BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1045
Length=293
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608185|ref|NP_215561.1| hypothetical protein Rv1045 [Mycoba... 588 3e-166
gi|31792236|ref|NP_854729.1| hypothetical protein Mb1074 [Mycoba... 585 4e-165
gi|289569026|ref|ZP_06449253.1| hypothetical protein TBJG_01531 ... 584 5e-165
gi|323720502|gb|EGB29585.1| hypothetical protein TMMG_03044 [Myc... 531 3e-149
gi|308231712|ref|ZP_07663915.1| hypothetical protein TMAG_00988 ... 513 1e-143
gi|308371843|ref|ZP_07426426.2| LOW QUALITY PROTEIN: hypothetica... 486 1e-135
gi|308373013|ref|ZP_07430738.2| LOW QUALITY PROTEIN: hypothetica... 475 4e-132
gi|289757128|ref|ZP_06516506.1| predicted protein [Mycobacterium... 364 1e-98
gi|339294046|gb|AEJ46157.1| hypothetical protein CCDC5079_0967 [... 348 6e-94
gi|339294045|gb|AEJ46156.1| hypothetical protein CCDC5079_0966 [... 231 8e-59
gi|336117544|ref|YP_004572312.1| hypothetical protein MLP_18950 ... 124 2e-26
gi|302335266|ref|YP_003800473.1| Domain of unknown function DUF1... 123 3e-26
gi|325832012|ref|ZP_08165109.1| hypothetical protein HMPREF9404_... 119 4e-25
gi|317488596|ref|ZP_07947141.1| hypothetical protein HMPREF1023_... 119 6e-25
gi|257063016|ref|YP_003142688.1| protein of unknown function (DU... 117 2e-24
gi|317489063|ref|ZP_07947588.1| hypothetical protein HMPREF1023_... 111 2e-22
gi|257792778|ref|YP_003183384.1| hypothetical protein Elen_3052 ... 109 6e-22
gi|325831060|ref|ZP_08164384.1| hypothetical protein HMPREF9404_... 108 8e-22
gi|226228974|ref|YP_002763080.1| hypothetical protein GAU_3568 [... 101 1e-19
gi|326329795|ref|ZP_08196115.1| LigA [Nocardioidaceae bacterium ... 96.3 5e-18
gi|315657243|ref|ZP_07910125.1| conserved hypothetical protein [... 92.8 6e-17
gi|304391157|ref|ZP_07373107.1| conserved hypothetical protein [... 92.4 7e-17
gi|298346250|ref|YP_003718937.1| hypothetical protein HMPREF0573... 90.9 2e-16
gi|269216408|ref|ZP_06160262.1| conserved hypothetical protein [... 89.4 6e-16
gi|260904061|ref|ZP_05912383.1| hypothetical protein BlinB_01932... 66.2 5e-09
gi|239917081|ref|YP_002956639.1| protein of unknown function (DU... 58.9 9e-07
gi|153003937|ref|YP_001378262.1| hypothetical protein Anae109_10... 51.6 1e-04
gi|86159702|ref|YP_466487.1| hypothetical protein Adeh_3282 [Ana... 51.6 1e-04
gi|254777456|ref|ZP_05218972.1| hypothetical protein MaviaA2_226... 50.4 3e-04
gi|168702702|ref|ZP_02734979.1| hypothetical protein GobsU_24456... 45.1 0.015
gi|269216409|ref|ZP_06160263.1| conserved hypothetical protein [... 43.5 0.036
gi|118462531|ref|YP_884146.1| hypothetical protein MAV_5026 [Myc... 41.2 0.17
gi|269955261|ref|YP_003325050.1| hypothetical protein Xcel_0453 ... 39.3 0.64
gi|297625396|ref|YP_003687159.1| hypothetical protein PFREUD_019... 37.0 3.9
>gi|15608185|ref|NP_215561.1| hypothetical protein Rv1045 [Mycobacterium tuberculosis H37Rv]
gi|15840475|ref|NP_335512.1| hypothetical protein MT1075 [Mycobacterium tuberculosis CDC1551]
gi|121636974|ref|YP_977197.1| hypothetical protein BCG_1103 [Mycobacterium bovis BCG str. Pasteur
1173P2]
43 more sequence titles
Length=293
Score = 588 bits (1516), Expect = 3e-166, Method: Compositional matrix adjust.
Identities = 292/293 (99%), Positives = 293/293 (100%), Gaps = 0/293 (0%)
Query 1 VTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
+TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV
Sbjct 1 MTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
Query 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP 120
KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP
Sbjct 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP 120
Query 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM
Sbjct 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
Query 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ
Sbjct 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
Query 241 HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR
Sbjct 241 HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
>gi|31792236|ref|NP_854729.1| hypothetical protein Mb1074 [Mycobacterium bovis AF2122/97]
gi|31617824|emb|CAD93934.1| HYPOTHETICAL PROTEIN Mb1074 [Mycobacterium bovis AF2122/97]
Length=293
Score = 585 bits (1507), Expect = 4e-165, Method: Compositional matrix adjust.
Identities = 291/293 (99%), Positives = 292/293 (99%), Gaps = 0/293 (0%)
Query 1 VTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
+TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV
Sbjct 1 MTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
Query 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP 120
KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETG EGFTAIFTAPEEIDVP
Sbjct 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGGEGFTAIFTAPEEIDVP 120
Query 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM
Sbjct 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
Query 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ
Sbjct 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
Query 241 HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR
Sbjct 241 HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
>gi|289569026|ref|ZP_06449253.1| hypothetical protein TBJG_01531 [Mycobacterium tuberculosis T17]
gi|289542780|gb|EFD46428.1| hypothetical protein TBJG_01531 [Mycobacterium tuberculosis T17]
Length=293
Score = 584 bits (1506), Expect = 5e-165, Method: Compositional matrix adjust.
Identities = 291/293 (99%), Positives = 292/293 (99%), Gaps = 0/293 (0%)
Query 1 VTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
+TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV
Sbjct 1 MTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
Query 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP 120
KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP
Sbjct 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP 120
Query 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM
Sbjct 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
Query 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ
Sbjct 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
Query 241 HPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
HPWPPRVATLPHWPLI AGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR
Sbjct 241 HPWPPRVATLPHWPLICAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
>gi|323720502|gb|EGB29585.1| hypothetical protein TMMG_03044 [Mycobacterium tuberculosis CDC1551A]
Length=265
Score = 531 bits (1369), Expect = 3e-149, Method: Compositional matrix adjust.
Identities = 264/265 (99%), Positives = 265/265 (100%), Gaps = 0/265 (0%)
Query 29 VFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRD 88
+FGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRD
Sbjct 1 MFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRD 60
Query 89 IELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVS 148
IELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVS
Sbjct 61 IELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVS 120
Query 149 SVEAGNADQFDTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHD 208
SVEAGNADQFDTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHD
Sbjct 121 SVEAGNADQFDTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHD 180
Query 209 LVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLE 268
LVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLE
Sbjct 181 LVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLE 240
Query 269 LARTVDAAAQAVQRFVARIDRATKR 293
LARTVDAAAQAVQRFVARIDRATKR
Sbjct 241 LARTVDAAAQAVQRFVARIDRATKR 265
>gi|308231712|ref|ZP_07663915.1| hypothetical protein TMAG_00988 [Mycobacterium tuberculosis SUMu001]
gi|308370591|ref|ZP_07666974.1| hypothetical protein TMCG_00664 [Mycobacterium tuberculosis SUMu003]
gi|308374183|ref|ZP_07667730.1| hypothetical protein TMFG_02868 [Mycobacterium tuberculosis SUMu006]
15 more sequence titles
Length=255
Score = 513 bits (1321), Expect = 1e-143, Method: Compositional matrix adjust.
Identities = 255/255 (100%), Positives = 255/255 (100%), Gaps = 0/255 (0%)
Query 39 MIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLAD 98
MIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLAD
Sbjct 1 MIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLAD 60
Query 99 AGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQF 158
AGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQF
Sbjct 61 AGETGWEGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQF 120
Query 159 DTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGL 218
DTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGL
Sbjct 121 DTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGL 180
Query 219 LLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQ 278
LLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQ
Sbjct 181 LLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQ 240
Query 279 AVQRFVARIDRATKR 293
AVQRFVARIDRATKR
Sbjct 241 AVQRFVARIDRATKR 255
>gi|308371843|ref|ZP_07426426.2| LOW QUALITY PROTEIN: hypothetical protein TMDG_04037 [Mycobacterium
tuberculosis SUMu004]
gi|308335280|gb|EFP24131.1| LOW QUALITY PROTEIN: hypothetical protein TMDG_04037 [Mycobacterium
tuberculosis SUMu004]
Length=241
Score = 486 bits (1252), Expect = 1e-135, Method: Compositional matrix adjust.
Identities = 241/241 (100%), Positives = 241/241 (100%), Gaps = 0/241 (0%)
Query 53 TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT 112
TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT
Sbjct 1 TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT 60
Query 113 APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP 172
APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP
Sbjct 61 APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP 120
Query 173 AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI 232
AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI
Sbjct 121 AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI 180
Query 233 AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATK 292
AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATK
Sbjct 181 AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATK 240
Query 293 R 293
R
Sbjct 241 R 241
>gi|308373013|ref|ZP_07430738.2| LOW QUALITY PROTEIN: hypothetical protein TMEG_00935 [Mycobacterium
tuberculosis SUMu005]
gi|308339087|gb|EFP27938.1| LOW QUALITY PROTEIN: hypothetical protein TMEG_00935 [Mycobacterium
tuberculosis SUMu005]
Length=246
Score = 475 bits (1222), Expect = 4e-132, Method: Compositional matrix adjust.
Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 53 TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT 112
TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT
Sbjct 12 TGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT 71
Query 113 APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP 172
APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP
Sbjct 72 APEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVP 131
Query 173 AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI 232
AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI
Sbjct 132 AAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACI 191
Query 233 AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARI 287
AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARI
Sbjct 192 AIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARI 246
>gi|289757128|ref|ZP_06516506.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289712692|gb|EFD76704.1| predicted protein [Mycobacterium tuberculosis T85]
Length=190
Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 180/180 (100%), Positives = 180/180 (100%), Gaps = 0/180 (0%)
Query 114 PEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPA 173
PEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPA
Sbjct 11 PEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPA 70
Query 174 AVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIA 233
AVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIA
Sbjct 71 AVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIA 130
Query 234 IFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
IFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR
Sbjct 131 IFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 190
>gi|339294046|gb|AEJ46157.1| hypothetical protein CCDC5079_0967 [Mycobacterium tuberculosis
CCDC5079]
gi|339297686|gb|AEJ49796.1| hypothetical protein CCDC5180_0959 [Mycobacterium tuberculosis
CCDC5180]
Length=172
Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 172/172 (100%), Positives = 172/172 (100%), Gaps = 0/172 (0%)
Query 122 MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT 181
MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT
Sbjct 1 MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT 60
Query 182 IPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQH 241
IPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQH
Sbjct 61 IPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQH 120
Query 242 PWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 293
PWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR
Sbjct 121 PWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATKR 172
>gi|339294045|gb|AEJ46156.1| hypothetical protein CCDC5079_0966 [Mycobacterium tuberculosis
CCDC5079]
gi|339297685|gb|AEJ49795.1| hypothetical protein CCDC5180_0958 [Mycobacterium tuberculosis
CCDC5180]
Length=132
Score = 231 bits (590), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 113/116 (98%), Positives = 116/116 (100%), Gaps = 0/116 (0%)
Query 1 VTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
+TKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV
Sbjct 1 MTKPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLV 60
Query 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEE 116
KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAP++
Sbjct 61 KGGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPKK 116
>gi|336117544|ref|YP_004572312.1| hypothetical protein MLP_18950 [Microlunatus phosphovorus NM-1]
gi|334685324|dbj|BAK34909.1| hypothetical protein MLP_18950 [Microlunatus phosphovorus NM-1]
Length=282
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/297 (35%), Positives = 139/297 (47%), Gaps = 31/297 (10%)
Query 7 SPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSL 66
PPT++ L+ R+ VA+ QG R+Q + +AQ P VKGG+++
Sbjct 4 KPPTSVGLLQSRMHTVAQAQGTSPARIQVVIGTTALAQMM---------PACAVKGGTAM 54
Query 67 ELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVP-GMP-- 123
+ R G +R ++D D D ++L D+ GW FT P G+P
Sbjct 55 KFRFG-GATRFTRDLDVARAADAATFRQELQDSLRAGWGDFTGTLAEARAKPAPAGIPLA 113
Query 124 --VKPRRFTAKLSYRGRAFATVPIEVSSVEAGN-ADQFDTLTSDALGL---VGVPAAVAV 177
+KP F KL+YRGR+F TVP+EV E G+ AD L D L +G+ V
Sbjct 114 YVMKP--FDVKLAYRGRSFMTVPLEVGHDEIGDTADAELALAPDIQSLFETLGLLIPEPV 171
Query 178 PCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLL--EGLLLDADLMPTRSACIAIF 235
P + Q+ QKLHA TAV E RAHDLVDLQ+L DL TR A +F
Sbjct 172 PVLATHHQVVQKLHACTAVGSE-----RAHDLVDLQILIEHDKQRPLDLPVTRRAAARLF 226
Query 236 EARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRATK 292
+R H WPP + P W +Y A +G + + +D A + RID A K
Sbjct 227 SSRHAHAWPPAITPRPGWEPLYQEAAQG---MPVRPNLDDACAWGNALIQRIDAAPK 280
>gi|302335266|ref|YP_003800473.1| Domain of unknown function DUF1814 [Olsenella uli DSM 7084]
gi|301319106|gb|ADK67593.1| Domain of unknown function DUF1814 [Olsenella uli DSM 7084]
Length=264
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/275 (35%), Positives = 134/275 (49%), Gaps = 29/275 (10%)
Query 9 PTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLEL 68
P + R+L D + A +G F R + +A ++V Q P VKGGSS++L
Sbjct 4 PNSRRNL-DVAIERAFGRGRSFTRARATIANVIVGQML---------PDGAVKGGSSIKL 53
Query 69 RRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMP----V 124
R G +R + D D D+E +L + GWEGFT E G+P +
Sbjct 54 RLGEGATRYTTDLDVARASDLEDWIARLRSSLAEGWEGFTGRVVTREPASPEGVPAAYVM 113
Query 125 KPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDT----LTSDALGLVGVPAAVAVPCM 180
+P F KL Y G+ + TV +EV E G+AD+ D + +G+P+ VP M
Sbjct 114 QP--FAVKLDYNGKPWVTVDLEVGHNEIGDADEPDLCLPRFVVEMFESIGLPSPGPVPLM 171
Query 181 TIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQ 240
+ QIAQKLH L EP + RAHDL+DLQLL D D TRS C +F R
Sbjct 172 PVSHQIAQKLHG----LSEPG-SRRAHDLIDLQLLVA-GCDVDYAKTRSVCERLFAYRQM 225
Query 241 HPWPPRVATLPHWPLIY---AGALEGLDHLELART 272
WPP++ W +Y +G L+ +D +ELA T
Sbjct 226 QSWPPKIDGSADWNDLYREQSGELDVVDDVELAVT 260
>gi|325832012|ref|ZP_08165109.1| hypothetical protein HMPREF9404_4347 [Eggerthella sp. HGA1]
gi|325486333|gb|EGC88785.1| hypothetical protein HMPREF9404_4347 [Eggerthella sp. HGA1]
Length=274
Score = 119 bits (299), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/292 (33%), Positives = 133/292 (46%), Gaps = 27/292 (9%)
Query 6 SSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSS 65
+ P +R L D + + + RL+ +A +VAQ P +VKGGSS
Sbjct 2 TKKPNGMRHLDDAIRRSCGGAAQDYMRLRTRMANAIVAQML---------PDGVVKGGSS 52
Query 66 LELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEI---DVPGM 122
+++R G +R + D D D +L E+L D GWEGFT + DVP
Sbjct 53 IKMRYGDAATRFTTDLDMATAMDADLNMERLNDRLRQGWEGFTGRVVRKDPASPKDVPEE 112
Query 123 PVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTL----TSDALGLVGVPAAVAVP 178
V + KLSY G+ + TVP+EV E G+AD + ++ +G P P
Sbjct 113 YVM-QPCEVKLSYLGKPWCTVPLEVGFNEIGDADTIEWSDMPDVAELFEGIGFPPPGKAP 171
Query 179 CMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEAR 238
M + Q+ QKLHAV+ DRA DLVDLQL+ + DL+ TR C +F R
Sbjct 172 LMPLDHQVTQKLHAVSG------AGDRARDLVDLQLIMH-RSEVDLVATRRICERLFSYR 224
Query 239 AQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRA 290
WPP V+ W +YA E L + VD+A V + RI A
Sbjct 225 KAQEWPPIVSKKAGWDELYA---EQASDLPVLDDVDSAIDWVNDLIVRIGNA 273
>gi|317488596|ref|ZP_07947141.1| hypothetical protein HMPREF1023_00839 [Eggerthella sp. 1_3_56FAA]
gi|316912338|gb|EFV33902.1| hypothetical protein HMPREF1023_00839 [Eggerthella sp. 1_3_56FAA]
Length=274
Score = 119 bits (297), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/292 (33%), Positives = 133/292 (46%), Gaps = 27/292 (9%)
Query 6 SSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSS 65
+ P +R L D + + + RL+ +A +VAQ P +VKGGSS
Sbjct 2 TKKPNGMRHLDDAIRRSCGGAAQDYMRLRTRMANAIVAQML---------PDGVVKGGSS 52
Query 66 LELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEI---DVPGM 122
+++R G +R + D D D +L E+L D GWEGFT + DVP
Sbjct 53 IKMRYGDAATRFTTDLDMATAMDADLNIERLNDRLRQGWEGFTGRVVRKDPASPKDVPEE 112
Query 123 PVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTL----TSDALGLVGVPAAVAVP 178
V + KLSY G+ + TVP+EV E G+AD + ++ +G P P
Sbjct 113 YVM-QPCEVKLSYLGKPWCTVPLEVGFNEIGDADTIEWSDMPDVAELFEGIGFPPPGKAP 171
Query 179 CMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEAR 238
M + Q+ QKLHAV+ DRA DLVDLQL+ + DL+ TR C +F R
Sbjct 172 LMPLDHQVTQKLHAVSG------AGDRARDLVDLQLIMH-RSEVDLVATRRICERLFSYR 224
Query 239 AQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRA 290
WPP V+ W +YA E L + VD+A V + RI A
Sbjct 225 KAQEWPPIVSKKAGWDELYA---EQASDLPVLDDVDSAIDWVNDLIVRIGNA 273
>gi|257063016|ref|YP_003142688.1| protein of unknown function (DUF1814) [Slackia heliotrinireducens
DSM 20476]
gi|256790669|gb|ACV21339.1| protein of unknown function (DUF1814) [Slackia heliotrinireducens
DSM 20476]
Length=268
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/238 (37%), Positives = 117/238 (50%), Gaps = 23/238 (9%)
Query 30 FGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDI 89
F R + +A +V Q P +VKGG++L+LR G +R + D DT +
Sbjct 13 FVRYRTTIANAIVGQLL---------PSGVVKGGTALKLRFGNSATRFTTDLDTARSESL 63
Query 90 ELIHEQLADAGETGWEGFTAIF---TAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIE 146
+ ++L++ + GWEGFT T DVP V + F KLSY GRA+ TVP+E
Sbjct 64 DRFIDELSERLDEGWEGFTGRIVTRTPASPADVPHRYVM-QPFDVKLSYAGRAWCTVPLE 122
Query 147 VSSVEAGNADQFDTLTS----DALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKV 202
V E G+A + + S + L+G P +P M + QIAQKLH L EP
Sbjct 123 VGHNEIGDACEPELSMSPDVAEMFTLLGFPEPGPIPLMPLHHQIAQKLHG----LSEPN- 177
Query 203 NDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGA 260
+ RAHDLVDLQL+ DL TR C +F R PWP + W +YA A
Sbjct 178 SKRAHDLVDLQLISK-HGSVDLRKTRETCERLFAYRKAQPWPCEIRCGTGWGELYASA 234
>gi|317489063|ref|ZP_07947588.1| hypothetical protein HMPREF1023_01287 [Eggerthella sp. 1_3_56FAA]
gi|316911795|gb|EFV33379.1| hypothetical protein HMPREF1023_01287 [Eggerthella sp. 1_3_56FAA]
Length=316
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/308 (31%), Positives = 141/308 (46%), Gaps = 28/308 (9%)
Query 3 KPYSSPPTNLRSLRDRLTQVAERQGVV-FGRLQRHVAMIVVAQFAATLTDDTGAPLLLVK 61
KP P N L + G+ GR++ +A V+ + DD A +K
Sbjct 17 KPRGKEPRNAGVLDSWIDHAEADFGIAASGRVRWLIASTVITAMLQQVVDDDNACRFSLK 76
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDI----ELIHEQLADAGETGWEGFTAIFTAPEEI 117
GG+ L+ G+ SR +KD D + R D+ EL+ EQ W F + E+I
Sbjct 77 GGTLLQHVFGLA-SRATKDIDGIVRGDLDEFLELMDEQFV---SRNWGPFEFARSEIEQI 132
Query 118 DVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAV 177
VPG + PRRF +S R + + + +EVS E + + +L G+P +
Sbjct 133 RVPGKSICPRRFVVTVSLRNKTWRKIKVEVSPDEGMAGSAQEPFAAPSLEGFGIPTPEKL 192
Query 178 PCMTIPWQIAQKLHAVTAVLEEPK--VNDRAHDLVDLQLLEGLLLDADLMPTRS----AC 231
M + +Q AQK+HA T + K N+R DLVDL L++ L D+ P++S A
Sbjct 193 VGMAMCYQAAQKIHAATDPHDPDKGYRNNRPRDLVDLVLIKQ-LSDSTGHPSKSDIKRAV 251
Query 232 IAIFEARAQHP---------WPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQR 282
I IFEARA+ WP +V PHW Y A + +D L + + AA+ V
Sbjct 252 IDIFEARAKEAVKADREPRVWPTKVVVYPHWANDYLAAAQAVD---LRMSAEEAAEVVNA 308
Query 283 FVARIDRA 290
++ +D A
Sbjct 309 WLLELDGA 316
>gi|257792778|ref|YP_003183384.1| hypothetical protein Elen_3052 [Eggerthella lenta DSM 2243]
gi|257476675|gb|ACV56995.1| Domain of unknown function DUF1814 [Eggerthella lenta DSM 2243]
Length=304
Score = 109 bits (272), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/305 (30%), Positives = 142/305 (47%), Gaps = 22/305 (7%)
Query 3 KPYSSPPTNLRSLRDRLTQVAERQGVV-FGRLQRHVAMIVVAQFAATLTDDTGAPLLLVK 61
KP P N L + G+ GR++ +A V+ + DD A +K
Sbjct 5 KPRGKEPRNAGVLDSWIDHAEADFGIAASGRVRWLIASTVITAMLQQVVDDDNACRFSLK 64
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETG-WEGFTAIFTAPEEIDVP 120
GG+ L+ G+ SR +KD D + R D++ E + + +G W F + E+I VP
Sbjct 65 GGTLLQHVFGLA-SRATKDIDGIVRGDLDEFLELMDERFVSGNWGPFEFARSEIEQIRVP 123
Query 121 GMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCM 180
G + PRRF +S R + + + +EVS E + + +L G+P + M
Sbjct 124 GKSICPRRFVVTVSLRNKTWRKIKVEVSPDEGMAGSAQEPFAAPSLEGFGIPTPEKLVGM 183
Query 181 TIPWQIAQKLHAVTAVLEEPK--VNDRAHDLVDLQLLEGLLLDADLMPTRS----ACIAI 234
+ +Q AQK+HA T + K N+R DLVDL L++ L D+ P++S A + I
Sbjct 184 AMCYQAAQKIHAATDPHDPDKGYRNNRPRDLVDLVLIK-QLSDSTGHPSKSDIKRAVVDI 242
Query 235 FEARAQHP---------WPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVA 285
FEARA+ WP +V PHW Y A + +D L + + AA+ V ++
Sbjct 243 FEARAKEAVKADREPRVWPTKVVVYPHWANDYLAAAQAVD---LRMSAEEAAEVVNAWLL 299
Query 286 RIDRA 290
+D A
Sbjct 300 ELDGA 304
>gi|325831060|ref|ZP_08164384.1| hypothetical protein HMPREF9404_4702 [Eggerthella sp. HGA1]
gi|325486981|gb|EGC89427.1| hypothetical protein HMPREF9404_4702 [Eggerthella sp. HGA1]
Length=316
Score = 108 bits (271), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/308 (30%), Positives = 140/308 (46%), Gaps = 28/308 (9%)
Query 3 KPYSSPPTNLRSLRDRLTQVAERQGVV-FGRLQRHVAMIVVAQFAATLTDDTGAPLLLVK 61
KP P N L + G+ GR++ +A V+ + DD A +K
Sbjct 17 KPRGKEPRNAGVLDSWIDHAEADFGIAASGRVRWLIASTVITAMLQQVVDDDNACRFSLK 76
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDI----ELIHEQLADAGETGWEGFTAIFTAPEEI 117
GG+ L+ G+ SR +KD D + R D+ EL+ EQ W F + E+I
Sbjct 77 GGTLLQHVFGLA-SRATKDIDGIVRGDLDEFLELMDEQFV---SRNWGPFEFARSEIEQI 132
Query 118 DVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAV 177
VPG + PRRF +S R + + + +EVS E + + +L G+P +
Sbjct 133 RVPGKSICPRRFVVTVSLRNKTWRKIKVEVSPDEGMAGSAQEPFAAPSLEGFGIPTPEKL 192
Query 178 PCMTIPWQIAQKLHAVTAVLEEPK--VNDRAHDLVDLQLLEGLLLDADLMPTRS----AC 231
M + +Q AQK+HA T + K N+R DLVDL L++ L D+ P++S A
Sbjct 193 VGMAMCYQAAQKIHAATDPHDPDKGYRNNRPRDLVDLVLIKQ-LSDSTGHPSKSDIKRAV 251
Query 232 IAIFEARAQHP---------WPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQR 282
I FEARA+ WP +V PHW Y A + +D L + + AA+ V
Sbjct 252 IDTFEARAKEAVKADREPRVWPTKVVVYPHWANDYLAAAQAVD---LRMSAEEAAEVVNA 308
Query 283 FVARIDRA 290
++ +D A
Sbjct 309 WLLELDGA 316
>gi|226228974|ref|YP_002763080.1| hypothetical protein GAU_3568 [Gemmatimonas aurantiaca T-27]
gi|226092165|dbj|BAH40610.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length=287
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/287 (31%), Positives = 144/287 (51%), Gaps = 18/287 (6%)
Query 9 PTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLEL 68
P ++ L + A R+G+ GR++ ++ ++++ P +VKGG +LEL
Sbjct 14 PPSVGKLEKYVLAHANREGLAVGRVRHWISFMMLSGALDRAAGRPAGPRFIVKGGVALEL 73
Query 69 RRGIPD-SRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPGMPVKPR 127
R +P +R ++D D VA D + + L +A + T F+ E P+ R
Sbjct 74 R--LPTRARATEDLDIVAVCDKDDLIAALDEALREPYHDCT--FSRRAET----RPLGDR 125
Query 128 --RFTAKLSYRGRAFATVPIEVSSVEAGNAD--QFDTLTSDALGLVGVPAAVAVPCMTIP 183
R +++YR + +AT+ ++++ + +A+ + ++ + GL+G PA VA C+++
Sbjct 126 ALRVWVQIAYRSQRWATIQVDLARPDGADAETERLPSIPLSSFGLIG-PADVA--CLSMR 182
Query 184 WQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPW 243
+ +AQK H +T V NDR D VDL LL LL L R AC F RA+HPW
Sbjct 183 YHVAQKFHGMTKVPRHGGENDRFRDAVDLLLLRELLHGTSLQAIREACEDTFRIRAEHPW 242
Query 244 PPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFVARIDRA 290
PP + P W YA L E +DAA +A++ F+A I+ A
Sbjct 243 PPAIVLPPSWREPYAAMARALGIQET--NLDAAERALREFLAAIEAA 287
>gi|326329795|ref|ZP_08196115.1| LigA [Nocardioidaceae bacterium Broad-1]
gi|325952381|gb|EGD44401.1| LigA [Nocardioidaceae bacterium Broad-1]
Length=286
Score = 96.3 bits (238), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/270 (33%), Positives = 125/270 (47%), Gaps = 31/270 (11%)
Query 9 PTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLEL 68
P +R L T +A +G+ RL VA +V+AQ L D VKGG+ L+L
Sbjct 2 PRRVRDLIRSTTLLAAERGISQKRLVALVANVVLAQM---LPDSA------VKGGTGLKL 52
Query 69 RRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT-----APEEIDVPGMP 123
R G +R + D D R D++ ++LA GW GFT T APE VP
Sbjct 53 RFGERLTRETPDVDAAYRGDLDTFRDELAGRLGVGWHGFTGEVTMGERRAPE--SVPAAY 110
Query 124 VKPRRFTAKLSYRGRAFATVPIEVSSVE---AGNADQFDTLTSDALGL---VGVPAAVAV 177
V + F +L + + F + +E+ E N ++S+ L + +G+P AV
Sbjct 111 VM-QPFRVRLKFARKTFKAIDLEIGYDELESTTNEPPELVMSSEVLEIFEALGLPEPAAV 169
Query 178 PCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEA 237
+ QIAQK+HA TA + RAHDLVDLQL ++ D +F
Sbjct 170 RVQPLHHQIAQKIHACTA-----PHSQRAHDLVDLQL---IVPTTDPRLVAKVTERLFAF 221
Query 238 RAQHPWPPRVATLPHWPLIYAGALEGLDHL 267
R +H WPP ++ W +Y A EGLD L
Sbjct 222 RREHDWPPLLSAGARWESLYEEAAEGLDVL 251
>gi|315657243|ref|ZP_07910125.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491715|gb|EFU81324.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length=328
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/275 (31%), Positives = 128/275 (47%), Gaps = 18/275 (6%)
Query 6 SSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVA---QFAATLTD-DTGAPLLLVK 61
S P + R L + Q + G RL +A VV Q A D P L+K
Sbjct 30 SKEPFSARVLDKWVEQAQAQLGTRGPRLGWLIAATVVTGVLQRACVAGDGKNSGPFFLLK 89
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPG 121
GG+ L+ R G +R ++D D + R D + +L W F T E I VPG
Sbjct 90 GGTMLQYRLG-DTTRNTRDIDGLVRTDFDTFFNELDKVLVESWGPFEFSRTEAEVITVPG 148
Query 122 MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT 181
+KPRRF + +G + V +E+S+ E +++ + +L GV + + ++
Sbjct 149 RVLKPRRFDVLVLIKGVTWRRVQVEISADEGDAGRLVESVVAPSLAGFGVESPARIATLS 208
Query 182 IPWQIAQKLHAVTAVLEEPK-VNDRAHDLVDLQLLEGLLLDA---DLMPTRSACIAIFEA 237
+ +QIAQK+HAVT + P+ VNDR+ D+VDL LL L+ + +L +A +FE
Sbjct 209 MSYQIAQKVHAVTGPHQPPELVNDRSRDVVDLLLLRDLVQRSGAPELDEIAAAIHDVFEV 268
Query 238 RAQ---------HPWPPRVATLPHWPLIYAGALEG 263
RA+ WP RV PHW + EG
Sbjct 269 RAREAANLGVKVQTWPARVVAWPHWETSFTTESEG 303
>gi|304391157|ref|ZP_07373107.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
gi|304325592|gb|EFL92840.1| conserved hypothetical protein [Mobiluncus curtisii subsp. curtisii
ATCC 35241]
Length=328
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 85/275 (31%), Positives = 128/275 (47%), Gaps = 18/275 (6%)
Query 6 SSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVA---QFAATLTD-DTGAPLLLVK 61
S P + R L + Q + G RL +A VV Q A D P L+K
Sbjct 30 SKEPFSARVLDKWVEQAQAQLGTRGPRLGWLIAATVVTGVLQRACVAGDGKNSGPFFLLK 89
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPG 121
GG+ L+ R G +R ++D D + R D + +L W F T E I VPG
Sbjct 90 GGTMLQYRLG-DTTRNTRDIDGLVRTDFDTFFNELDKVLVESWGPFEFSRTEAEVITVPG 148
Query 122 MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT 181
+KPRRF + +G + V +E+S+ E +++ + +L GV + + ++
Sbjct 149 RVLKPRRFDVLVLIKGVTWRRVQVEISADEGDAGRLVESVAAPSLAGFGVESPARIATLS 208
Query 182 IPWQIAQKLHAVTAVLEEPK-VNDRAHDLVDLQLLEGLLLDA---DLMPTRSACIAIFEA 237
+ +QIAQK+HAVT + P+ VNDR+ D+VDL LL L+ + +L +A +FE
Sbjct 209 MSYQIAQKVHAVTGPHQPPELVNDRSRDVVDLLLLRDLVQRSGAPELDEIAAAIHDVFEV 268
Query 238 RAQ---------HPWPPRVATLPHWPLIYAGALEG 263
RA+ WP RV PHW + EG
Sbjct 269 RAREAANLGVKVQTWPARVVAWPHWETSFTTESEG 303
>gi|298346250|ref|YP_003718937.1| hypothetical protein HMPREF0573_11124 [Mobiluncus curtisii ATCC
43063]
gi|298236311|gb|ADI67443.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 43063]
Length=328
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/265 (32%), Positives = 125/265 (48%), Gaps = 18/265 (6%)
Query 6 SSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVA---QFAATLTD-DTGAPLLLVK 61
S P + R L + Q + G RL +A VV Q A D P L+K
Sbjct 30 SKEPFSARVLDKWVEQAQAQLGTRGPRLGWLIAATVVTGVLQRACVAGDGKNSGPFFLLK 89
Query 62 GGSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPEEIDVPG 121
GG+ L+ R G +R ++D D + R D + +L W F T E I VPG
Sbjct 90 GGTMLQYRLG-DTTRNTRDIDGLVRTDFDTFFNELDKVLVESWGPFEFSRTEAEVITVPG 148
Query 122 MPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAVPCMT 181
+KPRRF + +G + V +E+S+ E +++ + +L GV + + ++
Sbjct 149 RVLKPRRFDVLVLIKGVTWRRVQVEISADEGDAGRLVESVAAPSLAGFGVESPARIATLS 208
Query 182 IPWQIAQKLHAVTAVLEEPK-VNDRAHDLVDLQLLEGLLLDA---DLMPTRSACIAIFEA 237
+ +QIAQK+HAVT + P+ VNDR+ D+VDL LL L+ + +L +A +FE
Sbjct 209 MSYQIAQKVHAVTGPHQPPELVNDRSRDVVDLLLLRDLVQRSGAPELDEIAAAIHDVFEV 268
Query 238 RAQ---------HPWPPRVATLPHW 253
RA+ WP RV PHW
Sbjct 269 RAREAANLGVKVQTWPARVVAWPHW 293
>gi|269216408|ref|ZP_06160262.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
gi|269130667|gb|EEZ61745.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
Length=160
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/163 (39%), Positives = 84/163 (52%), Gaps = 15/163 (9%)
Query 129 FTAKLSYRGRAFATVPIEVSSVEAGNADQFDT----LTSDALGLVGVPAAVAVPCMTIPW 184
F KL Y G+ + TV +EV E G+AD+ D + +G+P+ VP M +
Sbjct 4 FAVKLDYNGKPWVTVDLEVGHNEIGDADEPDPCLPRFIVEMFESIGLPSPGPVPLMPVSH 63
Query 185 QIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWP 244
QIAQKLH L EP + RAHDL+DLQLL D D TRS C +F R WP
Sbjct 64 QIAQKLHG----LSEPG-SKRAHDLIDLQLLVAGC-DVDYAKTRSVCERLFAYRQMQSWP 117
Query 245 PRVATLPHWPLIY---AGALEGLDHLELARTVDAAAQAVQRFV 284
P++ W +Y +G L+ + +ELA T A + V+R V
Sbjct 118 PKIDGSADWNDLYREQSGELDVVGDVELAVT--WANELVERIV 158
>gi|260904061|ref|ZP_05912383.1| hypothetical protein BlinB_01932 [Brevibacterium linens BL2]
Length=284
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/239 (29%), Positives = 100/239 (42%), Gaps = 40/239 (16%)
Query 32 RLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIEL 91
R++R + ++V+Q L D +KGG ++LR G +R + D D R E
Sbjct 5 RVRRMLCTLIVSQM---LPDAVA-----IKGGMGVKLRMGESGTRATADLDVSTLRRGEE 56
Query 92 IHEQLADAGETGWEGFTAIFTA-PEEIDVPG-------MPVKP-------------RRFT 130
E + GW A A ++ D PG + +P R +
Sbjct 57 FEEAFRVSLAPGWGTVPATKGARKQDPDAPGRVAFTADLKSRPLHDPGLAQPQYVMRPYR 116
Query 131 AKLSYRGRAFATVPIEVSSVE----AGNADQFDTLTSDALGLVGVPAAVAVPCMTIPWQI 186
LS+ GR + + +EVS E A Q D + G A V + + +QI
Sbjct 117 VTLSFLGREWGGLDLEVSDPEIEPHAHTRRQIDGELIELSSRFGFGALQPVELIDLEYQI 176
Query 187 AQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPP 245
QK+HA+T +P + RAHDLVDLQLL + +L R C+ F R WPP
Sbjct 177 GQKIHALT----DPDYS-RAHDLVDLQLL--WAAEPELDSVREFCVRTFNFRRAREWPP 228
>gi|239917081|ref|YP_002956639.1| protein of unknown function (DUF1814) [Micrococcus luteus NCTC
2665]
gi|281414457|ref|ZP_06246199.1| hypothetical protein MlutN2_04482 [Micrococcus luteus NCTC 2665]
gi|239838288|gb|ACS30085.1| protein of unknown function (DUF1814) [Micrococcus luteus NCTC
2665]
Length=345
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 95/340 (28%), Positives = 138/340 (41%), Gaps = 84/340 (24%)
Query 9 PTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLEL 68
P + L RL +A+ GV R +R + ++VAQ L + ++VKG + + L
Sbjct 22 PRSEGQLNRRLEAIADAMGVPVDRARRLLGAVIVAQM---LPEG-----VVVKGANGVRL 73
Query 69 RRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGF---------------TAIFTA 113
R G +R ++D D +AR D + + L + GW A F
Sbjct 74 RHGATGTRATRDLDLLAR-DPQQALKDLTGFVDRGWGAAPGSKRELKADPAATRVAFFGT 132
Query 114 PEEID------VPGMPVKPR-RFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLT---- 162
E D VP V R + T ++ +VPIE+ D+F+ T
Sbjct 133 VHEDDPAEPLGVPDPYVLSRAKVTLHFLSPRTSWVSVPIEIGR------DEFEGSTLAQP 186
Query 163 --------SDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQL 214
++A+ +G +V M + Q+AQK+HAVT +P R HDLVD+QL
Sbjct 187 VEVVAPQVAEAVTALGCGTPRSVAVMAVEQQLAQKIHAVT----DPH-QTRGHDLVDIQL 241
Query 215 L------EG---LLLDADLM--------PTRSACIAIFEARAQHPWPPRVATLPHWPLIY 257
L EG + L ADL+ P R+A H WPP VA + Y
Sbjct 242 LWHGAEAEGGVDIPLLADLVSRTFMFRSPGRTAA-----GHTPHEWPPPVAHVRTLEQGY 296
Query 258 AGAL-------EGLDHLELARTVDAAAQAVQRFVARIDRA 290
AL EG L R D AA ++ + RI RA
Sbjct 297 LDALEETRVGAEGQARLLQPRVSD-AADWLESLITRIARA 335
>gi|153003937|ref|YP_001378262.1| hypothetical protein Anae109_1070 [Anaeromyxobacter sp. Fw109-5]
gi|152027510|gb|ABS25278.1| Domain of unknown function DUF1814 [Anaeromyxobacter sp. Fw109-5]
Length=299
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/269 (28%), Positives = 110/269 (41%), Gaps = 24/269 (8%)
Query 3 KPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKG 62
+ Y++P +L RL VAE G+ R ++V ++ A L G +L KG
Sbjct 4 RAYATPAAFKAALDQRLRNVAEPGGIA-----RRRQLLVFDRYLARLVRVLGDAAIL-KG 57
Query 63 GSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGF----TAIFTAPEEID 118
G LELR + +RT++D D + + +L AG F + T +I
Sbjct 58 GLVLELR--LERARTTRDIDLRLVGSPDGLLARLQRAGRLDLGDFMFFEVTVDTRHPDIA 115
Query 119 VPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQF----DTLTSDALGLVGVPAA 174
PG+ + +RF A+ G + + V+ D + +T D L AA
Sbjct 116 GPGVQYEGQRFRAECRLAGMLYG----QPFGVDVAFGDPILGGPELITGDDLLAFAGIAA 171
Query 175 VAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAI 234
+ + +A+KLHA T P R DL DL LL G + D R+A
Sbjct 172 PELRVYPVETHVAEKLHAYTLPRATPST--RVKDLPDLALL-GQIGPRDARRVRAALEQT 228
Query 235 FEARAQHPWPPRVATLP-HWPLIYAGALE 262
F RA HP P R+ P W YA E
Sbjct 229 FGFRATHPAPSRLPDPPTDWREPYAAIAE 257
>gi|86159702|ref|YP_466487.1| hypothetical protein Adeh_3282 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776213|gb|ABC83050.1| hypothetical protein Adeh_3282 [Anaeromyxobacter dehalogenans
2CP-C]
Length=299
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/266 (28%), Positives = 112/266 (43%), Gaps = 18/266 (6%)
Query 3 KPYSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKG 62
+ Y++P +L DRL +VAE G+ R ++V ++ A L G L KG
Sbjct 4 REYATPAAFKAALDDRLRKVAEPGGIA-----RRRQLLVFDRYLARLVRVLGDAATL-KG 57
Query 63 GSSLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFTAPE----EID 118
G LELR + +RT++D D + + +L +AG F + + +I
Sbjct 58 GLVLELR--LERARTTRDIDLRVVGSPDGLLARLQEAGRLDLGDFMSFEVRVDARHPDIT 115
Query 119 VPGMPVKPRRFTAKLSYRGRAFAT-VPIEVSSVEAGNADQFDTLTSDALGLVGVPAAVAV 177
PG+ + +RF A+ G + ++V+ + + D L G+ AA +
Sbjct 116 GPGVQYEGQRFRAECRLAGMLYGQPFGVDVAFGDPILGEPELITGDDLLAFAGI-AAPEL 174
Query 178 PCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEA 237
+ +A+KLHA T P R D+ DL LL G + D R+A F
Sbjct 175 RVYPVETHVAEKLHAYTLPRATPST--RVKDMPDLALL-GQIGPRDARRLRAALAQTFGF 231
Query 238 RAQHPWPPRVATLP-HWPLIYAGALE 262
RA H P R+ P W YA E
Sbjct 232 RATHQAPRRLPDPPLEWTEPYAAMAE 257
>gi|254777456|ref|ZP_05218972.1| hypothetical protein MaviaA2_22696 [Mycobacterium avium subsp.
avium ATCC 25291]
Length=288
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/288 (30%), Positives = 127/288 (45%), Gaps = 26/288 (9%)
Query 5 YSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMI-VVAQFAATLTDDTGAPLLLVKGG 63
YSSP +L RL + GV RL+R V ++A+ A + G L ++KGG
Sbjct 3 YSSPQALRTALEHRLLMASREAGVGLDRLRRRVLFERIMARLQAA---EPG--LWVLKGG 57
Query 64 SSLELRRGIPD-SRTSKDFDTVARRDI---ELIHEQLADAGETGWEGFTAIF--TAPEEI 117
+LE+R + D +R +KD D R D+ ++HE+L DA G IF + P +
Sbjct 58 MALEVR--LSDAARVTKDIDVGLRDDVLSPAVLHERLIDALSDDPFGDRFIFEVSEPTAL 115
Query 118 DVPGMPVKPRRFTAKLSYRGRAFATVPIEVS--SVEAGNADQFDTLTSDALGLVGVPAAV 175
G R G+ F + ++VS + E DQ S L G+P
Sbjct 116 REDGGGHLTWRVPVAAFLAGKPFGAIKLDVSPRAHELQATDQLPLPNS--LDFAGIP-TT 172
Query 176 AVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIF 235
V + + A+K HA+T E+ + + L + L+E LL++ L+ A A++
Sbjct 173 EVEIVDVHRHAAEKFHAMTRDFEDRENSRVRDLLDLVLLIENDLLNSGLVA--DAARAVW 230
Query 236 EARAQHPWPPR-VATLP-HWPLIYAGALEGLDHLELARTVDAAAQAVQ 281
R PPR + LP WP YA + DH ART A VQ
Sbjct 231 AER-NGTGPPRPLPALPSSWPARYAQLAD--DHDVEARTFPQAVALVQ 275
>gi|168702702|ref|ZP_02734979.1| hypothetical protein GobsU_24456 [Gemmata obscuriglobus UQM 2246]
Length=257
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 56/199 (29%), Positives = 88/199 (45%), Gaps = 23/199 (11%)
Query 56 PLLLVKGGSSLELRRGIPDSRTSKDFDTVARRDIELI-----------HEQLADAGETGW 104
P L+KGG +++LR P +RT+KD D + LI ++L +A +
Sbjct 20 PPWLLKGGFAMDLRFR-PRARTTKDVDL----SVSLITGGGDARSAGLRDRLQEALDVDL 74
Query 105 EGFTAIFTAPEEIDVPGMPVKPRRFTAKLSYRGRAFATVPIEVSSVEAGNADQFDTLTSD 164
+ + ++ P +F + G+ +A I+V +A + D
Sbjct 75 GDYLTFRLGTPKRELTNAPGGGAQFPCEAVLVGKTYAAFHIDVGVGDALIGTPERLVGED 134
Query 165 ALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVLEEPKVNDRAHDLVDLQLL--EGLLLDA 222
L VGVP A AV + P Q A+K+HA T ++N R DLVDL LL G A
Sbjct 135 LLEFVGVPPA-AVLAIPKPQQFAEKVHAYTFPWVG-RLNSRTKDLVDLVLLIERGAPAVA 192
Query 223 DLMPTRSACIAIFEARAQH 241
++ R+A + F R+ H
Sbjct 193 EI---RAALVTTFTTRSTH 208
>gi|269216409|ref|ZP_06160263.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
gi|269130668|gb|EEZ61746.1| conserved hypothetical protein [Slackia exigua ATCC 700122]
Length=132
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/101 (33%), Positives = 50/101 (50%), Gaps = 10/101 (9%)
Query 9 PTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGSSLEL 68
P + R+L D + A +G F R++ +A ++V Q P VKGGSS++L
Sbjct 4 PNSRRNL-DVAIERAFGRGRSFTRVRATIANVIVGQML---------PDGAVKGGSSIKL 53
Query 69 RRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTA 109
R G +R + D D D+E +L ++ GWEGFT
Sbjct 54 RLGEGATRYTTDLDVARASDLEDWIARLRNSLAEGWEGFTG 94
>gi|118462531|ref|YP_884146.1| hypothetical protein MAV_5026 [Mycobacterium avium 104]
gi|118163818|gb|ABK64715.1| conserved hypothetical protein [Mycobacterium avium 104]
Length=270
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 78/266 (30%), Positives = 118/266 (45%), Gaps = 26/266 (9%)
Query 27 GVVFGRLQRHVAMI-VVAQFAATLTDDTGAPLLLVKGGSSLELRRGIPD-SRTSKDFDTV 84
GV RL+R V ++A+ A + G L ++KGG +LE+R + D +R +KD D
Sbjct 7 GVGLDRLRRRVLFERIMARLQAA---EPG--LWVLKGGMALEVR--LSDAARVTKDIDVG 59
Query 85 ARRDI---ELIHEQLADAGETGWEGFTAIF--TAPEEIDVPGMPVKPRRFTAKLSYRGRA 139
R D+ ++HE+L DA G IF + P + G R G+
Sbjct 60 LRDDVLSPAVLHERLIDALSDDPFGDRFIFEVSEPTALREDGGGHLTWRVPVAAFLAGKP 119
Query 140 FATVPIEVS--SVEAGNADQFDTLTSDALGLVGVPAAVAVPCMTIPWQIAQKLHAVTAVL 197
F + ++VS + E DQ S L G+P V + + A+K HA+T
Sbjct 120 FGAIKLDVSPRAHELQATDQLPLPNS--LDFAGIP-TTEVEIVDVHRHAAEKFHAMTRDF 176
Query 198 EEPKVNDRAHDLVDLQLLEGLLLDADLMPTRSACIAIFEARAQHPWPPR-VATLP-HWPL 255
E+ + + L + L+E LL++ L+ A A++ R PPR + LP WP
Sbjct 177 EDRENSRVRDLLDLVLLIENDLLNSGLVA--DAARAVWAER-NGTGPPRPLPALPSSWPA 233
Query 256 IYAGALEGLDHLELARTVDAAAQAVQ 281
YA + DH ART A VQ
Sbjct 234 RYAQLAD--DHDVEARTFPQAVALVQ 257
>gi|269955261|ref|YP_003325050.1| hypothetical protein Xcel_0453 [Xylanimonas cellulosilytica DSM
15894]
gi|269303942|gb|ACZ29492.1| hypothetical protein Xcel_0453 [Xylanimonas cellulosilytica DSM
15894]
Length=120
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/119 (27%), Positives = 55/119 (47%), Gaps = 14/119 (11%)
Query 5 YSSPPTNLRSLRDRLTQVAERQGVVFGRLQRHVAMIVVAQFAATLTDDTGAPLLLVKGGS 64
Y++ P ++R+L R+ + E G + R + +A++VV Q P +KGGS
Sbjct 3 YTTTPVSVRTLEQRIRNL-EGSGELALRRRIAMALVVVGQML---------PEGAIKGGS 52
Query 65 SLELRRGIPDSRTSKDFDTVARRDIELIHEQLADAGETGWEGFTAIFT---APEEIDVP 120
++ LR G +R ++D D + + + ++ GW GFT AP VP
Sbjct 53 AMALRYG-RATRFTRDLDAARVQTLAGFRSEFEESLARGWAGFTGRLITRPAPRPTGVP 110
>gi|297625396|ref|YP_003687159.1| hypothetical protein PFREUD_01930 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921161|emb|CBL55708.1| Hypothetical protein PFREUD_01930 [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length=318
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 58/240 (25%), Positives = 96/240 (40%), Gaps = 29/240 (12%)
Query 59 LVKGGSSLELRRGIPDSRTSKDFDTVARRDI------ELIHEQLADAGETGWEGFTAIFT 112
L+KGG+++ R +P R ++D D R +L H D G+
Sbjct 58 LLKGGTAMLAR--VPTGRHTRDVDLSTTRATLDEAVEDLAHRVAVDMGDH--------LR 107
Query 113 APEEIDVPGMPV-KPRRFTAKLSY-----RGRAFATVPIEVSSVEAGNADQFDTLTSDAL 166
E + PG+ V +P A+LS+ G+ F V ++++ T +D+
Sbjct 108 FQLESERPGLAVTQPGVLVARLSFACITDTGKRFDNVAVDLAVGPPPVGHIEHTRPADSP 167
Query 167 GLVGVPAAVAVPCMTIPW--QIAQKLHAVTAVLEEPKVNDRAHDLVDLQLLEGLLLDADL 224
L P ++ P P Q+A+K+ + + + N RA DLVD+ ++ DL
Sbjct 168 DL---PRLISPPYAMFPLTDQLAEKVSTMMTPRPDGRPNSRAKDLVDVDIIAATQY-VDL 223
Query 225 MPTRSACIAIFEARAQHPWPPRVATLPHWPLIYAGALEGLDHLELARTVDAAAQAVQRFV 284
R A +A+ + RA + PHW Y G +A T A RF+
Sbjct 224 RELRLA-LAVQQQRANTDLGRHLRVPPHWEPRYQSLATGTSAAAVAPTFADAVDLAARFI 282
Lambda K H
0.321 0.135 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 483318443120
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40