BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1044
Length=207
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608184|ref|NP_215560.1| hypothetical protein Rv1044 [Mycoba... 408 2e-112
gi|254231334|ref|ZP_04924661.1| conserved hypothetical protein [... 380 7e-104
gi|323720501|gb|EGB29584.1| hypothetical protein TMMG_03043 [Myc... 280 1e-73
gi|226228973|ref|YP_002763079.1| hypothetical protein GAU_3567 [... 127 1e-27
gi|108763571|ref|YP_635529.1| hypothetical protein MXAN_7423 [My... 114 9e-24
gi|257792779|ref|YP_003183385.1| hypothetical protein Elen_3053 ... 110 1e-22
gi|256826059|ref|YP_003150019.1| hypothetical protein Ksed_22770... 100 2e-19
gi|258592715|emb|CBE69024.1| conserved protein of unknown functi... 95.9 3e-18
gi|168702703|ref|ZP_02734980.1| hypothetical protein GobsU_24461... 95.9 3e-18
gi|86159701|ref|YP_466486.1| hypothetical protein Adeh_3281 [Ana... 91.3 8e-17
gi|336117543|ref|YP_004572311.1| hypothetical protein MLP_18940 ... 89.7 2e-16
gi|338731785|ref|YP_004662904.1| hypothetical protein SNE_B24090... 88.6 5e-16
gi|338732235|ref|YP_004670708.1| hypothetical protein SNE_A03400... 88.2 8e-16
gi|153003938|ref|YP_001378263.1| hypothetical protein Anae109_10... 87.4 1e-15
gi|315657244|ref|ZP_07910126.1| conserved hypothetical protein [... 80.1 2e-13
gi|304391158|ref|ZP_07373108.1| conserved hypothetical protein [... 80.1 2e-13
gi|226350076|ref|YP_002777189.1| hypothetical protein ROP_pROB02... 79.7 2e-13
gi|118464483|ref|YP_884145.1| hypothetical protein MAV_5025 [Myc... 77.8 8e-13
gi|298346249|ref|YP_003718936.1| hypothetical protein HMPREF0573... 77.4 1e-12
gi|302560829|ref|ZP_07313171.1| conserved hypothetical protein [... 75.1 6e-12
gi|256826042|ref|YP_003150002.1| hypothetical protein Ksed_22570... 74.3 1e-11
gi|323356685|ref|YP_004223081.1| transcriptional regulator [Micr... 72.4 4e-11
gi|111025003|ref|YP_707423.1| hypothetical protein RHA1_ro08220 ... 72.0 4e-11
gi|269955262|ref|YP_003325051.1| hypothetical protein Xcel_0454 ... 72.0 5e-11
gi|269216410|ref|ZP_06160264.1| conserved hypothetical protein [... 71.2 8e-11
gi|77454597|ref|YP_345465.1| hypothetical protein pREL1_0030 [Rh... 70.5 1e-10
gi|302335265|ref|YP_003800472.1| hypothetical protein Olsu_0476 ... 70.1 2e-10
gi|257063017|ref|YP_003142689.1| hypothetical protein Shel_02720... 68.6 5e-10
gi|330824421|ref|YP_004387724.1| hypothetical protein Alide2_182... 67.4 1e-09
gi|121583145|ref|YP_973586.1| hypothetical protein Pnap_4574 [Po... 67.0 2e-09
gi|229492910|ref|ZP_04386706.1| conserved hypothetical protein [... 66.6 2e-09
gi|288870936|ref|ZP_06115821.2| putative abortive infection prot... 65.5 4e-09
gi|229490185|ref|ZP_04384032.1| conserved hypothetical protein [... 63.5 2e-08
gi|54027175|ref|YP_121417.1| hypothetical protein nfa52010 [Noca... 63.5 2e-08
gi|326329796|ref|ZP_08196116.1| hypothetical protein NBCG_01229 ... 63.5 2e-08
gi|38234629|ref|NP_940396.1| hypothetical protein DIP2072 [Coryn... 63.2 2e-08
gi|226305084|ref|YP_002765042.1| hypothetical protein RER_15950 ... 62.8 3e-08
gi|306836851|ref|ZP_07469808.1| conserved hypothetical protein [... 62.8 3e-08
gi|307701536|ref|ZP_07638553.1| conserved hypothetical protein [... 62.4 4e-08
gi|260904062|ref|ZP_05912384.1| hypothetical protein BlinB_01937... 62.0 6e-08
gi|284043174|ref|YP_003393514.1| hypothetical protein Cwoe_1712 ... 62.0 6e-08
gi|284043023|ref|YP_003393363.1| hypothetical protein Cwoe_1560 ... 61.6 8e-08
gi|336392544|ref|ZP_08573943.1| hypothetical protein LcortK3_072... 61.2 8e-08
gi|284042969|ref|YP_003393309.1| hypothetical protein Cwoe_1506 ... 61.2 1e-07
gi|312141139|ref|YP_004008475.1| hypothetical protein REQ_38080 ... 60.8 1e-07
gi|306817767|ref|ZP_07451508.1| possible transcriptional regulat... 60.5 1e-07
gi|292493714|ref|YP_003529153.1| hypothetical protein Nhal_3750 ... 60.5 1e-07
gi|308179912|ref|YP_003924040.1| putative abortive infection pro... 60.5 1e-07
gi|269977805|ref|ZP_06184762.1| putative abortive Infection Prot... 60.5 2e-07
gi|257885893|ref|ZP_05665546.1| abortive infection protein AbiGI... 60.5 2e-07
>gi|15608184|ref|NP_215560.1| hypothetical protein Rv1044 [Mycobacterium tuberculosis H37Rv]
gi|15840474|ref|NP_335511.1| hypothetical protein MT1074 [Mycobacterium tuberculosis CDC1551]
gi|31792235|ref|NP_854728.1| hypothetical protein Mb1073 [Mycobacterium bovis AF2122/97]
49 more sequence titles
Length=207
Score = 408 bits (1049), Expect = 2e-112, Method: Compositional matrix adjust.
Identities = 206/207 (99%), Positives = 207/207 (100%), Gaps = 0/207 (0%)
Query 1 LCAKPYLIDTIAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGR 60
+CAKPYLIDTIAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGR
Sbjct 1 MCAKPYLIDTIAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGR 60
Query 61 GVYRVPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRA 120
GVYRVPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRA
Sbjct 61 GVYRVPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRA 120
Query 121 AGGELYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLR 180
AGGELYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLR
Sbjct 121 AGGELYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLR 180
Query 181 RGSAAELRAALDETTAGLRARPKRASA 207
RGSAAELRAALDETTAGLRARPKRASA
Sbjct 181 RGSAAELRAALDETTAGLRARPKRASA 207
>gi|254231334|ref|ZP_04924661.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|308231711|ref|ZP_07663914.1| hypothetical protein TMAG_00987 [Mycobacterium tuberculosis SUMu001]
gi|308370590|ref|ZP_07666973.1| hypothetical protein TMCG_00663 [Mycobacterium tuberculosis SUMu003]
21 more sequence titles
Length=194
Score = 380 bits (976), Expect = 7e-104, Method: Compositional matrix adjust.
Identities = 194/194 (100%), Positives = 194/194 (100%), Gaps = 0/194 (0%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH
Sbjct 1 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 60
Query 74 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL 133
DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL
Sbjct 61 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL 120
Query 134 QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAALDE 193
QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAALDE
Sbjct 121 QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAALDE 180
Query 194 TTAGLRARPKRASA 207
TTAGLRARPKRASA
Sbjct 181 TTAGLRARPKRASA 194
>gi|323720501|gb|EGB29584.1| hypothetical protein TMMG_03043 [Mycobacterium tuberculosis CDC1551A]
gi|339294044|gb|AEJ46155.1| hypothetical protein CCDC5079_0965 [Mycobacterium tuberculosis
CCDC5079]
gi|339297684|gb|AEJ49794.1| hypothetical protein CCDC5180_0957 [Mycobacterium tuberculosis
CCDC5180]
Length=143
Score = 280 bits (715), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 142/143 (99%), Positives = 143/143 (100%), Gaps = 0/143 (0%)
Query 65 VPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGE 124
+PVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGE
Sbjct 1 MPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGE 60
Query 125 LYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSA 184
LYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSA
Sbjct 61 LYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSA 120
Query 185 AELRAALDETTAGLRARPKRASA 207
AELRAALDETTAGLRARPKRASA
Sbjct 121 AELRAALDETTAGLRARPKRASA 143
>gi|226228973|ref|YP_002763079.1| hypothetical protein GAU_3567 [Gemmatimonas aurantiaca T-27]
gi|226092164|dbj|BAH40609.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length=194
Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/190 (41%), Positives = 110/190 (58%), Gaps = 5/190 (2%)
Query 15 AIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHD 74
A + L ++A +Q GYVTT A +GV + L ++ RG LERV RGVYR+ P
Sbjct 4 ATYRALYDIAEDQMGYVTTGQAGTVGVSAMALVMMTRRGTLERVSRGVYRLIDFPVQPLA 63
Query 75 DLAAAVSWTLGR-GVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL 133
A W GR GV+SHE+AL+LH L+ V+P+++H+TVP + + A VHR DL
Sbjct 64 QYMQATLWPHGRRGVLSHETALSLHELSGVDPAKVHITVPADFRVQRAVPSYLIVHRGDL 123
Query 134 QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAA----ELRA 189
+ VT +DG+P+TT ARTI+DC++ P + AI++A G + +A+ ELR
Sbjct 124 TSEDVTRIDGMPITTPARTIRDCIQVHLGPALITEAIKQARTSGLVNAPTASVLERELRI 183
Query 190 ALDETTAGLR 199
A AG R
Sbjct 184 ASGALGAGAR 193
>gi|108763571|ref|YP_635529.1| hypothetical protein MXAN_7423 [Myxococcus xanthus DK 1622]
gi|108467451|gb|ABF92636.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
Length=189
Score = 114 bits (285), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/177 (39%), Positives = 94/177 (54%), Gaps = 5/177 (2%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
WDRL ++ A Q G T + A + G P L G GR RV RG+YR+ P GEH+DL
Sbjct 11 WDRLFDIVAGQSGLFTAQQALEAGYSPQVLAHHVGAGRFHRVRRGIYRLVHFPAGEHEDL 70
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVP---RNNHPRAAGGELYRVHRRDL 133
A W+ +GV SH++ALALH L+DV PSR+HLT+P R RA G + +H D+
Sbjct 71 VAVWLWSEQQGVFSHQTALALHNLSDVLPSRMHLTLPAAWRQRRFRAPAGTV--LHHADV 128
Query 134 QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAA 190
IP T+ RT+ DC P L AI +A + G + A +++A
Sbjct 129 GETERVWFGPIPGTSPRRTLLDCAAAQVSPDLLNQAIAQALSRGLILTSDLAGIQSA 185
>gi|257792779|ref|YP_003183385.1| hypothetical protein Elen_3053 [Eggerthella lenta DSM 2243]
gi|257476676|gb|ACV56996.1| conserved hypothetical protein [Eggerthella lenta DSM 2243]
Length=196
Score = 110 bits (275), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/175 (40%), Positives = 91/175 (52%), Gaps = 1/175 (0%)
Query 18 DRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLA 77
DRL EVA +Q+G+VTT A + GV L +L RGRLERV R VYRVP +P D
Sbjct 9 DRLREVALDQYGFVTTAQAEEAGVSAPSLAMLVKRGRLERVVRSVYRVPQVPPSSFDRFM 68
Query 78 AAVSWT-LGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAA 136
A+ WT +SHE+AL + + DVNP+ IH+ V R GGE Y +H + A
Sbjct 69 LALLWTGCDEAALSHETALDAYDVCDVNPTSIHVVVDGGRRIRRKGGEGYAIHYETVDAK 128
Query 137 HVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAAL 191
V +G+ +A I+ C TGT Y L A+E G L + A A +
Sbjct 129 QVGWWEGMRCVKLATAIEQCAATGTPRYLLEQAVENGRKRGLLGKREAERFEATV 183
>gi|256826059|ref|YP_003150019.1| hypothetical protein Ksed_22770 [Kytococcus sedentarius DSM 20547]
gi|256689452|gb|ACV07254.1| hypothetical protein Ksed_22770 [Kytococcus sedentarius DSM 20547]
Length=303
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/166 (41%), Positives = 85/166 (52%), Gaps = 18/166 (10%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
LVE+ EQ G VTT AR+ GV PV L+ L G + R+ RGVY +P P G +L AA
Sbjct 10 LVELGTEQDGLVTTARAREFGVTPVDLKRLTDTGHVTRLRRGVYALPSAPPGPLQELRAA 69
Query 80 VSWTLGRG---------VISHESALALHALADVNPSRIHLTVPRNN---HPRAAGGELYR 127
GR V+SH SA A+H+L D+ P + T PR HP
Sbjct 70 WLEASGRDRSGAEPPDTVVSHVSAAAMHSLGDLIPQKHEFTSPRRRQTIHPDVT------ 123
Query 128 VHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERA 173
HR L A T V+G+PVTTVART++D T TD A ++ A
Sbjct 124 FHRSGLSPAECTMVNGLPVTTVARTLEDLAATTTDFDHFSAMVKDA 169
>gi|258592715|emb|CBE69024.1| conserved protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length=202
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/160 (39%), Positives = 83/160 (52%), Gaps = 4/160 (2%)
Query 19 RLVEVAAEQHGYVTTRDARDIGVDPVQLRLL-AGRGRLERVGRGVYRVPVLPRGEHDDLA 77
RL E A Q GY T AR G P QL+ RG R RG++R+ PR H+DL
Sbjct 13 RLYEYAVAQGGYFTAAQARIAGY-PKQLQYYHVRRGNWVREDRGIFRLWEWPRSSHEDLI 71
Query 78 AAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAAH 137
W+ G V+SH+SA+A+H ++D+ P++IHLTVP R +HR L
Sbjct 72 RWTLWSRGAAVVSHQSAMAVHEISDLMPAKIHLTVPPEF--RKTPSPAMVLHRDRLAPHE 129
Query 138 VTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEG 177
+ DG VTT RT+ D + DP +L AA+ A +G
Sbjct 130 IEQRDGFRVTTPLRTLIDAARVDVDPERLSAAVRDAVLKG 169
>gi|168702703|ref|ZP_02734980.1| hypothetical protein GobsU_24461 [Gemmata obscuriglobus UQM 2246]
Length=204
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/173 (36%), Positives = 86/173 (50%), Gaps = 9/173 (5%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L +A EQ GY TT+ A++ G L G ERV G+YR+P +PR EHD+L
Sbjct 12 LAALAHEQGGYFTTKQAKEAGYGYNHLDYHETAGNFERVDHGLYRIPAVPRDEHDELIRL 71
Query 80 VSWTLG-----RGVISHESALALHALADVNPSRIHLTVPRN-NHPRAAGGELYRVHRRDL 133
W+ + V+SH+SAL LH + D+ P RIHLTVPR P G L H+ +
Sbjct 72 SLWSRNQKDEPQAVVSHDSALVLHEMTDLLPDRIHLTVPRTFRKPTPTGCVL---HKAVI 128
Query 134 QAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAE 186
V G VT+ RT+ D ++ +L A+ A G +RR ++
Sbjct 129 AEGDVEERTGFRVTSPFRTLLDSAQSEVSQEELEKAVANALTRGLVRRTKLSQ 181
>gi|86159701|ref|YP_466486.1| hypothetical protein Adeh_3281 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776212|gb|ABC83049.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length=192
Score = 91.3 bits (225), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/192 (37%), Positives = 96/192 (50%), Gaps = 16/192 (8%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
WD+L A+ Q G TT A + G L+ GR+ RV RG+YR+ P GEH++L
Sbjct 10 WDKLFATASGQDGLFTTEQAAEAGYYHQLLKRYVEFGRVRRVRRGIYRLVHYPAGEHEEL 69
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVP------RNNHPRAAGGELYRVHR 130
A W+ GV SHE+AL+L+ L+DV P R+HLTVP R PR +H
Sbjct 70 AEIWLWSKQAGVFSHETALSLYELSDVLPKRVHLTVPADWRRRRLKVPRGV-----VLHH 124
Query 131 RDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAA 190
++A + +PVT RT+ DC T P L A ++A + G + AE+ A
Sbjct 125 ATVRADERSWFGAVPVTEPGRTLLDCAMTHLSPELLAQAFQQARSRGLVSPDGLAEISQA 184
Query 191 LDETTAGLRARP 202
AGLR P
Sbjct 185 -----AGLREVP 191
>gi|336117543|ref|YP_004572311.1| hypothetical protein MLP_18940 [Microlunatus phosphovorus NM-1]
gi|334685323|dbj|BAK34908.1| hypothetical protein MLP_18940 [Microlunatus phosphovorus NM-1]
Length=184
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/144 (41%), Positives = 83/144 (58%), Gaps = 5/144 (3%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPV--LPRGEHDDLA 77
L E+A + +G VTT A + GV V LR +A RG L R+G G+YR P+ + D A
Sbjct 7 LRELALDNYGLVTTWQASEAGVPAVMLRQIAARGGLVRLGHGLYRFPLSEIRPTFFDPFA 66
Query 78 AAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYR-VHRRDLQAA 136
AV+ ++H++ LALH L VNP RI + PR RA G++ + VH+ L AA
Sbjct 67 EAVARVGRDAYLTHDAVLALHGLGLVNPQRIRVGTPRRV--RADVGDMVQIVHQPTLSAA 124
Query 137 HVTSVDGIPVTTVARTIKDCVKTG 160
+T +GIP TTVA+ + DC + G
Sbjct 125 ALTVYEGIPSTTVAQALADCARAG 148
>gi|338731785|ref|YP_004662904.1| hypothetical protein SNE_B24090 [Simkania negevensis Z]
gi|336481168|emb|CCB87768.1| putative uncharacterized protein [Simkania negevensis Z]
Length=203
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/147 (35%), Positives = 74/147 (51%), Gaps = 11/147 (7%)
Query 19 RLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAA 78
+L E+A+ Q GY T A+ G + +G + GRG+YR+ P GE DL
Sbjct 9 KLYEIASLQQGYFTAYQAKQAGYSDSRFAYHVKKGNWIKEGRGIYRLANYPTGERPDLVF 68
Query 79 AVSWTLGR-----GVISHESALALHALADVNPSRIHLTVP---RNNHPRAAGGELYRVHR 130
W+ R GV SH++ALA+H L+DV P++ ++TVP R HP LY
Sbjct 69 WSLWSANRQGKVQGVFSHQTALAIHELSDVMPAKYYMTVPKGFRKYHPYPENLVLYFA-- 126
Query 131 RDLQAAHVTSVDGIPVTTVARTIKDCV 157
+L + +G VT+ RTI+D +
Sbjct 127 -NLSEEEIWEFEGYRVTSPKRTIQDIL 152
>gi|338732235|ref|YP_004670708.1| hypothetical protein SNE_A03400 [Simkania negevensis Z]
gi|336481618|emb|CCB88217.1| putative uncharacterized protein [Simkania negevensis Z]
Length=204
Score = 88.2 bits (217), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/149 (31%), Positives = 78/149 (53%), Gaps = 13/149 (8%)
Query 18 DRLVEVAAEQHGYVTTRDARDIGVD----PVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
++L E+A Q G+ T++ A+ G P +R G RV RG+YR+ P +
Sbjct 10 NKLFEIAESQQGFFTSKQAKASGYKDNTHPYHVR----SGHWIRVHRGIYRLAKFPESKR 65
Query 74 DDLAAAVSWTLGR-----GVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRV 128
DL W+ R GV SH++AL++H +D+ P ++H+TVP + +A ++ +
Sbjct 66 PDLMIWALWSCNRSGKIEGVYSHQTALSIHEFSDILPDKLHMTVPLSFRRNSATPKILII 125
Query 129 HRRDLQAAHVTSVDGIPVTTVARTIKDCV 157
HR+ L + +DG VTT +T+ D +
Sbjct 126 HRKQLNQDQIVLMDGYFVTTPYQTLLDVI 154
>gi|153003938|ref|YP_001378263.1| hypothetical protein Anae109_1071 [Anaeromyxobacter sp. Fw109-5]
gi|152027511|gb|ABS25279.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
Length=192
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/192 (36%), Positives = 95/192 (50%), Gaps = 16/192 (8%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
WD+L A+ Q G TT A + G L+ GR+ RV RG+YR+ P G+H++L
Sbjct 10 WDKLFATASGQDGLFTTEQAAEAGYYHQLLKRYVEFGRVRRVRRGIYRLVHYPAGDHEEL 69
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVP------RNNHPRAAGGELYRVHR 130
A W+ GV SHE+AL+LH L+DV P R+HLTVP R PR +H
Sbjct 70 AEVWLWSKQAGVFSHETALSLHGLSDVLPKRLHLTVPADWRGRRLKIPRGV-----VLHP 124
Query 131 RDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAA 190
++A + +PVT RT+ DC P L A ++A + G + AE+ A
Sbjct 125 ATVRADERSWFGAVPVTEPGRTLLDCAMAHLSPELLAQAFQQARSRGLVSPERLAEVSRA 184
Query 191 LDETTAGLRARP 202
AGLR P
Sbjct 185 -----AGLREVP 191
>gi|315657244|ref|ZP_07910126.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491716|gb|EFU81325.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length=185
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (36%), Positives = 82/167 (50%), Gaps = 1/167 (0%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M+ D L E+A +QHG+VT A GV L + RGR+ R+ RGVYRVP + +
Sbjct 1 MSGLDDLREIALDQHGFVTRGQAIAAGVTDADLSKMVSRGRIGRLVRGVYRVPGVAQTPW 60
Query 74 DDLAAAVSWT-LGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRD 132
D V WT R +SHE+AL + + + P H+TV R R + GE + VH +D
Sbjct 61 DAYHLPVLWTGETRACLSHETALEVWEVTESLPEVKHVTVGRGRRVRRSDGEGFVVHYQD 120
Query 133 LQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTL 179
L+ G+PV V+ + CV G L+ A E G L
Sbjct 121 LEPRERAWCQGLPVVVVSTALVQCVDYGVSTRVLKRAGELGLQRGLL 167
>gi|304391158|ref|ZP_07373108.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304325593|gb|EFL92841.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length=185
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (36%), Positives = 82/167 (50%), Gaps = 1/167 (0%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M+ D L E+A +QHG+VT A GV L + RGR+ R+ RGVYRVP + +
Sbjct 1 MSRLDDLREIALDQHGFVTRGQAIAAGVTDADLSKMVSRGRIGRLVRGVYRVPGVAQTPW 60
Query 74 DDLAAAVSWT-LGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRD 132
D V WT R +SHE+AL + + + P H+TV R R + GE + VH +D
Sbjct 61 DAYHLPVLWTGETRACLSHETALEVWEVTESLPEVKHVTVGRGRRVRRSDGEGFVVHYQD 120
Query 133 LQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTL 179
L+ G+PV V+ + CV G L+ A E G L
Sbjct 121 LEPRERAWCQGLPVVVVSTALIQCVDYGVSTRVLKRAGELGLQRGLL 167
>gi|226350076|ref|YP_002777189.1| hypothetical protein ROP_pROB02-02450 [Rhodococcus opacus B4]
gi|226245988|dbj|BAH47252.1| hypothetical protein [Rhodococcus opacus B4]
Length=401
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/156 (38%), Positives = 74/156 (48%), Gaps = 16/156 (10%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
+ E AEQ G +T+ AR +GV VQ++ LA RG LERV G+YR+ LP DL A
Sbjct 10 VAEFGAEQWGLITSAQARMLGVTAVQMKRLADRGALERVHHGIYRMTRLPYDPRQDLRVA 69
Query 80 -------------VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELY 126
+S GV+SH SA LH + D++ LT R R
Sbjct 70 WVALDLHTPAWERLSQPFPGGVVSHRSAAHLHEVGDLDADLTELTCRRRIRLRLPD---I 126
Query 127 RVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTD 162
R+H + T VDG+PVTT RTI D G D
Sbjct 127 RIHTGTVAVDDWTVVDGLPVTTARRTIADLAAEGID 162
>gi|118464483|ref|YP_884145.1| hypothetical protein MAV_5025 [Mycobacterium avium 104]
gi|254777455|ref|ZP_05218971.1| hypothetical protein MaviaA2_22691 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165770|gb|ABK66667.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=198
Score = 77.8 bits (190), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/177 (33%), Positives = 81/177 (46%), Gaps = 9/177 (5%)
Query 21 VEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAV 80
+A+EQ GY T A+ +G G R+ RG++R+ HDDL
Sbjct 13 FNLASEQAGYFTAAQAKAVGYSYQAHAYHVAAGNWLRIERGLFRLAEWIPDVHDDLVRWS 72
Query 81 SWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAAHVTS 140
W+ GRGVISHE+ALA+H + + +R+ LTVP + + +H +L V
Sbjct 73 LWSRGRGVISHETALAVHGIGEFESARVQLTVPPDF---TMHDDAVVLHHAELDTDDVQD 129
Query 141 VDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLR------RGSAAELRAAL 191
G VTT R++ D T D QL A+ A G L R + + RAAL
Sbjct 130 GTGFRVTTPIRSLIDVAATAPDEDQLARAVADARQRGLLSIRSLRTRAESIDARAAL 186
>gi|298346249|ref|YP_003718936.1| hypothetical protein HMPREF0573_11123 [Mobiluncus curtisii ATCC
43063]
gi|298236310|gb|ADI67442.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
Length=185
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/167 (35%), Positives = 81/167 (49%), Gaps = 1/167 (0%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M+ D L E+A +QHG+VT A GV L + R R+ R+ RGVYRVP + +
Sbjct 1 MSGLDDLREIALDQHGFVTRGQAIAAGVTDADLSKMVSRDRIGRLVRGVYRVPGVAQTPW 60
Query 74 DDLAAAVSWT-LGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRD 132
D V WT R +SHE+AL + + + P H+TV R R + GE + VH +D
Sbjct 61 DAYHLPVLWTGETRACLSHETALEVWEVTESLPEVKHVTVGRGRRVRRSDGEGFVVHYQD 120
Query 133 LQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTL 179
L+ G+PV V+ + CV G L+ A E G L
Sbjct 121 LEPRERAWCQGLPVVVVSTALIQCVDYGVSTRVLKRAGELGLQRGLL 167
>gi|302560829|ref|ZP_07313171.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302478447|gb|EFL41540.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length=199
Score = 75.1 bits (183), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (35%), Positives = 78/166 (47%), Gaps = 8/166 (4%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRV---PVLPRGEHDDL 76
L AA Q GY T A + G R A G + R +YR LP GE D+
Sbjct 12 LWRTAAGQRGYFTAAQALEAGYSYQAQRYHAQHGNWLVIDRALYRFREFSDLP-GEGDEQ 70
Query 77 AAAVS-WTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQA 135
S W+ GR +SH +ALA+H L NPSRIHLTVPR ++ + +HR +L
Sbjct 71 LVRWSLWSRGRAAVSHATALAVHDLGTANPSRIHLTVPRGFRQKS---DAVILHRAELVD 127
Query 136 AHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRR 181
+ V G VT +R I +C G D + A+ A +G + R
Sbjct 128 SDVEDRAGYRVTVPSRAIAECAADGDDQDVIDGAVAEALEQGVVTR 173
>gi|256826042|ref|YP_003150002.1| hypothetical protein Ksed_22570 [Kytococcus sedentarius DSM 20547]
gi|256689435|gb|ACV07237.1| hypothetical protein Ksed_22570 [Kytococcus sedentarius DSM 20547]
Length=237
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/147 (38%), Positives = 71/147 (49%), Gaps = 16/147 (10%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L E+ E G VTT A GV P+ L+ L G + R+ RGVY +P P G +L AA
Sbjct 12 LAELGTENDGLVTTSRAGAFGVAPLDLKRLTDHGHVTRLRRGVYALPSAPNGPLQELRAA 71
Query 80 VSWTLGRG-----------VISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRV 128
W G V+SH SA A+H L +V P R T PR R + R
Sbjct 72 --WLEASGPDPWVGDPPDTVVSHLSAAAVHGLGEVIPHRHEFTSPRR---RQTVHDDVRF 126
Query 129 HRRDLQAAHVTSVDGIPVTTVARTIKD 155
HR L + T+ G+ VTTV RT++D
Sbjct 127 HRATLTPSEHTASQGLAVTTVPRTLED 153
>gi|323356685|ref|YP_004223081.1| transcriptional regulator [Microbacterium testaceum StLB037]
gi|323273056|dbj|BAJ73201.1| predicted transcriptional regulator [Microbacterium testaceum
StLB037]
Length=344
Score = 72.4 bits (176), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/189 (36%), Positives = 94/189 (50%), Gaps = 25/189 (13%)
Query 19 RLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVY--------RVPV--- 67
R+ E+AA Q G +TT A G+ +QL LA G +ER+ RG+Y R P+
Sbjct 9 RVSELAARQWGLLTTSQAEAEGITRLQLARLADAGVIERLDRGIYAASAAVDERTPLRAA 68
Query 68 LPRGEHDDLAAA-VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELY 126
E LA ++ GV+SH SA LH + D+ +T+P R
Sbjct 69 WLSLEPSKLAEERLADPASSGVLSHTSAATLHRVGDLLDDVPEITMPDRKQSRRG----I 124
Query 127 RVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEG-TLRRGSAA 185
R+HR L+A VT V+G+P TT ART+ D ++ G DP + AE G LRR A+
Sbjct 125 RLHRSALEAGDVTIVEGLPATTPARTVADLLRDGHDPSHV------AEIAGDALRRDLAS 178
Query 186 --ELRAALD 192
++ AALD
Sbjct 179 RQDMAAALD 187
>gi|111025003|ref|YP_707423.1| hypothetical protein RHA1_ro08220 [Rhodococcus jostii RHA1]
gi|110823982|gb|ABG99265.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length=321
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/189 (34%), Positives = 89/189 (48%), Gaps = 24/189 (12%)
Query 19 RLVEVAAEQHGYVTTRDARDI-GVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLA 77
++V +AAEQ G VT+R AR + V QL+ + G LER+ G+YR+ +P H L
Sbjct 9 QVVALAAEQGGVVTSRQARAVTSVSVQQLKRMVDSGVLERLHHGLYRLGRMPEDVH--LG 66
Query 78 AAVSWT---------------LGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAG 122
V+W + GV+SH +A ALH + D++ + LT R G
Sbjct 67 ERVAWLALDPDVVVWERLDQPVPTGVLSHRTAAALHGVGDLDADVVELTATRRIRLALPG 126
Query 123 GELYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRG 182
VHR L VDG+PVTT RTI D GTD L + + A G +
Sbjct 127 ---VIVHRGALSREDWQLVDGLPVTTPVRTIADLAAAGTDAGHLASVVRDALTRGLV--- 180
Query 183 SAAELRAAL 191
+ AE+ A L
Sbjct 181 TVAEVVAVL 189
>gi|269955262|ref|YP_003325051.1| hypothetical protein Xcel_0454 [Xylanimonas cellulosilytica DSM
15894]
gi|269303943|gb|ACZ29493.1| hypothetical protein Xcel_0454 [Xylanimonas cellulosilytica DSM
15894]
Length=180
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/102 (49%), Positives = 57/102 (56%), Gaps = 2/102 (1%)
Query 18 DRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLA 77
D + EVA + GYVTTR A GV V+L LA RG LE V G+YRVP +P D A
Sbjct 9 DIVREVALDHFGYVTTRAAAAAGVPAVELPKLAARGGLENVAYGLYRVPDIPPHPFDQFA 68
Query 78 AAVSWTLGRGVISH-ESALALHALADVNPSRIHLTVPRNNHP 118
A+ +G G H ES LAL LADVN RI + PR P
Sbjct 69 EAL-LRVGDGAYLHGESVLALLGLADVNARRIKVATPRRARP 109
>gi|269216410|ref|ZP_06160264.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
gi|269130669|gb|EEZ61747.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
Length=176
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/143 (37%), Positives = 72/143 (51%), Gaps = 4/143 (2%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M +D + E A + HG +T+ A ++GV +L A RGRLERVG G+YR+ E+
Sbjct 1 MTKFDDIYEEAVDSHGLITSARAAELGVTNNELVQYARRGRLERVGHGLYRLARRVPEEN 60
Query 74 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL 133
D A AV+ + ES +A+ LA NPSR+H+ VP R G + V R D
Sbjct 61 DPYALAVALAGPGAYLFGESVIAMLGLAPTNPSRLHVAVPGRIRRRLPDGLV--VERGD- 117
Query 134 QAAHVTSVDGIPVTTVARTIKDC 156
T+ DGI T I+ C
Sbjct 118 -GMGTTAYDGISSQTAEAAIRAC 139
>gi|77454597|ref|YP_345465.1| hypothetical protein pREL1_0030 [Rhodococcus erythropolis PR4]
gi|77019597|dbj|BAE45973.1| hypothetical protein RER_pREL1-00300 [Rhodococcus erythropolis
PR4]
Length=265
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/183 (34%), Positives = 84/183 (46%), Gaps = 17/183 (9%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHD----- 74
L ++A +Q G T+ A + GV L+ LA R L R+ GVYR+ P D
Sbjct 10 LADLAQDQWGMFTSAQAAESGVSAQHLKRLADRFILTRIRHGVYRLTGTPIHPTDHVRAQ 69
Query 75 ----DLAAAVSWTLG----RGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELY 126
D + + +G RGV SH +A L L D++ TVPR + R+ G
Sbjct 70 WLALDPTRSATERIGSADPRGVASHRTAADLRQLGDIDADIAEFTVPRRRNTRSDG---V 126
Query 127 RVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGS-AA 185
R H L H + +DG+PVTT ARTI D + TD L + A + RG +
Sbjct 127 RFHVATLDPTHWSLLDGLPVTTTARTIVDLASSRTDGGHLAGVVWDALRTDQVSRGQLES 186
Query 186 ELR 188
ELR
Sbjct 187 ELR 189
>gi|302335265|ref|YP_003800472.1| hypothetical protein Olsu_0476 [Olsenella uli DSM 7084]
gi|301319105|gb|ADK67592.1| conserved hypothetical protein [Olsenella uli DSM 7084]
Length=176
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/143 (36%), Positives = 72/143 (51%), Gaps = 4/143 (2%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M +D + E A + HG +T+ A ++GV +L A RGRLERVG G+YR+ ++
Sbjct 1 MTKFDDIYEEAVDSHGLITSARAAELGVTNNELVQYARRGRLERVGHGLYRLARRVPEDN 60
Query 74 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDL 133
D A AV+ + ES +A+ LA NPSR+H+ VP R G + V R D
Sbjct 61 DPYALAVALAGPGAYLFGESVIAMLGLAPTNPSRLHVAVPGRIRRRLPDGLV--VERGD- 117
Query 134 QAAHVTSVDGIPVTTVARTIKDC 156
T+ DGI T I+ C
Sbjct 118 -GMGTTAYDGISSQTAEAAIRAC 139
>gi|257063017|ref|YP_003142689.1| hypothetical protein Shel_02720 [Slackia heliotrinireducens DSM
20476]
gi|256790670|gb|ACV21340.1| hypothetical protein Shel_02720 [Slackia heliotrinireducens DSM
20476]
Length=207
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/157 (30%), Positives = 78/157 (50%), Gaps = 3/157 (1%)
Query 3 AKPYLIDTIAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGV 62
A+ Y M +D + E+A + + ++T+ A+ G+ V+L LA RG+L V G+
Sbjct 17 AQQYHFWYYCAMTYYDDIYEIAVDNYYLISTQQAQQAGIPSVELAKLAHRGKLSHVSHGL 76
Query 63 YRVPVLPRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAG 122
YR+ E+D A AV+ + ES +AL LA +PSRI++ P R
Sbjct 77 YRLVRHVPHENDSYAIAVARVGNGAYLYGESVIALLNLAPTDPSRIYVASPHRVRGRKVD 136
Query 123 GELYRVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKT 159
G L + R ++ VT+ +GIP + I+ C+ +
Sbjct 137 G-LETIVRGEVHD--VTAYEGIPSQEIGSAIRSCIGS 170
>gi|330824421|ref|YP_004387724.1| hypothetical protein Alide2_1823 [Alicycliphilus denitrificans
K601]
gi|329309793|gb|AEB84208.1| hypothetical protein Alide2_1823 [Alicycliphilus denitrificans
K601]
Length=203
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/169 (32%), Positives = 83/169 (50%), Gaps = 12/169 (7%)
Query 27 QHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSWTLGR 86
+ G++ TRD IG V L L+ G+LERVGRG+YR+P P E +DL A ++ + +
Sbjct 16 KQGFLRTRDLDTIGAPRVVLTRLSTSGQLERVGRGLYRLPGNPMSEKEDL-ATIAVKVPK 74
Query 87 GVISHESALALHALADVNPSRIHLTVPRNNH-PRAAGGELYRVHRRDLQAAHVTSVDG-- 143
V +AL H L P ++ + +PR +H PR + V A+ +D
Sbjct 75 AVFCLLTALQFHELTTQLPRQVWIAMPRGSHTPRIEHPPIKMVQMAG--DAYALGIDEHE 132
Query 144 -----IPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAEL 187
+ + + A+T+ DC K + L AIE +A R+ SA +L
Sbjct 133 RDGARLRIYSAAKTVADCFK-HRNQIGLDVAIEALKAAWKTRKASADDL 180
>gi|121583145|ref|YP_973586.1| hypothetical protein Pnap_4574 [Polaromonas naphthalenivorans
CJ2]
gi|120596407|gb|ABM39844.1| conserved hypothetical protein [Polaromonas naphthalenivorans
CJ2]
Length=202
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/147 (34%), Positives = 76/147 (52%), Gaps = 8/147 (5%)
Query 18 DRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLA 77
R++E+A QHG + +RD + +G V L L G+LE+VGRG+YR+P E + L
Sbjct 9 QRVLELA-RQHGLLRSRDLQAVGAPRVMLTRLMASGQLEKVGRGLYRLPQTQMSEDESL- 66
Query 78 AAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNH-PRAAGGELYRVH---RRDL 133
AA++ + + V +AL H L P ++ L +PR +H PR + V +
Sbjct 67 AAIAIKVPQAVFCLLTALQFHGLTTQLPRQVWLAMPRGSHAPRIDYPPIRMVQYSGQSYS 126
Query 134 QAAHVTSVDGIP--VTTVARTIKDCVK 158
Q V D + V +VA+T+ DC K
Sbjct 127 QGIEVFERDRVLLRVYSVAKTVVDCFK 153
>gi|229492910|ref|ZP_04386706.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229320184|gb|EEN86009.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=264
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/156 (34%), Positives = 72/156 (47%), Gaps = 16/156 (10%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L ++A EQ G T+ A + GV L+ LA R L R+ GVYR+ P D + A
Sbjct 10 LADLAQEQWGMFTSAQAAESGVSAQHLKRLADRFILTRIRHGVYRLTGTPIHLTDHVRAQ 69
Query 80 -------------VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELY 126
++ RGV SH +A L L D++ TVPR + R+ G
Sbjct 70 WLALDPTRSAAERINSADPRGVASHRTAADLRELGDIDADIAEFTVPRRRNTRSDG---V 126
Query 127 RVHRRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTD 162
R H L + +DG+PVTT ARTI D + TD
Sbjct 127 RFHVAALDPTDWSLLDGLPVTTTARTIVDLASSRTD 162
>gi|288870936|ref|ZP_06115821.2| putative abortive infection protein AbiGI [Clostridium hathewayi
DSM 13479]
gi|288865348|gb|EFC97646.1| putative abortive infection protein AbiGI [Clostridium hathewayi
DSM 13479]
Length=219
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/104 (35%), Positives = 55/104 (53%), Gaps = 4/104 (3%)
Query 12 AHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRG 71
M + ++++A + +G VT D G+ L+ L RGRLE+V RGVY LP+
Sbjct 21 TFMNATEAIIQMAEKNNGIVTNMMVVDAGISRGNLKYLVDRGRLEKVSRGVY---TLPKV 77
Query 72 EHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRN 115
D+L + RG+ S+E+AL L L D P+ ++T P N
Sbjct 78 WEDEL-FNLQMRFKRGIFSYETALFLCDLTDRTPNYYNMTFPSN 120
>gi|229490185|ref|ZP_04384032.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
gi|229322933|gb|EEN88707.1| conserved hypothetical protein [Rhodococcus erythropolis SK121]
Length=192
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (28%), Positives = 80/191 (42%), Gaps = 6/191 (3%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
++ L +A Q G+VT A ++G + + G RG++R+ + D+
Sbjct 5 YESLELLALRQCGFVTALQASELGFGLALMEEMTESGTWTCECRGLFRLERVRHTALDEF 64
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAA 136
A +W G +SH SA LH L + P IHL+V HP AA +HR L
Sbjct 65 AKWCTWFAGSATVSHYSAADLHGLGHLQPRFIHLSVA---HPLAAPTRQVALHRLPLADD 121
Query 137 HVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRRGSAAELRAALDETTA 196
+ I +TT RT+ D G L + A A G R A EL + + +
Sbjct 122 ECEQIGPIRITTPLRTVHDLASGGISQVLLNEVVADAVAIG---RLDAHELYLSCENASV 178
Query 197 GLRARPKRASA 207
+ R + A A
Sbjct 179 DVAVRVELALA 189
>gi|54027175|ref|YP_121417.1| hypothetical protein nfa52010 [Nocardia farcinica IFM 10152]
gi|54018683|dbj|BAD60053.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length=202
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/188 (32%), Positives = 79/188 (43%), Gaps = 16/188 (8%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
W L +A G+ TTR G + ++R G + R G G+ R+ P G D+
Sbjct 17 WRVLRRLAGRHAGFFTTRQVLRAGCE-ARVRAALAEGTVRRAGVGILRLSEWPEGPLDEY 75
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAA 136
A +W G +SH SA LH L ++P +HL+V P V RR L AA
Sbjct 76 AMWSAWFDGAVAVSHHSAADLHGLGRLHPRFLHLSVGAGRPPVT---PRLVVLRRALPAA 132
Query 137 HVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAI------------ERAEAEGTLRRGSA 184
+ S VTT RT+ D +T L + E A A TL SA
Sbjct 133 DLESAGAFLVTTPVRTVVDLAETDIGQAALDEVVRDAVVIGRCTHDEIATAASTLELRSA 192
Query 185 AELRAALD 192
A +R ALD
Sbjct 193 ARVRRALD 200
>gi|326329796|ref|ZP_08196116.1| hypothetical protein NBCG_01229 [Nocardioidaceae bacterium Broad-1]
gi|325952382|gb|EGD44402.1| hypothetical protein NBCG_01229 [Nocardioidaceae bacterium Broad-1]
Length=188
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (41%), Positives = 56/97 (58%), Gaps = 0/97 (0%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M+ L E+A + HG VT +A GV V++R LA RG L R+G+GVYR+ + G
Sbjct 1 MSYRSVLRELAFDTHGVVTLAEAGSCGVPAVEVRKLASRGALVRLGQGVYRMAEVAPGPL 60
Query 74 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHL 110
D+ AAAV+ V++ ES LA + L +N RI +
Sbjct 61 DEFAAAVALVGADAVLADESVLAAYDLGQINVRRIKV 97
>gi|38234629|ref|NP_940396.1| hypothetical protein DIP2072 [Corynebacterium diphtheriae NCTC
13129]
gi|38200893|emb|CAE50598.1| Hypothetical protein DIP2072 [Corynebacterium diphtheriae]
Length=370
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (32%), Positives = 72/166 (44%), Gaps = 24/166 (14%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L ++A++Q G T+ A+D GVD LR L RG RV GVY +L A
Sbjct 10 LSDLASQQWGLFTSAQAKDSGVDLPSLRRLEKRGVFTRVRHGVYASTTTVLSTELELKA- 68
Query 80 VSW-----------------TLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAG 122
W + V+SH +A + + D+ P IH TV R R
Sbjct 69 -QWLSLQPNLMAAERISDPSLVADAVVSHTTAAEVWEIGDLWPDGIHFTVNRRRRSRQTD 127
Query 123 GELYRVHRRDLQAAH--VTSVDGIPVTTVARTIKDCVKTGTDPYQL 166
+ HR DL + V G+P+TTV RTI D ++G +P L
Sbjct 128 ---VQFHRADLADSDWVVHPASGLPITTVPRTILDLAQSGHEPDHL 170
>gi|226305084|ref|YP_002765042.1| hypothetical protein RER_15950 [Rhodococcus erythropolis PR4]
gi|226184199|dbj|BAH32303.1| hypothetical protein RER_15950 [Rhodococcus erythropolis PR4]
Length=192
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (29%), Positives = 68/163 (42%), Gaps = 3/163 (1%)
Query 17 WDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDL 76
++ L +A Q G+VT A ++G + + G RG++R+ + D+
Sbjct 5 YESLELLALRQCGFVTALQASELGFGLASMEEMTESGTWTCECRGLFRLERVRHTALDEF 64
Query 77 AAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAA 136
A +W G +SH SA LH L + P IHL+ HP AA +HR L
Sbjct 65 AKWCTWFAGSATVSHYSAADLHGLGHLQPRFIHLS---TAHPLAAPTRQVALHRLPLADD 121
Query 137 HVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTL 179
+ I +TT RT+ D G L + A A G L
Sbjct 122 ECEQIGPIRITTPLRTVHDLASGGISQVLLNEVVADAVAIGRL 164
>gi|306836851|ref|ZP_07469808.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304567258|gb|EFM42866.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length=272
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/157 (27%), Positives = 74/157 (48%), Gaps = 14/157 (8%)
Query 11 IAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPR 70
+ + + +L +AA+Q G +TT A+ G+ +QL LA RG L R RGV+ +P
Sbjct 11 MKSLEVLQQLESLAADQWGIITTAQAQREGISRLQLNRLAERGTLSRARRGVFFLPSAQF 70
Query 71 GEHDD------------LAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHP 118
G D A + + SHESA +H + D+ P + T +
Sbjct 71 GPMTDSREAWICLEPKLFAVERIASTEKLFASHESAALIHNIGDLIPEK--QTFSSTSRK 128
Query 119 RAAGGELYRVHRRDLQAAHVTSVDGIPVTTVARTIKD 155
+ + +++ + R ++ + +DG+PV +V RT+ D
Sbjct 129 QTSQDDIHVYNHRQIEPGDIDYLDGLPVASVERTVAD 165
>gi|307701536|ref|ZP_07638553.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
gi|307613215|gb|EFN92467.1| conserved hypothetical protein [Mobiluncus mulieris FB024-16]
Length=191
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/181 (31%), Positives = 81/181 (45%), Gaps = 18/181 (9%)
Query 23 VAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSW 82
+A Q G VTT + + G L L G+LER RG+Y V E D +
Sbjct 5 LATGQGGVVTTAEVTEAGFRRESLGDLVNEGKLERYSRGIYTVV----DEWPDEMVLLQR 60
Query 83 TLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGG---ELYRVHRRDLQAAHVT 139
R V SHE+AL LH LAD PSR +TVP +PR+ ++YR +R+ T
Sbjct 61 RYTRMVFSHETALYLHELADTAPSRYTVTVPSGYNPRSLADQDLQVYRCNRKLYPLGLTT 120
Query 140 SV----DGIPVTTVARTIKDCVKTGTD------PYQLRAAIERAEAEGTLRRGSAAELRA 189
+V +G+ R++ D + G D + +R ++ E AA+LR
Sbjct 121 TVTPHGNGVAAYDRERSLCDLFR-GQDVVTEQINFAMREYLDSPEKNLPKLTDYAAKLRV 179
Query 190 A 190
A
Sbjct 180 A 180
>gi|260904062|ref|ZP_05912384.1| hypothetical protein BlinB_01937 [Brevibacterium linens BL2]
Length=179
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/140 (35%), Positives = 66/140 (48%), Gaps = 7/140 (5%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L E+AA+QHG VT +A D GV V++R LA RG L G+GVY +P + + A A
Sbjct 7 LWEIAAQQHGVVTIAEAEDAGVPAVEVRKLAHRGALRAYGKGVYIHCSVPTTDLTEPAVA 66
Query 80 VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNH---PRAAGGELYRVHRRDLQAA 136
+ + E+ L + L NP RI + R P E R D+
Sbjct 67 TALAGDGAFLERETVLDMRGLGQFNPHRIWVATRRRVRRTLPEWVDLET----RMDVPDE 122
Query 137 HVTSVDGIPVTTVARTIKDC 156
+T +GIP TTV R + D
Sbjct 123 DLTHYEGIPATTVRRALVDV 142
>gi|284043174|ref|YP_003393514.1| hypothetical protein Cwoe_1712 [Conexibacter woesei DSM 14684]
gi|283947395|gb|ADB50139.1| hypothetical protein Cwoe_1712 [Conexibacter woesei DSM 14684]
Length=237
Score = 62.0 bits (149), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/161 (38%), Positives = 75/161 (47%), Gaps = 6/161 (3%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
+ +AA QHG V+ RD GV L GRL R+ GVY + AA
Sbjct 28 IAALAARQHGVVSRGQLRDAGVTGRALDWRLTNGRLLRLHPGVYAAGHARLTRNGHWLAA 87
Query 80 VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVH-RRDLQAAHV 138
V T V+SH SA ALH L N I +T + G VH RR L A V
Sbjct 88 VLATGPGAVLSHRSAAALHDLRPDNRRAIDVTTAAHR----IGSARIVVHARRSLDARDV 143
Query 139 TSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTL 179
SVDG+PVTTVART+ D + P QL A+ A+ + T
Sbjct 144 ASVDGVPVTTVARTLVDLAEV-VPPDQLTNALRAADRQRTF 183
>gi|284043023|ref|YP_003393363.1| hypothetical protein Cwoe_1560 [Conexibacter woesei DSM 14684]
gi|283947244|gb|ADB49988.1| hypothetical protein Cwoe_1560 [Conexibacter woesei DSM 14684]
Length=304
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/153 (39%), Positives = 74/153 (49%), Gaps = 7/153 (4%)
Query 23 VAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSW 82
+A +QHG V+ R R G +R G G L R+ RGVY V + AAV
Sbjct 14 LAHDQHGVVSRRQLRHTGWSDTMVRDRTGSGHLLRLHRGVYAVGHVRLRREGRWMAAVLA 73
Query 83 TLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHR-RDLQAAHVTSV 141
G V+SH A ALH + + I +T R A G RVHR R L A T+
Sbjct 74 VPG-AVLSHRDAAALHGVRPPHDGAIDVTT--TGRGRVARG--VRVHRTRTLDPADTTTR 128
Query 142 DGIPVTTVARTIKDCVKTGTDPYQLRAAIERAE 174
GIPVT+VART+ D P+QL AA+ AE
Sbjct 129 AGIPVTSVARTLVDLASV-VQPHQLLAALNEAE 160
>gi|336392544|ref|ZP_08573943.1| hypothetical protein LcortK3_07237 [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length=197
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/103 (34%), Positives = 51/103 (50%), Gaps = 4/103 (3%)
Query 34 RDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSWTLGRGVISHES 93
+ A+ G+ ++R L+ G +E+V RG+Y P G D + +S RG+ S S
Sbjct 17 KTAQKYGLSKDEIRKLSTDGTIEKVDRGIYVFP----GYLLDEFSLISQKFSRGIFSLVS 72
Query 94 ALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAA 136
AL +H L D P LT P+ HP AA E Y + R L +
Sbjct 73 ALIIHDLTDEMPLHYDLTFPQGYHPSAASLEKYHIKARYLSKS 115
>gi|284042969|ref|YP_003393309.1| hypothetical protein Cwoe_1506 [Conexibacter woesei DSM 14684]
gi|283947190|gb|ADB49934.1| hypothetical protein Cwoe_1506 [Conexibacter woesei DSM 14684]
Length=306
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/139 (39%), Positives = 68/139 (49%), Gaps = 6/139 (4%)
Query 19 RLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAA 78
RL E+A Q G V R +G+ P +R RG L R+ RGVY V R + +
Sbjct 12 RLQELAEAQFGVVGRRQLGALGLSPTMVRDRLDRGSLVRLHRGVYAVG-HRRLRREGIRL 70
Query 79 AVSWTLGRG-VISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAAH 137
A + G G V+SH A LH + N I +TV RA G L HR L
Sbjct 71 AAVFAAGPGAVLSHRDAAGLHGIRPANHRNIDVTVD-GKRARAPGIAL---HRATLTPDD 126
Query 138 VTSVDGIPVTTVARTIKDC 156
VT +DGIPVTT+ART+ D
Sbjct 127 VTQIDGIPVTTLARTLVDL 145
>gi|312141139|ref|YP_004008475.1| hypothetical protein REQ_38080 [Rhodococcus equi 103S]
gi|325674039|ref|ZP_08153729.1| hypothetical protein HMPREF0724_11511 [Rhodococcus equi ATCC
33707]
gi|311890478|emb|CBH49796.1| conserved hypothetical protein [Rhodococcus equi 103S]
gi|325555304|gb|EGD24976.1| hypothetical protein HMPREF0724_11511 [Rhodococcus equi ATCC
33707]
Length=203
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/141 (31%), Positives = 65/141 (47%), Gaps = 3/141 (2%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
L +A Q GY TT A +G + G R+ R ++R+ PR + ++ A
Sbjct 19 LRRLALRQAGYFTTGQALRLGCTTEDIGGRLAEGSWLRIERDLFRLASFPRSDLEEFAKW 78
Query 80 VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRVHRRDLQAAHVT 139
+W G V+SH+SA LH L ++PS +HL+ + P A +HRR+L+A
Sbjct 79 CAWFEGAAVVSHQSAAELHGLGHLHPSFVHLST-QATAP--APTRRLALHRRELRAQDYE 135
Query 140 SVDGIPVTTVARTIKDCVKTG 160
V +TT T D G
Sbjct 136 VVGTFGITTPLCTALDLATGG 156
>gi|306817767|ref|ZP_07451508.1| possible transcriptional regulator [Mobiluncus mulieris ATCC
35239]
gi|304649416|gb|EFM46700.1| possible transcriptional regulator [Mobiluncus mulieris ATCC
35239]
Length=191
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 79/180 (44%), Gaps = 16/180 (8%)
Query 23 VAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSW 82
+A Q G VTT + + G L L G+LER RG+Y V E D +
Sbjct 5 LATGQGGVVTTAEVTEAGFRRESLGDLVNEGKLERYSRGIYTVV----DEWPDEMVLLQR 60
Query 83 TLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGG---ELYRVHRRDLQAAHVT 139
R V SHE+AL LH LAD P R +TVP +PR+ ++YR +R+ T
Sbjct 61 RYTRMVFSHETALYLHGLADTAPRRYTVTVPSGYNPRSLADQDLQVYRCNRKLYPLGLTT 120
Query 140 SV----DGIPVTTVARTIKDCVK-----TGTDPYQLRAAIERAEAEGTLRRGSAAELRAA 190
+V +G+ R++ D + T + +R ++ E AA+LR A
Sbjct 121 TVTPYGNGVAAYDRERSLCDLFRGQDVVTEQINFAMREYLDSPEKNLPKLTDYAAKLRVA 180
>gi|292493714|ref|YP_003529153.1| hypothetical protein Nhal_3750 [Nitrosococcus halophilus Nc4]
gi|291582309|gb|ADE16766.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length=207
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/177 (32%), Positives = 78/177 (45%), Gaps = 10/177 (5%)
Query 9 DTIAHMAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVL 68
+T A+ D + + + G + TRDA +G+ P L + G LER+ RG+YR+ L
Sbjct 4 ETTANKGSIDAAIHLFSCHGGVLCTRDALRLGIHPRTLYAMRDAGLLERLSRGLYRLADL 63
Query 69 PRGEHDDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGGELYRV 128
P + DL AV+ + GVI SAL H L P ++L +PR P RV
Sbjct 64 PPLGNPDL-VAVALKVPGGVICLISALDYHELTTQIPHEVYLALPRGAEPPRLEHPPLRV 122
Query 129 H----RRDLQAAHVTSVDGIPVTTVARTIKDCVKTGTDPYQLRAAIERAEAEGTLRR 181
+ + VDG+PV I KT D ++ R I A LRR
Sbjct 123 FWVGGKAFTEGVETHEVDGVPV-----RIYGAEKTLADSFKYRNKIGLDTAIEALRR 174
>gi|308179912|ref|YP_003924040.1| putative abortive infection protein AbiGI [Lactobacillus plantarum
subsp. plantarum ST-III]
gi|308045403|gb|ADN97946.1| putative abortive infection protein AbiGI [Lactobacillus plantarum
subsp. plantarum ST-III]
Length=197
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (26%), Positives = 77/158 (49%), Gaps = 21/158 (13%)
Query 14 MAIWDRLVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEH 73
M + ++ + G +T++ A +G+ P LR + G+LER+ GVY P+ E
Sbjct 1 MGQREEIIAYLNKNGGQITSKTANSMGISPRVLRSMYAHGQLERLAPGVYIDPL----EF 56
Query 74 DDLAAAVSWTLGRGVISHESALALHALADVNPSRIHLTVP-------RNNHPRAAGGELY 126
D AA+ ++L +G+ ++AL L+ + D PS + P +N+ P ++Y
Sbjct 57 GDDIAALQYSLSKGIFFKDTALFLYGMIDRTPSTYEMNFPLPYAYSTKNDAPI----KIY 112
Query 127 RVHRRDLQAAHVTSVDG-----IPVTTVARTIKDCVKT 159
R +++L +T+ + V V RT+ D ++T
Sbjct 113 R-QQKELYEIGITTTKTPGGHLVKVYDVERTLCDILRT 149
>gi|269977805|ref|ZP_06184762.1| putative abortive Infection Protein AbiGI [Mobiluncus mulieris
28-1]
gi|269933975|gb|EEZ90552.1| putative abortive Infection Protein AbiGI [Mobiluncus mulieris
28-1]
Length=191
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/181 (31%), Positives = 80/181 (45%), Gaps = 18/181 (9%)
Query 23 VAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAAVSW 82
+A Q G VTT + + G L L G+LER RG+Y V E D +
Sbjct 5 LATGQGGVVTTAEVTEAGFRRESLGDLVNEGKLERYSRGIYTVV----DEWPDEMVLLQR 60
Query 83 TLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAGG---ELYRVHRRDLQAAHVT 139
R V SHE+AL LH LAD P R +TVP +PR+ ++YR +R+ T
Sbjct 61 RYTRMVFSHETALYLHGLADTAPRRYTVTVPSGYNPRSLADQDLQVYRCNRKLYPLGLTT 120
Query 140 SV----DGIPVTTVARTIKDCVKTGTD------PYQLRAAIERAEAEGTLRRGSAAELRA 189
+V +G+ R++ D + G D + +R ++ E AA+LR
Sbjct 121 TVTPYGNGVAAYDRERSLCDLFR-GQDVVTEQINFAMREYLDSPEKNLPKLTDYAAKLRV 179
Query 190 A 190
A
Sbjct 180 A 180
>gi|257885893|ref|ZP_05665546.1| abortive infection protein AbiGI [Enterococcus faecium 1,231,501]
gi|293569500|ref|ZP_06680784.1| conserved hypothetical protein [Enterococcus faecium E1071]
gi|257821749|gb|EEV48879.1| abortive infection protein AbiGI [Enterococcus faecium 1,231,501]
gi|291587769|gb|EFF19633.1| conserved hypothetical protein [Enterococcus faecium E1071]
Length=198
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/103 (33%), Positives = 53/103 (52%), Gaps = 4/103 (3%)
Query 20 LVEVAAEQHGYVTTRDARDIGVDPVQLRLLAGRGRLERVGRGVYRVPVLPRGEHDDLAAA 79
+ ++ E +G + +DA+ G+ PV ++ + RG L+R G + +P G+ D
Sbjct 6 VYKLLEEFNGTLALKDAKKAGISPVTIKRMVDRGELDREYPGFFTLP----GQFPDELFM 61
Query 80 VSWTLGRGVISHESALALHALADVNPSRIHLTVPRNNHPRAAG 122
RG+ISH +AL L+ L D+ P +I LTVP H G
Sbjct 62 AQKKYERGIISHITALDLYDLTDMIPRQIDLTVPYGYHVSEKG 104
Lambda K H
0.320 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 236380426956
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40