BLASTP 2.2.25+
Reference:
Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database
search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei
Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and
Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST
protein database searches with composition-based statistics and
other refinements", Nucleic Acids Res. 29:2994-3005.
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
15,229,318 sequences; 5,219,829,388 total letters
Query= Rv1049
Length=148
Score E
Sequences producing significant alignments: (Bits) Value
gi|15608189|ref|NP_215565.1| transcriptional repressor protein [... 295 1e-78
gi|289446630|ref|ZP_06436374.1| transcriptional repressor [Mycob... 293 7e-78
gi|258515958|ref|YP_003192180.1| transcriptional regulator, MarR... 103 8e-21
gi|186686888|ref|YP_001870081.1| MarR family transcriptional reg... 101 4e-20
gi|333986031|ref|YP_004515241.1| MarR family transcriptional reg... 100 8e-20
gi|53803001|ref|YP_115207.1| MarR family transcriptional regulat... 96.7 1e-18
gi|301064445|ref|ZP_07204864.1| transcriptional regulator, MarR ... 95.5 2e-18
gi|196234654|ref|ZP_03133470.1| transcriptional regulator, MarR ... 95.1 3e-18
gi|225569515|ref|ZP_03778540.1| hypothetical protein CLOHYLEM_05... 95.1 3e-18
gi|159898527|ref|YP_001544774.1| MarR family transcriptional reg... 94.0 6e-18
gi|307728750|ref|YP_003905974.1| regulatory protein MarR [Burkho... 93.6 1e-17
gi|323138966|ref|ZP_08074027.1| transcriptional regulator, MarR ... 93.6 1e-17
gi|258593074|emb|CBE69385.1| Transcriptional regulator, MarR fam... 92.8 2e-17
gi|116748583|ref|YP_845270.1| MarR family transcriptional regula... 92.4 2e-17
gi|170695022|ref|ZP_02886171.1| transcriptional regulator, MarR ... 92.0 3e-17
gi|163795963|ref|ZP_02189926.1| transcriptional regulator, MarR ... 91.3 4e-17
gi|170695037|ref|ZP_02886186.1| transcriptional regulator, MarR ... 90.9 5e-17
gi|169335361|ref|ZP_02862554.1| hypothetical protein ANASTE_0177... 90.1 1e-16
gi|322435396|ref|YP_004217608.1| MarR family transcriptional reg... 89.4 2e-16
gi|170746528|ref|YP_001752788.1| MarR family transcriptional reg... 89.0 2e-16
gi|154250667|ref|YP_001411491.1| MarR family transcriptional reg... 89.0 2e-16
gi|148557383|ref|YP_001264965.1| MarR family transcriptional reg... 88.6 3e-16
gi|299535669|ref|ZP_07048990.1| MarR family transcriptional regu... 88.2 3e-16
gi|298241329|ref|ZP_06965136.1| transcriptional regulator, MarR ... 88.2 4e-16
gi|306845838|ref|ZP_07478406.1| MarR family transcriptional regu... 87.8 5e-16
gi|323525530|ref|YP_004227683.1| MarR family transcriptional reg... 87.8 5e-16
gi|146341546|ref|YP_001206594.1| MarR family transcriptional reg... 87.4 6e-16
gi|118587637|ref|ZP_01545047.1| Transcriptional Regulator, MarR ... 87.4 6e-16
gi|265985529|ref|ZP_06098264.1| transcriptional regulator [Bruce... 87.0 8e-16
gi|15888193|ref|NP_353874.1| MarR family transcriptional regulat... 86.7 1e-15
gi|296186448|ref|ZP_06854851.1| transcriptional regulator, MarR ... 86.7 1e-15
gi|209518571|ref|ZP_03267391.1| transcriptional regulator, MarR ... 86.7 1e-15
gi|17989130|ref|NP_541763.1| MarR family transcriptional regulat... 86.7 1e-15
gi|152986149|ref|YP_001349459.1| putative transcriptional regula... 86.7 1e-15
gi|319787841|ref|YP_004147316.1| regulatory protein MarR [Pseudo... 86.3 1e-15
gi|261753471|ref|ZP_05997180.1| transcriptional regulator [Bruce... 86.3 1e-15
gi|241203667|ref|YP_002974763.1| MarR family transcriptional reg... 86.3 1e-15
gi|298251680|ref|ZP_06975483.1| transcriptional regulator, MarR ... 86.3 2e-15
gi|306840602|ref|ZP_07473356.1| MarR family transcriptional regu... 85.9 2e-15
gi|260425490|ref|ZP_05779470.1| transcriptional regulator, MarR ... 85.9 2e-15
gi|335034708|ref|ZP_08528054.1| MarR family transcriptional regu... 85.9 2e-15
gi|163853195|ref|YP_001641238.1| regulatory protein MarR [Methyl... 85.5 2e-15
gi|171320970|ref|ZP_02909961.1| transcriptional regulator, MarR ... 85.5 3e-15
gi|218532025|ref|YP_002422841.1| MarR family transcriptional reg... 85.5 3e-15
gi|116251071|ref|YP_766909.1| MarR family transcriptional regula... 85.5 3e-15
gi|296446256|ref|ZP_06888203.1| transcriptional regulator, MarR ... 85.1 3e-15
gi|77465122|ref|YP_354625.1| MarR family transcriptional regulat... 85.1 3e-15
gi|126653975|ref|ZP_01725812.1| transcriptional regulator, MarR ... 85.1 3e-15
gi|221369125|ref|YP_002520221.1| Transcriptional regulator, MarR... 84.7 4e-15
gi|209548418|ref|YP_002280335.1| MarR family transcriptional reg... 84.7 4e-15
>gi|15608189|ref|NP_215565.1| transcriptional repressor protein [Mycobacterium tuberculosis
H37Rv]
gi|15840480|ref|NP_335517.1| MarR family transcriptional regulator [Mycobacterium tuberculosis
CDC1551]
gi|31792240|ref|NP_854733.1| transcriptional repressor protein [Mycobacterium bovis AF2122/97]
76 more sequence titles
Length=148
Score = 295 bits (755), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 148/148 (100%), Positives = 148/148 (100%), Gaps = 0/148 (0%)
Query 1 MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS 60
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS
Sbjct 1 MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS 60
Query 61 ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ 120
ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ
Sbjct 61 ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ 120
Query 121 AEVTASVGDWPRVRRDIANLGQAAEACR 148
AEVTASVGDWPRVRRDIANLGQAAEACR
Sbjct 121 AEVTASVGDWPRVRRDIANLGQAAEACR 148
>gi|289446630|ref|ZP_06436374.1| transcriptional repressor [Mycobacterium tuberculosis CPHL_A]
gi|289419588|gb|EFD16789.1| transcriptional repressor [Mycobacterium tuberculosis CPHL_A]
Length=148
Score = 293 bits (749), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 147/148 (99%), Positives = 147/148 (99%), Gaps = 0/148 (0%)
Query 1 MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS 60
MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS
Sbjct 1 MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS 60
Query 61 ELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ 120
ELAARIGVERTTLTRNLEVM RDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ
Sbjct 61 ELAARIGVERTTLTRNLEVMMRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQ 120
Query 121 AEVTASVGDWPRVRRDIANLGQAAEACR 148
AEVTASVGDWPRVRRDIANLGQAAEACR
Sbjct 121 AEVTASVGDWPRVRRDIANLGQAAEACR 148
>gi|258515958|ref|YP_003192180.1| transcriptional regulator, MarR family [Desulfotomaculum acetoxidans
DSM 771]
gi|257779663|gb|ACV63557.1| transcriptional regulator, MarR family [Desulfotomaculum acetoxidans
DSM 771]
Length=156
Score = 103 bits (257), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/121 (42%), Positives = 80/121 (67%), Gaps = 5/121 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C C+ R+A+R L Q YD+AL+P+ L TQFS L I+ E D+T+ +LA +G+
Sbjct 21 KCVCFNLRKASRLLSQIYDQALKPAHLKVTQFSLLMAIAGRE-----DITIGKLARPLGM 75
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTL+RN ++ + GL+ + G D R + I LT G +AL+KA+PLW G+Q +++ +G
Sbjct 76 DRTTLSRNARILEKKGLLIIEDGEDRRQQSIRLTEDGASALRKALPLWEGIQESLSSELG 135
Query 129 D 129
+
Sbjct 136 E 136
>gi|186686888|ref|YP_001870081.1| MarR family transcriptional regulator [Nostoc punctiforme PCC
73102]
gi|186469240|gb|ACC85040.1| transcriptional regulator, MarR family [Nostoc punctiforme PCC
73102]
Length=152
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/119 (43%), Positives = 78/119 (66%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CAC+ R+A+R + Q +D LRPSGL TQF+ LA +++++ + T++ELA + ++
Sbjct 20 CACFNLRKASRVMTQHFDEVLRPSGLLVTQFTILAAVAIAKSA-----TVNELAEILVMD 74
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTLTRNL+ + R+G ++ G D R + I LT G A L KA+PLW+ Q+ V ++G
Sbjct 75 RTTLTRNLKPLEREGWLKSEPGQDQRTRIIALTEAGEAVLAKALPLWKQAQSMVETALG 133
>gi|333986031|ref|YP_004515241.1| MarR family transcriptional regulator [Methylomonas methanica
MC09]
gi|333810072|gb|AEG02742.1| transcriptional regulator, MarR family [Methylomonas methanica
MC09]
Length=145
Score = 100 bits (249), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 76/120 (64%), Gaps = 5/120 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C + R+A R + Q YD LRP+G+ TQ+S L + LS + +++LA + +
Sbjct 11 DCTGFNLRKANRAVSQFYDDMLRPAGIRGTQYSLLVAVKLSG-----PVVVTKLAEYVVM 65
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTLTRNLE++ + GLV+V +G D R + I +TA+G A L KA PLW QA++ A VG
Sbjct 66 DRTTLTRNLEILGKQGLVKVSSGDDRRTRMISITAQGLAVLAKAYPLWEQAQAKIKAEVG 125
>gi|53803001|ref|YP_115207.1| MarR family transcriptional regulator [Methylococcus capsulatus
str. Bath]
gi|53756762|gb|AAU91053.1| transcriptional regulator, MarR family [Methylococcus capsulatus
str. Bath]
Length=137
Score = 96.7 bits (239), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 76/120 (64%), Gaps = 5/120 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C + R+A R +GQ YD ALRP+GL TQFS LA + AG +T+S LA +
Sbjct 2 DCTGFNLRKAMRAVGQHYDDALRPAGLRGTQFSLLAAAKI----AG-PVTVSRLAEMAVM 56
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTLTRNL V+ + GLV V+ GAD R +R+ +T +G L++A PLW+ Q + A +G
Sbjct 57 DRTTLTRNLNVLEKQGLVAVVPGADRRTRRVVITERGVTVLRQAYPLWQQAQDRLAAKLG 116
>gi|301064445|ref|ZP_07204864.1| transcriptional regulator, MarR family [delta proteobacterium
NaphS2]
gi|300441455|gb|EFK05801.1| transcriptional regulator, MarR family [delta proteobacterium
NaphS2]
Length=147
Score = 95.5 bits (236), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/119 (43%), Positives = 75/119 (64%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CAC+ RRAAR + Q +DR LR SG+T QFS L + E + +++LA +G+E
Sbjct 16 CACFNLRRAARLVTQRFDRILRESGITANQFSILMAVYDRE-----RILLTKLAGVLGME 70
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTL+RN+ ++ R G++ AG+D R + I +T +G L+KA+PLW+ Q EV +G
Sbjct 71 RTTLSRNVSLLTRMGMISTEAGSDRRQRNIIITKEGIILLEKALPLWQRAQREVVDVIG 129
>gi|196234654|ref|ZP_03133470.1| transcriptional regulator, MarR family [Chthoniobacter flavus
Ellin428]
gi|196221278|gb|EDY15832.1| transcriptional regulator, MarR family [Chthoniobacter flavus
Ellin428]
Length=150
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/135 (39%), Positives = 76/135 (57%), Gaps = 7/135 (5%)
Query 5 AAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAA 64
+A + C C+ R AR++ Q +D LR G+ TQ S L + E TM+EL+
Sbjct 12 SAPENCVCFNLRWVARKVTQFFDAELRRHGIRPTQESILVSLDAKE-----KWTMAELSD 66
Query 65 RIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVT 124
+G+ERTTL RNL ++RDGLV+VM G + +T KGR L+K +P WR Q+ V
Sbjct 67 WLGMERTTLVRNLRPLQRDGLVKVMGGGRGNLVELTITPKGREQLEKLMPAWRAAQSAVV 126
Query 125 ASVGD--WPRVRRDI 137
++G+ W V D+
Sbjct 127 KTLGEQRWSAVLSDL 141
>gi|225569515|ref|ZP_03778540.1| hypothetical protein CLOHYLEM_05608 [Clostridium hylemonae DSM
15053]
gi|225161723|gb|EEG74342.1| hypothetical protein CLOHYLEM_05608 [Clostridium hylemonae DSM
15053]
Length=135
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 73/120 (61%), Gaps = 7/120 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVIS-LSEGSAGIDLTMSELAARIGV 68
C C RRAA + YDRAL P+G+T QFS L +S L GS +SELAA +G+
Sbjct 8 CYCIGIRRAANAVTSFYDRALEPTGITVNQFSLLMNLSRLGSGS------ISELAAYVGL 61
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
ERTTLTR L+ + G ++ ++ R K+++LT+ G+ L K +PLW Q+E+ A +G
Sbjct 62 ERTTLTRTLKPLTERGFIKDVSEKGRRDKKLQLTSLGKETLNKGIPLWESAQSEIEARLG 121
>gi|159898527|ref|YP_001544774.1| MarR family transcriptional regulator [Herpetosiphon aurantiacus
DSM 785]
gi|159891566|gb|ABX04646.1| transcriptional regulator, MarR family [Herpetosiphon aurantiacus
DSM 785]
Length=144
Score = 94.0 bits (232), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/119 (43%), Positives = 76/119 (64%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CAC R+ AR + QAYD AL+ +GL +QF+ LA ++ G +G M +LA +G++
Sbjct 12 CACANLRKTARLVTQAYDDALKETGLHCSQFTLLATLA-QIGPSG----MGQLAEALGMD 66
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTLTRNL+ ++RDGLV D R +++ +T +G AAL+ A+PLW+ Q V +G
Sbjct 67 RTTLTRNLQALQRDGLVEDQPDGDKRRRQVAITTRGVAALEAALPLWQQAQKRVVVVLG 125
>gi|307728750|ref|YP_003905974.1| regulatory protein MarR [Burkholderia sp. CCGE1003]
gi|307583285|gb|ADN56683.1| regulatory protein MarR [Burkholderia sp. CCGE1003]
Length=149
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 70/120 (59%), Gaps = 5/120 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C C R A R L AYD LRPSGL TQFS LA SA ++++SELA + +
Sbjct 5 QCNCSFLRSATRALSLAYDEVLRPSGLRITQFSMLA-----RASAVGEMSLSELADLMAM 59
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTL RNL+ + R+GLV++ G D R + + +T GR L +A+PLW V +G
Sbjct 60 DRTTLGRNLQPLEREGLVQINVGQDRRERLVSVTPAGRKVLARAMPLWESVHLRFEQKLG 119
>gi|323138966|ref|ZP_08074027.1| transcriptional regulator, MarR family [Methylocystis sp. ATCC
49242]
gi|322395812|gb|EFX98352.1| transcriptional regulator, MarR family [Methylocystis sp. ATCC
49242]
Length=146
Score = 93.6 bits (231), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/137 (41%), Positives = 78/137 (57%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C T+RAARQL + +DRA P GLTN QFS + ++ + T+ +LA +
Sbjct 15 DSCLCLATQRAARQLARRFDRAFAPVGLTNGQFSLMMALNAPQAP-----TVGKLAEFLA 69
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
++RTTLT L+ + R GLV V+A D R +R+ LT GR AL AVP+WR A +
Sbjct 70 MDRTTLTAALKSLERRGLVAVVADEKDKRARRLSLTQAGREALATAVPIWRETHAALQKE 129
Query 127 V--GDWPRVRRDIANLG 141
+ GD +R + LG
Sbjct 130 LAQGDAEALRMSLGKLG 146
>gi|258593074|emb|CBE69385.1| Transcriptional regulator, MarR family [NC10 bacterium 'Dutch
sediment']
Length=138
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/119 (43%), Positives = 73/119 (62%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CAC + R+AAR + + YD L+PSGL TQF+ L V++ S GS T++ L + ++
Sbjct 4 CACSSIRKAARAVTELYDGILKPSGLRVTQFALLHVLA-SAGST----TITRLGQILVID 58
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTT+TRNL+ + GL+ + AG D R + + LT GR AL KA+PLW Q V +G
Sbjct 59 RTTMTRNLKPLVNQGLITIEAGQDQRTRVVTLTPSGREALAKALPLWEKAQTRVVEGLG 117
>gi|116748583|ref|YP_845270.1| MarR family transcriptional regulator [Syntrophobacter fumaroxidans
MPOB]
gi|116697647|gb|ABK16835.1| transcriptional regulator, MarR family [Syntrophobacter fumaroxidans
MPOB]
Length=153
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 73/120 (61%), Gaps = 5/120 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CACY+ R+AAR + + YD LRPSGL TQFS L + +T++ LA ++
Sbjct 21 CACYSLRKAARAVTRLYDDFLRPSGLRVTQFSVLMTARIRAP-----ITLTRLAHLTVMD 75
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGD 129
RTTLTRNL+V+ + L++ G D R +++ LT G L +A+PLW Q+ +T+ +G+
Sbjct 76 RTTLTRNLKVLEKKKLIKTEPGEDRRERQVRLTDLGEEKLVEAIPLWEEAQSRITSGLGE 135
>gi|170695022|ref|ZP_02886171.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
gi|170140120|gb|EDT08299.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
Length=149
Score = 92.0 bits (227), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/120 (45%), Positives = 69/120 (58%), Gaps = 5/120 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C C R A R L QAYD LRPSGL TQFS LA SA ++++SELA + +
Sbjct 5 QCNCSFLRSATRALTQAYDEVLRPSGLRMTQFSMLA-----RASAVGEISLSELADLMAM 59
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTL RNL + R+GLV+V G D R + + +T G AL A+PLW V VG
Sbjct 60 DRTTLGRNLRPLEREGLVQVDIGEDRRERLVTVTPAGAKALASALPLWEQVHQRFERKVG 119
>gi|163795963|ref|ZP_02189926.1| transcriptional regulator, MarR family protein [alpha proteobacterium
BAL199]
gi|159178718|gb|EDP63256.1| transcriptional regulator, MarR family protein [alpha proteobacterium
BAL199]
Length=157
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/119 (43%), Positives = 75/119 (64%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C RR AR++ Q YD AL+P+GL TQ+S LA ++ AG D ++++LA R+ ++
Sbjct 23 CTCAALRRTARRMTQIYDDALKPTGLKLTQYSLLATLA----QAG-DPSITDLAERMMMD 77
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTLTRNL ++ G VR+ G D R + + LTA+G AL+ A P+WR + + +G
Sbjct 78 RTTLTRNLRPLQSAGWVRLGKGEDKRSRMVVLTAEGEWALESARPIWRQAEKSIREKLG 136
>gi|170695037|ref|ZP_02886186.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
gi|170140135|gb|EDT08314.1| transcriptional regulator, MarR family [Burkholderia graminis
C4D1M]
Length=149
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/120 (43%), Positives = 69/120 (58%), Gaps = 5/120 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C C R A R L AYD LRPSGL TQFS LA SA +++SELA + +
Sbjct 5 QCNCSFLRSATRALSLAYDEVLRPSGLRITQFSMLA-----RASAVGKMSLSELADLMAM 59
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+RTTL RNL+ + R+GLV++ G D R + + +T +GR L A+PLW V +G
Sbjct 60 DRTTLGRNLQPLEREGLVQINVGDDKRERLVSVTLEGRKLLACALPLWESVHLRFEQKLG 119
>gi|169335361|ref|ZP_02862554.1| hypothetical protein ANASTE_01773 [Anaerofustis stercorihominis
DSM 17244]
gi|169258099|gb|EDS72065.1| hypothetical protein ANASTE_01773 [Anaerofustis stercorihominis
DSM 17244]
Length=143
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/119 (37%), Positives = 69/119 (58%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C RRAA + + YD L+ +GLT QFS L I E ++ +SE+A ++G+E
Sbjct 9 CYCINFRRAANSITKYYDNYLKKAGLTINQFSLLKNILKIEPAS-----VSEIAVKVGLE 63
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTT+ RNL+ + ++ L+ ++ R K++ LT KG+ L A+PLW Q ++ +G
Sbjct 64 RTTVVRNLKSLFKERLIEDISEKFERNKKVRLTEKGKKTLNSAIPLWEEAQKDIENKIG 122
>gi|322435396|ref|YP_004217608.1| MarR family transcriptional regulator [Acidobacterium sp. MP5ACTX9]
gi|321163123|gb|ADW68828.1| transcriptional regulator, MarR family [Acidobacterium sp. MP5ACTX9]
Length=153
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/107 (46%), Positives = 64/107 (60%), Gaps = 5/107 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C CY R++AR + YDR L PSGL QF LA ++ G T+S LAA + ++
Sbjct 12 CTCYRLRQSARLTTRLYDRHLAPSGLNIGQFGILATLAAMHGQ-----TISNLAAVLQLD 66
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLW 116
RTTLTRNL +++ GLV V G D R + + LT GR AL +A PLW
Sbjct 67 RTTLTRNLLPLQKLGLVEVEPGPDKRARSLSLTQPGREALAQAKPLW 113
>gi|170746528|ref|YP_001752788.1| MarR family transcriptional regulator [Methylobacterium radiotolerans
JCM 2831]
gi|170653050|gb|ACB22105.1| transcriptional regulator, MarR family [Methylobacterium radiotolerans
JCM 2831]
Length=138
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/140 (41%), Positives = 76/140 (55%), Gaps = 14/140 (10%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
+ C C RRA R L +YD AL+P+GL TQF+ L + + +S LAA
Sbjct 7 EPCTCSALRRATRALTASYDAALKPTGLRVTQFAILRHLDRLG-----PVPVSRLAAEAA 61
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+ERTT+ RNL+ ++R GLV + G AD R +R+ LTA GR AL A P WR Q+ + A
Sbjct 62 LERTTMGRNLDPLKRRGLVAITPGAADPRERRVSLTASGREALAAATPYWREAQSRINAR 121
Query 127 VGDWPRVRRDIANLGQAAEA 146
V D A + AEA
Sbjct 122 V--------DPATVSAVAEA 133
>gi|154250667|ref|YP_001411491.1| MarR family transcriptional regulator [Parvibaculum lavamentivorans
DS-1]
gi|154154617|gb|ABS61834.1| transcriptional regulator, MarR family [Parvibaculum lavamentivorans
DS-1]
Length=145
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/134 (40%), Positives = 84/134 (63%), Gaps = 6/134 (4%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
+ CA R AAR+L +AYD+AL+PSGL TQF+ L I+++EGSA +M+ LA +
Sbjct 13 ENCAALRARMAARKLTRAYDKALKPSGLKITQFTLL--IAIAEGSAK---SMTALADHLA 67
Query 68 VERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASV 127
+ER++L RN++++ DGL+ + R + LT GR L +A+PLWR Q +V ++
Sbjct 68 LERSSLVRNVKLLEDDGLIEAAPTGEGRSLGLVLTKAGRKKLTQALPLWRKAQDDVETAL 127
Query 128 G-DWPRVRRDIANL 140
G +W V++ + L
Sbjct 128 GANWTGVKKSLQQL 141
>gi|148557383|ref|YP_001264965.1| MarR family transcriptional regulator [Sphingomonas wittichii
RW1]
gi|148502573|gb|ABQ70827.1| transcriptional regulator, MarR family [Sphingomonas wittichii
RW1]
Length=146
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/150 (42%), Positives = 83/150 (56%), Gaps = 15/150 (10%)
Query 1 MGKGAAFD-------ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSA 53
M K FD C C +RAAR L + +D ALRP GLTN QFS L +SL+ A
Sbjct 1 MSKPVPFDTTLHVRDHCLCLHAQRAARVLARRFDEALRPVGLTNQQFSLL--MSLNRPQA 58
Query 54 GIDLTMSELAARIGVERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKA 112
T+ +A +G++RTTLT L+ + R GL ++ AD R + I LT G A L +A
Sbjct 59 P---TIGVVAELLGMDRTTLTAALKPLERRGLATIVVDPADRRGRNILLTPDGEALLAEA 115
Query 113 VPLWRGVQAEVTAS-VG-DWPRVRRDIANL 140
+P+WR A V S VG D R+RRD+ +
Sbjct 116 MPIWRDTHAAVERSMVGVDVDRLRRDLGTI 145
>gi|299535669|ref|ZP_07048990.1| MarR family transcriptional regulator [Lysinibacillus fusiformis
ZC1]
gi|298728869|gb|EFI69423.1| MarR family transcriptional regulator [Lysinibacillus fusiformis
ZC1]
Length=152
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/120 (36%), Positives = 71/120 (60%), Gaps = 6/120 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C R+ R + Q YD+ L+P+GL TQ+S LA I L + +++S L + ++
Sbjct 14 CVCANLRKKTRVVTQLYDKLLQPTGLKVTQYSMLAHIDLQQA-----VSISRLGEILQLD 68
Query 70 RTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+TT+TRN+ ++++ G V + DAR K+I LT KG L +A P+W+G+Q + +G
Sbjct 69 QTTVTRNINLLKQYGYVELKRDTKDARTKKITLTEKGLEKLHEAAPIWQGIQDRIIEDIG 128
>gi|298241329|ref|ZP_06965136.1| transcriptional regulator, MarR family [Ktedonobacter racemifer
DSM 44963]
gi|297554383|gb|EFH88247.1| transcriptional regulator, MarR family [Ktedonobacter racemifer
DSM 44963]
Length=147
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C T R AA+ L +AYDR L PSGL TQ+ L I E + ++++LA ++G +
Sbjct 14 CHCTTLRYAAQTLTEAYDRVLAPSGLKVTQYVLLRSILQEEA----EQSLTDLAQKLGSD 69
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVGD 129
R+T+ RN+ ++ RDGLV + G+D R + +T KGR A PLW+ QA V ++G+
Sbjct 70 RSTIGRNVRILARDGLVTLSRGSDRREHTVCVTQKGRETFSLATPLWQKSQAAVEETLGE 129
>gi|306845838|ref|ZP_07478406.1| MarR family transcriptional regulator [Brucella sp. BO1]
gi|306273730|gb|EFM55568.1| MarR family transcriptional regulator [Brucella sp. BO1]
Length=149
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/137 (39%), Positives = 81/137 (60%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP GLTN QFS + +SL+ S M +A +
Sbjct 17 DTCLCLHVQRAARALARLFDEALRPVGLTNGQFSLM--MSLNRPSPP---PMKPVAELLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V ++ AD R + ++LTA+G+A L AVP+W A++ A
Sbjct 72 MDQTTLTAALKPLQRQGWVEILINPADRRERLLQLTAEGKAVLASAVPIWTATHAQIEAR 131
Query 127 V--GDWPRVRRDIANLG 141
+ G+ +RRD+ L
Sbjct 132 LAGGNGDALRRDLIMLS 148
>gi|323525530|ref|YP_004227683.1| MarR family transcriptional regulator [Burkholderia sp. CCGE1001]
gi|323382532|gb|ADX54623.1| transcriptional regulator, MarR family [Burkholderia sp. CCGE1001]
Length=154
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/122 (41%), Positives = 73/122 (60%), Gaps = 6/122 (4%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D+C C+T R+AARQ+ + YD L+P GL TQF LA ++ E SA +++ L+ R+
Sbjct 11 DQCNCFTVRKAARQISRLYDSYLQPCGLRITQFLILATLNERE-SASVNV----LSERLD 65
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+ERT + + + V+ RDGLV V D R + +ELT +G ++A PLWR Q E +
Sbjct 66 IERTAMGKMIGVLERDGLVAVRPSPEDGRIRIVELTPEGTRLFERAAPLWREAQREFSLR 125
Query 127 VG 128
G
Sbjct 126 NG 127
>gi|146341546|ref|YP_001206594.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS
278]
gi|146194352|emb|CAL78376.1| putative transcriptional regulatory protein, MarR family [Bradyrhizobium
sp. ORS 278]
Length=143
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/135 (38%), Positives = 77/135 (58%), Gaps = 8/135 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C R+AARQ+ + YD A RP G+T+ QFS LA + E + + +A +G++
Sbjct 14 CVCLGVRKAARQVARRYDDAFRPLGITSGQFSILAALLRDEVAP-----LGAVAEVLGMD 68
Query 70 RTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTL RNL+ + ++ L+ A D R + + LT KGRA L +A+P+WR QA+ +
Sbjct 69 RTTLNRNLKPLEQEKLIATAATTEDRRVRGLVLTTKGRALLDRAIPIWRTAQADSERRLA 128
Query 129 --DWPRVRRDIANLG 141
DWP +R + L
Sbjct 129 AMDWPTLRSQLQALS 143
>gi|118587637|ref|ZP_01545047.1| Transcriptional Regulator, MarR family protein [Stappia aggregata
IAM 12614]
gi|118439259|gb|EAV45890.1| Transcriptional Regulator, MarR family protein [Stappia aggregata
IAM 12614]
Length=139
Score = 87.4 bits (215), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/122 (41%), Positives = 67/122 (55%), Gaps = 5/122 (4%)
Query 7 FDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARI 66
F C R+AAR + + YD+ R G+T QFS L I E D T +ELA R+
Sbjct 6 FSLCVLDNARKAARAVSRHYDKLARRVGMTPGQFSVLVTIHKYE-----DATTAELAERL 60
Query 67 GVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
++RTTL RN+ ++ R GLV D R K+ L+ KG L KA+PLWR QA+V
Sbjct 61 SMDRTTLVRNVALLERKGLVVSQLVQDGRSKQYRLSPKGAELLNKALPLWRRAQADVKDH 120
Query 127 VG 128
+G
Sbjct 121 LG 122
>gi|265985529|ref|ZP_06098264.1| transcriptional regulator [Brucella sp. 83/13]
gi|306838134|ref|ZP_07470991.1| MarR family transcriptional regulator [Brucella sp. NF 2653]
gi|264664121|gb|EEZ34382.1| transcriptional regulator [Brucella sp. 83/13]
gi|306406871|gb|EFM63093.1| MarR family transcriptional regulator [Brucella sp. NF 2653]
Length=149
Score = 87.0 bits (214), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/137 (39%), Positives = 81/137 (60%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP GLTN QFS + +SL+ S M +A +
Sbjct 17 DTCLCLHVQRAARALARLFDEALRPVGLTNGQFSLM--MSLNRPSPP---PMKPVAELLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V ++ AD R + ++LTA+G+A L AVP+W A++ A
Sbjct 72 MDQTTLTAALKPLQRRGWVEILINPADRRERLLQLTAEGKAVLASAVPIWTATHAQIEAR 131
Query 127 V--GDWPRVRRDIANLG 141
+ G+ +RRD+ L
Sbjct 132 LAGGNSDALRRDLIMLS 148
>gi|15888193|ref|NP_353874.1| MarR family transcriptional regulator [Agrobacterium tumefaciens
str. C58]
gi|15155841|gb|AAK86659.1| transcriptional regulator, MarR family [Agrobacterium tumefaciens
str. C58]
Length=148
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/137 (41%), Positives = 78/137 (57%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D AL+P+G+TN QFS L ++ E M +A +
Sbjct 17 DSCLCLHAQRAARALARLFDNALKPAGITNGQFSLLISLNRPEPPP-----MGPVANLLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
++RTTLT L+ + R GLVR+ D R KR+ LT +G A L A P+W AEV
Sbjct 72 MDRTTLTAALKPLERRGLVRIEPDPKDKRGKRLRLTPEGMAVLAVAFPIWEQTHAEVETK 131
Query 127 V--GDWPRVRRDIANLG 141
+ GD R+RRD+ +LG
Sbjct 132 IGSGDPGRLRRDLIDLG 148
>gi|296186448|ref|ZP_06854851.1| transcriptional regulator, MarR family [Clostridium carboxidivorans
P7]
gi|296048895|gb|EFG88326.1| transcriptional regulator, MarR family [Clostridium carboxidivorans
P7]
Length=145
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/122 (39%), Positives = 71/122 (59%), Gaps = 6/122 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+CAC R R + Q +D+A +P GL TQF+ LA IS E S T+ ELA +
Sbjct 12 DCACKNLRMTTRVVTQYFDKAFQPVGLRATQFALLADISSRESS-----TVGELADIFLM 66
Query 69 ERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTASV 127
++TT+TRN+E++++ G V V G D+R + I +T G L++A+PLW Q + V
Sbjct 67 DQTTVTRNIEILKKKGYVDVRQGEDDSRKRYISITESGFVKLREAIPLWNNAQLVIEQGV 126
Query 128 GD 129
G+
Sbjct 127 GE 128
>gi|209518571|ref|ZP_03267391.1| transcriptional regulator, MarR family [Burkholderia sp. H160]
gi|209501021|gb|EEA01057.1| transcriptional regulator, MarR family [Burkholderia sp. H160]
Length=140
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/129 (39%), Positives = 71/129 (56%), Gaps = 6/129 (4%)
Query 1 MGKGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMS 60
M + ++DEC C+ R+AAR + Q Y+R L GLT QF+ LA ++ + +L M+
Sbjct 1 MNRPLSYDECNCFALRQAARHVTQIYERHLGSVGLTAAQFTILAKLARTP-----NLPMA 55
Query 61 ELAARIGVERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGV 119
ELA + +ERTTL R ++ ++RDGLV+ A D R LT KG A +A WR
Sbjct 56 ELADAMVMERTTLVRAMKPLQRDGLVQAEAADHDNRTLLFSLTEKGEATFDQAAVAWRAA 115
Query 120 QAEVTASVG 128
Q E G
Sbjct 116 QDEFEKKFG 124
>gi|17989130|ref|NP_541763.1| MarR family transcriptional regulator [Brucella melitensis bv.
1 str. 16M]
gi|23500227|ref|NP_699667.1| MarR family transcriptional regulator [Brucella suis 1330]
gi|62317653|ref|YP_223506.1| MarR family transcriptional regulator [Brucella abortus bv. 1
str. 9-941]
70 more sequence titles
gi|83269636|ref|YP_418927.1| MarR family regulatory protein [Brucella melitensis biovar Abortus
2308]
gi|148558533|ref|YP_001257454.1| MarR family regulatory protein [Brucella ovis ATCC 25840]
gi|161620546|ref|YP_001594432.1| transcriptional regulator hosA [Brucella canis ATCC 23365]
gi|163844643|ref|YP_001622298.1| hypothetical protein BSUIS_B0480 [Brucella suis ATCC 23445]
gi|189022902|ref|YP_001932643.1| Bacterial regulatory protein, MarR family [Brucella abortus S19]
gi|225628919|ref|ZP_03786953.1| Transcriptional regulator hosA [Brucella ceti str. Cudo]
gi|225686281|ref|YP_002734253.1| transcriptional regulator hosA [Brucella melitensis ATCC 23457]
gi|237817200|ref|ZP_04596192.1| Transcriptional regulator hosA [Brucella abortus str. 2308 A]
gi|256015262|ref|YP_003105271.1| MarR family transcriptional regulator [Brucella microti CCM 4915]
gi|256262581|ref|ZP_05465113.1| bacterial regulatory protein [Brucella melitensis bv. 2 str.
63/9]
gi|260544884|ref|ZP_05820705.1| bacterial regulatory protein [Brucella abortus NCTC 8038]
gi|260564585|ref|ZP_05835070.1| bacterial regulatory protein [Brucella melitensis bv. 1 str.
16M]
gi|260568218|ref|ZP_05838687.1| bacterial regulatory protein [Brucella suis bv. 4 str. 40]
gi|260756749|ref|ZP_05869097.1| transcriptional regulator [Brucella abortus bv. 6 str. 870]
gi|260760179|ref|ZP_05872527.1| transcriptional regulator [Brucella abortus bv. 4 str. 292]
gi|260763417|ref|ZP_05875749.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59]
gi|260882564|ref|ZP_05894178.1| transcriptional regulator [Brucella abortus bv. 9 str. C68]
gi|261215939|ref|ZP_05930220.1| transcriptional regulator [Brucella abortus bv. 3 str. Tulya]
gi|261217104|ref|ZP_05931385.1| transcriptional regulator [Brucella ceti M13/05/1]
gi|261220318|ref|ZP_05934599.1| transcriptional regulator [Brucella ceti B1/94]
gi|261313447|ref|ZP_05952644.1| transcriptional regulator [Brucella pinnipedialis M163/99/10]
gi|261319315|ref|ZP_05958512.1| transcriptional regulator [Brucella pinnipedialis B2/94]
gi|261319975|ref|ZP_05959172.1| transcriptional regulator [Brucella ceti M644/93/1]
gi|261750198|ref|ZP_05993907.1| transcriptional regulator [Brucella suis bv. 5 str. 513]
gi|261756639|ref|ZP_06000348.1| bacterial regulatory protein [Brucella sp. F5/99]
gi|265986685|ref|ZP_06099242.1| transcriptional regulator [Brucella pinnipedialis M292/94/1]
gi|265989800|ref|ZP_06102357.1| transcriptional regulator [Brucella melitensis bv. 1 str. Rev.1]
gi|265993091|ref|ZP_06105648.1| transcriptional regulator [Brucella melitensis bv. 3 str. Ether]
gi|265996335|ref|ZP_06108892.1| transcriptional regulator [Brucella ceti M490/95/1]
gi|294853712|ref|ZP_06794384.1| organic hydroperoxide resistance transcriptional regulator [Brucella
sp. NVSL 07-0026]
gi|297249696|ref|ZP_06933397.1| organic hydroperoxide resistance transcriptional regulator [Brucella
abortus bv. 5 str. B3196]
gi|340792212|ref|YP_004757676.1| MarR family transcriptional regulator [Brucella pinnipedialis
B2/94]
gi|17984980|gb|AAL54027.1| transcriptional regulator, marr family [Brucella melitensis bv.
1 str. 16M]
gi|23463831|gb|AAN33672.1| transcriptional regulator, MarR family [Brucella suis 1330]
gi|62197846|gb|AAX76145.1| transcriptional regulator, MarR family [Brucella abortus bv.
1 str. 9-941]
gi|82939910|emb|CAJ12923.1| Bacterial regulatory protein, MarR family [Brucella melitensis
biovar Abortus 2308]
gi|148369818|gb|ABQ62690.1| bacterial regulatory protein, MarR family [Brucella ovis ATCC
25840]
gi|161337357|gb|ABX63661.1| Transcriptional regulator hosA [Brucella canis ATCC 23365]
gi|163675366|gb|ABY39476.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189021476|gb|ACD74197.1| Bacterial regulatory protein, MarR family [Brucella abortus S19]
gi|225616765|gb|EEH13813.1| Transcriptional regulator hosA [Brucella ceti str. Cudo]
gi|225642386|gb|ACO02299.1| Transcriptional regulator hosA [Brucella melitensis ATCC 23457]
gi|237788013|gb|EEP62229.1| Transcriptional regulator hosA [Brucella abortus str. 2308 A]
gi|255997922|gb|ACU49609.1| transcriptional regulator, MarR family [Brucella microti CCM
4915]
gi|260098155|gb|EEW82029.1| bacterial regulatory protein [Brucella abortus NCTC 8038]
gi|260152228|gb|EEW87321.1| bacterial regulatory protein [Brucella melitensis bv. 1 str.
16M]
gi|260154883|gb|EEW89964.1| bacterial regulatory protein [Brucella suis bv. 4 str. 40]
gi|260670497|gb|EEX57437.1| transcriptional regulator [Brucella abortus bv. 4 str. 292]
gi|260673838|gb|EEX60659.1| transcriptional regulator [Brucella abortus bv. 2 str. 86/8/59]
gi|260676857|gb|EEX63678.1| transcriptional regulator [Brucella abortus bv. 6 str. 870]
gi|260872092|gb|EEX79161.1| transcriptional regulator [Brucella abortus bv. 9 str. C68]
gi|260917546|gb|EEX84407.1| transcriptional regulator [Brucella abortus bv. 3 str. Tulya]
gi|260918902|gb|EEX85555.1| transcriptional regulator [Brucella ceti B1/94]
gi|260922193|gb|EEX88761.1| transcriptional regulator [Brucella ceti M13/05/1]
gi|261292665|gb|EEX96161.1| transcriptional regulator [Brucella ceti M644/93/1]
gi|261298538|gb|EEY02035.1| transcriptional regulator [Brucella pinnipedialis B2/94]
gi|261302473|gb|EEY05970.1| transcriptional regulator [Brucella pinnipedialis M163/99/10]
gi|261736623|gb|EEY24619.1| bacterial regulatory protein [Brucella sp. F5/99]
gi|261739951|gb|EEY27877.1| transcriptional regulator [Brucella suis bv. 5 str. 513]
gi|262550632|gb|EEZ06793.1| transcriptional regulator [Brucella ceti M490/95/1]
gi|262763961|gb|EEZ09993.1| transcriptional regulator [Brucella melitensis bv. 3 str. Ether]
gi|263000469|gb|EEZ13159.1| transcriptional regulator [Brucella melitensis bv. 1 str. Rev.1]
gi|263092366|gb|EEZ16619.1| bacterial regulatory protein [Brucella melitensis bv. 2 str.
63/9]
gi|264658882|gb|EEZ29143.1| transcriptional regulator [Brucella pinnipedialis M292/94/1]
gi|294819367|gb|EFG36367.1| organic hydroperoxide resistance transcriptional regulator [Brucella
sp. NVSL 07-0026]
gi|297173565|gb|EFH32929.1| organic hydroperoxide resistance transcriptional regulator [Brucella
abortus bv. 5 str. B3196]
gi|326410642|gb|ADZ67706.1| Bacterial regulatory protein, MarR family [Brucella melitensis
M28]
gi|326553934|gb|ADZ88573.1| Bacterial regulatory protein, MarR family [Brucella melitensis
M5-90]
gi|340560671|gb|AEK55908.1| transcriptional regulator, MarR family [Brucella pinnipedialis
B2/94]
gi|343384460|gb|AEM19951.1| MarR family transcriptional regulator [Brucella suis 1330]
Length=149
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/137 (38%), Positives = 81/137 (60%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP+GLTN QFS + +SL+ S M +A +
Sbjct 17 DTCLCLHVQRAARALARLFDEALRPAGLTNGQFSLM--MSLNRPSPP---PMKPVAELLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V ++ AD R + ++LTA+G+A L AVP+W A++ A
Sbjct 72 MDQTTLTAALKPLQRRGWVEILVNPADRRERLLQLTAEGKAVLASAVPIWTATHAQIEAR 131
Query 127 V--GDWPRVRRDIANLG 141
+ G+ +R D+ L
Sbjct 132 LAGGNGDALRHDLIMLS 148
>gi|152986149|ref|YP_001349459.1| putative transcriptional regulator [Pseudomonas aeruginosa PA7]
gi|150961307|gb|ABR83332.1| probable transcriptional regulator [Pseudomonas aeruginosa PA7]
Length=137
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/121 (39%), Positives = 71/121 (59%), Gaps = 5/121 (4%)
Query 9 ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGV 68
+C C RRAAR + + YD AL +GL QFS L + + ++SELA +G+
Sbjct 5 QCLCTKLRRAARSVSRFYDEALADTGLKVAQFSLLRHLQRLDRP-----SISELAEAMGL 59
Query 69 ERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+R+TL RNL V+ DGL+R+ G D R + +ELT G+AAL++ +P W Q + +G
Sbjct 60 DRSTLGRNLRVLENDGLLRLAGGEDQRNRLVELTPAGQAALERGLPAWEDAQRRLAGRLG 119
Query 129 D 129
+
Sbjct 120 E 120
>gi|319787841|ref|YP_004147316.1| regulatory protein MarR [Pseudoxanthomonas suwonensis 11-1]
gi|317466353|gb|ADV28085.1| regulatory protein MarR [Pseudoxanthomonas suwonensis 11-1]
Length=143
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/119 (44%), Positives = 69/119 (58%), Gaps = 7/119 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C+ RRAARQ+ Q YD AL +GL Q+S L + + G T+ LAA +G++
Sbjct 8 CTCFRLRRAARQVSQVYDHALAGAGLNVNQYSLLRHLR-TPG------TLGALAAHLGMD 60
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTTL+RNL + RDGLV G D R + + LTA GR + A PLWR Q + A +G
Sbjct 61 RTTLSRNLRPLLRDGLVADARGDDPRQRVLMLTAAGRERVASARPLWRRAQQRIDALLG 119
>gi|261753471|ref|ZP_05997180.1| transcriptional regulator [Brucella suis bv. 3 str. 686]
gi|261743224|gb|EEY31150.1| transcriptional regulator [Brucella suis bv. 3 str. 686]
Length=149
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/137 (38%), Positives = 81/137 (60%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP+GLTN QFS + +SL+ S M +A +
Sbjct 17 DTCLCLHVQRAARALARLFDEALRPAGLTNGQFSLM--MSLNRPSPP---PMKPVAELLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V ++ AD R + ++LTA+G+A L AVP+W A++ A
Sbjct 72 MDQTTLTAALKPLQRRGWVEILVNPADRRERLLQLTAEGKAVLASAVPIWTAAHAQIEAR 131
Query 127 V--GDWPRVRRDIANLG 141
+ G+ +R D+ L
Sbjct 132 LAGGNGDALRHDLIMLS 148
>gi|241203667|ref|YP_002974763.1| MarR family transcriptional regulator [Rhizobium leguminosarum
bv. trifolii WSM1325]
gi|240857557|gb|ACS55224.1| transcriptional regulator, MarR family [Rhizobium leguminosarum
bv. trifolii WSM1325]
Length=148
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/136 (37%), Positives = 78/136 (58%), Gaps = 8/136 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP+GLTN QFS + ++ E M +AA +
Sbjct 17 DTCLCLHVQRAARALARLFDDALRPAGLTNGQFSLMMSLNRPEPPP-----MGPVAALLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V+VM D R + + LT +G+A L +A+P+W A +
Sbjct 72 MDQTTLTAALKPLQRKGWVKVMENPRDRRGRLLSLTVEGKAVLARALPIWESTHAMIDGK 131
Query 127 VGDW--PRVRRDIANL 140
+ D R+R+D+ L
Sbjct 132 LPDGGAARLRQDLQAL 147
>gi|298251680|ref|ZP_06975483.1| transcriptional regulator, MarR family [Ktedonobacter racemifer
DSM 44963]
gi|297546272|gb|EFH80140.1| transcriptional regulator, MarR family [Ktedonobacter racemifer
DSM 44963]
Length=144
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/148 (38%), Positives = 83/148 (57%), Gaps = 8/148 (5%)
Query 1 MGKGAAFD--ECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLT 58
M + FD +C C R A R + Q YD L PSGL TQF+ LA L++ + ++
Sbjct 1 MARPDFFDVRQCVCAALRHADRAITQTYDEILAPSGLHITQFTLLA--GLAQAAP---IS 55
Query 59 MSELAARIGVERTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRG 118
++ LA +G++RTTLTRNL +R+ G VRV G D R + + LT +G+ L +A+P W+
Sbjct 56 INRLAELMGMDRTTLTRNLGPLRQQGWVRVEEGEDHRVRVVTLTEEGKQVLAQAMPFWQQ 115
Query 119 VQAEVTASVGDWPRVRRDIANLGQAAEA 146
Q ++ +G V +A L A E+
Sbjct 116 AQKQMIQQLG-LEHVEALLAELSTAVES 142
>gi|306840602|ref|ZP_07473356.1| MarR family transcriptional regulator [Brucella sp. BO2]
gi|306289402|gb|EFM60634.1| MarR family transcriptional regulator [Brucella sp. BO2]
Length=149
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/137 (38%), Positives = 80/137 (59%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP GLTN QFS + +SL+ S M +A +
Sbjct 17 DTCLCLHVQRAARALARLFDEALRPVGLTNGQFSLM--MSLNRPSPP---PMKPVAELLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V ++ AD R + ++LTA+G+ L AVP+W A++ A
Sbjct 72 MDQTTLTAALKPLQRRGWVEILVNPADRRERLLQLTAEGKVVLASAVPIWTATHAQIEAR 131
Query 127 V--GDWPRVRRDIANLG 141
+ G+ +RRD+ L
Sbjct 132 LAGGNGDALRRDLIMLS 148
>gi|260425490|ref|ZP_05779470.1| transcriptional regulator, MarR family [Citreicella sp. SE45]
gi|260423430|gb|EEX16680.1| transcriptional regulator, MarR family [Citreicella sp. SE45]
Length=148
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/111 (44%), Positives = 69/111 (63%), Gaps = 6/111 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D AL+P GLTN QFS L ++ E +S+LA +
Sbjct 15 DRCLCLRVQRAARNLARRFDTALKPFGLTNGQFSILMSLNRPEPP-----RISDLAPFLA 69
Query 68 VERTTLTRNLEVMRRDGLVRVMAG-ADARCKRIELTAKGRAALQKAVPLWR 117
++RTTLT +V+ R GLV +A +D R +R+ L+ GRA L++AVP+WR
Sbjct 70 MDRTTLTAAFKVLERRGLVDSLADPSDRRNRRLRLSDDGRALLKRAVPVWR 120
>gi|335034708|ref|ZP_08528054.1| MarR family transcriptional regulator [Agrobacterium sp. ATCC
31749]
gi|333793908|gb|EGL65259.1| MarR family transcriptional regulator [Agrobacterium sp. ATCC
31749]
Length=148
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/137 (41%), Positives = 78/137 (57%), Gaps = 8/137 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D AL+P+G+TN QFS L ++ E M +A +
Sbjct 17 DSCLCLHAQRAARALARLFDNALKPAGITNGQFSLLISLNRPEPPP-----MGPVANLLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
++RTTLT L+ + R GLVR+ D R KR+ LT +G A L A P+W AEV
Sbjct 72 MDRTTLTAALKPLERRGLVRIEPDPKDKRGKRLRLTPEGMAVLAVAFPIWEQTHAEVETK 131
Query 127 V--GDWPRVRRDIANLG 141
+ GD R+RRD+ ++G
Sbjct 132 IGSGDPGRLRRDLIDIG 148
>gi|163853195|ref|YP_001641238.1| regulatory protein MarR [Methylobacterium extorquens PA1]
gi|163664800|gb|ABY32167.1| regulatory protein MarR [Methylobacterium extorquens PA1]
Length=149
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (60%), Gaps = 6/120 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C + ++AAR +G+ YD ALRP+GL+N QF+ L ++ E T+S LA + +
Sbjct 19 CYSFAVQKAARAIGRRYDAALRPTGLSNWQFTLLMMLVREEPP-----TISALAQHLATD 73
Query 70 RTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTT+T NL+ + R GLV V A D R +R+ L+ +GR L +A PLW+ Q V +G
Sbjct 74 RTTITANLKPLERRGLVTVQGDAEDRRVRRVVLSDEGRTLLDEAYPLWQQAQETVARQLG 133
>gi|171320970|ref|ZP_02909961.1| transcriptional regulator, MarR family [Burkholderia ambifaria
MEX-5]
gi|171093765|gb|EDT38905.1| transcriptional regulator, MarR family [Burkholderia ambifaria
MEX-5]
Length=152
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/127 (36%), Positives = 71/127 (56%), Gaps = 6/127 (4%)
Query 3 KGAAFDECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSEL 62
+ D+C C+T R+AARQ+ + YD L+PSGL TQF LA ++ + +++ L
Sbjct 6 QSVGVDQCNCFTVRKAARQISRLYDEHLQPSGLRITQFLILATLNERRRA-----SVNAL 60
Query 63 AARIGVERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQA 121
A R+ +ERT + + + V+ RDG V + D R + +ELT +G ++A PLWR Q
Sbjct 61 AERLDIERTAMGKMVGVLERDGFVTMRPSPEDGRVRIVELTPEGSKLFERATPLWREAQH 120
Query 122 EVTASVG 128
+ G
Sbjct 121 RFSVLNG 127
>gi|218532025|ref|YP_002422841.1| MarR family transcriptional regulator [Methylobacterium chloromethanicum
CM4]
gi|218524328|gb|ACK84913.1| transcriptional regulator, MarR family [Methylobacterium chloromethanicum
CM4]
Length=149
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 71/120 (60%), Gaps = 6/120 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C + ++AAR +G+ YD ALRP+GL+N QF+ L ++ E T+S LA + +
Sbjct 19 CYSFAAQKAARAIGRRYDAALRPTGLSNWQFTLLMMLVREEPP-----TISALAQHLATD 73
Query 70 RTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
RTT+T NL+ + R GLV V A D R +R+ L+ +GR L +A PLW+ Q V +G
Sbjct 74 RTTITANLKPLERRGLVTVQGDAEDRRVRRVVLSDEGRTLLDEAYPLWQQAQETVARQLG 133
>gi|116251071|ref|YP_766909.1| MarR family transcriptional regulator [Rhizobium leguminosarum
bv. viciae 3841]
gi|115255719|emb|CAK06800.1| putative MarR family transcriptional regulator [Rhizobium leguminosarum
bv. viciae 3841]
Length=148
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/136 (38%), Positives = 76/136 (56%), Gaps = 8/136 (5%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP+GLTN QFS + ++ E M +AA +
Sbjct 17 DTCLCLHVQRAARALARLFDDALRPAGLTNGQFSLMMSLNRPEPPP-----MGPVAALLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V+VM D R + + LT G+A L KA+P+W A +
Sbjct 72 MDQTTLTAALKPLQRKGWVKVMENPRDRRGRLLSLTPDGKAVLAKALPIWECTHAMIDGK 131
Query 127 V--GDWPRVRRDIANL 140
+ G R+R D+ L
Sbjct 132 LPEGGAARLREDLQAL 147
>gi|296446256|ref|ZP_06888203.1| transcriptional regulator, MarR family [Methylosinus trichosporium
OB3b]
gi|296256293|gb|EFH03373.1| transcriptional regulator, MarR family [Methylosinus trichosporium
OB3b]
Length=156
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/119 (42%), Positives = 68/119 (58%), Gaps = 5/119 (4%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
CA RRA R +G+ Y + GL TQ+S L +L+EG+ T+ +LA +E
Sbjct 17 CAAANVRRAGRAVGRLYAESFAEIGLEPTQYSLLVACTLAEGA-----TVGKLAEVFLLE 71
Query 70 RTTLTRNLEVMRRDGLVRVMAGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
R+ L RNL VM + GL+RV G D R +++ LTAKGR L A+P WR QA+ + G
Sbjct 72 RSALARNLAVMEKRGLLRVKPGEDRRTRKVFLTAKGRTTLAAALPRWREAQAKAEKAFG 130
>gi|77465122|ref|YP_354625.1| MarR family transcriptional regulator [Rhodobacter sphaeroides
2.4.1]
gi|126464577|ref|YP_001045690.1| MarR family transcriptional regulator [Rhodobacter sphaeroides
ATCC 17029]
gi|77389540|gb|ABA80724.1| transcriptional regulator, MarR family [Rhodobacter sphaeroides
2.4.1]
gi|126106388|gb|ABN78918.1| transcriptional regulator, MarR family [Rhodobacter sphaeroides
ATCC 17029]
Length=154
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/142 (39%), Positives = 77/142 (55%), Gaps = 12/142 (8%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D A RP GL + QFS L ++ E A M+E+A +
Sbjct 20 DRCLCLGAQRAARTLARHFDEAFRPFGLRSGQFSLLVALNRPEPPA-----MAEVAEVLA 74
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
V+RTTLT L+ + R GL++V A D R +R+ LT GR L +A+P+W A +
Sbjct 75 VDRTTLTAALKPLERRGLLQVRPDAGDRRLRRLALTEAGRGLLGRAIPVWEETMAALERG 134
Query 127 VGDWPRVRRDIANLGQAAEACR 148
+G RD ++L EA R
Sbjct 135 IG------RDPSDLAAGLEALR 150
>gi|126653975|ref|ZP_01725812.1| transcriptional regulator, MarR family protein [Bacillus sp.
B14905]
gi|126589532|gb|EAZ83674.1| transcriptional regulator, MarR family protein [Bacillus sp.
B14905]
Length=152
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 70/120 (59%), Gaps = 6/120 (5%)
Query 10 CACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIGVE 69
C C R+ R + Q YD+ L+P+GL TQ+S LA I L + +++S L + ++
Sbjct 14 CVCANLRKKTRVVTQLYDKLLQPTGLKVTQYSMLAHIDLQQA-----VSISRLGEILLLD 68
Query 70 RTTLTRNLEVMRRDGLVRVM-AGADARCKRIELTAKGRAALQKAVPLWRGVQAEVTASVG 128
+TT+TRN+ ++++ G V + DAR K I LT KG L +A P+W+ +Q ++ +G
Sbjct 69 QTTVTRNINLLKQYGYVELKRDPHDARTKNIMLTEKGLEKLHEAAPIWKTIQDKIVDDIG 128
>gi|221369125|ref|YP_002520221.1| Transcriptional regulator, MarR family [Rhodobacter sphaeroides
KD131]
gi|221162177|gb|ACM03148.1| Transcriptional regulator, MarR family [Rhodobacter sphaeroides
KD131]
Length=154
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/142 (39%), Positives = 77/142 (55%), Gaps = 12/142 (8%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D A RP GL + QFS L ++ E A M+E+A +
Sbjct 20 DRCLCLGAQRAARTLARHFDEAFRPLGLRSGQFSLLVALNRPEPPA-----MAEVAEVLA 74
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
V+RTTLT L+ + R GL++V A D R +R+ LT GR L +A+P+W A +
Sbjct 75 VDRTTLTAALKPLERRGLLQVRPDAGDRRLRRLALTEAGRGLLGRAIPVWEETMAALERG 134
Query 127 VGDWPRVRRDIANLGQAAEACR 148
+G RD ++L EA R
Sbjct 135 IG------RDPSDLAAGLEALR 150
>gi|209548418|ref|YP_002280335.1| MarR family transcriptional regulator [Rhizobium leguminosarum
bv. trifolii WSM2304]
gi|209534174|gb|ACI54109.1| transcriptional regulator, MarR family [Rhizobium leguminosarum
bv. trifolii WSM2304]
Length=171
Score = 84.7 bits (208), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/133 (38%), Positives = 78/133 (59%), Gaps = 8/133 (6%)
Query 8 DECACYTTRRAARQLGQAYDRALRPSGLTNTQFSTLAVISLSEGSAGIDLTMSELAARIG 67
D C C +RAAR L + +D ALRP+GLTN QFS + ++ E M +AA +
Sbjct 17 DTCLCLHVQRAARALARLFDDALRPAGLTNGQFSLMMSLNRPEPPP-----MGPVAALLA 71
Query 68 VERTTLTRNLEVMRRDGLVRVMAGA-DARCKRIELTAKGRAALQKAVPLWRGVQAEVTAS 126
+++TTLT L+ ++R G V VM D R + + LT G+AAL +A+P+W+ A + +
Sbjct 72 MDQTTLTAALKPLQRKGWVTVMENPKDRRGRLLGLTPDGKAALAEALPIWKSTHAALDDA 131
Query 127 V--GDWPRVRRDI 137
+ G R+R+D+
Sbjct 132 LPEGGPARLRQDL 144
Lambda K H
0.321 0.131 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Effective search space used: 130586878330
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
Posted date: Sep 5, 2011 4:36 AM
Number of letters in database: 5,219,829,388
Number of sequences in database: 15,229,318
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40