 MSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 60 Query 166 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 225 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP Sbjct 61 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 120 Query 226 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 285 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD Sbjct 121 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 180 Query 286 TP 287 TP Sbjct 181 TP 182 >gi|289749689|ref|ZP_06509067.1| transposase [Mycobacterium tuberculosis T92] gi|289757244|ref|ZP_06516622.1| transposase [Mycobacterium tuberculosis T85] gi|289690276|gb|EFD57705.1| transposase [Mycobacterium tuberculosis T92] gi|289712808|gb|EFD76820.1| transposase [Mycobacterium tuberculosis T85] Length=182 Score = 366 bits (940), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 180/182 (99%), Positives = 182/182 (100%), Gaps = 0/182 (0%) Query 106 LSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 165 +S+YKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY Sbjct 1 MSNYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 60 Query 166 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 225 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP Sbjct 61 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 120 Query 226 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 285 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD Sbjct 121 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 180 Query 286 TP 287 TP Sbjct 181 TP 182 >gi|340626163|ref|YP_004744615.1| transposase [Mycobacterium canettii CIPT 140010059] gi|340004353|emb|CCC43496.1| transposase [Mycobacterium canettii CIPT 140010059] Length=308 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 182/184 (99%), Positives = 183/184 (99%), Gaps = 0/184 (0%) Query 104 GALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD 163 GALS+YKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD Sbjct 125 GALSNYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLD 184 Query 164 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG 223 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG Sbjct 185 DYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGG 244 Query 224 RPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 283 RPPAFDAALYGLRNTVERGFHRLKQ RGIATRYDKYALTYLGGVLLACAVIHARVGTPKL Sbjct 245 RPPAFDAALYGLRNTVERGFHRLKQSRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 304 Query 284 GDTP 287 GDTP Sbjct 305 GDTP 308 >gi|308375394|ref|ZP_07443744.2| transposase [Mycobacterium tuberculosis SUMu007] gi|308346492|gb|EFP35343.1| transposase [Mycobacterium tuberculosis SUMu007] Length=178 Score = 360 bits (923), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 177/178 (99%), Positives = 178/178 (100%), Gaps = 0/178 (0%) Query 106 LSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 165 +SDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY Sbjct 1 MSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDY 60 Query 166 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 225 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP Sbjct 61 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 120 Query 226 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 283 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL Sbjct 121 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKL 178 >gi|306783865|ref|ZP_07422187.1| transposase [Mycobacterium tuberculosis SUMu003] gi|308331356|gb|EFP20207.1| transposase [Mycobacterium tuberculosis SUMu003] Length=165 Score = 331 bits (848), Expect = 9e-89, Method: Compositional matrix adjust. Identities = 164/164 (100%), Positives = 164/164 (100%), Gaps = 0/164 (0%) Query 124 SRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLA 183 SRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLA Sbjct 2 SRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLA 61 Query 184 DKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGF 243 DKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGF Sbjct 62 DKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGF 121 Query 244 HRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 HRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 122 HRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 165 >gi|323720362|gb|EGB29457.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=157 Score = 319 bits (817), Expect = 4e-85, Method: Compositional matrix adjust. Identities = 157/157 (100%), Positives = 157/157 (100%), Gaps = 0/157 (0%) Query 131 KIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHP 190 KIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHP Sbjct 1 KIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHP 60 Query 191 STRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWR 250 STRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWR Sbjct 61 STRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWR 120 Query 251 GIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 GIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 GIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 157 >gi|308373009|ref|ZP_07430731.2| transposase [Mycobacterium tuberculosis SUMu005] gi|308339096|gb|EFP27947.1| transposase [Mycobacterium tuberculosis SUMu005] Length=153 Score = 310 bits (793), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 152/153 (99%), Positives = 153/153 (100%), Gaps = 0/153 (0%) Query 135 LTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRA 194 +TDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRA Sbjct 1 MTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRA 60 Query 195 ALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIAT 254 ALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIAT Sbjct 61 ALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIAT 120 Query 255 RYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 RYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 153 >gi|306781904|ref|ZP_07420241.1| transposase [Mycobacterium tuberculosis SUMu002] gi|306788097|ref|ZP_07426419.1| transposase [Mycobacterium tuberculosis SUMu004] gi|308325362|gb|EFP14213.1| transposase [Mycobacterium tuberculosis SUMu002] gi|308335289|gb|EFP24140.1| transposase [Mycobacterium tuberculosis SUMu004] Length=151 Score = 307 bits (786), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 151/151 (100%), Positives = 151/151 (100%), Gaps = 0/151 (0%) Query 137 DQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAAL 196 DQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAAL Sbjct 1 DQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAAL 60 Query 197 RSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRY 256 RSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRY Sbjct 61 RSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRY 120 Query 257 DKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 DKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 DKYALTYLGGVLLACAVIHARVGTPKLGDTP 151 >gi|306783744|ref|ZP_07422066.1| transposase [Mycobacterium tuberculosis SUMu003] gi|308331482|gb|EFP20333.1| transposase [Mycobacterium tuberculosis SUMu003] Length=148 Score = 300 bits (769), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 148/148 (100%), Positives = 148/148 (100%), Gaps = 0/148 (0%) Query 140 EAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSK 199 EAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSK Sbjct 1 EAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSK 60 Query 200 KIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKY 259 KIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKY Sbjct 61 KIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKY 120 Query 260 ALTYLGGVLLACAVIHARVGTPKLGDTP 287 ALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 ALTYLGGVLLACAVIHARVGTPKLGDTP 148 >gi|308370046|ref|ZP_07420114.2| transposase [Mycobacterium tuberculosis SUMu002] gi|308325484|gb|EFP14335.1| transposase [Mycobacterium tuberculosis SUMu002] Length=151 Score = 298 bits (762), Expect = 9e-79, Method: Compositional matrix adjust. Identities = 146/147 (99%), Positives = 147/147 (100%), Gaps = 0/147 (0%) Query 141 APVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKK 200 +PVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKK Sbjct 5 SPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKK 64 Query 201 IKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYA 260 IKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYA Sbjct 65 IKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYA 124 Query 261 LTYLGGVLLACAVIHARVGTPKLGDTP 287 LTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 125 LTYLGGVLLACAVIHARVGTPKLGDTP 151 >gi|167970116|ref|ZP_02552393.1| ISMt1 transposase B [Mycobacterium tuberculosis H37Ra] gi|253799926|ref|YP_003032927.1| transposase [Mycobacterium tuberculosis KZN 1435] gi|254363955|ref|ZP_04980001.1| hypothetical IS like-2 transposase [Mycobacterium tuberculosis str. Haarlem] 31 more sequence titles Length=145 Score = 293 bits (750), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%) Query 143 VRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 202 +RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK Sbjct 1 MRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 60 Query 203 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 262 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT Sbjct 61 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 120 Query 263 YLGGVLLACAVIHARVGTPKLGDTP 287 YLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 YLGGVLLACAVIHARVGTPKLGDTP 145 >gi|306802839|ref|ZP_07439507.1| transposase [Mycobacterium tuberculosis SUMu008] gi|308350452|gb|EFP39303.1| transposase [Mycobacterium tuberculosis SUMu008] Length=144 Score = 292 bits (748), Expect = 4e-77, Method: Compositional matrix adjust. Identities = 144/144 (100%), Positives = 144/144 (100%), Gaps = 0/144 (0%) Query 144 RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKH 203 RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKH Sbjct 1 RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKH 60 Query 204 TIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTY 263 TIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTY Sbjct 61 TIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTY 120 Query 264 LGGVLLACAVIHARVGTPKLGDTP 287 LGGVLLACAVIHARVGTPKLGDTP Sbjct 121 LGGVLLACAVIHARVGTPKLGDTP 144 >gi|148822250|ref|YP_001287004.1| transposase [Mycobacterium tuberculosis F11] gi|308378855|ref|ZP_07484071.2| transposase [Mycobacterium tuberculosis SUMu010] gi|308379991|ref|ZP_07488307.2| transposase [Mycobacterium tuberculosis SUMu011] gi|308380077|ref|ZP_07488625.2| transposase [Mycobacterium tuberculosis SUMu011] gi|148720777|gb|ABR05402.1| transposase [Mycobacterium tuberculosis F11] gi|308359055|gb|EFP47906.1| transposase [Mycobacterium tuberculosis SUMu010] gi|308362691|gb|EFP51542.1| transposase [Mycobacterium tuberculosis SUMu011] gi|308362980|gb|EFP51831.1| transposase [Mycobacterium tuberculosis SUMu011] Length=145 Score = 291 bits (745), Expect = 9e-77, Method: Compositional matrix adjust. Identities = 143/145 (99%), Positives = 144/145 (99%), Gaps = 0/145 (0%) Query 143 VRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 202 +RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK Sbjct 1 MRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 60 Query 203 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 262 HTIPER DQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT Sbjct 61 HTIPERHDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 120 Query 263 YLGGVLLACAVIHARVGTPKLGDTP 287 YLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 YLGGVLLACAVIHARVGTPKLGDTP 145 >gi|167969295|ref|ZP_02551572.1| ISMt1 transposase B [Mycobacterium tuberculosis H37Ra] Length=145 Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust. Identities = 143/145 (99%), Positives = 144/145 (99%), Gaps = 0/145 (0%) Query 143 VRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 202 +RIR TAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK Sbjct 1 MRIRSTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 60 Query 203 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 262 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT Sbjct 61 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 120 Query 263 YLGGVLLACAVIHARVGTPKLGDTP 287 YLGGVLLACAVIHARVGTPKLGDTP Sbjct 121 YLGGVLLACAVIHARVGTPKLGDTP 145 >gi|308376594|ref|ZP_07439387.2| transposase [Mycobacterium tuberculosis SUMu008] gi|308350569|gb|EFP39420.1| transposase [Mycobacterium tuberculosis SUMu008] Length=141 Score = 286 bits (733), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 140/141 (99%), Positives = 141/141 (100%), Gaps = 0/141 (0%) Query 147 LTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIP 206 +TAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIP Sbjct 1 MTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIP 60 Query 207 ERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGG 266 ERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGG Sbjct 61 ERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGG 120 Query 267 VLLACAVIHARVGTPKLGDTP 287 VLLACAVIHARVGTPKLGDTP Sbjct 121 VLLACAVIHARVGTPKLGDTP 141 >gi|306788230|ref|ZP_07426552.1| transposase [Mycobacterium tuberculosis SUMu004] gi|308335170|gb|EFP24021.1| transposase [Mycobacterium tuberculosis SUMu004] Length=138 Score = 281 bits (720), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 138/138 (100%), Positives = 138/138 (100%), Gaps = 0/138 (0%) Query 150 GQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQ 209 GQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQ Sbjct 1 GQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQ 60 Query 210 DQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLL 269 DQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLL Sbjct 61 DQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLL 120 Query 270 ACAVIHARVGTPKLGDTP 287 ACAVIHARVGTPKLGDTP Sbjct 121 ACAVIHARVGTPKLGDTP 138 >gi|306792885|ref|ZP_07431187.1| transposase [Mycobacterium tuberculosis SUMu005] gi|308338677|gb|EFP27528.1| transposase [Mycobacterium tuberculosis SUMu005] Length=138 Score = 279 bits (714), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 137/138 (99%), Positives = 138/138 (100%), Gaps = 0/138 (0%) Query 143 VRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 202 +RIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK Sbjct 1 MRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIK 60 Query 203 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 262 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT Sbjct 61 HTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALT 120 Query 263 YLGGVLLACAVIHARVGT 280 YLGGVLLACAVIHARVGT Sbjct 121 YLGGVLLACAVIHARVGT 138 >gi|307083578|ref|ZP_07492691.1| transposase [Mycobacterium tuberculosis SUMu012] gi|308366746|gb|EFP55597.1| transposase [Mycobacterium tuberculosis SUMu012] Length=140 Score = 268 bits (686), Expect = 6e-70, Method: Compositional matrix adjust. Identities = 132/133 (99%), Positives = 132/133 (99%), Gaps = 0/133 (0%) Query 155 NPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDR 214 PQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDR Sbjct 8 QPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDR 67 Query 215 RKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI 274 RKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI Sbjct 68 RKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI 127 Query 275 HARVGTPKLGDTP 287 HARVGTPKLGDTP Sbjct 128 HARVGTPKLGDTP 140 >gi|307083700|ref|ZP_07492813.1| transposase [Mycobacterium tuberculosis SUMu012] gi|308366630|gb|EFP55481.1| transposase [Mycobacterium tuberculosis SUMu012] Length=128 Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%) Query 160 PLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG 219 PLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG Sbjct 1 PLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG 60 Query 220 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG 279 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG Sbjct 61 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG 120 Query 280 TPKLGDTP 287 TPKLGDTP Sbjct 121 TPKLGDTP 128 >gi|323720544|gb|EGB29626.1| transposase [Mycobacterium tuberculosis CDC1551A] Length=126 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 126/126 (100%), Positives = 126/126 (100%), Gaps = 0/126 (0%) Query 162 LDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSA 221 LDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSA Sbjct 1 LDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSA 60 Query 222 GGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTP 281 GGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTP Sbjct 61 GGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTP 120 Query 282 KLGDTP 287 KLGDTP Sbjct 121 KLGDTP 126 >gi|306796961|ref|ZP_07435263.1| hypothetical protein TMFG_02336 [Mycobacterium tuberculosis SUMu006] gi|308342645|gb|EFP31496.1| hypothetical protein TMFG_02336 [Mycobacterium tuberculosis SUMu006] Length=122 Score = 248 bits (633), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 122/122 (100%), Positives = 122/122 (100%), Gaps = 0/122 (0%) Query 166 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 225 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP Sbjct 1 RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRP 60 Query 226 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 285 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD Sbjct 61 PAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGD 120 Query 286 TP 287 TP Sbjct 121 TP 122 >gi|306796831|ref|ZP_07435133.1| hypothetical protein TMFG_02864 [Mycobacterium tuberculosis SUMu006] gi|308342768|gb|EFP31619.1| hypothetical protein TMFG_02864 [Mycobacterium tuberculosis SUMu006] Length=112 Score = 228 bits (581), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%) Query 176 STDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGL 235 STDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGL Sbjct 1 STDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGL 60 Query 236 RNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 61 RNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 112 >gi|33867220|ref|NP_898778.1| putative transposase [Rhodococcus erythropolis] gi|33669054|gb|AAP74048.1| putative transposase [Rhodococcus erythropolis] Length=175 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 120/176 (69%), Positives = 133/176 (76%), Gaps = 6/176 (3%) Query 103 QGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLL 162 QGA S+ K A+EP DHA+GRSRGGL+TKIHALTD P+ + L+ GQAGDNP L PLL Sbjct 4 QGARSNDKNLANEPADHALGRSRGGLSTKIHALTDTFCCPLTLLLSPGQAGDNPYLAPLL 63 Query 163 DDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAG 222 D +R A + FRLLADKAYSHPSTR LR ++I HTIPER+DQI RRKAKGS G Sbjct 64 DAHR------AHDTAAFRLLADKAYSHPSTRKNLRERRISHTIPERRDQIRRRKAKGSDG 117 Query 223 GRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARV 278 GRPPAFD Y RNTVERGF RLKQWR IATRYDKYA T+LGGVL A VIH RV Sbjct 118 GRPPAFDKDRYRGRNTVERGFGRLKQWRDIATRYDKYATTFLGGVLFAALVIHHRV 173 >gi|296164175|ref|ZP_06846778.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295900470|gb|EFG79873.1| transposase [Mycobacterium parascrofulaceum ATCC BAA-614] Length=146 Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 107/132 (82%), Positives = 117/132 (89%), Gaps = 0/132 (0%) Query 145 IRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHT 204 +RLTAGQAGDNPQL+ LLDDY + + DFRLLADKAYSHPSTR LRS++IKHT Sbjct 3 VRLTAGQAGDNPQLMALLDDYAATCRDSDQSADDFRLLADKAYSHPSTRTQLRSRRIKHT 62 Query 205 IPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYL 264 IPER+DQIDRRKAKGSAGGRPPAFDA +Y LRNTVERGF+RLKQWRGIATRYDKYALTYL Sbjct 63 IPERRDQIDRRKAKGSAGGRPPAFDAEIYALRNTVERGFNRLKQWRGIATRYDKYALTYL 122 Query 265 GGVLLACAVIHA 276 GGVLLACAVIH+ Sbjct 123 GGVLLACAVIHS 134 >gi|226349999|ref|YP_002777112.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] gi|226245911|dbj|BAH47175.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] Length=175 Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 119/176 (68%), Positives = 131/176 (75%), Gaps = 6/176 (3%) Query 103 QGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLL 162 QGA S+ K A+EP DHA+GRSRGGL+TKIHALTD P+ + L+ GQAGDNP L PLL Sbjct 4 QGARSNDKNLANEPADHALGRSRGGLSTKIHALTDTFCCPLTLLLSPGQAGDNPYLAPLL 63 Query 163 DDYRHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAG 222 D +R A + FRLLADKAYSHPSTR LR ++I HTIPER DQI RRK KGS G Sbjct 64 DAHR------AHDTAAFRLLADKAYSHPSTRKNLRERRISHTIPERCDQIRRRKTKGSDG 117 Query 223 GRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARV 278 GRPPAFD Y RN VERGF RLKQWRGIATRYDKYA T+LGGVL A VIH RV Sbjct 118 GRPPAFDKDRYRERNAVERGFGRLKQWRGIATRYDKYATTFLGGVLFAALVIHHRV 173 >gi|307079016|ref|ZP_07488186.1| hypothetical protein TMKG_01534 [Mycobacterium tuberculosis SUMu011] gi|308363092|gb|EFP51943.1| hypothetical protein TMKG_01534 [Mycobacterium tuberculosis SUMu011] Length=107 Score = 218 bits (554), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 107/107 (100%), Positives = 107/107 (100%), Gaps = 0/107 (0%) Query 181 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 240 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE Sbjct 1 LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVE 60 Query 241 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP Sbjct 61 RGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 107 >gi|111025393|ref|YP_707813.1| transposase [Rhodococcus jostii RHA1] gi|110824372|gb|ABG99655.1| probable transposase [Rhodococcus jostii RHA1] Length=276 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 125/274 (46%), Positives = 148/274 (55%), Gaps = 28/274 (10%) Query 11 ITGLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSPTLPRCSGWTL 70 ITG W+G G V RGG S G+RCGS I +P + G++ Sbjct 10 ITGSWWRGCSIGCVPGSRGGIYLRISAPGRRCGSGIDA----------TPGMEHGIGYSW 59 Query 71 RWPR--------ISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHAIG 122 WPR I R CRWIP CG TS P R QG L +Y DEP DH IG Sbjct 60 PWPRWPIPVATWIGR--CRWIPPWCGCTSTAPTP---RVAQGDLPNYTNLLDEPVDHGIG 114 Query 123 RSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR-- 180 RSRGGLT K+H D P+ + + GQAGD+P PLL+ G+ R Sbjct 115 RSRGGLTCKVHLACDGDGRPLSVLVGPGQAGDSPMFGPLLEGI--CVPRIGGGAPRTRPD 172 Query 181 -LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTV 239 + ADKAY+ + R LRSK IK IPE+ DQ+ RK KGSAGGRPP FDA Y RN V Sbjct 173 EVRADKAYTSKANRELLRSKGIKAVIPEKSDQVANRKNKGSAGGRPPNFDAESYKGRNVV 232 Query 240 ERGFHRLKQWRGIATRYDKYALTYLGGVLLACAV 273 ER F+++KQWR +ATRYDK ALTY G LLA V Sbjct 233 ERAFNKVKQWRAVATRYDKLALTYRAGFLLAGIV 266 >gi|238516682|gb|ACR43975.1| putative transposase [Rhodococcus opacus] Length=289 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 126/286 (45%), Positives = 151/286 (53%), Gaps = 32/286 (11%) Query 13 GLSWKGSRGGSVREVRGGTCPLSSGRGKRCGSAITVGRWMVPATRCSPTLPRCSGWTL-- 70 G W+G G V RGG S G+RCG+ T +P + R G++ Sbjct 12 GSWWRGCSTGCVPGSRGGIYLRISAPGRRCGNG----------TDATPGMERGIGYSXPW 61 Query 71 -RWPR-----ISRSCCRWIPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHAIGRS 124 RWP I R CRWIP CG TS P R QG L +Y DEP DH IGRS Sbjct 62 RRWPMPVATWIGR--CRWIPPWCGCTSTAPTP---RVTQGDLPNYTNLLDEPVDHGIGRS 116 Query 125 RGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDFR---L 181 RGGLT K+H D P+ + + GQAGD+P PLL+ G+ R + Sbjct 117 RGGLTCKVHLACDGDGRPLSVLVGPGQAGDSPMFGPLLEGI--CVPRIGGGAPRTRPDEV 174 Query 182 LADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVER 241 ADKAY+ + R LRSK IK IPE+ DQ+ RK KGSAGGRPP FDA Y RN VER Sbjct 175 RADKAYTSKANRELLRSKGIKAVIPEKSDQVANRKNKGSAGGRPPNFDAESYKGRNVVER 234 Query 242 GFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVGTPKLGDTP 287 F++ KQWR +ATRYDK ALTY G LL V ++ LGD P Sbjct 235 AFNKAKQWRAVATRYDKLALTYRAGFLLTGIVEWLKL----LGDMP 276 >gi|315501927|ref|YP_004080814.1| transposase [Micromonospora sp. L5] gi|315408546|gb|ADU06663.1| transposase [Micromonospora sp. L5] Length=288 Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/161 (60%), Positives = 107/161 (67%), Gaps = 5/161 (3%) Query 117 DDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGS 176 D AIGRSRGGL+TKIH D R P+ I LT GQAGDNPQLL LLD R + G Sbjct 127 DGEAIGRSRGGLSTKIHLAVDGRGRPLSILLTPGQAGDNPQLLALLDAIR--VNQPGPGR 184 Query 177 TDFR---LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALY 233 R L+ADK Y+H STR ALR + I+H IPER DQI RR AKGS GGRPPAFD A Y Sbjct 185 PRKRPDVLIADKGYAHDSTRRALRQRGIRHVIPERSDQIARRAAKGSTGGRPPAFDKATY 244 Query 234 GLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI 274 RN VER F+RLKQWR +ATRY K A Y ++L A+I Sbjct 245 RKRNVVERCFNRLKQWRDLATRYAKRASLYRASLILIAAII 285 >gi|111026182|ref|YP_708465.1| transposase, C-terminal [Rhodococcus jostii RHA1] gi|110825025|gb|ABH00307.1| possible transposase, C-terminal [Rhodococcus jostii RHA1] Length=184 Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/188 (50%), Positives = 112/188 (60%), Gaps = 9/188 (4%) Query 103 QGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLL 162 QG L +Y DEP DH IGRSRGGLT K+H D P+ + + GQAGD+P PLL Sbjct 3 QGDLPNYTNLLDEPVDHGIGRSRGGLTCKVHLACDGDGRPLSVLVGPGQAGDSPMFGPLL 62 Query 163 DDYRHASTEYALGSTDFR---LLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG 219 + G+ R + ADKAY+ + R LRSK IK IPE+ DQ+ RK KG Sbjct 63 EGI--CVPRIGGGAPRTRPDEVRADKAYTSKANRELLRSKGIKAVIPEKSDQVANRKNKG 120 Query 220 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG 279 SAGGRPP FDA Y RN VER F++ KQWR +ATRYDK ALTY G LLA V ++ Sbjct 121 SAGGRPPNFDAESYKGRNVVERAFNKAKQWRAVATRYDKLALTYRAGFLLAGIVEWLKL- 179 Query 280 TPKLGDTP 287 LGD P Sbjct 180 ---LGDMP 184 >gi|110825897|gb|ABH01025.1| transposase [Rhodococcus opacus] Length=201 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 98/208 (48%), Positives = 116/208 (56%), Gaps = 12/208 (5%) Query 83 IPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAP 142 IP+ G S R P T QG L +Y DEP DH IGRSRGGLT+K H D P Sbjct 3 IPQWSGSISTVRTPPAT---QGDLPNYTNLRDEPADHGIGRSRGGLTSKAHLACDGHGRP 59 Query 143 VRIRLTAGQAGDNPQLLPLLDDY---RHASTEYALGSTDFRLLADKAYSHPSTRAALRSK 199 + + + GQAGD+P +L+ R A + + R ADKAYS + R LRSK Sbjct 60 LSVLVGPGQAGDSPMFAHVLEGICVPRLAGGAHRTRPVEVR--ADKAYSSRANRELLRSK 117 Query 200 KIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKY 259 IK IPE+ DQ R KG AGGRPP FD Y RN VER F++ KQWR +ATRYDK Sbjct 118 GIKAVIPEKTDQAANRVNKGRAGGRPPNFDPESYKGRNVVERAFNKAKQWRAVATRYDKL 177 Query 260 ALTYLGGVLLACAVIHARVGTPKLGDTP 287 ALTY G LLA V ++ LGD P Sbjct 178 ALTYRAGFLLAGIVEWLKL----LGDMP 201 >gi|256379463|ref|YP_003103123.1| transposase IS4 family protein [Actinosynnema mirum DSM 43827] gi|255923766|gb|ACU39277.1| transposase IS4 family protein [Actinosynnema mirum DSM 43827] Length=365 Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/163 (53%), Positives = 110/163 (68%), Gaps = 6/163 (3%) Query 120 AIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYALGSTDF 179 A GR+ G LTTK+H D P+ + LT GQAGDNPQ LPLLD+ + + + Sbjct 7 ASGRT-GTLTTKLHPAVDSAGLPLAVILTPGQAGDNPQRLPLLDNIHDIDIDIDVDADGQ 65 Query 180 RL-----LADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYG 234 R+ +ADKA++HPSTRAALR ++IK T+PE D+IDRR A GSAGGRPP FD LY Sbjct 66 RVRVERAIADKAHAHPSTRAALRQRRIKATLPEHVDRIDRRSANGSAGGRPPTFDPDLYN 125 Query 235 LRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHAR 277 LRN VER F+RLKQ+RG+ATR+ K A + ++LA V+H R Sbjct 126 LRNVVERCFNRLKQFRGLATRFAKRAAYHRAEIVLASIVLHLR 168 >gi|315063828|gb|ADT78167.1| transposase [Rhodococcus sp. NCIMB 12038] Length=201 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 96/208 (47%), Positives = 115/208 (56%), Gaps = 12/208 (5%) Query 83 IPRTCGHTSIRRAPARTRSPQGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAP 142 IP+ G S R P T QG L +Y DEP DH IGRSRGGLT+K H D P Sbjct 3 IPQWSGSISTARTPPAT---QGDLPNYTNLGDEPADHGIGRSRGGLTSKAHLACDGHGRP 59 Query 143 VRIRLTAGQAGDNPQLLPLLDDY---RHASTEYALGSTDFRLLADKAYSHPSTRAALRSK 199 + + + GQAGD+P +L+ R A + + R ADKAYS + R L S+ Sbjct 60 LSVLVGPGQAGDSPMFAHVLEGICVPRLAGGAHRTRPDEVR--ADKAYSSRANRELLHSR 117 Query 200 KIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKY 259 IK IPE+ DQ R KG AGGRPP FD Y RN VER F++ KQWR +ATRYDK Sbjct 118 GIKAVIPEKTDQAANRVNKGRAGGRPPNFDPESYKGRNVVERAFNKAKQWRAVATRYDKL 177 Query 260 ALTYLGGVLLACAVIHARVGTPKLGDTP 287 ALTY G LLA V ++ LGD P Sbjct 178 ALTYRAGFLLAGIVEWLKL----LGDMP 201 >gi|296119137|ref|ZP_06837708.1| transposase, IS4 family [Corynebacterium ammoniagenes DSM 20306] gi|295967858|gb|EFG81112.1| transposase, IS4 family [Corynebacterium ammoniagenes DSM 20306] Length=192 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 85/157 (55%), Positives = 104/157 (67%), Gaps = 1/157 (0%) Query 115 EPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEYAL 174 EPD+HA+GRSRGG +TKIH D V LTAGQAGD+PQL +LD R A Sbjct 26 EPDNHALGRSRGGFSTKIHLACDHHLQAVSFTLTAGQAGDSPQLTEVLDRIRVARPGPGR 85 Query 175 -GSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAALY 233 S R+LADKAYS + R+ LR +KI TIP ++DQ D R+AKGSAGGRPPAFD+ Y Sbjct 86 PRSLPDRVLADKAYSSQANRSYLRCRKITTTIPVKKDQADNRQAKGSAGGRPPAFDSEAY 145 Query 234 GLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLA 270 RN VER F+ LK RG+ATRYDK A+ + + +A Sbjct 146 KGRNVVERCFNALKHNRGVATRYDKLAIRFEAVIRVA 182 >gi|257069701|ref|YP_003155956.1| transposase [Brachybacterium faecium DSM 4810] gi|256560519|gb|ACU86366.1| transposase [Brachybacterium faecium DSM 4810] Length=303 Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 91/181 (51%), Positives = 110/181 (61%), Gaps = 7/181 (3%) Query 98 RTRSPQGALSDYKK-SADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNP 156 R P GA +++ S +EPD HAIGRSRGGL +KIHA D P+ I LT GQ D Sbjct 121 RPDQPTGATANHNNLSPEEPDGHAIGRSRGGLGSKIHAAVDGNGMPLAIVLTGGQRHDGA 180 Query 157 QLLPLLDDYRHASTEYALGSTDFR---LLADKAYSHPSTRAALRSKKIKHTIPERQDQID 213 LL +LDD R G R ++AD+AYS TR L ++ IK IP++ D+I Sbjct 181 MLLEVLDDIR--VPRLGPGRPRIRPDAVVADRAYSSGKTRRMLAARGIKTVIPQKSDEIA 238 Query 214 RRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAV 273 RK KG+ GGRPPA D Y RN VER F KQWRGIATRYDK+A+ Y GV+L CAV Sbjct 239 SRKKKGTRGGRPPALDQVAYAGRNVVERQFGLAKQWRGIATRYDKHAIAYRAGVVL-CAV 297 Query 274 I 274 I Sbjct 298 I 298 >gi|257067256|ref|YP_003153511.1| transposase [Brachybacterium faecium DSM 4810] gi|257067717|ref|YP_003153972.1| transposase [Brachybacterium faecium DSM 4810] gi|256558074|gb|ACU83921.1| transposase [Brachybacterium faecium DSM 4810] gi|256558535|gb|ACU84382.1| transposase [Brachybacterium faecium DSM 4810] Length=303 Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 91/181 (51%), Positives = 110/181 (61%), Gaps = 7/181 (3%) Query 98 RTRSPQGALSDYKK-SADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNP 156 R P GA +++ S +EPD HAIGRSRGGL +KIHA D P+ I LT GQ D Sbjct 121 RPDQPTGATANHNNLSPEEPDGHAIGRSRGGLGSKIHAAVDGNGMPLAIVLTGGQRHDGA 180 Query 157 QLLPLLDDYRHASTEYALGSTDFR---LLADKAYSHPSTRAALRSKKIKHTIPERQDQID 213 LL +LDD R G R ++AD+AYS TR L ++ IK IP++ D+I Sbjct 181 MLLEVLDDIR--VPRLGPGRPRIRPDAVVADRAYSSGKTRRMLAARGIKTVIPQKSDEIA 238 Query 214 RRKAKGSAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAV 273 RK KG+ GGRPPA D Y RN VER F KQWRGIATRYDK+A+ Y GV+L CAV Sbjct 239 SRKKKGTRGGRPPALDQVAYAGRNVVERQFGLAKQWRGIATRYDKHAIAYRAGVVL-CAV 297 Query 274 I 274 I Sbjct 298 I 298 >gi|226349344|ref|YP_002776458.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] gi|226349372|ref|YP_002776486.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] gi|226245259|dbj|BAH55606.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] gi|226245287|dbj|BAH55634.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] Length=189 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/188 (48%), Positives = 108/188 (58%), Gaps = 9/188 (4%) Query 103 QGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLL 162 QG L +Y DEP DH IGRSRGGLT+K H D P+ + + GQAGD+P +L Sbjct 8 QGDLPNYTNLGDEPADHGIGRSRGGLTSKAHLACDGHGRPLSVLVGPGQAGDSPMFAHVL 67 Query 163 DDY---RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG 219 + R A + + R ADKAYS + R LRS+ IK IPE+ DQ R KG Sbjct 68 EGICVPRLAGGAHRTRPDEVR--ADKAYSSRANRELLRSRGIKAVIPEKTDQAANRVNKG 125 Query 220 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG 279 AGGRPP FD Y RN VER F++ KQWR +ATRYDK ALTY G LLA V ++ Sbjct 126 RAGGRPPNFDPESYKGRNVVERAFNKAKQWRAVATRYDKLALTYRAGFLLAGIVEWLKL- 184 Query 280 TPKLGDTP 287 LGD P Sbjct 185 ---LGDMP 189 >gi|226349579|ref|YP_002776693.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] gi|226245494|dbj|BAH55841.1| putative transposase orfB for insertion sequence element [Rhodococcus opacus B4] Length=189 Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 90/188 (48%), Positives = 108/188 (58%), Gaps = 9/188 (4%) Query 103 QGALSDYKKSADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLL 162 QG L +Y DEP DH IGRSRGGLT+K H D P+ + + GQAGD+P +L Sbjct 8 QGDLPNYTNLRDEPADHGIGRSRGGLTSKAHLACDGHGRPLSVLVGPGQAGDSPMFAHVL 67 Query 163 DDY---RHASTEYALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKG 219 + R A + + R ADKAYS + R LRS+ IK IPE+ DQ R KG Sbjct 68 EGICVPRLAGGAHRTRPVEVR--ADKAYSSRANRELLRSRGIKAVIPEKTDQAANRVNKG 125 Query 220 SAGGRPPAFDAALYGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVIHARVG 279 AGGRPP FD Y RN VER F++ KQWR +ATRYDK ALTY G LLA V ++ Sbjct 126 RAGGRPPNFDPESYKGRNVVERAFNKAKQWRAVATRYDKLALTYRAGFLLAGIVEWLKL- 184 Query 280 TPKLGDTP 287 LGD P Sbjct 185 ---LGDMP 189 >gi|291445408|ref|ZP_06584798.1| LOW QUALITY PROTEIN: transposase [Streptomyces roseosporus NRRL 15998] gi|291446402|ref|ZP_06585792.1| LOW QUALITY PROTEIN: transposase [Streptomyces roseosporus NRRL 15998] gi|291447451|ref|ZP_06586841.1| LOW QUALITY PROTEIN: transposase [Streptomyces roseosporus NRRL 15998] 7 more sequence titles Length=220 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/162 (52%), Positives = 99/162 (62%), Gaps = 0/162 (0%) Query 113 ADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEY 172 ADEPD HA+GRSRGGLTTKIH D R P+ LT GQAGD P ++ R Sbjct 55 ADEPDHHALGRSRGGLTTKIHLAADSRCRPLAFVLTPGQAGDAPAFTQVMARLRVPRPTG 114 Query 173 ALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAAL 232 +T +LADKAYS + RA LR + ++ IP+ DQ RK +GS GGRPPAFD Sbjct 115 RPRTTPEVVLADKAYSSRAIRAHLRRRGVRAVIPQPADQAANRKRRGSHGGRPPAFDRDA 174 Query 233 YGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI 274 Y RNTVER ++LKQWRG+ATRYDK A Y + LA I Sbjct 175 YKQRNTVERCINKLKQWRGLATRYDKTATIYQAALHLAGIFI 216 >gi|291443598|ref|ZP_06582988.1| LOW QUALITY PROTEIN: transposase [Streptomyces roseosporus NRRL 15998] gi|291346545|gb|EFE73449.1| LOW QUALITY PROTEIN: transposase [Streptomyces roseosporus NRRL 15998] Length=220 Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 83/162 (52%), Positives = 99/162 (62%), Gaps = 0/162 (0%) Query 113 ADEPDDHAIGRSRGGLTTKIHALTDQREAPVRIRLTAGQAGDNPQLLPLLDDYRHASTEY 172 ADEPD HA+GRSRGGLTTKIH D R P+ LT GQAGD P ++ R Sbjct 55 ADEPDHHALGRSRGGLTTKIHLAADSRCRPLAFVLTPGQAGDAPAFTQVMARLRVPRPTG 114 Query 173 ALGSTDFRLLADKAYSHPSTRAALRSKKIKHTIPERQDQIDRRKAKGSAGGRPPAFDAAL 232 +T +LADKAYS + RA LR + ++ IP+ DQ RK +GS GGRPPAFD Sbjct 115 RPRTTPEVVLADKAYSSRAIRAHLRRRGVRAVIPQPADQAANRKRRGSHGGRPPAFDRDA 174 Query 233 YGLRNTVERGFHRLKQWRGIATRYDKYALTYLGGVLLACAVI 274 Y RNTVER ++LKQWRG+ATRYDK A Y + LA I Sbjct 175 YKQRNTVERCINKLKQWRGLATRYDKTATIYQAALHLAGIFI 216 Lambda K H 0.320 0.135 0.430 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 464609342096 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40