BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1057 Length=393 Score E Sequences producing significant alignments: (Bits) Value gi|308231716|ref|ZP_07413536.2| hypothetical protein TMAG_01000 ... 778 0.0 gi|148822266|ref|YP_001287020.1| hypothetical protein TBFG_11075... 777 0.0 gi|15840490|ref|NP_335527.1| hypothetical protein MT1087 [Mycoba... 777 0.0 gi|15608197|ref|NP_215573.1| hypothetical protein Rv1057 [Mycoba... 776 0.0 gi|340626068|ref|YP_004744520.1| hypothetical protein MCAN_10631... 776 0.0 gi|289442484|ref|ZP_06432228.1| conserved hypothetical protein [... 565 4e-159 gi|118616115|ref|YP_904447.1| hypothetical protein MUL_0230 [Myc... 419 4e-115 gi|240170309|ref|ZP_04748968.1| hypothetical protein MkanA1_1343... 418 6e-115 gi|183984384|ref|YP_001852675.1| hypothetical protein MMAR_4413 ... 417 1e-114 gi|342861652|ref|ZP_08718298.1| hypothetical protein MCOL_22301 ... 352 7e-95 gi|254822126|ref|ZP_05227127.1| hypothetical protein MintA_19482... 340 2e-91 gi|41407105|ref|NP_959941.1| hypothetical protein MAP1007 [Mycob... 335 6e-90 gi|336461471|gb|EGO40341.1| YVTN family beta-propeller repeat pr... 335 7e-90 gi|118466241|ref|YP_880431.1| hypothetical protein MAV_1185 [Myc... 317 3e-84 gi|296169926|ref|ZP_06851535.1| conserved hypothetical protein [... 310 4e-82 gi|333989648|ref|YP_004522262.1| hypothetical protein JDM601_100... 191 1e-46 gi|118473416|ref|YP_889554.1| hypothetical protein MSMEG_5308 [M... 161 1e-37 gi|108801143|ref|YP_641340.1| hypothetical protein Mmcs_4179 [My... 147 3e-33 gi|120405651|ref|YP_955480.1| hypothetical protein Mvan_4699 [My... 141 2e-31 gi|315443077|ref|YP_004075956.1| hypothetical protein Mspyr1_144... 138 2e-30 gi|145222612|ref|YP_001133290.1| hypothetical protein Mflv_2024 ... 134 2e-29 gi|271966436|ref|YP_003340632.1| YVTN beta-propeller repeat-cont... 95.5 2e-17 gi|345013898|ref|YP_004816252.1| 40-residue YVTN family beta-pro... 93.6 5e-17 gi|21228572|ref|NP_634494.1| putative surface layer protein [Met... 92.8 1e-16 gi|15082090|gb|AAK84029.1|AF394229_1 surface antigen [Methanosar... 91.7 2e-16 gi|1213021|emb|CAA59198.1| unnamed protein product [Methanosarci... 90.9 3e-16 gi|345134863|dbj|BAK64644.1| spiroacetal synthase [Streptomyces ... 89.7 8e-16 gi|20090753|ref|NP_616828.1| hypothetical protein MA1904 [Methan... 89.4 1e-15 gi|229155904|ref|ZP_04284005.1| 40-residue YVTN family beta-prop... 88.2 2e-15 gi|229017757|ref|ZP_04174645.1| 40-residue YVTN family beta-prop... 87.4 4e-15 gi|73670899|ref|YP_306914.1| hypothetical protein Mbar_A3461 [Me... 86.7 6e-15 gi|254381507|ref|ZP_04996871.1| conserved hypothetical protein [... 86.7 7e-15 gi|258590947|emb|CBE67242.1| conserved hypothetical protein; put... 85.1 2e-14 gi|21229128|ref|NP_635050.1| hypothetical protein MM_3026 [Metha... 85.1 2e-14 gi|49477792|ref|YP_036719.1| hypothetical protein BT9727_2393 [B... 84.7 2e-14 gi|42781416|ref|NP_978663.1| triple helix repeat-containing coll... 84.7 2e-14 gi|24987493|pdb|1L0Q|A Chain A, Tandem Yvtn Beta-Propeller And P... 83.6 5e-14 gi|21228830|ref|NP_634752.1| hypothetical protein MM_2728 [Metha... 83.2 7e-14 gi|254390941|ref|ZP_05006151.1| 40-residue YVTN family beta-prop... 83.2 8e-14 gi|228985412|ref|ZP_04145571.1| 40-residue YVTN family beta-prop... 82.8 9e-14 gi|134099853|ref|YP_001105514.1| putative surface layer protein ... 82.8 1e-13 gi|294816555|ref|ZP_06775197.1| 40-residue YVTN family beta-prop... 82.4 1e-13 gi|258590983|emb|CBE67278.1| conserved hypothetical protein; put... 82.4 1e-13 gi|296268098|ref|YP_003650730.1| 40-residue YVTN family beta-pro... 82.4 1e-13 gi|229051556|ref|ZP_04195033.1| 40-residue YVTN family beta-prop... 82.0 2e-13 gi|282163597|ref|YP_003355982.1| putative cell surface protein [... 81.6 2e-13 gi|296268105|ref|YP_003650737.1| 40-residue YVTN family beta-pro... 81.3 2e-13 gi|229178923|ref|ZP_04306282.1| 40-residue YVTN family beta-prop... 81.3 3e-13 gi|229070103|ref|ZP_04203370.1| 40-residue YVTN family beta-prop... 80.5 5e-13 gi|73668352|ref|YP_304367.1| putative surface layer protein [Met... 80.1 5e-13 >gi|308231716|ref|ZP_07413536.2| hypothetical protein TMAG_01000 [Mycobacterium tuberculosis SUMu001] gi|308370079|ref|ZP_07420219.2| hypothetical protein TMBG_01553 [Mycobacterium tuberculosis SUMu002] gi|308370598|ref|ZP_07422084.2| hypothetical protein TMCG_00679 [Mycobacterium tuberculosis SUMu003] 15 more sequence titles Length=445 Score = 778 bits (2009), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT Sbjct 53 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 112 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 113 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 172 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 173 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 232 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 233 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 292 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 293 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 352 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA Sbjct 353 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 412 Query 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA Sbjct 413 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 445 >gi|148822266|ref|YP_001287020.1| hypothetical protein TBFG_11075 [Mycobacterium tuberculosis F11] gi|167967666|ref|ZP_02549943.1| surface antigen, putative [Mycobacterium tuberculosis H37Ra] gi|253799907|ref|YP_003032908.1| hypothetical protein TBMG_02929 [Mycobacterium tuberculosis KZN 1435] 18 more sequence titles Length=410 Score = 777 bits (2007), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT Sbjct 18 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 77 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 78 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 137 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 138 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 197 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 198 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 257 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 258 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 317 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA Sbjct 318 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 377 Query 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA Sbjct 378 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 410 >gi|15840490|ref|NP_335527.1| hypothetical protein MT1087 [Mycobacterium tuberculosis CDC1551] gi|13880664|gb|AAK45341.1| surface antigen, putative [Mycobacterium tuberculosis CDC1551] Length=460 Score = 777 bits (2006), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT Sbjct 68 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 127 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 128 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 187 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 188 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 247 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 248 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 307 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 308 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 367 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA Sbjct 368 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 427 Query 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA Sbjct 428 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 460 >gi|15608197|ref|NP_215573.1| hypothetical protein Rv1057 [Mycobacterium tuberculosis H37Rv] gi|31792248|ref|NP_854741.1| hypothetical protein Mb1086 [Mycobacterium bovis AF2122/97] gi|121636986|ref|YP_977209.1| hypothetical protein BCG_1115 [Mycobacterium bovis BCG str. Pasteur 1173P2] 35 more sequence titles Length=393 Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/393 (100%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT Sbjct 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA Sbjct 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 Query 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA Sbjct 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 >gi|340626068|ref|YP_004744520.1| hypothetical protein MCAN_10631 [Mycobacterium canettii CIPT 140010059] gi|340004258|emb|CCC43399.1| conserved hypothetical protein [Mycobacterium canettii CIPT 140010059] Length=393 Score = 776 bits (2003), Expect = 0.0, Method: Compositional matrix adjust. Identities = 392/393 (99%), Positives = 393/393 (100%), Gaps = 0/393 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLL+VTNNGTDT Sbjct 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLLVTNNGTDT 60 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA Sbjct 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVA 360 Query 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA Sbjct 361 STIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 >gi|289442484|ref|ZP_06432228.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289415403|gb|EFD12643.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=365 Score = 565 bits (1457), Expect = 4e-159, Method: Compositional matrix adjust. Identities = 303/303 (100%), Positives = 303/303 (100%), Gaps = 0/303 (0%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT Sbjct 53 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 112 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH Sbjct 113 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 172 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS Sbjct 173 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 232 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI Sbjct 233 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 292 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS Sbjct 293 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 352 Query 301 GDA 303 GDA Sbjct 353 GDA 355 >gi|118616115|ref|YP_904447.1| hypothetical protein MUL_0230 [Mycobacterium ulcerans Agy99] gi|118568225|gb|ABL02976.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=399 Score = 419 bits (1077), Expect = 4e-115, Method: Compositional matrix adjust. Identities = 232/402 (58%), Positives = 284/402 (71%), Gaps = 12/402 (2%) Query 1 MSVMNGREVARESRDA---QVFEFGTAPGSAV-VKIPVQGGPIGGIAISRDGSLLVVTNN 56 MS +NG++ RD QVFE GTAP V+I V GPIG I IS DGS L+VTN Sbjct 1 MSDVNGQQTGWNDRDGGDVQVFELGTAPDFPTSVEIAVANGPIGDIGISPDGSRLMVTNY 60 Query 57 GTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTV 116 G ++VSV+ TDTCRV +T+T ++E FA+ G ANRAYVSTVS+AYDAIAVIDVATN V Sbjct 61 GDNSVSVIDTDTCRVVETITGLDEAFAVTAGGPAANRAYVSTVSTAYDAIAVIDVATNAV 120 Query 117 LGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQC 176 + THPLALSVSDL S D KY+Y SRNG RGAD+AVLDT TG +DVVD++ PG TT+C Sbjct 121 VSTHPLALSVSDLAASSDGKYVYASRNGARGADIAVLDTATGR-VDVVDIATKPGLTTEC 179 Query 177 VRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSR-----QKSSKPRGNQAA 231 VR+S DG+ + VGANGPSGG L+V+ T A+S+ + Q + Q Sbjct 180 VRVSADGNRVDVGANGPSGGQLIVVATHAESELNPVRGGRARSRGRNGQGVAGSVVQQFP 239 Query 232 AGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIG 291 LR++ TI+IGSSVRDVA+SPDG AYVASCG+DFGAV+DV+DTRTH+IT +R I EIG Sbjct 240 RDLRIIDTIEIGSSVRDVAISPDGTTAYVASCGADFGAVIDVVDTRTHKITGTRKIEEIG 299 Query 292 GLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYS 351 GL+TR+S+ G+ +RAYLVSEDRVTVL R+ DVIGT+R QPS +ESP G LY+ADYS Sbjct 300 GLITRLSIGGNGERAYLVSEDRVTVLSARSQDVIGTVRVNQPSAAIESPGGDRLYVADYS 359 Query 352 GTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 GT+T T V VS + AL + S W PEL Q+ ALA Sbjct 360 GTVTMTLV-DLGVSAIDN-ALCQGLSADWVMPELLQFEAALA 399 >gi|240170309|ref|ZP_04748968.1| hypothetical protein MkanA1_13433 [Mycobacterium kansasii ATCC 12478] Length=397 Score = 418 bits (1075), Expect = 6e-115, Method: Compositional matrix adjust. Identities = 229/401 (58%), Positives = 285/401 (72%), Gaps = 12/401 (2%) Query 1 MSVMNGREVARESRDA---QVFEFGTAPG-SAVVKIPVQGGPIGGIAISRDGSLLVVTNN 56 MS +NG+ + RD Q+F G P A V+I + GPI +A+S DGS L+VTN Sbjct 1 MSDVNGQNTGWDERDGAQVQLFGSGATPDLPAAVEIRLNNGPIAAMAMSPDGSRLLVTNY 60 Query 57 GTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTV 116 +VSV+ TD CRV +T+ VNEPFAIA G+A A RAYVS VS +YD+I VID +TNT+ Sbjct 61 SDHSVSVIDTDNCRVVETIAGVNEPFAIATGSAPAARAYVSIVSPSYDSIGVIDTSTNTL 120 Query 117 LGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQC 176 THPL LSV+DLT+ P Y+YVSRNG RGADVAVLDT TG ++ +D++ APGTT +C Sbjct 121 AATHPLTLSVNDLTVDPGGNYVYVSRNGARGADVAVLDTATGG-VEAIDIATAPGTTAEC 179 Query 177 VRMSPDGSVLYVGANGPSGGLLVVITTRAQSD--GGRIGSRSRSRQKSSKPR--GNQAAA 232 VR S DG+ LYV NGPSGG LVV+ TRA+ D GG G RSR R+K+ K Sbjct 180 VRSSTDGTRLYVAINGPSGGQLVVVATRAEPDPDGGATG-RSRWRRKNPKNAHVAQDGKP 238 Query 233 GLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGG 292 LRVV TIDIGS+VRDVA+SPDGA YVASCG+DFGAVVDV+D+R ++T++R I +IGG Sbjct 239 KLRVVDTIDIGSAVRDVAVSPDGATVYVASCGADFGAVVDVVDSRAREVTATRKIDQIGG 298 Query 293 LVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSG 352 LVTR+++S D DRAYLVSEDRVTVL T T D+IGT+R QPSCV+ES DG ++YIADY+G Sbjct 299 LVTRLTLSSDGDRAYLVSEDRVTVLNTLTQDIIGTVRVAQPSCVIESRDGGHVYIADYTG 358 Query 353 TITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 TIT VA+T+ + A + S +W PEL QY ALA Sbjct 359 TITMVPVAATVARIDD--AREYEASTEWILPELLQYEAALA 397 >gi|183984384|ref|YP_001852675.1| hypothetical protein MMAR_4413 [Mycobacterium marinum M] gi|183177710|gb|ACC42820.1| conserved hypothetical protein [Mycobacterium marinum M] Length=399 Score = 417 bits (1072), Expect = 1e-114, Method: Compositional matrix adjust. Identities = 233/403 (58%), Positives = 286/403 (71%), Gaps = 14/403 (3%) Query 1 MSVMNGREVARESRDA---QVFEFGTAPGSAV-VKIPVQGGPIGGIAISRDGSLLVVTNN 56 MS +NG++ RD QVFE GTAP V+I V GPIG I IS DG L+VTN Sbjct 1 MSDVNGQQTGWNDRDGGDVQVFELGTAPDFPTSVEIAVANGPIGDIGISPDGRRLMVTNY 60 Query 57 GTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTV 116 G ++VSV+ TDTCRV +T+T ++E FA+ G ANRAYVSTVS+AYDAIAVIDVATN V Sbjct 61 GDNSVSVIDTDTCRVVETITGIDEAFAVTTGGPAANRAYVSTVSTAYDAIAVIDVATNAV 120 Query 117 LGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQC 176 + THPLALSVSDL S D KY+Y SRNG RGAD+AVLDT TG +DVVD++ PG TT+C Sbjct 121 VSTHPLALSVSDLAASSDGKYVYASRNGARGADIAVLDTATGR-VDVVDIATKPGLTTEC 179 Query 177 VRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRG------NQA 230 VR+S DG +YVGANGPSGG L+V+ T A+S+ + R+R + +G Q Sbjct 180 VRVSADGQRVYVGANGPSGGQLIVVATHAESELNPV-RGGRARSRGRNGKGVAGSVVKQF 238 Query 231 AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEI 290 LR++ TI+IGSSVRDVA+SPDG AYVASCG+DFGAV+DV+DTRT +IT +R I EI Sbjct 239 PRDLRIIDTIEIGSSVRDVAISPDGTTAYVASCGADFGAVIDVVDTRTRKITGTRKIEEI 298 Query 291 GGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADY 350 GGL+TR+S+ G+ +RAYLVSEDRVTVL R+ DVIGT+R QPS +ESP G LY+ADY Sbjct 299 GGLITRLSIGGNGERAYLVSEDRVTVLSARSQDVIGTVRVNQPSAAIESPGGDRLYVADY 358 Query 351 SGTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 SGT+T T V VS + AL + S W PEL Q+ ALA Sbjct 359 SGTVTMTLV-DLGVSAIDN-ALCQGLSADWVMPELLQFEAALA 399 >gi|342861652|ref|ZP_08718298.1| hypothetical protein MCOL_22301 [Mycobacterium colombiense CECT 3035] gi|342130786|gb|EGT84082.1| hypothetical protein MCOL_22301 [Mycobacterium colombiense CECT 3035] Length=402 Score = 352 bits (903), Expect = 7e-95, Method: Compositional matrix adjust. Identities = 194/391 (50%), Positives = 254/391 (65%), Gaps = 23/391 (5%) Query 4 MNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSV 63 +NG A + D ++FE T ++VV++P+ GPI + IS DG LV TN G + VSV Sbjct 34 VNGPTAAHDDPDGRIFELDT---TSVVRVPLHNGPISDMDISPDGRRLVATNYGRNMVSV 90 Query 64 VGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLA 123 + TCR++ +T + EPFA+ M A++N AYVS ++ YDAI VIDV TN + TH LA Sbjct 91 IDASTCRLSSALTGLTEPFAVTMSRADSNYAYVSIATAGYDAIEVIDVVTNWRIATHRLA 150 Query 124 LSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDG 183 SVSDLT+SPD KYLY SRN RGADV VLDTTTG L +V+D++ PGTTT+CVR+S DG Sbjct 151 NSVSDLTVSPDGKYLYASRNAVRGADVTVLDTTTGEL-EVIDLATVPGTTTECVRISADG 209 Query 184 SVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIG 243 LYVG N +GG L ++ TR +SD R+G RS R+V +D+G Sbjct 210 RRLYVGMNARTGGSLAMLETRTRSDNRRVGGRS------------------RLVGVVDLG 251 Query 244 SSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDA 303 +RDVALS DG AYVASC GAV+DVIDTR ++I + I EI G +TR+++S D Sbjct 252 LPLRDVALSNDGGTAYVASCDPVAGAVLDVIDTRVNKIVGTHKIPEITGPLTRMTLSRDG 311 Query 304 DRAYLVSEDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIADYSGTITRTAVAST 362 RAYL+S+DR+TVL T DV+G ++ Q PSCVVESPDG +LY+ADYSG +T +AS Sbjct 312 ARAYLISDDRITVLSTHQQDVVGEVKVSQHPSCVVESPDGTHLYVADYSGVVTAARIASA 371 Query 363 IVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 S T A R S+ + PEL ++ P LA Sbjct 372 APSQTGGGASDRDLSVAGWLPELPEWEPVLA 402 >gi|254822126|ref|ZP_05227127.1| hypothetical protein MintA_19482 [Mycobacterium intracellulare ATCC 13950] Length=377 Score = 340 bits (873), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 194/371 (53%), Positives = 250/371 (68%), Gaps = 28/371 (7%) Query 27 SAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAM 86 +AVV++PV GPI + +S DG L+VTN D V+V+ T RV+ T+ ++EP A+AM Sbjct 31 TAVVRVPVHHGPISDMDLSGDGRRLLVTNYARDAVTVIDAHTLRVSSTLAGLSEPSAVAM 90 Query 87 GNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTR 146 +A+AN AYVST ++AYDAI VIDV TN + THP+A SVSDLT+S D K+LY SRN R Sbjct 91 SSADANYAYVSTATAAYDAIEVIDVVTNWRIATHPVAHSVSDLTVSADGKHLYASRNAVR 150 Query 147 GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQ 206 GADV VLDTTTG L +V++++ APGTTT CVR S DG LYVG NGP+GG L V+ TR + Sbjct 151 GADVTVLDTTTGEL-EVIELATAPGTTTACVRASADGRRLYVGVNGPNGGSLAVVETRTR 209 Query 207 SDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 SDGGR+G RS RVV TI++G VRDVALS DGA AYVASCG Sbjct 210 SDGGRVGGRS------------------RVVGTIELGLPVRDVALSSDGATAYVASCGPV 251 Query 267 FGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIG 326 G+V+DVIDTR +++ + I+EI G + R+++S D +RAYLVS+DRVTVL R DV+G Sbjct 252 VGSVLDVIDTRANKLVKTHKINEITGPLARMTLSRDGERAYLVSDDRVTVLGMRALDVLG 311 Query 327 TIR-TGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQL---ALQRRGSMQWFS 382 + T PSCV+ESPDG +LY+ADYSG +T A+ I SG A + W Sbjct 312 EVTVTKNPSCVLESPDGSHLYVADYSGVLT----AARIDSGQTPHSGDADHPDATAGWLF 367 Query 383 PELQQYAPALA 393 ++ Q+ PALA Sbjct 368 -DVPQWEPALA 377 >gi|41407105|ref|NP_959941.1| hypothetical protein MAP1007 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395456|gb|AAS03324.1| hypothetical protein MAP_1007 [Mycobacterium avium subsp. paratuberculosis K-10] Length=395 Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 193/373 (52%), Positives = 251/373 (68%), Gaps = 29/373 (7%) Query 27 SAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAM 86 +AVVK+PV GPI I +S DG L+VTN G DTVSV+ T TCRV T+ ++EPFA+AM Sbjct 46 TAVVKVPVHHGPISDIDVSPDGRRLLVTNYGRDTVSVIDTHTCRVASTIAGLSEPFAVAM 105 Query 87 GNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTR 146 A+ N AYVST ++AYDAI VIDV TN + TH LA S+SDL +SPD +YLY SRN R Sbjct 106 SAADPNYAYVSTATAAYDAIEVIDVVTNWRIATHRLAHSLSDLAVSPDGRYLYASRNAVR 165 Query 147 GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQ 206 GADVAVLDTTTG L +V++++ A GTTT CVR+S DG L++G NGP+GG L +I TR + Sbjct 166 GADVAVLDTTTGEL-EVIELAAAAGTTTACVRVSADGRRLFIGVNGPNGGGLAIIETRTR 224 Query 207 SDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 +DG R+G RS R+V T+++G VRDVAL DG AYVASCG Sbjct 225 TDGRRVGGRS------------------RLVGTVELGLPVRDVALGNDGNTAYVASCGPV 266 Query 267 FGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIG 326 G+V+DV+DTR I S+ I+EI G +TR+++S D +RAYL+S+DRVTVL TRT DV+G Sbjct 267 VGSVLDVVDTRAATIVSTHKINEITGPLTRMTLSRDGERAYLISDDRVTVLGTRTQDVLG 326 Query 327 TIR-TGQPSCVVESPDGKYLYIADYSGTITRTAVAS-----TIVSGTEQLALQRRGSMQW 380 +R T PS +VESPDG YLY+AD+SG ++ ++S SG ++ + W Sbjct 327 EVRVTKHPSALVESPDGHYLYVADHSGVLSVARLSSGTAPAAPCSGADE---DDDATTGW 383 Query 381 FSPELQQYAPALA 393 PEL + P LA Sbjct 384 L-PELAPWEPVLA 395 >gi|336461471|gb|EGO40341.1| YVTN family beta-propeller repeat protein [Mycobacterium avium subsp. paratuberculosis S397] Length=365 Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 193/373 (52%), Positives = 251/373 (68%), Gaps = 29/373 (7%) Query 27 SAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAM 86 +AVVK+PV GPI I +S DG L+VTN G DTVSV+ T TCRV T+ ++EPFA+AM Sbjct 16 TAVVKVPVHHGPISDIDVSPDGRRLLVTNYGRDTVSVIDTHTCRVASTIAGLSEPFAVAM 75 Query 87 GNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTR 146 A+ N AYVST ++AYDAI VIDV TN + TH LA S+SDL +SPD +YLY SRN R Sbjct 76 SAADPNYAYVSTATAAYDAIEVIDVVTNWRIATHRLAHSLSDLAVSPDGRYLYASRNAVR 135 Query 147 GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQ 206 GADVAVLDTTTG L +V++++ A GTTT CVR+S DG L++G NGP+GG L +I TR + Sbjct 136 GADVAVLDTTTGEL-EVIELAAAAGTTTACVRVSADGRRLFIGVNGPNGGGLAIIETRTR 194 Query 207 SDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 +DG R+G RS R+V T+++G VRDVAL DG AYVASCG Sbjct 195 TDGRRVGGRS------------------RLVGTVELGLPVRDVALGNDGNTAYVASCGPV 236 Query 267 FGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIG 326 G+V+DV+DTR I S+ I+EI G +TR+++S D +RAYL+S+DRVTVL TRT DV+G Sbjct 237 VGSVLDVVDTRAATIVSTHKINEITGPLTRMTLSRDGERAYLISDDRVTVLGTRTQDVLG 296 Query 327 TIR-TGQPSCVVESPDGKYLYIADYSGTITRTAVAS-----TIVSGTEQLALQRRGSMQW 380 +R T PS +VESPDG YLY+AD+SG ++ ++S SG ++ + W Sbjct 297 EVRVTKHPSALVESPDGHYLYVADHSGVLSVARLSSGTAPAAPCSGADE---DDDATTGW 353 Query 381 FSPELQQYAPALA 393 PEL + P LA Sbjct 354 L-PELAPWEPVLA 365 >gi|118466241|ref|YP_880431.1| hypothetical protein MAV_1185 [Mycobacterium avium 104] gi|254774068|ref|ZP_05215584.1| hypothetical protein MaviaA2_05263 [Mycobacterium avium subsp. avium ATCC 25291] gi|118167528|gb|ABK68425.1| conserved hypothetical protein [Mycobacterium avium 104] Length=395 Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust. Identities = 194/374 (52%), Positives = 250/374 (67%), Gaps = 31/374 (8%) Query 27 SAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAM 86 +AVVK+PV GPI I +S DG L+VTN G DTVSV+ T TCRV T+ ++EPFA+AM Sbjct 46 TAVVKVPVHHGPISDIDVSPDGRRLLVTNYGRDTVSVIDTHTCRVASTIAGLSEPFAVAM 105 Query 87 GNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTR 146 A+ N AYVST ++AYDAI VIDV TN + TH LA S+SDL +SPD +YLY SRN R Sbjct 106 SAADPNYAYVSTATAAYDAIEVIDVVTNWRIATHRLAHSLSDLAVSPDGRYLYASRNAVR 165 Query 147 GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQ 206 GADVAVLDTTTG L +V++++ A GTTT CVR+S DG L+VG NGP+GG L +I TR + Sbjct 166 GADVAVLDTTTGEL-EVIELAAAAGTTTACVRVSADGRRLFVGVNGPNGGGLAIIETRTR 224 Query 207 SDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 +DG R+G RS R+V T+++G VRDVAL DG AYVASCG Sbjct 225 TDGRRVGGRS------------------RLVGTVELGLPVRDVALGNDGNTAYVASCGPV 266 Query 267 FGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIG 326 G+V+DV+DTR I S+ I+EI G +TR+++S D +RAYL+S+DRVTVL TRT DV+G Sbjct 267 VGSVLDVVDTRAATIVSTHKINEITGPLTRMTLSRDGERAYLISDDRVTVLGTRTQDVLG 326 Query 327 TIR-TGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLA------LQRRGSMQ 379 +R T PS +VESPDG YLY+AD++G ++ + + SGT A + Sbjct 327 EVRVTKHPSALVESPDGNYLYVADHAGVLS----VARLPSGTAPAAPCSGADEDDDATTG 382 Query 380 WFSPELQQYAPALA 393 W PEL + P LA Sbjct 383 WL-PELAPWEPVLA 395 >gi|296169926|ref|ZP_06851535.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295895390|gb|EFG75095.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length=353 Score = 310 bits (793), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 186/394 (48%), Positives = 240/394 (61%), Gaps = 42/394 (10%) Query 1 MSVMNGREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDT 60 MS +N R+ ++ RD +VF ++VV+IPV GPI I IS DGS LVV N+G D Sbjct 1 MSGVNDRKAPQDDRDERVFRLDD---TSVVRIPVGNGPISDIGISPDGSRLVVANHGRDA 57 Query 61 VSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTH 120 VS++ TD RV ++VT + EPFA+A+ +A +VST + +YD++ V+D+AT + TH Sbjct 58 VSIIDTDARRVVRSVTGLGEPFAVALNGGDAPLVFVSTATMSYDSVDVVDLATGAHVATH 117 Query 121 PLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMS 180 PLA SVSDL +S D + +Y S NG RGA V VLD T + V+D++ PGTT CVR+S Sbjct 118 PLAQSVSDLAVSGDGRLVYASGNGARGAYVTVLDVIT-EDVAVIDLAIEPGTTADCVRVS 176 Query 181 PDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATI 240 PDG LY NGPSGG LV + R RS R+V Sbjct 177 PDGRHLYAATNGPSGGRLVEVDPR----------RS------------------RIVGAY 208 Query 241 DIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVS 300 ++G +RDVALS DG AYVASCG GAV+DV+D RT +IT +R +SE+ G +TR+++S Sbjct 209 ELGLPIRDVALSDDGGTAYVASCGPVVGAVLDVVDIRTRKITGTRKLSEVAGPLTRLTLS 268 Query 301 GDADRAYLVSEDRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIADYSGTITRTAV 359 D RAYLVS+DRV V+CTR+HDV+G I QPSCVVESPDG+YLYIA YSG +T V Sbjct 269 RDGRRAYLVSDDRVAVVCTRSHDVVGDITVAKQPSCVVESPDGRYLYIAGYSGVVT---V 325 Query 360 ASTIVSGTEQLALQRRGSMQWFSPELQQYAPALA 393 A G A R P L Q P LA Sbjct 326 APITAGGGSAEASTTR------LPALAQREPVLA 353 >gi|333989648|ref|YP_004522262.1| hypothetical protein JDM601_1008 [Mycobacterium sp. JDM601] gi|333485616|gb|AEF35008.1| conserved hypothetical protein [Mycobacterium sp. JDM601] Length=345 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 140/376 (38%), Positives = 197/376 (53%), Gaps = 40/376 (10%) Query 17 QVFEFG-TAPGSAVV-KIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQT 74 V +G T PG+ +V ++ V GPIGG+A++ DG+ L+ TN G DTVS++ T +C V T Sbjct 3 DVVAYGLTGPGARIVDRVRVGRGPIGGVAVTADGTRLLATNYGDDTVSIIDTASCTVVAT 62 Query 75 VTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPD 134 V +EPF+IA+G A RAYV+ S A DA+ IDV T V G +P+A+ + DL P Sbjct 63 VFQADEPFSIAVGPAGTARAYVTAGSMALDAVLAIDVDTAEVTGCYPVAMGIGDLVADPM 122 Query 135 DKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPS 194 +Y +R G+ G +V LD T V V+ C+R+SPDG LYV P+ Sbjct 123 GSRVYATRTGSAGVEVLALDATMRP-AGAVRVAGDAAAAAACLRISPDGRRLYVAVRQPT 181 Query 195 GGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPD 254 G + V+ RQ L VV I + S+V DVA+S D Sbjct 182 GDTVTVL----------------DRQ-------------LNVVDVIKVASTVVDVAVSAD 212 Query 255 GAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRV 314 GA +VA+ G D V+V+D+RTH + + + + ++ VS D DR YLV+ + Sbjct 213 GARLFVATSGPDGRGAVNVVDSRTHAVGAGFVVDT---QLIQLIVSRDGDRVYLVTAAGI 269 Query 315 TVLCTRTHDVIGTI-RTGQPSCVVESPDGKYLYIADYSGTITRTAVA---STIVSGTEQL 370 V+C RT + +G + T PSCV ESPDG LYIA + G + ++A + S EQL Sbjct 270 LVMCARTDEALGALTLTTAPSCVAESPDGSCLYIAGFDGAVAVASLADLPAPSASLHEQL 329 Query 371 ALQRRGS-MQWFSPEL 385 AL S M P L Sbjct 330 ALDDAVSRMLQLEPAL 345 >gi|118473416|ref|YP_889554.1| hypothetical protein MSMEG_5308 [Mycobacterium smegmatis str. MC2 155] gi|118174703|gb|ABK75599.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2 155] Length=368 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 119/357 (34%), Positives = 182/357 (51%), Gaps = 38/357 (10%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 + V GPI IAI D +VVTN+ D ++V+ T +V EPFA+A + Sbjct 46 VEVGRGPIADIAIDADRETIVVTNSAADCLTVINPYTLAPVGSVRLNGEPFAVAAAD--- 102 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 +RAYVS V++ +DAI V+D T +VL +PLA++V+ L +SPD K ++V R+G DVA Sbjct 103 DRAYVSVVTAGHDAIKVVDTITGSVLAEYPLAMTVTALAMSPDGKRVFVGRSGHDRIDVA 162 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V+D T + +D++ G +R+ G LYV P G +V + Sbjct 163 VID-TAAERVGTIDLASGAGAGVDALRVDASGKRLYVATTDPRGSRMVTVNIETA----- 216 Query 212 IGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVV 271 ++ +T+ IG+ +RD+AL DG A V + VV Sbjct 217 -----------------------QIESTVWIGAPIRDLALGADGK-ALVLTSDRQRRGVV 252 Query 272 DVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRTG 331 ++D T + + +IGG T++ +S DA RAY+V DRV VLCT T++++G+I G Sbjct 253 HIVDLSTAAVVGA---IQIGGAPTQLVLSPDATRAYVVDYDRVIVLCTLTNEILGSIDVG 309 Query 332 -QPSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQL-ALQRRGSMQWFSPELQ 386 QP+ V DG +Y+ADYSG + VA+ + + +L A + R P LQ Sbjct 310 MQPAAVAVRRDGARVYVADYSGQVNAFDVAAELPALYSRLVASEPRQDATTVLPSLQ 366 >gi|108801143|ref|YP_641340.1| hypothetical protein Mmcs_4179 [Mycobacterium sp. MCS] gi|119870275|ref|YP_940227.1| hypothetical protein Mkms_4245 [Mycobacterium sp. KMS] gi|126436972|ref|YP_001072663.1| hypothetical protein Mjls_4401 [Mycobacterium sp. JLS] gi|108771562|gb|ABG10284.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119696364|gb|ABL93437.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126236772|gb|ABO00173.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=348 Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 111/350 (32%), Positives = 167/350 (48%), Gaps = 40/350 (11%) Query 37 GPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYV 96 GP+G +A+ +V TN +++V DT + V P +A+ +RAYV Sbjct 38 GPVGDLAVDSASGFVVTTNPADRSITVFDADTLGSARVVAVGGTPGLVAVAE---DRAYV 94 Query 97 STVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTT 156 +T S DA+ V+D TV+ +PLA + + +T+SPD K +Y+ R G + DVAVLD T Sbjct 95 TTSSLHDDAVTVVDTRVGTVIARYPLAFTATAMTISPDGKRVYIGRTGDQDVDVAVLD-T 153 Query 157 TGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRS 216 + + PGTT VR+ G LYV G +G L+ + Sbjct 154 AAERFGTIGIGYRPGTTVDAVRVDAAGRRLYVATTGLAGSALLTVDIETA---------- 203 Query 217 RSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDT 276 RVV + + S +RD+AL DG +AYV +G +DVID Sbjct 204 ------------------RVVRRLRLPSPIRDLALGRDG-LAYVLRSDRRYGGSIDVIDL 244 Query 277 RTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIR-TGQPSC 335 + + S A IGG T+++VS D RAY+V DRV V T +V+ I G P+C Sbjct 245 GANVVIDSVA---IGGAPTQLTVSPDGSRAYVVDYDRVAVFDAMTSEVVDEITGEGSPAC 301 Query 336 VVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPEL 385 V DG+ +Y+AD++G +T A + T+ + R M+ SP + Sbjct 302 VAVREDGRRIYVADHAGAMTSLATPRKHFAATDPIV---RPDMRELSPAV 348 >gi|120405651|ref|YP_955480.1| hypothetical protein Mvan_4699 [Mycobacterium vanbaalenii PYR-1] gi|119958469|gb|ABM15474.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=363 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 112/366 (31%), Positives = 171/366 (47%), Gaps = 40/366 (10%) Query 6 GREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVG 65 G + A D + E T+ +I + GP+G IA + +V+ N G D+VSV+ Sbjct 18 GSKAASHVADEPLTEAATSDVVLERRITLGRGPVGDIAAGQ--GFVVMANAGDDSVSVID 75 Query 66 TDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALS 125 T V T+ +P A+ A +RAYV + ++DA+ ID+ TV+ THPLA Sbjct 76 PMTLAVVDTIAVDGQPVAV---TASDDRAYVCVAAESHDAVCAIDLEAGTVVSTHPLASG 132 Query 126 VSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSV 185 V+ L +SPD K +Y R+ DVAV+D T + + + P + + P G Sbjct 133 VTALAVSPDGKRVYAGRDAQDRVDVAVID-VTAERVGTIGIGSGPAANVDALSVDPSGKR 191 Query 186 LYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSS 245 LYV G LV++ T V + IG+ Sbjct 192 LYVAVTDAVGSRLVIVDTETS----------------------------LVHRVLPIGAP 223 Query 246 VRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADR 305 +RD+A + G YV + G V V+D ++T R + +GG T++++S D R Sbjct 224 IRDIAYA--GGAVYVLTSDRAVGGTVHVVDLNAMRVT-DRVV--VGGAPTQLTMSADQTR 278 Query 306 AYLVSEDRVTVLCTRTHDVIGTIRT-GQPSCVVESPDGKYLYIADYSGTITRTAVASTIV 364 AY+V DRV VLCT DV+ ++ +PSCV D LYIADY+G ++ +V S+I Sbjct 279 AYIVDYDRVAVLCTLGLDVVDSLAVDARPSCVTHPADSSRLYIADYTGAVSVFSVESSIE 338 Query 365 SGTEQL 370 + Q Sbjct 339 TLYSQF 344 >gi|315443077|ref|YP_004075956.1| hypothetical protein Mspyr1_14480 [Mycobacterium sp. Spyr1] gi|315261380|gb|ADT98121.1| hypothetical protein Mspyr1_14480 [Mycobacterium sp. Spyr1] Length=354 Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 106/328 (33%), Positives = 168/328 (52%), Gaps = 40/328 (12%) Query 37 GPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYV 96 GPIG +A + DG ++V+ N D+VS++ T V TV EP A+A+ + RAYV Sbjct 40 GPIGDMATT-DG-VVVIANPADDSVSLLDPSTLTVVDTVLVDGEPQAVAVAD---GRAYV 94 Query 97 STVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTT 156 ++ +DA+AV+D+ + TV+ T+PLA V+ L +SPD K +Y R DVAV+D Sbjct 95 GIAAAGHDAVAVVDLDSRTVIKTYPLAFGVTALAVSPDGKRVYAGRCVRDRVDVAVID-V 153 Query 157 TGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRS 216 T + +D+ + P + + P G +Y+ G L+V+ T Sbjct 154 TAERVGTIDIGRGPAANIDAMSVDPGGKRMYLAVTDTEGSRLIVVDTETS---------- 203 Query 217 RSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDT 276 RV + IGS +RD+ + GA+ Y + G + V+D Sbjct 204 ------------------RVSRVVPIGSPIRDLGYAA-GAL-YALTSDRAVGGAIHVVDL 243 Query 277 RTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRT-GQPSC 335 T ++T + + +GG T++ +S D RAY+V DRV V+ T + +V ++ +PSC Sbjct 244 ATWKVTEA---TTLGGAPTQLVMSADQTRAYVVDYDRVAVVSTSSLEVSDSLTAEARPSC 300 Query 336 VVESPDGKYLYIADYSGTITRTAVASTI 363 V +S DG LYIADYSG ++ +V S+I Sbjct 301 VTQSADGTRLYIADYSGGVSVLSVESSI 328 >gi|145222612|ref|YP_001133290.1| hypothetical protein Mflv_2024 [Mycobacterium gilvum PYR-GCK] gi|145215098|gb|ABP44502.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=343 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 105/328 (33%), Positives = 168/328 (52%), Gaps = 40/328 (12%) Query 37 GPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYV 96 GPIG +A + DG ++ + N G D+VS++ T V TV EP A+A+ + RAYV Sbjct 29 GPIGDMATT-DG-VVAIANPGDDSVSLLDPSTLTVVDTVVVDGEPQAVAVAD---GRAYV 83 Query 97 STVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTT 156 ++ +DA+AV+D+ + T++ T+PLA V+ L +SPD K +Y R DVAV+D Sbjct 84 GIAAAGHDAVAVVDLDSRTLIKTYPLAFGVTALAVSPDGKRVYAGRCVRDRVDVAVID-V 142 Query 157 TGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRS 216 T + +D+ + P + + P G +Y+ G L+V+ T Sbjct 143 TAERVGTIDIGRGPAANIDAMSVDPGGKRMYLAVTDTEGSRLIVVDTETS---------- 192 Query 217 RSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDT 276 RV + IGS +RD+ + GA+ Y + G + V+D Sbjct 193 ------------------RVSRVVPIGSPIRDLGYAA-GAL-YALTSDRAVGGAIHVVDL 232 Query 277 RTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSEDRVTVLCTRTHDVIGTIRT-GQPSC 335 T ++T + + +GG T++ +S D RAY+V DRV V+ T + +V ++ +PSC Sbjct 233 ATWKVTEA---TTLGGAPTQLVMSADQTRAYVVDYDRVAVVSTSSLEVSDSLTAEARPSC 289 Query 336 VVESPDGKYLYIADYSGTITRTAVASTI 363 V +S DG LYIADYSG ++ +V S+I Sbjct 290 VTQSADGTRLYIADYSGGVSVLSVESSI 317 >gi|271966436|ref|YP_003340632.1| YVTN beta-propeller repeat-containing protein [Streptosporangium roseum DSM 43021] gi|270509611|gb|ACZ87889.1| YVTN beta-propeller repeat-containing protein [Streptosporangium roseum DSM 43021] Length=366 Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 92/294 (32%), Positives = 150/294 (52%), Gaps = 47/294 (15%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 G+AI+ +G+ + VTN ++ VSV+ T T V TV P ++A+ A AYV+ + Sbjct 80 GVAITPNGAFVYVTNIASNDVSVINTATNTVITTVAVGAIPLSVAITPNGA-FAYVTNLD 138 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 S D ++VI+ ATNTV+ T P+ + ++PD YV+ + +V+V++TTT + Sbjct 139 S--DNVSVINTATNTVIATVPVGDGPDGVAITPDGALAYVTN--SNANNVSVINTTTNTV 194 Query 161 I-DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSR 219 + D +DV P Q V ++P+G+ YV NG S + V+ TT Sbjct 195 VGDPIDVGDDP----QQVAITPNGAFAYV-INGSSDNVSVINTTTNT------------- 236 Query 220 QKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTH 279 V+AT+D+G++ R VA++PDGA AYV + + V VI+T T+ Sbjct 237 ----------------VIATVDVGANPRGVAITPDGAFAYVGNRALNN---VSVINTTTN 277 Query 280 QITSSRAISEIGGLVTRVSVSGDADRAYL--VSEDRVTVLCTRTHDVIGTIRTG 331 + E+G V+++ D R Y+ + D V+V+ T T+ VI T+ G Sbjct 278 TVVGDPI--EVGAEPQGVAITSDGSRVYVGNRNSDNVSVIDTATNTVITTVAVG 329 Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 81/299 (28%), Positives = 142/299 (48%), Gaps = 55/299 (18%) Query 94 AYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVL 153 AYV+ +S + ++VI+ ATNTV+ T + S + ++P+ ++YV+ + DV+V+ Sbjct 48 AYVANSNS--NNVSVINTATNTVVTTVDVGDVPSGVAITPNGAFVYVTNIASN--DVSVI 103 Query 154 DTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIG 213 +T T +I V V P V ++P+G+ YV T SD + Sbjct 104 NTATNTVITTVAVGAIP----LSVAITPNGAFAYV--------------TNLDSDNVSVI 145 Query 214 SRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDV 273 + + + V+AT+ +G VA++PDGA+AYV + ++ V V Sbjct 146 NTATN----------------TVIATVPVGDGPDGVAITPDGALAYVTNSNANN---VSV 186 Query 274 IDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLV--SEDRVTVLCTRTHDVIGTIRTG 331 I+T T+ + ++G +V+++ + AY++ S D V+V+ T T+ VI T+ G Sbjct 187 INTTTNTVVGDPI--DVGDDPQQVAITPNGAFAYVINGSSDNVSVINTTTNTVIATVDVG 244 Query 332 -QPSCVVESPDGKYLYIADYS-------GTITRTAVASTIVSGTEQ--LALQRRGSMQW 380 P V +PDG + Y+ + + T T T V I G E +A+ GS + Sbjct 245 ANPRGVAITPDGAFAYVGNRALNNVSVINTTTNTVVGDPIEVGAEPQGVAITSDGSRVY 303 >gi|345013898|ref|YP_004816252.1| 40-residue YVTN family beta-propeller repeat-containing protein [Streptomyces violaceusniger Tu 4113] gi|344040247|gb|AEM85972.1| 40-residue YVTN family beta-propeller repeat protein [Streptomyces violaceusniger Tu 4113] Length=336 Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 107/345 (32%), Positives = 161/345 (47%), Gaps = 63/345 (18%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGT-------DTVSVVGTDTCRVTQTVTSVNEPFAI 84 IPV GP +A++ DGS V N G DTVSV+ T T V TV P + Sbjct 16 IPVGEGP-SAVALTPDGSRAYVANYGRWATDAPGDTVSVIDTATAEVIDTVVVGVGPSGL 74 Query 85 AMGNAEANRAYVSTVSSAYDA---IAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVS 141 A+ + +R YV S + ++VID A+N V T + S + ++PD +YVS Sbjct 75 AI-LPDGSRVYVVNYGSGKEPGNTVSVIDTASNKVTATIEVGNSPDGVAVTPDGSRVYVS 133 Query 142 RNGTR---GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYV---GANGPSG 195 G+ G V+V+DT T ++ + V V + PG V + DG YV G + Sbjct 134 ELGSEANLGNTVSVIDTATDSITETVTVGRGPG----AVAIDDDGGHAYVVNYGEESETD 189 Query 196 GLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDG 255 G + VI + V A++ +G + VA++PDG Sbjct 190 GTVSVIDIAKNT----------------------------VTASVTVGKAPGAVAITPDG 221 Query 256 AIAYVASCG--SDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSED- 312 A AYVA G SD G V VIDTRT + S + E+G V+++ D RAY+++ Sbjct 222 AYAYVADHGLFSDPGDTVSVIDTRTRSVVS---VIEVGVGPGGVAIAPDGSRAYILNMGG 278 Query 313 ------RVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIADY 350 ++V+ T T VI T+ + P+ + SP+G++ YIA+Y Sbjct 279 NSAPGRTMSVIDTATRSVITTVPVQRTPAGMAVSPEGRWAYIANY 323 Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 72/247 (30%), Positives = 124/247 (51%), Gaps = 47/247 (19%) Query 41 GIAISRDGSLLVVTNNGTD-----TVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAY 95 G+A++ DGS + V+ G++ TVSV+ T T +T+TVT P A+A+ + + AY Sbjct 120 GVAVTPDGSRVYVSELGSEANLGNTVSVIDTATDSITETVTVGRGPGAVAIDD-DGGHAY 178 Query 96 VSTVSSAYDA---IAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGT---RGAD 149 V + ++VID+A NTV + + + + ++PD Y YV+ +G G Sbjct 179 VVNYGEESETDGTVSVIDIAKNTVTASVTVGKAPGAVAITPDGAYAYVADHGLFSDPGDT 238 Query 150 VAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGS---VLYVGANGPSGGLLVVITTRAQ 206 V+V+DT T +++ V++V PG V ++PDGS +L +G N G + VI T + Sbjct 239 VSVIDTRTRSVVSVIEVGVGPG----GVAIAPDGSRAYILNMGGNSAPGRTMSVIDTATR 294 Query 207 SDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 S V+ T+ + + +A+SP+G AY+A+ G++ Sbjct 295 S----------------------------VITTVPVQRTPAGMAVSPEGRWAYIANYGAN 326 Query 267 FGAVVDV 273 +VVD+ Sbjct 327 TVSVVDL 333 Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 74/250 (30%), Positives = 112/250 (45%), Gaps = 53/250 (21%) Query 119 THPLALSVSDLTLSPDDKYLYVSRNGTRGAD-----VAVLDTTTGALIDVVDVSQAPGTT 173 T P+ S + L+PD YV+ G D V+V+DT T +ID V V P Sbjct 15 TIPVGEGPSAVALTPDGSRAYVANYGRWATDAPGDTVSVIDTATAEVIDTVVVGVGP--- 71 Query 174 TQCVRMSPDGSVLYV---GANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQA 230 + + PDGS +YV G+ G + VI T + Sbjct 72 -SGLAILPDGSRVYVVNYGSGKEPGNTVSVIDTASN------------------------ 106 Query 231 AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD--FGAVVDVIDTRTHQITSSRAIS 288 +V ATI++G+S VA++PDG+ YV+ GS+ G V VIDT T IT + + Sbjct 107 ----KVTATIEVGNSPDGVAVTPDGSRVYVSELGSEANLGNTVSVIDTATDSITETVTVG 162 Query 289 EIGGLVTRVSVSGDADRAYLV-------SEDRVTVLCTRTHDVIGTIRTGQ-PSCVVESP 340 G V++ D AY+V ++ V+V+ + V ++ G+ P V +P Sbjct 163 RGPG---AVAIDDDGGHAYVVNYGEESETDGTVSVIDIAKNTVTASVTVGKAPGAVAITP 219 Query 341 DGKYLYIADY 350 DG Y Y+AD+ Sbjct 220 DGAYAYVADH 229 Score = 42.7 bits (99), Expect = 0.098, Method: Compositional matrix adjust. Identities = 36/123 (30%), Positives = 64/123 (53%), Gaps = 9/123 (7%) Query 40 GGIAISRDGSLLVVTNNGT-----DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRA 94 G +AI+ DG+ V ++G DTVSV+ T T V + P +A+ + +RA Sbjct 213 GAVAITPDGAYAYVADHGLFSDPGDTVSVIDTRTRSVVSVIEVGVGPGGVAIA-PDGSRA 271 Query 95 YVSTV---SSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 Y+ + S+ ++VID AT +V+ T P+ + + + +SP+ ++ Y++ G V Sbjct 272 YILNMGGNSAPGRTMSVIDTATRSVITTVPVQRTPAGMAVSPEGRWAYIANYGANTVSVV 331 Query 152 VLD 154 LD Sbjct 332 DLD 334 >gi|21228572|ref|NP_634494.1| putative surface layer protein [Methanosarcina mazei Go1] gi|20907064|gb|AAM32166.1| putative surface layer protein [Methanosarcina mazei Go1] Length=1673 Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 90/303 (30%), Positives = 154/303 (51%), Gaps = 46/303 (15%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P+G + IS DG+ + V N ++ VS++ T T V TV + + P +A+ + + Sbjct 70 IPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV-SPDG 127 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 + YV+ ++S+ ++VID +NTV GT S L LSPD K LYV+ NG + V+ Sbjct 128 KQVYVTNMASS--TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK--TVS 183 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V++T T A+I+ V V ++P + + ++PDG+ +YV AN S + V+ T Sbjct 184 VINTVTKAVINTVSVGRSP----KGIAVTPDGTKVYV-ANFDSMSISVIDTVTNS----- 233 Query 212 IGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVV 271 V+ T+ + ++ +A++P+G AYV + F V Sbjct 234 ------------------------VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFN-TV 268 Query 272 DVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIR 329 VIDT T++IT A +G ++V+ D + Y+ + V+V+ T T+ + T+ Sbjct 269 SVIDTGTNKIT---ARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 325 Query 330 TGQ 332 G+ Sbjct 326 VGK 328 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 83/338 (25%), Positives = 161/338 (48%), Gaps = 51/338 (15%) Query 49 SLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAV 108 + + N+ +D +SV+ + +VT T+ + P A+ + + + YV+ S + +++ Sbjct 44 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMG-AVISPDGTKVYVANAHS--NDVSI 100 Query 109 IDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQ 168 ID ATN V+ T P S + +SPD K +YV+ + + ++V+DTT+ + V + Sbjct 101 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTGK 158 Query 169 APGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGN 228 +P + +SPDG LYV NG ++ T+A Sbjct 159 SP----LGLALSPDGKKLYVTNNGDKTVSVINTVTKA----------------------- 191 Query 229 QAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAIS 288 V+ T+ +G S + +A++PDG YVA+ S + VIDT T+ + + Sbjct 192 -------VINTVSVGRSPKGIAVTPDGTKVYVANFDS---MSISVIDTVTNSVIDTV--- 238 Query 289 EIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCVVESPDGK 343 ++ + ++V+ + +AY+ + D+ V+V+ T T+ + I G P+ + +PDGK Sbjct 239 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSVIDTGTNKITARIPVGPDPAGIAVTPDGK 298 Query 344 YLYIA-DYSGTITRTAVASTIVSGTEQLALQRRGSMQW 380 +Y+A + T++ A+ ++ T + S Q+ Sbjct 299 KVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQF 336 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/243 (29%), Positives = 113/243 (47%), Gaps = 41/243 (16%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG L V++ + VSV+ T T VT TV + P +A+ + +AYV+ Sbjct 514 GIAVTPDGKKLYVSDRDINGVSVIDTSTNTVTATVPAGINPLGVAI-TPDGRKAYVANRY 572 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 S + ++VID TN + + ++ + D LYV+ V+V+DT T + Sbjct 573 S--NNVSVIDTVTNNEIAAVKVGTGPCGVSFNQDGTRLYVTN--CESNSVSVIDTATNTV 628 Query 161 IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQ 220 D + V + P V +SPDG+ +YV AN S + V+ Sbjct 629 TDTLAVEKWP----LGVSVSPDGTKIYV-ANERSNNVSVI-------------------- 663 Query 221 KSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGS--DFGAVVDVIDTRT 278 A V A I +G S +A++PDG YVA+CG+ + G + +IDT T Sbjct 664 ---------DAETKNVTAAIKVGRSPYGIAVTPDGTKVYVANCGNNENLGKTISIIDTAT 714 Query 279 HQI 281 +++ Sbjct 715 NRV 717 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 86/335 (26%), Positives = 151/335 (46%), Gaps = 36/335 (10%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG+ + V N + ++SV+ T T V TV P IA+ N E +AYV+ V Sbjct 204 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV-NPEGTKAYVTNVD 262 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 ++ ++VID TN + P+ + + ++PD K +YV+ + V+V+DT T + Sbjct 263 KYFNTVSVIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN--TVSVIDTATNTI 320 Query 161 IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSG---GLLVVITTRAQSDGGRIGSRSR 217 + V + P + Q + P V Y A+ S G + + +D + + + Sbjct 321 TATMAVGKNPYASGQFIGSIPVQPV-YPSADFKSNITSGYIFLSEPVQFTDLSKDATEWK 379 Query 218 ------SRQKSSKPRGNQAAAGL---RVVATIDIGS----SVRDVAL--SPDGAIAYVAS 262 S K P + G+ R+ + G+ S +V L SP + AY+ Sbjct 380 WDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPSYAYITG 439 Query 263 CGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSED-----RVTVL 317 S+ V V +T + + + +G V++S D R Y+ + + V+V+ Sbjct 440 LNSN---TVSVFNTGNNTLAKTV---PVGNDPMGVAISPDGTRVYVTNTNYGYRGSVSVI 493 Query 318 CTRTHDVIGTIRTGQ---PSCVVESPDGKYLYIAD 349 T +VI + G P + +PDGK LY++D Sbjct 494 DTARGEVITIVDVGNKYSPCGIAVTPDGKKLYVSD 528 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 103/429 (25%), Positives = 166/429 (39%), Gaps = 123/429 (28%) Query 31 KIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFA------- 83 +IPV P GIA++ DG + V + +TVSV+ T T +T T+ P+A Sbjct 281 RIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGS 339 Query 84 IAMGNAEANRAYVSTVSSAY----DAIAVIDVA-----------------------TNTV 116 I + + + S ++S Y + + D++ T + Sbjct 340 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSE 399 Query 117 LGTHPLALSVSD--------------LTLSPDDKYLYVSRNGTRGADVAVLDTTTGALID 162 G + + L+VS+ L SP Y Y++ G V+V +T L Sbjct 400 TGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPSYAYIT--GLNSNTVSVFNTGNNTLAK 457 Query 163 VVDVSQAPGTTTQCVRMSPDGSVLYVGAN--GPSGGLLVVITTRAQ----SDGGRIGSRS 216 V V P V +SPDG+ +YV G G + V+ T R + D +G++ Sbjct 458 TVPVGNDP----MGVAISPDGTRVYVTNTNYGYRGSVSVIDTARGEVITIVD---VGNKY 510 Query 217 RSRQKSSKPRGNQAAAGLR--------------VVATIDIGSSVRDVALSPDGAIAYVAS 262 + P G + R V AT+ G + VA++PDG AYVA+ Sbjct 511 SPCGIAVTPDGKKLYVSDRDINGVSVIDTSTNTVTATVPAGINPLGVAITPDGRKAYVAN 570 Query 263 --------------------------CGSDFGA-------------VVDVIDTRTHQITS 283 CG F V VIDT T+ +T Sbjct 571 RYSNNVSVIDTVTNNEIAAVKVGTGPCGVSFNQDGTRLYVTNCESNSVSVIDTATNTVTD 630 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTGQ-PSCVVESP 340 + A+ + VSVS D + Y+ +E + V+V+ T +V I+ G+ P + +P Sbjct 631 TLAVEK---WPLGVSVSPDGTKIYVANERSNNVSVIDAETKNVTAAIKVGRSPYGIAVTP 687 Query 341 DGKYLYIAD 349 DG +Y+A+ Sbjct 688 DGTKVYVAN 696 Score = 40.4 bits (93), Expect = 0.54, Method: Compositional matrix adjust. Identities = 30/101 (30%), Positives = 51/101 (51%), Gaps = 10/101 (9%) Query 28 AVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMG 87 AV K P+ G+++S DG+ + V N ++ VSV+ +T VT + P+ IA+ Sbjct 633 AVEKWPL------GVSVSPDGTKIYVANERSNNVSVIDAETKNVTAAIKVGRSPYGIAV- 685 Query 88 NAEANRAYVSTVSSAYD---AIAVIDVATNTVLGTHPLALS 125 + + YV+ + + I++ID ATN V+ T S Sbjct 686 TPDGTKVYVANCGNNENLGKTISIIDTATNRVIATEKAGFS 726 >gi|15082090|gb|AAK84029.1|AF394229_1 surface antigen [Methanosarcina mazei] Length=1673 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 89/303 (30%), Positives = 154/303 (51%), Gaps = 46/303 (15%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P+G + IS DG+ + V N ++ VS++ T T V TV + + P +A+ + + Sbjct 70 IPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV-SPDG 127 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 + YV+ ++S+ ++VID +NTV GT S L LSPD K LYV+ NG + V+ Sbjct 128 KQVYVTNMASS--TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK--TVS 183 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V++T T A+I+ V V ++P + + ++PDG+ +YV AN S + V+ T Sbjct 184 VINTVTKAVINTVSVGRSP----KGIAVTPDGTKVYV-ANFDSMSISVIDTVTNS----- 233 Query 212 IGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVV 271 V+ T+ + ++ +A++P+G AYV + F V Sbjct 234 ------------------------VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFN-TV 268 Query 272 DVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIR 329 +IDT T++IT A +G ++V+ D + Y+ + V+V+ T T+ + T+ Sbjct 269 SMIDTGTNKIT---ARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 325 Query 330 TGQ 332 G+ Sbjct 326 VGK 328 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 82/338 (25%), Positives = 161/338 (48%), Gaps = 51/338 (15%) Query 49 SLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAV 108 + + N+ +D +SV+ + +VT T+ + P A+ + + + YV+ S + +++ Sbjct 44 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMG-AVISPDGTKVYVANAHS--NDVSI 100 Query 109 IDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQ 168 ID ATN V+ T P S + +SPD K +YV+ + + ++V+DTT+ + V + Sbjct 101 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTGK 158 Query 169 APGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGN 228 +P + +SPDG LYV NG ++ T+A Sbjct 159 SP----LGLALSPDGKKLYVTNNGDKTVSVINTVTKA----------------------- 191 Query 229 QAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAIS 288 V+ T+ +G S + +A++PDG YVA+ S + VIDT T+ + + Sbjct 192 -------VINTVSVGRSPKGIAVTPDGTKVYVANFDS---MSISVIDTVTNSVIDTV--- 238 Query 289 EIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCVVESPDGK 343 ++ + ++V+ + +AY+ + D+ V+++ T T+ + I G P+ + +PDGK Sbjct 239 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGK 298 Query 344 YLYIA-DYSGTITRTAVASTIVSGTEQLALQRRGSMQW 380 +Y+A + T++ A+ ++ T + S Q+ Sbjct 299 KVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQF 336 Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 70/243 (29%), Positives = 113/243 (47%), Gaps = 41/243 (16%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG L V++ + VSV+ T T VT TV + P +A+ + +AYV+ Sbjct 514 GIAVTPDGKKLYVSDRDINGVSVIDTSTNTVTATVPAGINPLGVAI-TPDGRKAYVANRY 572 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 S + ++VID TN + + ++ + D LYV+ V+V+DT T + Sbjct 573 S--NNVSVIDTVTNNEIAAVKVGTGPCGVSFNQDGTRLYVTN--CESNSVSVIDTATNTV 628 Query 161 IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQ 220 D + V + P V +SPDG+ +YV AN S + V+ Sbjct 629 TDTLAVEKWP----LGVSVSPDGTKIYV-ANERSNNVSVI-------------------- 663 Query 221 KSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGS--DFGAVVDVIDTRT 278 A V A I +G S +A++PDG YVA+CG+ + G + +IDT T Sbjct 664 ---------DAETKNVTAAIKVGRSPYGIAVTPDGTKVYVANCGNNENLGKTISIIDTAT 714 Query 279 HQI 281 +++ Sbjct 715 NRV 717 Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 85/335 (26%), Positives = 151/335 (46%), Gaps = 36/335 (10%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG+ + V N + ++SV+ T T V TV P IA+ N E +AYV+ V Sbjct 204 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV-NPEGTKAYVTNVD 262 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 ++ +++ID TN + P+ + + ++PD K +YV+ + V+V+DT T + Sbjct 263 KYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN--TVSVIDTATNTI 320 Query 161 IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSG---GLLVVITTRAQSDGGRIGSRSR 217 + V + P + Q + P V Y A+ S G + + +D + + + Sbjct 321 TATMAVGKNPYASGQFIGSIPVQPV-YPSADFKSNITSGYIFLSEPVQFTDLSKDATEWK 379 Query 218 ------SRQKSSKPRGNQAAAGL---RVVATIDIGS----SVRDVAL--SPDGAIAYVAS 262 S K P + G+ R+ + G+ S +V L SP + AY+ Sbjct 380 WDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPSYAYITG 439 Query 263 CGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSED-----RVTVL 317 S+ V V +T + + + +G V++S D R Y+ + + V+V+ Sbjct 440 LNSN---TVSVFNTGNNTLAKTV---PVGNDPMGVAISPDGTRVYVTNTNYGYRGSVSVI 493 Query 318 CTRTHDVIGTIRTGQ---PSCVVESPDGKYLYIAD 349 T +VI + G P + +PDGK LY++D Sbjct 494 DTARGEVITIVDVGNKYSPCGIAVTPDGKKLYVSD 528 Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 103/429 (25%), Positives = 166/429 (39%), Gaps = 123/429 (28%) Query 31 KIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFA------- 83 +IPV P GIA++ DG + V + +TVSV+ T T +T T+ P+A Sbjct 281 RIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGS 339 Query 84 IAMGNAEANRAYVSTVSSAY----DAIAVIDVA-----------------------TNTV 116 I + + + S ++S Y + + D++ T + Sbjct 340 IPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSE 399 Query 117 LGTHPLALSVSD--------------LTLSPDDKYLYVSRNGTRGADVAVLDTTTGALID 162 G + + L+VS+ L SP Y Y++ G V+V +T L Sbjct 400 TGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPSYAYIT--GLNSNTVSVFNTGNNTLAK 457 Query 163 VVDVSQAPGTTTQCVRMSPDGSVLYVGAN--GPSGGLLVVITTRAQ----SDGGRIGSRS 216 V V P V +SPDG+ +YV G G + V+ T R + D +G++ Sbjct 458 TVPVGNDP----MGVAISPDGTRVYVTNTNYGYRGSVSVIDTARGEVITIVD---VGNKY 510 Query 217 RSRQKSSKPRGNQAAAGLR--------------VVATIDIGSSVRDVALSPDGAIAYVAS 262 + P G + R V AT+ G + VA++PDG AYVA+ Sbjct 511 SPCGIAVTPDGKKLYVSDRDINGVSVIDTSTNTVTATVPAGINPLGVAITPDGRKAYVAN 570 Query 263 --------------------------CGSDFGA-------------VVDVIDTRTHQITS 283 CG F V VIDT T+ +T Sbjct 571 RYSNNVSVIDTVTNNEIAAVKVGTGPCGVSFNQDGTRLYVTNCESNSVSVIDTATNTVTD 630 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTGQ-PSCVVESP 340 + A+ + VSVS D + Y+ +E + V+V+ T +V I+ G+ P + +P Sbjct 631 TLAVEK---WPLGVSVSPDGTKIYVANERSNNVSVIDAETKNVTAAIKVGRSPYGIAVTP 687 Query 341 DGKYLYIAD 349 DG +Y+A+ Sbjct 688 DGTKVYVAN 696 Score = 40.4 bits (93), Expect = 0.55, Method: Compositional matrix adjust. Identities = 30/101 (30%), Positives = 51/101 (51%), Gaps = 10/101 (9%) Query 28 AVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMG 87 AV K P+ G+++S DG+ + V N ++ VSV+ +T VT + P+ IA+ Sbjct 633 AVEKWPL------GVSVSPDGTKIYVANERSNNVSVIDAETKNVTAAIKVGRSPYGIAV- 685 Query 88 NAEANRAYVSTVSSAYD---AIAVIDVATNTVLGTHPLALS 125 + + YV+ + + I++ID ATN V+ T S Sbjct 686 TPDGTKVYVANCGNNENLGKTISIIDTATNRVIATEKAGFS 726 >gi|1213021|emb|CAA59198.1| unnamed protein product [Methanosarcina mazei] Length=491 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 87/275 (32%), Positives = 143/275 (52%), Gaps = 33/275 (12%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P+G + IS DG+ + V N ++ VS++ T T V TV + + P +A+ + + Sbjct 70 IPVGSNPMGAV-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV-SPDG 127 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 + YV+ ++S+ ++VID +NTV GT S L LSPD K LYV+ NG + V+ Sbjct 128 KQVYVTNMASS--TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK--TVS 183 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVIT-TRAQSDGG 210 V++T T A+I+ V V ++P + + ++PDG+ +YV AN S + V+ T T + D Sbjct 184 VINTVTKAVINTVSVGRSP----KGIAVTPDGTKVYV-ANFDSMSISVIDTVTNSVIDTV 238 Query 211 RIGSRSRSRQKSSKPRGNQA----------------AAGLRVVATIDIGSSVRDVALSPD 254 ++ + + P G +A ++ A I +G +A++PD Sbjct 239 KV--EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPD 296 Query 255 GAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISE 289 G YVA F V VIDT T+ IT++ A+ + Sbjct 297 GKKVYVALS---FCNTVSVIDTATNTITATMAVGK 328 Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust. Identities = 82/338 (25%), Positives = 161/338 (48%), Gaps = 51/338 (15%) Query 49 SLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAV 108 + + N+ +D +SV+ + +VT T+ + P A+ + + + YV+ S + +++ Sbjct 44 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPMG-AVISPDGTKVYVANAHS--NDVSI 100 Query 109 IDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQ 168 ID ATN V+ T P S + +SPD K +YV+ + + ++V+DTT+ + V + Sbjct 101 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKTGK 158 Query 169 APGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGN 228 +P + +SPDG LYV NG ++ T+A Sbjct 159 SP----LGLALSPDGKKLYVTNNGDKTVSVINTVTKA----------------------- 191 Query 229 QAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAIS 288 V+ T+ +G S + +A++PDG YVA+ S + VIDT T+ + + Sbjct 192 -------VINTVSVGRSPKGIAVTPDGTKVYVANFDS---MSISVIDTVTNSVIDTV--- 238 Query 289 EIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCVVESPDGK 343 ++ + ++V+ + +AY+ + D+ V+++ T T+ + I G P+ + +PDGK Sbjct 239 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGK 298 Query 344 YLYIA-DYSGTITRTAVASTIVSGTEQLALQRRGSMQW 380 +Y+A + T++ A+ ++ T + S Q+ Sbjct 299 KVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQF 336 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/141 (30%), Positives = 74/141 (53%), Gaps = 3/141 (2%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG+ + V N + ++SV+ T T V TV P IA+ N E +AYV+ V Sbjct 204 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAV-NPEGTKAYVTNVD 262 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 ++ +++ID TN + P+ + + ++PD K +YV+ + V+V+DT T + Sbjct 263 KYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCN--TVSVIDTATNTI 320 Query 161 IDVVDVSQAPGTTTQCVRMSP 181 + V + P + Q + P Sbjct 321 TATMAVGKNPYASGQFIGSIP 341 >gi|345134863|dbj|BAK64644.1| spiroacetal synthase [Streptomyces sp. SN-593] Length=336 Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 108/354 (31%), Positives = 162/354 (46%), Gaps = 69/354 (19%) Query 30 VKIPVQGGPIGGIAISRDGSLLVVTNNGT-------DTVSVVGTDTCRVTQTVTSVNEPF 82 V IPV GP +A++ DG+ VTN G DTVSV+ T T V TV P Sbjct 14 VTIPVGEGP-SAVALTPDGTRAYVTNYGRWATHSPGDTVSVIDTATHEVVATVKVGVGPT 72 Query 83 AIAMGNAEANRAYVSTVSSAYDA---IAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLY 139 A+ + + +R YV S + ++VID AT+ V+ T + S + ++PD + +Y Sbjct 73 ALEV-VPDGSRVYVVNYGSGKEPGHTVSVIDTATHEVVATVEVGNSPDGVAVTPDGRRVY 131 Query 140 VSRNGTR---GADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGG 196 +S G+ G ++V+DT T ++ VDV APG V + DG YV G Sbjct 132 ISELGSEANPGNTMSVIDTATFEVVGTVDVGAAPG----AVAIHEDGVHAYVVNYG---- 183 Query 197 LLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVAT------IDIGSSVRDVA 250 KP + + +AT + +G S VA Sbjct 184 ---------------------------KPTETEGTVSVIDIATNTVVTTVTVGRSPGAVA 216 Query 251 LSPDGAIAYVASCGS--DFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYL 308 ++PDGA AYVA G D G V VIDTRTH++ S + +G V++S D RAY+ Sbjct 217 ITPDGAHAYVADHGPFGDPGNTVSVIDTRTHEVAS---VITVGPGPGGVAISPDGTRAYV 273 Query 309 VSED-------RVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIADYSGTI 354 V+ ++V+ T T V+ T+ + P+ + S DG+ YIA+Y + Sbjct 274 VNMGGNTAPGRTMSVIDTATRTVVNTVAVERTPAGIAVSADGRRAYIANYGANL 327 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/127 (36%), Positives = 65/127 (52%), Gaps = 15/127 (11%) Query 235 RVVATIDIGSSVRDVALSPDGAIAYVASCG----SDFGAVVDVIDTRTHQITSSRAISEI 290 V TI +G VAL+PDG AYV + G G V VIDT TH++ A ++ Sbjct 11 HVEVTIPVGEGPSAVALTPDGTRAYVTNYGRWATHSPGDTVSVIDTATHEVV---ATVKV 67 Query 291 GGLVTRVSVSGDADRAYLVSE-------DRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDG 342 G T + V D R Y+V+ V+V+ T TH+V+ T+ G P V +PDG Sbjct 68 GVGPTALEVVPDGSRVYVVNYGSGKEPGHTVSVIDTATHEVVATVEVGNSPDGVAVTPDG 127 Query 343 KYLYIAD 349 + +YI++ Sbjct 128 RRVYISE 134 >gi|20090753|ref|NP_616828.1| hypothetical protein MA1904 [Methanosarcina acetivorans C2A] gi|19915811|gb|AAM05308.1| hypothetical protein MA_1904 [Methanosarcina acetivorans C2A] Length=1698 Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 94/342 (28%), Positives = 161/342 (48%), Gaps = 51/342 (14%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 ++I+ +TN ++++SV+ T +V T+ + P +A+ N + + YV+ S Sbjct 61 VSIAGASPFAYITNEESNSISVIDVSTNKVAATIPVGSNPVGVAI-NPDGTKVYVANDHS 119 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VID ATN V T P S + +SPD K +YV+ G ++V+DTT+ ++ Sbjct 120 --NDVSVIDTATNAVTATVPAGSSPQGIAVSPDGKTIYVAN--LAGNSISVIDTTSNTVV 175 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 V + P V +SPDG +YV N + ++ T Sbjct 176 STVKTGRNP----TGVAVSPDGKKVYV-TNSEDKTVSIIDT------------------- 211 Query 222 SSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQI 281 A V++T+ +G R++A++PDGA YVA+ SD G V VID T+ + Sbjct 212 ----------ATKVVISTVSVGKDPREIAVTPDGAKVYVAN--SDSG-TVSVIDVSTNSV 258 Query 282 TSSRAISEIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCV 336 T + ++ G V+V+ D + Y+ + D+ V V+ T+ V TI G P V Sbjct 259 TDTV---KVEGAPFGVAVTPDGAKVYVTNYDQYFSTVAVIDVATNKVTATIPVGPDPVGV 315 Query 337 VESPDGKYLYIA-DYSGTITRTAVASTIVSGTEQLALQRRGS 377 +PDG +Y+A + T++ A+ V+ T + R S Sbjct 316 AVTPDGTKVYVAINLCNTVSVIDTATNTVTATMPVGKSPRAS 357 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 89/304 (30%), Positives = 155/304 (51%), Gaps = 48/304 (15%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P+G +AI+ DG+ + V N+ ++ VSV+ T T VT TV + + P IA+ + + Sbjct 94 IPVGSNPVG-VAINPDGTKVYVANDHSNDVSVIDTATNAVTATVPAGSSPQGIAV-SPDG 151 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 YV+ + A ++I+VID +NTV+ T + + + +SPD K +YV+ + V+ Sbjct 152 KTIYVANL--AGNSISVIDTTSNTVVSTVKTGRNPTGVAVSPDGKKVYVTN--SEDKTVS 207 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVV-ITTRAQSDGG 210 ++DT T +I V V + P + + ++PDG+ +YV AN SG + V+ ++T + +D Sbjct 208 IIDTATKVVISTVSVGKDP----REIAVTPDGAKVYV-ANSDSGTVSVIDVSTNSVTD-- 260 Query 211 RIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAV 270 T+ + + VA++PDGA YV + F + Sbjct 261 ----------------------------TVKVEGAPFGVAVTPDGAKVYVTNYDQYF-ST 291 Query 271 VDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTI 328 V VID T+++T A +G V+V+ D + Y+ + V+V+ T T+ V T+ Sbjct 292 VAVIDVATNKVT---ATIPVGPDPVGVAVTPDGTKVYVAINLCNTVSVIDTATNTVTATM 348 Query 329 RTGQ 332 G+ Sbjct 349 PVGK 352 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 90/339 (27%), Positives = 148/339 (44%), Gaps = 46/339 (13%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 IA++ DG+ + V N+ + TVSV+ T VT TV PF +A+ + + YV+ Sbjct 229 IAVTPDGAKVYVANSDSGTVSVIDVSTNSVTDTVKVEGAPFGVAV-TPDGAKVYVTNYDQ 287 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + +AVIDVATN V T P+ + ++PD +YV+ N V+V+DT T + Sbjct 288 YFSTVAVIDVATNKVTATIPVGPDPVGVAVTPDGTKVYVAINLCN--TVSVIDTATNTVT 345 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVIT------------------- 202 + V ++P + + + P V PS IT Sbjct 346 ATMPVGKSPRASGRFIGSVPVQPVY------PSANFNNNITSDYVFLSVPVQFTDLSENA 399 Query 203 TRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAI----A 258 T+ D G + + + L V + S + V + P G++ A Sbjct 400 TKWNWDFGDGFTSIKQNPVHTYSEVGTYTVKLTVSNSNGTDSKLTTVNVVPKGSLAPSYA 459 Query 259 YVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSE-----DR 313 Y+A+ S+ V VI+T +T++ + IG L V+ S D R Y+ + Sbjct 460 YIANLNSN---TVSVINTGNSSLTTTVPVG-IGPL--GVAASPDGTRIYVTNSFYNYRGT 513 Query 314 VTVLCTRTHDVIGTIRTG---QPSCVVESPDGKYLYIAD 349 V+V+ T ++VI T+ G P + +PDGK LY+A+ Sbjct 514 VSVIDTALNEVIATVDIGDKYSPCGIAVTPDGKKLYVAN 552 Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust. Identities = 76/272 (28%), Positives = 135/272 (50%), Gaps = 35/272 (12%) Query 32 IPVQGGPIGGIAISRDGSLLVVTN---NGTDTVSVVGTDTCRVTQTVTSVNE--PFAIAM 86 +PV GP+G +A S DG+ + VTN N TVSV+ T V TV ++ P IA+ Sbjct 483 VPVGIGPLG-VAASPDGTRIYVTNSFYNYRGTVSVIDTALNEVIATVDIGDKYSPCGIAV 541 Query 87 GNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTR 146 + + YV+ + D ++VID + NTV+ T P+ ++ + +PD +YV+ + Sbjct 542 -TPDGKKLYVA--NRDIDGVSVIDTSINTVIATIPVGINPLGVAANPDGTKVYVTNRYSN 598 Query 147 GADVAVLDTTTGALIDVVDVSQAPGTTTQC-VRMSPDGSVLYVGANGPSGGLLVVITTRA 205 +V+V+DT T ++ V P C + ++ +G+ LYV AN + +I T + Sbjct 599 --NVSVIDTATNKVVATVKTGSGP-----CGITVNQEGTNLYV-ANC-ENNTISIIDTGS 649 Query 206 QSDGGRIGSRSRSRQKSSKPRG------NQAAAGLRVV--------ATIDIGSSVRDVAL 251 + + + + + P G N+ + + V+ A + +G +A+ Sbjct 650 NTATASVPAGTWPMGVAVSPDGTKVYVANERSNNVSVIDLATKTDIAAVKVGRCPYGIAV 709 Query 252 SPDGAIAYVASCGS--DFGAVVDVIDTRTHQI 281 +PDG YVA+CG+ + G V +IDT T+++ Sbjct 710 TPDGTRVYVANCGNNQNLGKTVSIIDTATNKV 741 Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust. Identities = 85/328 (26%), Positives = 153/328 (47%), Gaps = 51/328 (15%) Query 53 VTNNGTDTVSVVGTDTCRVT--------QTVTSVNEPFAIAMGNAEANRAYVSTVSSAYD 104 + N T S VGT T ++T +T+VN + G+ + AY++ ++S + Sbjct 413 IKQNPVHTYSEVGTYTVKLTVSNSNGTDSKLTTVN---VVPKGSLAPSYAYIANLNS--N 467 Query 105 AIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRN--GTRGADVAVLDTTTGALID 162 ++VI+ +++ T P+ + + SPD +YV+ + RG V+V+DT +I Sbjct 468 TVSVINTGNSSLTTTVPVGIGPLGVAASPDGTRIYVTNSFYNYRGT-VSVIDTALNEVIA 526 Query 163 VVDVSQAPGTTTQC-VRMSPDGSVLYVGANGPSGGLLVVITT-----------------R 204 VD+ + C + ++PDG LYV AN G+ V+ T+ Sbjct 527 TVDIGDK---YSPCGIAVTPDGKKLYV-ANRDIDGVSVIDTSINTVIATIPVGINPLGVA 582 Query 205 AQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCG 264 A DG ++ +R S A +VVAT+ GS + ++ +G YVA+C Sbjct 583 ANPDGTKVYVTNRYSNNVSV----IDTATNKVVATVKTGSGPCGITVNQEGTNLYVANCE 638 Query 265 SDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTH 322 ++ + +IDT ++ T+S G V+VS D + Y+ +E + V+V+ T Sbjct 639 NN---TISIIDTGSNTATASV---PAGTWPMGVAVSPDGTKVYVANERSNNVSVIDLATK 692 Query 323 DVIGTIRTGQ-PSCVVESPDGKYLYIAD 349 I ++ G+ P + +PDG +Y+A+ Sbjct 693 TDIAAVKVGRCPYGIAVTPDGTRVYVAN 720 Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 55/185 (30%), Positives = 95/185 (52%), Gaps = 11/185 (5%) Query 5 NGREVARESRDAQ-VFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSV 63 +G+++ +RD V T+ + + IPV P+G +A + DG+ + VTN ++ VSV Sbjct 544 DGKKLYVANRDIDGVSVIDTSINTVIATIPVGINPLG-VAANPDGTKVYVTNRYSNNVSV 602 Query 64 VGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLA 123 + T T +V TV + + P I + N E YV+ + + I++ID +NT + P Sbjct 603 IDTATNKVVATVKTGSGPCGITV-NQEGTNLYVANCEN--NTISIIDTGSNTATASVPAG 659 Query 124 LSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDG 183 + +SPD +YV+ R +V+V+D T I V V + P + ++PDG Sbjct 660 TWPMGVAVSPDGTKVYVANE--RSNNVSVIDLATKTDIAAVKVGRCP----YGIAVTPDG 713 Query 184 SVLYV 188 + +YV Sbjct 714 TRVYV 718 Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust. Identities = 38/123 (31%), Positives = 63/123 (52%), Gaps = 9/123 (7%) Query 239 TIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTR-- 296 T+ +G VA SPDG YV + ++ V VIDT +++ A +IG + Sbjct 482 TVPVGIGPLGVAASPDGTRIYVTNSFYNYRGTVSVIDTALNEVI---ATVDIGDKYSPCG 538 Query 297 VSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIAD-YSG 352 ++V+ D + Y+ + D V+V+ T + VI TI G P V +PDG +Y+ + YS Sbjct 539 IAVTPDGKKLYVANRDIDGVSVIDTSINTVIATIPVGINPLGVAANPDGTKVYVTNRYSN 598 Query 353 TIT 355 ++ Sbjct 599 NVS 601 >gi|229155904|ref|ZP_04284005.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus ATCC 4342] gi|228627511|gb|EEK84237.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus ATCC 4342] Length=533 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 93/309 (31%), Positives = 146/309 (48%), Gaps = 54/309 (17%) Query 50 LLVVTNNG------TDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAY 103 L+ VTN G DTVSV+ T T V T+T N P + + + RAYV+ + S Sbjct 234 LVYVTNAGAIDDPTNDTVSVINTGTNTVVDTITVGNAPLEVTV-SPNGARAYVTNIFS-- 290 Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VID ATNTV+ T P+ + +SP++ +YV + + DV+V++ T +ID Sbjct 291 DTVSVIDTATNTVIATIPVGADPIGVAVSPNNTTVYVGNHASN--DVSVINAATNTVIDT 348 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V AP Q + +SP+G+ YV AN S + V+ T Sbjct 349 IPVGIAP----QGITVSPNGAFAYV-ANELSNNISVINT--------------------- 382 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 A V ATI +G R + + DG AYV + S+ V VI+T T+ + + Sbjct 383 --------ATNTVSATIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNTVIN 431 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESP 340 + +G + ++ D R Y+V++ + V+V+ T+ VI TI P V P Sbjct 432 TIG---VGSEPVGIDITPDGTRIYVVNKVSNNVSVISVATNTVIDTIPVALSPDQVTIIP 488 Query 341 DGKYLYIAD 349 DG Y+ + Sbjct 489 DGTLAYVTN 497 Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust. Identities = 50/129 (39%), Positives = 73/129 (57%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ +EP I + + R YV V+ Sbjct 400 IVFTLDGTRAYVTNQNSNTVSVINTATNTVINTIGVGSEPVGIDI-TPDGTRIYV--VNK 456 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI VATNTV+ T P+ALS +T+ PD YV+ G+ V+V++T T +I Sbjct 457 VSNNVSVISVATNTVIDTIPVALSPDQVTIIPDGTLAYVTNQGSN--TVSVINTATNTVI 514 Query 162 DVVDVSQAP 170 D V V AP Sbjct 515 DTVPVGVAP 523 Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 74/274 (28%), Positives = 135/274 (50%), Gaps = 48/274 (17%) Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VI+ TNTV+ T + + ++T+SP+ YV+ V+V+DT T +I Sbjct 249 DTVSVINTGTNTVVDTITVGNAPLEVTVSPNGARAYVTN--IFSDTVSVIDTATNTVIAT 306 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V P V +SP+ + +YVG A +D I + + + Sbjct 307 IPVGADP----IGVAVSPNNTTVYVG-------------NHASNDVSVINAATNT----- 344 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 V+ TI +G + + + +SP+GA AYVA ++ + VI+T T+ +++ Sbjct 345 ------------VIDTIPVGIAPQGITVSPNGAFAYVA---NELSNNISVINTATNTVSA 389 Query 284 SRAISEIGGLVTRVSV-SGDADRAYLVSEDR--VTVLCTRTHDVIGTIRTG-QPSCVVES 339 + + G+ R+ V + D RAY+ +++ V+V+ T T+ VI TI G +P + + Sbjct 390 TIPV----GIRPRIIVFTLDGTRAYVTNQNSNTVSVINTATNTVINTIGVGSEPVGIDIT 445 Query 340 PDGKYLYIAD-YSGTITRTAVASTIVSGTEQLAL 372 PDG +Y+ + S ++ +VA+ V T +AL Sbjct 446 PDGTRIYVVNKVSNNVSVISVATNTVIDTIPVAL 479 Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 69/254 (28%), Positives = 121/254 (48%), Gaps = 28/254 (11%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN +DTVSV+ T T V T+ +P +A+ N V + Sbjct 274 VTVSPNGARAYVTNIFSDTVSVIDTATNTVIATIPVGADPIGVAV---SPNNTTVYVGNH 330 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 A + ++VI+ ATNTV+ T P+ ++ +T+SP+ + YV+ + +++V++T T + Sbjct 331 ASNDVSVINAATNTVIDTIPVGIAPQGITVSPNGAFAYVANELSN--NISVINTATNTVS 388 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + IG S Sbjct 389 ATIPVGIRP----RIIVFTLDGTRAYVTNQ--NSNTVSVINTATNTVINTIGVGSEPVGI 442 Query 222 SSKPRG------NQAAAGLRVVA--------TIDIGSSVRDVALSPDGAIAYVASCGSDF 267 P G N+ + + V++ TI + S V + PDG +AYV + GS+ Sbjct 443 DITPDGTRIYVVNKVSNNVSVISVATNTVIDTIPVALSPDQVTIIPDGTLAYVTNQGSN- 501 Query 268 GAVVDVIDTRTHQI 281 V VI+T T+ + Sbjct 502 --TVSVINTATNTV 513 >gi|229017757|ref|ZP_04174645.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus AH1273] gi|228743545|gb|EEL93657.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus AH1273] Length=345 Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 96/330 (30%), Positives = 156/330 (48%), Gaps = 49/330 (14%) Query 59 DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLG 118 DTVSV+ T T V T+T N P +A+ RAYV+ + S + ++VID ATNTV+ Sbjct 61 DTVSVINTGTNTVVDTITVDNAPLEVAVS-PNGTRAYVTNIFS--NTVSVIDTATNTVIA 117 Query 119 THPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVR 178 T P+ + + +SP++ +YV +G V+V++ T ++ ++V AP Q + Sbjct 118 TIPVGANPIGVAVSPNNTTVYVGNHGNN--TVSVINAATNTVVGTINVGIAP----QGIT 171 Query 179 MSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVA 238 +SP+GS+ YV AN S + V+ A A VV Sbjct 172 VSPNGSLAYV-ANELSNTISVI-----------------------------ATATNTVVG 201 Query 239 TIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVS 298 TI++G R + + DG AYV + S+ V VI+T T+ + + +G ++ Sbjct 202 TINVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNSVIDTI---NVGTEPVGIA 255 Query 299 VSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIADY-SGTI 354 ++ D R Y+V++ + V+V+ T T+ VI TI P V PDG Y+ + S T+ Sbjct 256 ITPDGARIYVVNKVSNNVSVISTLTNTVIDTIPVALSPDQVTIIPDGTRAYVTNQASNTV 315 Query 355 TRTAVASTIVSGTEQLALQRRGSMQWFSPE 384 + A+ V T + + G F E Sbjct 316 SVINTATNTVIDTVPVGVAPTGIATGFICE 345 Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 48/129 (38%), Positives = 70/129 (55%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ EP IA+ + R YV V+ Sbjct 212 IVFTLDGTRAYVTNQNSNTVSVINTATNSVIDTINVGTEPVGIAI-TPDGARIYV--VNK 268 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI TNTV+ T P+ALS +T+ PD YV+ + V+V++T T +I Sbjct 269 VSNNVSVISTLTNTVIDTIPVALSPDQVTIIPDGTRAYVTNQASN--TVSVINTATNTVI 326 Query 162 DVVDVSQAP 170 D V V AP Sbjct 327 DTVPVGVAP 335 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 70/259 (28%), Positives = 120/259 (47%), Gaps = 43/259 (16%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA + + IPV PI G+A+S + + + V N+G +TVSV+ T V T+ P Sbjct 110 TATNTVIATIPVGANPI-GVAVSPNNTTVYVGNHGNNTVSVINAATNTVVGTINVGIAPQ 168 Query 83 AIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSR 142 I + + AYV+ + + I+VI ATNTV+GT + + + + D YV+ Sbjct 169 GITVS-PNGSLAYVA--NELSNTISVIATATNTVVGTINVGIRPRIIVFTLDGTRAYVTN 225 Query 143 NGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVIT 202 + V+V++T T ++ID ++V GT + ++PDG+ +YV Sbjct 226 QNSN--TVSVINTATNSVIDTINV----GTEPVGIAITPDGARIYV-------------V 266 Query 203 TRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVAS 262 + ++ I + + + V+ TI + S V + PDG AYV + Sbjct 267 NKVSNNVSVISTLTNT-----------------VIDTIPVALSPDQVTIIPDGTRAYVTN 309 Query 263 CGSDFGAVVDVIDTRTHQI 281 S+ V VI+T T+ + Sbjct 310 QASN---TVSVINTATNTV 325 >gi|73670899|ref|YP_306914.1| hypothetical protein Mbar_A3461 [Methanosarcina barkeri str. Fusaro] gi|72398061|gb|AAZ72334.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro] Length=1667 Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 85/332 (26%), Positives = 161/332 (49%), Gaps = 51/332 (15%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 ++I+ +TN +++VSV+ T T +VT + + P + + N R YV V S Sbjct 30 VSIAGAAPFAYITNAESNSVSVIDTATNKVTAAIPVGSNPMGVVI-NPNGTRVYVGNVLS 88 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VID ATN V+ T + S + +SP+ +YV+ + +V+V+DTT ++ Sbjct 89 --NDVSVIDTATNNVITTVSVGNSPQGVAVSPNGNKVYVTNRYSN--NVSVIDTTANTVV 144 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 V+ + P + V +SPDG +YV T A + I + +++ Sbjct 145 STVNTGKYP----EGVAVSPDGKKIYV-------------TNYADNTVSIIDTATKA--- 184 Query 222 SSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQI 281 ++ T+ +G +++ ++PDG YV + G + +IDT T+ + Sbjct 185 --------------IITTVSVGKGPKEIVVTPDGNRVYVVNYD---GRSISIIDTATNSV 227 Query 282 TSSRAISEIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCV 336 T++ ++GG V+V+ D + Y+ + V+V+ T T+ +I TI G P + Sbjct 228 TNTV---KLGGTPFGVAVNPDGKKVYVTNNAEHFSTVSVIDTATNKIISTIPVGPDPVGI 284 Query 337 VESPDGKYLYIA-DYSGTITRTAVASTIVSGT 367 +PDGK +Y+A ++ T++ A+ V+ T Sbjct 285 SVTPDGKKVYVAINFYNTVSVIDTATNAVTAT 316 Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 96/325 (30%), Positives = 151/325 (47%), Gaps = 52/325 (16%) Query 12 ESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRV 71 ES V + TA IPV P+G + I+ +G+ + V N ++ VSV+ T T V Sbjct 45 ESNSVSVID--TATNKVTAAIPVGSNPMG-VVINPNGTRVYVGNVLSNDVSVIDTATNNV 101 Query 72 TQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTL 131 TV+ N P +A+ + N+ YV+ S + ++VID NTV+ T + + Sbjct 102 ITTVSVGNSPQGVAV-SPNGNKVYVTNRYS--NNVSVIDTTANTVVSTVNTGKYPEGVAV 158 Query 132 SPDDKYLYVSRNGTRGAD--VAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVG 189 SPD K +YV T AD V+++DT T A+I V V + P + + ++PDG+ +YV Sbjct 159 SPDGKKIYV----TNYADNTVSIIDTATKAIITTVSVGKGP----KEIVVTPDGNRVYV- 209 Query 190 ANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDV 249 DG RS S + A V T+ +G + V Sbjct 210 ---------------VNYDG-----RSISIIDT---------ATNSVTNTVKLGGTPFGV 240 Query 250 ALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLV 309 A++PDG YV + F + V VIDT T++I S+ +G +SV+ D + Y+ Sbjct 241 AVNPDGKKVYVTNNAEHF-STVSVIDTATNKIISTI---PVGPDPVGISVTPDGKKVYVA 296 Query 310 SE--DRVTVLCTRTHDVIGTIRTGQ 332 + V+V+ T T+ V T+ G Sbjct 297 INFYNTVSVIDTATNAVTATMLVGN 321 Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 82/307 (27%), Positives = 144/307 (47%), Gaps = 49/307 (15%) Query 49 SLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVS-TVSSAYDAIA 107 S +TN ++TVSV+ T +T TV EPF A+ N + + YV+ T ++ Sbjct 426 SYAFITNLNSNTVSVINTGNNTLTATVPVGTEPFGAAV-NPDGTKVYVTNTKYGERGTVS 484 Query 108 VIDVATNTVLGTHPLALSVSD--LTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVD 165 VID ATN V + S + ++PD K LYV+ + V+++DT+T + V Sbjct 485 VIDTATNKVTAIVDVGHKYSPCGIAVTPDGKKLYVADRDIKA--VSIIDTSTNTVTATVP 542 Query 166 VSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKP 225 V P V ++ DG +Y IT R + I + + Sbjct 543 VGVNP----LGVAITTDGKKVY-------------ITNRYSNTVSVIDTSTN-------- 577 Query 226 RGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSR 285 V++T+++GS V ++P G YV +C S+ + +I+ ++ +TS+ Sbjct 578 ---------NVISTVEVGSGPCGVTINPMGTELYVTNCESN---TISIIEISSNTVTSTV 625 Query 286 AISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDG 342 + E ++V+ D + Y+V+E + V+V+ T T VI T++ + P + +PDG Sbjct 626 PVGE---WPMGIAVTPDGKKVYVVNEGSNNVSVIDTATKTVIATVKVRKSPYGIAITPDG 682 Query 343 KYLYIAD 349 K +Y+A+ Sbjct 683 KKVYVAN 689 Score = 53.1 bits (126), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 85/342 (25%), Positives = 144/342 (43%), Gaps = 46/342 (13%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA + IPV P+G I+++ DG + V N +TVSV+ T T VT T+ N P+ Sbjct 266 TATNKIISTIPVGPDPVG-ISVTPDGKKVYVAINFYNTVSVIDTATNAVTATMLVGNSPY 324 Query 83 AIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSR 142 A ++ ++ + +PLA S++T Y+++S Sbjct 325 ASGQ--------FIGSIP---------------IQPVYPLANFSSNIT----SDYVFLS- 356 Query 143 NGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLY---VGANGPSGGLLV 199 V D + A V D G+T Q + + +Y + N +G Sbjct 357 -----VPVQFTDLSKNATKWVWDFGDGSGSTKQNPTHTYSTTGIYTVSLKVNNSNGTDSK 411 Query 200 VITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAY 259 + T G S + +S + AT+ +G+ A++PDG Y Sbjct 412 LATVNVVPKGSPAPSYAFITNLNSNTVSVINTGNNTLTATVPVGTEPFGAAVNPDGTKVY 471 Query 260 VASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTR--VSVSGDADRAYLVSED--RVT 315 V + V VIDT T+++T AI ++G + ++V+ D + Y+ D V+ Sbjct 472 VTNTKYGERGTVSVIDTATNKVT---AIVDVGHKYSPCGIAVTPDGKKLYVADRDIKAVS 528 Query 316 VLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIAD-YSGTIT 355 ++ T T+ V T+ G P V + DGK +YI + YS T++ Sbjct 529 IIDTSTNTVTATVPVGVNPLGVAITTDGKKVYITNRYSNTVS 570 >gi|254381507|ref|ZP_04996871.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194340416|gb|EDX21382.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=467 Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 92/285 (33%), Positives = 140/285 (50%), Gaps = 45/285 (15%) Query 7 REVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGT 66 R DA V TA + V +PV P+G +A+S DG+ VTN G DTVSV+ T Sbjct 56 RAYVTNRADATVSVINTATDTVVATVPVGLEPLG-VAVSPDGTRAYVTNYGADTVSVINT 114 Query 67 DTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSV 126 +T V TV + P +A+ + RAYV+ +S D ++VI+VATNTV+ T P+ Sbjct 115 NTNTVVATVPVGDAPIGVAV-SPSGTRAYVT--NSDADTVSVINVATNTVVATIPVGDFP 171 Query 127 SDLTLSPDDKYLYVSRNGTRGAD-VAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSV 185 + +SP YV+ + AD V+V++T T ++ V V P Q V +S DG+ Sbjct 172 FGVAVSPSGTRAYVTNSD---ADTVSVINTATNTVVATVPVGDVP----QGVAVSRDGTR 224 Query 186 LYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSS 245 YV N + + V+ T A VVAT+ +G + Sbjct 225 AYV-VNADADTVSVIDT-----------------------------ATNTVVATVPVGDA 254 Query 246 VRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEI 290 R+VA+SPDG AYV + D V VI+T T+ + ++ ++ ++ Sbjct 255 PREVAVSPDGTRAYVTNANDD---TVSVINTATNTVVATVSVGDL 296 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 98/306 (33%), Positives = 145/306 (48%), Gaps = 50/306 (16%) Query 48 GSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIA 107 G+ V N DTVSV+ T T V TV + P+ +A+ + RAYV+ + A ++ Sbjct 12 GTYAYVANFNDDTVSVIDTATNAVVVTVPVGDAPWEVAV-SPGGTRAYVTNRADA--TVS 68 Query 108 VIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGAD-VAVLDTTTGALIDVVDV 166 VI+ AT+TV+ T P+ L + +SPD YV+ GAD V+V++T T ++ V V Sbjct 69 VINTATDTVVATVPVGLEPLGVAVSPDGTRAYVTN---YGADTVSVINTNTNTVVATVPV 125 Query 167 SQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPR 226 AP V +SP G+ YV SD + + + Sbjct 126 GDAP----IGVAVSPSGTRAYV----------------TNSDADTVSVINVATNT----- 160 Query 227 GNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRA 286 VVATI +G VA+SP G AYV + +D V VI+T T+ + A Sbjct 161 ---------VVATIPVGDFPFGVAVSPSGTRAYVTNSDAD---TVSVINTATNTVV---A 205 Query 287 ISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGK 343 +G + V+VS D RAY+V+ D V+V+ T T+ V+ T+ G P V SPDG Sbjct 206 TVPVGDVPQGVAVSRDGTRAYVVNADADTVSVIDTATNTVVATVPVGDAPREVAVSPDGT 265 Query 344 YLYIAD 349 Y+ + Sbjct 266 RAYVTN 271 Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust. Identities = 35/101 (35%), Positives = 51/101 (51%), Gaps = 9/101 (8%) Query 253 PDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVS-- 310 P G AYVA+ D V VIDT T+ + + +G V+VS RAY+ + Sbjct 10 PPGTYAYVANFNDD---TVSVIDTATNAVVVT---VPVGDAPWEVAVSPGGTRAYVTNRA 63 Query 311 EDRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIADY 350 + V+V+ T T V+ T+ G +P V SPDG Y+ +Y Sbjct 64 DATVSVINTATDTVVATVPVGLEPLGVAVSPDGTRAYVTNY 104 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 27/65 (42%), Positives = 36/65 (56%), Gaps = 1/65 (1%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA + V +PV P +A+S DG+ VTN DTVSV+ T T V TV+ + PF Sbjct 240 TATNTVVATVPVGDAP-REVAVSPDGTRAYVTNANDDTVSVINTATNTVVATVSVGDLPF 298 Query 83 AIAMG 87 +A G Sbjct 299 GVATG 303 >gi|258590947|emb|CBE67242.1| conserved hypothetical protein; putative mxaE, involved in methanol dehydrogenase (mxaE2) [NC10 bacterium 'Dutch sediment'] Length=322 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 100/338 (30%), Positives = 157/338 (47%), Gaps = 62/338 (18%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112 VTN ++ +SV+ T + RV T+ + P +A+ + + +R Y++ +S + + VID A Sbjct 32 VTNEASNDLSVIDTASRRVVATIKVGDRPRGVAV-SPDGSRVYIANANS--NNLTVIDTA 88 Query 113 TNTVLGTHPLALS----VSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQ 168 T TV T P + + ++PD K LYV N G V+V+DT T L+ V V Sbjct 89 TLTVKATVPAGIEPEGDPEGIAVTPDGKQLYVV-NENPGT-VSVIDTATHQLVATVTVGV 146 Query 169 APGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGN 228 P + V +SPDG +YV N S + V+ T Sbjct 147 EP----ETVAVSPDGRWVYV-TNETSHDVHVIDT-------------------------- 175 Query 229 QAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAIS 288 + RV+A I +G++ R V+ +PDG AYV G + V VIDT ++ ++ + Sbjct 176 ---SADRVIAKIKVGANPRGVSFTPDGKRAYV---GCERDGTVSVIDTAARRVIATIPVG 229 Query 289 E--IGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIRTGQPSCVVE-SPDGK 343 E +G + VS D + Y+ V VL TRTH V+ I T + S V +PDG+ Sbjct 230 ERPVGTV-----VSHDGKKVYVAHGRSYEVWVLDTRTHQVLTKIPTQERSWWVALTPDGR 284 Query 344 YLYIADYSG------TITRTAVASTIVSGTEQLALQRR 375 LY+ + G T + +TI +GT+ + R Sbjct 285 ELYVTVHGGGRVAVIDTTHDRLLTTIPAGTKPWGVAVR 322 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 73/245 (30%), Positives = 111/245 (46%), Gaps = 44/245 (17%) Query 35 QGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRA 94 +G P GIA++ DG L V N TVSV+ T T ++ TVT EP +A+ + + Sbjct 103 EGDP-EGIAVTPDGKQLYVVNENPGTVSVIDTATHQLVATVTVGVEPETVAV-SPDGRWV 160 Query 95 YVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYV--SRNGTRGADVAV 152 YV+ +S +D + VID + + V+ + + ++ +PD K YV R+GT V+V Sbjct 161 YVTNETS-HD-VHVIDTSADRVIAKIKVGANPRGVSFTPDGKRAYVGCERDGT----VSV 214 Query 153 LDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRI 212 +DT +I + V + P T +S DG +YV A+G S + V+ TR +I Sbjct 215 IDTAARRVIATIPVGERPVGTV----VSHDGKKVYV-AHGRSYEVW-VLDTRTHQVLTKI 268 Query 213 GSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVD 272 ++ RS VAL+PDG YV G AV+D Sbjct 269 PTQERSWW----------------------------VALTPDGRELYVTVHGGGRVAVID 300 Query 273 VIDTR 277 R Sbjct 301 TTHDR 305 >gi|21229128|ref|NP_635050.1| hypothetical protein MM_3026 [Methanosarcina mazei Go1] gi|20907688|gb|AAM32722.1| hypothetical protein MM_3026 [Methanosarcina mazei Go1] Length=515 Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 97/333 (30%), Positives = 156/333 (47%), Gaps = 45/333 (13%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112 +TN G++ VSV+ T V V ++PF +A+ + + YV+ + S + I+VID A Sbjct 94 ITNGGSNNVSVIDTVNNTVIAVVDVGSDPFGVAVA-PDGKKVYVANMGS--NNISVIDTA 150 Query 113 TNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGT 172 TN+V T ++ + +SPD +YV + + +V+V+DT T V S G Sbjct 151 TNSVTDTIDAGINPRGIAVSPDGTKIYVVNSASN--NVSVIDTVTNN----VTASVTAGG 204 Query 173 TTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAA 232 V ++PDG+ +YV G IG+ + + N Sbjct 205 IPYGVAVNPDGTKVYV-------------------TNGDIGNENNTVSVIDTISNN---- 241 Query 233 GLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGG 292 V AT+ G VA++PDG YVA+ GSD V VIDT ++ IT+ I++ G Sbjct 242 ---VTATVTAGGIPYGVAVTPDGTKVYVANWGSDN---VSVIDTTSNNITARVNITKPIG 295 Query 293 LVTRVSVSGDADRAYLVS-EDRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIADY 350 ++VS D + Y+ + + ++V+ T + V T+ G PS V +PDGK +Y+ + Sbjct 296 ----ITVSPDGKKVYVTNVSNNLSVIDTANNTVTATVNVGSDPSGVAVTPDGKKVYVVNS 351 Query 351 -SGTITRTAVASTIVSGTEQLALQRRGSMQWFS 382 S ++ AS IV T R Q+ S Sbjct 352 GSNNVSVIDTASNIVIATVPTGNTPRAFGQFIS 384 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 80/311 (26%), Positives = 141/311 (46%), Gaps = 59/311 (18%) Query 71 VTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLT 130 + +T +S + PFA N + + TV++ IAV+DV G+ P ++V+ Sbjct 80 IKETPSSSSAPFAYITNGGSNNVSVIDTVNNT--VIAVVDV------GSDPFGVAVA--- 128 Query 131 LSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGA 190 PD K +YV+ G+ +++V+DT T ++ D +D P + + +SPDG+ +YV Sbjct 129 --PDGKKVYVANMGSN--NISVIDTATNSVTDTIDAGINP----RGIAVSPDGTKIYV-V 179 Query 191 NGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVA 250 N S + V+ T V A++ G VA Sbjct 180 NSASNNVSVIDTVTNN-----------------------------VTASVTAGGIPYGVA 210 Query 251 LSPDGAIAYVASCGSDFGA---VVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAY 307 ++PDG YV + D G V VIDT ++ +T A GG+ V+V+ D + Y Sbjct 211 VNPDGTKVYVTN--GDIGNENNTVSVIDTISNNVT---ATVTAGGIPYGVAVTPDGTKVY 265 Query 308 LVS--EDRVTVLCTRTHDVIGTIRTGQPSCVVESPDGKYLYIADYSGTITRTAVASTIVS 365 + + D V+V+ T ++++ + +P + SPDGK +Y+ + S ++ A+ V+ Sbjct 266 VANWGSDNVSVIDTTSNNITARVNITKPIGITVSPDGKKVYVTNVSNNLSVIDTANNTVT 325 Query 366 GTEQLALQRRG 376 T + G Sbjct 326 ATVNVGSDPSG 336 Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 68/234 (30%), Positives = 116/234 (50%), Gaps = 41/234 (17%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVST-- 98 GIA+S DG+ + V N+ ++ VSV+ T T VT +VT+ P+ +A+ N + + YV+ Sbjct 166 GIAVSPDGTKIYVVNSASNNVSVIDTVTNNVTASVTAGGIPYGVAV-NPDGTKVYVTNGD 224 Query 99 VSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTG 158 + + + ++VID +N V T + ++PD +YV+ G+ +V+V+DTT+ Sbjct 225 IGNENNTVSVIDTISNNVTATVTAGGIPYGVAVTPDGTKVYVANWGSD--NVSVIDTTSN 282 Query 159 ALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRS 218 + V++++ G T +SPDG +YV S L V+ T Sbjct 283 NITARVNITKPIGIT-----VSPDGKKVYV--TNVSNNLSVIDT---------------- 319 Query 219 RQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVD 272 A V AT+++GS VA++PDG YV + GS+ +V+D Sbjct 320 -------------ANNTVTATVNVGSDPSGVAVTPDGKKVYVVNSGSNNVSVID 360 Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 84/301 (28%), Positives = 139/301 (47%), Gaps = 59/301 (19%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 G+A++ DG + V N G++ +SV+ T T VT T+ + P IA+ + + YV V+ Sbjct 124 GVAVAPDGKKVYVANMGSNNISVIDTATNSVTDTIDAGINPRGIAVS-PDGTKIYV--VN 180 Query 101 SAYDAIAVIDVATNTVL-----GTHPLALSVSDLTLSPDDKYLYVSRN--GTRGADVAVL 153 SA + ++VID TN V G P ++V +PD +YV+ G V+V+ Sbjct 181 SASNNVSVIDTVTNNVTASVTAGGIPYGVAV-----NPDGTKVYVTNGDIGNENNTVSVI 235 Query 154 DTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIG 213 DT + + V P V ++PDG+ +YV AN S + V+ TT Sbjct 236 DTISNNVTATVTAGGIP----YGVAVTPDGTKVYV-ANWGSDNVSVIDTTS--------- 281 Query 214 SRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDV 273 + +R +KP G + +SPDG YV + ++ V Sbjct 282 NNITARVNITKPIG---------------------ITVSPDGKKVYVTNVSNNLS----V 316 Query 274 IDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIRTG 331 IDT + +T A +G + V+V+ D + Y+V+ + V+V+ T ++ VI T+ TG Sbjct 317 IDTANNTVT---ATVNVGSDPSGVAVTPDGKKVYVVNSGSNNVSVIDTASNIVIATVPTG 373 Query 332 Q 332 Sbjct 374 N 374 >gi|49477792|ref|YP_036719.1| hypothetical protein BT9727_2393 [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329348|gb|AAT59994.1| conserved hypothetical protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length=391 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 93/309 (31%), Positives = 148/309 (48%), Gaps = 54/309 (17%) Query 50 LLVVTNNGT------DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAY 103 L+ VTN G DTVSV+ T T V T+T N P + + A RAYV+ + S Sbjct 92 LVYVTNAGAIDDPADDTVSVINTGTNTVAATITVDNAPLEVTVSPNGA-RAYVTNIFS-- 148 Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VID ATNTV+ T P+ + +SP++ +YV + + DV+V++ T +ID Sbjct 149 DTVSVIDTATNTVIATIPVGADPIGVAVSPNNTTVYVGNHASN--DVSVINAATNTVIDT 206 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V AP Q + +SP+G++ YV AN S + V+ T Sbjct 207 IPVGIAP----QGITVSPNGALAYV-ANELSNTISVINT--------------------- 240 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 A V+ATI +G R + + DG AYV + S+ V VI+T T+ + + Sbjct 241 --------ATNTVIATIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNAVIA 289 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESP 340 + +G + ++ + Y+V++ + V+V+ T+ VI TI G P V P Sbjct 290 TI---NVGTEPVGIDITPGGNLIYVVNKVSNNVSVIDVATNAVIDTISVGLSPDQVTIIP 346 Query 341 DGKYLYIAD 349 DG Y+ + Sbjct 347 DGTLAYVTN 355 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 65/246 (27%), Positives = 112/246 (46%), Gaps = 25/246 (10%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN +DTVSV+ T T V T+ +P +A+ N V + Sbjct 132 VTVSPNGARAYVTNIFSDTVSVIDTATNTVIATIPVGADPIGVAV---SPNNTTVYVGNH 188 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 A + ++VI+ ATNTV+ T P+ ++ +T+SP+ YV+ + ++V++T T +I Sbjct 189 ASNDVSVINAATNTVIDTIPVGIAPQGITVSPNGALAYVANELSN--TISVINTATNTVI 246 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + I + Sbjct 247 ATIPVGIRP----RIIVFTLDGTRAYV--TNQNSNTVSVINTATNAVIATINVGTEPVGI 300 Query 222 SSKPRGNQA--------------AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDF 267 P GN A V+ TI +G S V + PDG +AYV + S+ Sbjct 301 DITPGGNLIYVVNKVSNNVSVIDVATNAVIDTISVGLSPDQVTIIPDGTLAYVTNQASNT 360 Query 268 GAVVDV 273 + +D+ Sbjct 361 VSAIDI 366 Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 45/129 (35%), Positives = 65/129 (51%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ EP I + N YV V+ Sbjct 258 IVFTLDGTRAYVTNQNSNTVSVINTATNAVIATINVGTEPVGIDI-TPGGNLIYV--VNK 314 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VIDVATN V+ T + LS +T+ PD YV+ + V+ +D T +I Sbjct 315 VSNNVSVIDVATNAVIDTISVGLSPDQVTIIPDGTLAYVTNQASN--TVSAIDIATNTVI 372 Query 162 DVVDVSQAP 170 V V AP Sbjct 373 TNVPVGIAP 381 >gi|42781416|ref|NP_978663.1| triple helix repeat-containing collagen [Bacillus cereus ATCC 10987] gi|42737338|gb|AAS41271.1| collagen triple helix repeat domain protein [Bacillus cereus ATCC 10987] Length=580 Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 90/309 (30%), Positives = 146/309 (48%), Gaps = 54/309 (17%) Query 50 LLVVTNNG------TDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAY 103 L+ VTN G DTVSV+ T T V T+T N P + + + RAYV+ + S Sbjct 281 LVYVTNAGAIDDLTNDTVSVINTGTNTVVATITVGNAPLEVTV-SPNGTRAYVTNIFS-- 337 Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 + ++VI+ ATNTV+ T P+ + + +SP++ +YV +G V+V++ T ++ Sbjct 338 NTVSVINTATNTVIATIPVGSNPIGVAVSPNNTTVYVGNHGNN--TVSVINAATNTVVAT 395 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V AP Q + +SP+G+ YV AN S + V+ T Sbjct 396 IPVGNAP----QGITVSPNGAFAYV-ANELSNNISVIDT--------------------- 429 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 A V ATI +G R + + DG AYV + S+ V VIDT T+ + + Sbjct 430 --------ATNTVSATIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVIDTTTNSVIN 478 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESP 340 + + +G + ++ D R Y+V++ + V+V+ T+ VI TI P V P Sbjct 479 TIS---VGSEPVGIDITPDGTRIYVVNKVSNNVSVISVATNTVIDTIPVALSPDQVTIIP 535 Query 341 DGKYLYIAD 349 DG Y+ + Sbjct 536 DGTLAYVTN 544 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 75/259 (29%), Positives = 120/259 (47%), Gaps = 43/259 (16%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA + + IPV PI G+A+S + + + V N+G +TVSV+ T V T+ N P Sbjct 345 TATNTVIATIPVGSNPI-GVAVSPNNTTVYVGNHGNNTVSVINAATNTVVATIPVGNAPQ 403 Query 83 AIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSR 142 I + N A+ + + I+VID ATNTV T P+ + + + D YV+ Sbjct 404 GITV---SPNGAFAYVANELSNNISVIDTATNTVSATIPVGIRPRIIVFTLDGTRAYVTN 460 Query 143 NGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVIT 202 + V+V+DTTT ++I+ + V P + ++PDG+ +YV N S + V+ Sbjct 461 QNSN--TVSVIDTTTNSVINTISVGSEP----VGIDITPDGTRIYV-VNKVSNNVSVI-- 511 Query 203 TRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVAS 262 + A V+ TI + S V + PDG +AYV + Sbjct 512 ---------------------------SVATNTVIDTIPVALSPDQVTIIPDGTLAYVTN 544 Query 263 CGSDFGAVVDVIDTRTHQI 281 GS+ V VI+T T+ + Sbjct 545 QGSN---TVSVINTATNTV 560 Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust. Identities = 78/274 (29%), Positives = 137/274 (50%), Gaps = 48/274 (17%) Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VI+ TNTV+ T + + ++T+SP+ YV+ V+V++T T +I Sbjct 296 DTVSVINTGTNTVVATITVGNAPLEVTVSPNGTRAYVTN--IFSNTVSVINTATNTVIAT 353 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V P V +SP+ + +YVG +G + VI Sbjct 354 IPVGSNP----IGVAVSPNNTTVYVGNHG--NNTVSVIN--------------------- 386 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 AA VVATI +G++ + + +SP+GA AYVA ++ + VIDT T+ +++ Sbjct 387 -------AATNTVVATIPVGNAPQGITVSPNGAFAYVA---NELSNNISVIDTATNTVSA 436 Query 284 SRAISEIGGLVTRVSV-SGDADRAYLVSEDR--VTVLCTRTHDVIGTIRTG-QPSCVVES 339 + + G+ R+ V + D RAY+ +++ V+V+ T T+ VI TI G +P + + Sbjct 437 TIPV----GIRPRIIVFTLDGTRAYVTNQNSNTVSVIDTTTNSVINTISVGSEPVGIDIT 492 Query 340 PDGKYLYIAD-YSGTITRTAVASTIVSGTEQLAL 372 PDG +Y+ + S ++ +VA+ V T +AL Sbjct 493 PDGTRIYVVNKVSNNVSVISVATNTVIDTIPVAL 526 Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/129 (39%), Positives = 74/129 (58%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T++ +EP I + + R YV V+ Sbjct 447 IVFTLDGTRAYVTNQNSNTVSVIDTTTNSVINTISVGSEPVGIDI-TPDGTRIYV--VNK 503 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI VATNTV+ T P+ALS +T+ PD YV+ G+ V+V++T T +I Sbjct 504 VSNNVSVISVATNTVIDTIPVALSPDQVTIIPDGTLAYVTNQGSN--TVSVINTATNTVI 561 Query 162 DVVDVSQAP 170 D V V AP Sbjct 562 DTVPVGVAP 570 >gi|24987493|pdb|1L0Q|A Chain A, Tandem Yvtn Beta-Propeller And Pkd Domains From An Archaeal Surface Layer Protein gi|24987494|pdb|1L0Q|B Chain B, Tandem Yvtn Beta-Propeller And Pkd Domains From An Archaeal Surface Layer Protein gi|24987495|pdb|1L0Q|C Chain C, Tandem Yvtn Beta-Propeller And Pkd Domains From An Archaeal Surface Layer Protein gi|24987496|pdb|1L0Q|D Chain D, Tandem Yvtn Beta-Propeller And Pkd Domains From An Archaeal Surface Layer Protein Length=391 Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust. Identities = 83/277 (30%), Positives = 138/277 (50%), Gaps = 44/277 (15%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P G + IS DG+ + V N ++ VS++ T T V TV + + P +A+ + + Sbjct 28 IPVGSNPXGAV-ISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAV-SPDG 85 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 + YV+ +S+ ++VID +NTV GT S L LSPD K LYV+ NG + V+ Sbjct 86 KQVYVTNXASS--TLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK--TVS 141 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V++T T A+I+ V V ++P + + ++PDG+ +YV AN S + V+ T Sbjct 142 VINTVTKAVINTVSVGRSP----KGIAVTPDGTKVYV-ANFDSXSISVIDTVTNS----- 191 Query 212 IGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVV 271 V+ T+ + ++ +A++P+G AYV + F V Sbjct 192 ------------------------VIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-V 226 Query 272 DVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYL 308 IDT T++IT A +G ++V+ D + Y+ Sbjct 227 SXIDTGTNKIT---ARIPVGPDPAGIAVTPDGKKVYV 260 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 77/305 (26%), Positives = 147/305 (49%), Gaps = 50/305 (16%) Query 49 SLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAV 108 + + N+ +D +SV+ + +VT T+ + P A+ + + + YV+ S + +++ Sbjct 2 TFAYIANSESDNISVIDVTSNKVTATIPVGSNPXG-AVISPDGTKVYVANAHS--NDVSI 58 Query 109 IDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQ 168 ID ATN V+ T P S + +SPD K +YV+ + + ++V+DTT+ + V + Sbjct 59 IDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNXAS--STLSVIDTTSNTVAGTVKTGK 116 Query 169 APGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGN 228 +P + +SPDG LYV NG ++ T+A Sbjct 117 SP----LGLALSPDGKKLYVTNNGDKTVSVINTVTKA----------------------- 149 Query 229 QAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAIS 288 V+ T+ +G S + +A++PDG YVA+ S + VIDT T+ + + Sbjct 150 -------VINTVSVGRSPKGIAVTPDGTKVYVANFDS---XSISVIDTVTNSVIDTV--- 196 Query 289 EIGGLVTRVSVSGDADRAYLVSEDR----VTVLCTRTHDVIGTIRTG-QPSCVVESPDGK 343 ++ + ++V+ + +AY+ + D+ V+ + T T+ + I G P+ + +PDGK Sbjct 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSXIDTGTNKITARIPVGPDPAGIAVTPDGK 256 Query 344 YLYIA 348 +Y+A Sbjct 257 KVYVA 261 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 41/118 (35%), Positives = 65/118 (56%), Gaps = 9/118 (7%) Query 235 RVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLV 294 +V ATI +GS+ +SPDG YVA+ S+ V +IDT T+ + A G Sbjct 23 KVTATIPVGSNPXGAVISPDGTKVYVANAHSND---VSIIDTATNNVI---ATVPAGSSP 76 Query 295 TRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIAD 349 V+VS D + Y+ + ++V+ T ++ V GT++TG+ P + SPDGK LY+ + Sbjct 77 QGVAVSPDGKQVYVTNXASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTN 134 Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 33/101 (33%), Positives = 56/101 (56%), Gaps = 1/101 (0%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 GIA++ DG+ + V N + ++SV+ T T V TV P IA+ N E +AYV+ V Sbjct 162 GIAVTPDGTKVYVANFDSXSISVIDTVTNSVIDTVKVEAAPSGIAV-NPEGTKAYVTNVD 220 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVS 141 ++ ++ ID TN + P+ + + ++PD K +YV+ Sbjct 221 KYFNTVSXIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVA 261 >gi|21228830|ref|NP_634752.1| hypothetical protein MM_2728 [Methanosarcina mazei Go1] gi|20907352|gb|AAM32424.1| hypothetical protein MM_2728 [Methanosarcina mazei Go1] Length=448 Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 90/304 (30%), Positives = 147/304 (49%), Gaps = 50/304 (16%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 G+A+S DG + V N+G++TVSV+ T +V TV P I + N + +AYV++ S Sbjct 89 GVAVSPDGKKVYVVNSGSNTVSVIDTSKNKVIDTVKIGTYPQEIVV-NPDGKKAYVTSFS 147 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGAD----VAVLDTT 156 + + ++VID T+ V+ T + S + +SPD K +YV+ +G + V+V+DT Sbjct 148 N--NIVSVIDTETDRVISTVNVGNFPSGVAVSPDGKKVYVANSGGDSTNFTGTVSVIDTA 205 Query 157 TGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANG---PSGGLLVVITTRAQSDGGRIG 213 T A+ + G + V SPDG+ YV + S + VI T Sbjct 206 TNAVTATIHT----GNNSIGVVFSPDGTRAYVMNSNIYRDSTATISVIDTTTN------- 254 Query 214 SRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVA--SCGSD-FGAV 270 V AT+ +GS R VA+SPDG YV+ G+D Sbjct 255 ---------------------EVTATVPVGSYPRGVAVSPDGKKVYVSIQFPGADSLTGA 293 Query 271 VDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTI 328 VD+IDT T+++T++ + + G + V+ D + +V+ D V+V+ T T+ VI + Sbjct 294 VDIIDTTTNEVTATVPVGKAPG---GIEVTPDGTKVLVVNYASDTVSVIDTATNKVIDAM 350 Query 329 RTGQ 332 G+ Sbjct 351 NVGK 354 Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 53/160 (34%), Positives = 84/160 (53%), Gaps = 18/160 (11%) Query 235 RVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLV 294 +V +T+D+G VA+SPDG YV + GS+ V VIDT +++ + +IG Sbjct 76 KVTSTVDVGDHPAGVAVSPDGKKVYVVNSGSN---TVSVIDTSKNKVIDTV---KIGTYP 129 Query 295 TRVSVSGDADRAYL--VSEDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIA--- 348 + V+ D +AY+ S + V+V+ T T VI T+ G PS V SPDGK +Y+A Sbjct 130 QEIVVNPDGKKAYVTSFSNNIVSVIDTETDRVISTVNVGNFPSGVAVSPDGKKVYVANSG 189 Query 349 ----DYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPE 384 +++GT++ A+ V+ T G + FSP+ Sbjct 190 GDSTNFTGTVSVIDTATNAVTATIHTGNNSIGVV--FSPD 227 >gi|254390941|ref|ZP_05006151.1| 40-residue YVTN family beta-propeller repeat-containing protein [Streptomyces clavuligerus ATCC 27064] gi|197704638|gb|EDY50450.1| 40-residue YVTN family beta-propeller repeat-containing protein [Streptomyces clavuligerus ATCC 27064] Length=545 Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 85/252 (34%), Positives = 121/252 (49%), Gaps = 45/252 (17%) Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VID AT TV T P+ L SPD LYVS NG G V+V+DT TG +I Sbjct 135 DTVSVIDTATETVTSTFPVGDGPKGLAASPDGGRLYVS-NGNAGT-VSVVDTATGTVIAT 192 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 V V+ +P + ++PDGS YV +G S L VI T A + Sbjct 193 VPVTGSP----NGIAVTPDGSRAYVVTSGNS--RLTVIDTAANT---------------- 230 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 V TI +GS+ + VA+SPDGA AYV + V V+DT T+ +T Sbjct 231 ------------VTTTIAVGSAPQQVAVSPDGARAYVTNYNDRS---VSVVDTATNTVTG 275 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIR-TGQPSCVVESP 340 + ++ G V+ + D+ RAY+ + V + T T+ V I T +P V SP Sbjct 276 T---IDVRGFPQGVAFTPDSGRAYVTRPYSNSVVAINTATNAVSANIPLTDRPYGVTASP 332 Query 341 DGKYLYIADYSG 352 DG +Y++ + G Sbjct 333 DGTRVYVSRHWG 344 Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 87/261 (34%), Positives = 115/261 (45%), Gaps = 29/261 (11%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 PV GP G+A S DG L V+N TVSVV T T V TV P IA+ + Sbjct 151 FPVGDGP-KGLAASPDGGRLYVSNGNAGTVSVVDTATGTVIATVPVTGSPNGIAV-TPDG 208 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 +RAYV V+S + VID A NTV T + + + +SPD YV+ R V+ Sbjct 209 SRAYV--VTSGNSRLTVIDTAANTVTTTIAVGSAPQQVAVSPDGARAYVTNYNDR--SVS 264 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V+DT T + +DV P Q V +PD YV P +V I T + Sbjct 265 VVDTATNTVTGTIDVRGFP----QGVAFTPDSGRAYV--TRPYSNSVVAINTATNAVSAN 318 Query 212 IGSRSRSRQKSSKPRGNQ--------------AAAGLRVVATIDIGSSVRDVALSPDGAI 257 I R ++ P G + A A V AT G++ +VA++PDG Sbjct 319 IPLTDRPYGVTASPDGTRVYVSRHWGATVATIATATNTVSATALAGNTPGEVAVTPDGGH 378 Query 258 AYVASCGSDFGAVVDVIDTRT 278 Y + S A V VIDT T Sbjct 379 VYATNGNS---ATVSVIDTAT 396 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 52/166 (32%), Positives = 86/166 (52%), Gaps = 10/166 (6%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA G+ + +PV G P GIA++ DGS V +G ++V+ T VT T+ + P Sbjct 184 TATGTVIATVPVTGSP-NGIAVTPDGSRAYVVTSGNSRLTVIDTAANTVTTTIAVGSAPQ 242 Query 83 AIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSR 142 +A+ + + RAYV+ + +++V+D ATNTV GT + + +PD YV+R Sbjct 243 QVAV-SPDGARAYVTNYND--RSVSVVDTATNTVTGTIDVRGFPQGVAFTPDSGRAYVTR 299 Query 143 NGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYV 188 + V ++T T A+ + ++ P V SPDG+ +YV Sbjct 300 PYSN--SVVAINTATNAVSANIPLTDRP----YGVTASPDGTRVYV 339 Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 46/136 (34%), Positives = 70/136 (52%), Gaps = 9/136 (6%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112 V N DTVSV+ T T VT T + P +A + + R YVS ++ ++V+D A Sbjct 129 VANYSDDTVSVIDTATETVTSTFPVGDGPKGLA-ASPDGGRLYVSNGNAG--TVSVVDTA 185 Query 113 TNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGT 172 T TV+ T P+ S + + ++PD YV +G + + V+DT + + V AP Sbjct 186 TGTVIATVPVTGSPNGIAVTPDGSRAYVVTSG--NSRLTVIDTAANTVTTTIAVGSAP-- 241 Query 173 TTQCVRMSPDGSVLYV 188 Q V +SPDG+ YV Sbjct 242 --QQVAVSPDGARAYV 255 >gi|228985412|ref|ZP_04145571.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774365|gb|EEM22772.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length=527 Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 90/311 (29%), Positives = 146/311 (47%), Gaps = 54/311 (17%) Query 50 LLVVTNNGT------DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAY 103 L+ VTN G DTVSV+ T T V T+T N P + + + RAYV+ + S Sbjct 228 LVYVTNAGVIDDPTDDTVSVINTGTNTVVATITVDNAPLEVTV-SPNGTRAYVTNIFS-- 284 Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VID +TN+V+ T P+ + +SP++ +YV +G V+V++ T +ID Sbjct 285 DTVSVIDTSTNSVIATIPVGSDPIGVAVSPNNTTVYVGNHGNN--TVSVINAATNTVIDT 342 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 + V AP Q + +SP+G+ YV AN S + V+ T Sbjct 343 IPVGNAP----QGITVSPNGAFAYV-ANELSNNISVINT--------------------- 376 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 A V ATI +G R + + DG AYV + S+ V VI+T T+ + + Sbjct 377 --------ATNTVSATIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNAVIN 425 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESP 340 + +G + ++ + Y+V++ + V+V+ T+ VI TI G P V P Sbjct 426 TI---NVGTEPVGIDITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIP 482 Query 341 DGKYLYIADYS 351 DG Y+ + + Sbjct 483 DGTLAYVTNQA 493 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 64/246 (27%), Positives = 113/246 (46%), Gaps = 25/246 (10%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN +DTVSV+ T T V T+ ++P +A+ N V + Sbjct 268 VTVSPNGTRAYVTNIFSDTVSVIDTSTNSVIATIPVGSDPIGVAV---SPNNTTVYVGNH 324 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+ ATNTV+ T P+ + +T+SP+ + YV+ + +++V++T T + Sbjct 325 GNNTVSVINAATNTVIDTIPVGNAPQGITVSPNGAFAYVANELSN--NISVINTATNTVS 382 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + I + Sbjct 383 ATIPVGIRP----RIIVFTLDGTRAYVTNQ--NSNTVSVINTATNAVINTINVGTEPVGI 436 Query 222 SSKPRGNQ--------------AAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDF 267 P GN A V+ TI +G S V + PDG +AYV + S+ Sbjct 437 DITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTLAYVTNQASNT 496 Query 268 GAVVDV 273 +V+D+ Sbjct 497 VSVIDI 502 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 46/129 (36%), Positives = 67/129 (52%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ EP I + N YV V+ Sbjct 394 IVFTLDGTRAYVTNQNSNTVSVINTATNAVINTINVGTEPVGIDI-TPGGNLIYV--VNK 450 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+VATNTV+ T + LS +T+ PD YV+ + V+V+D T +I Sbjct 451 VSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTLAYVTNQASN--TVSVIDIATNTVI 508 Query 162 DVVDVSQAP 170 V V AP Sbjct 509 TNVPVGVAP 517 >gi|134099853|ref|YP_001105514.1| putative surface layer protein [Saccharopolyspora erythraea NRRL 2338] gi|291006111|ref|ZP_06564084.1| putative surface layer protein [Saccharopolyspora erythraea NRRL 2338] gi|133912476|emb|CAM02589.1| putative surface layer protein [Saccharopolyspora erythraea NRRL 2338] Length=793 Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 89/297 (30%), Positives = 140/297 (48%), Gaps = 33/297 (11%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTV- 99 G+A++ DG VT+ T VSV+ RV +V P +A+ + RAYVS Sbjct 510 GVAVTPDGRYAFVTSRNTSRVSVIDVAGGRVVASVFLKVPPQFVAVA-PDGRRAYVSAYP 568 Query 100 -SSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTG 158 + + +AVIDVA+ TV+ P+ L++SPD + +YV + + A+++V+ T T Sbjct 569 PTGPENEVAVIDVASATVIAEVPVGKHPYTLSVSPDGRQVYVPDHDS--AEISVMSTDTN 626 Query 159 ALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRS 218 ++ V+ V + P V SPDG YV + L+ V+ T +S G I Sbjct 627 SVEGVIRVPRNP----HSVSFSPDGQTAYVANH--ESNLVSVVDTATRSVTGSIPVPPSP 680 Query 219 RQKSSKPRGNQA--------------AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCG 264 + P G + +VVAT +G+ VA++PDG AYV + G Sbjct 681 HSTTITPDGTEVLVASYDAGTVSTIDTGSKKVVATTRVGAKPSSVAIAPDGRHAYVVNEG 740 Query 265 SDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYL--VSEDRVTVLCT 319 S+ V VI T Q+T A +G +V+ D +AY+ V+ + V+VL T Sbjct 741 SNS---VSVIATGNDQVT---ATVPVGRAPVVAAVTPDGRQAYVTNVNSNSVSVLNT 791 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 69/241 (29%), Positives = 111/241 (47%), Gaps = 33/241 (13%) Query 129 LTLSPDDKYLYV-SRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLY 187 + ++PD +Y +V SRN +R V+V+D G ++ V + P Q V ++PDG Y Sbjct 511 VAVTPDGRYAFVTSRNTSR---VSVIDVAGGRVVASVFLKVPP----QFVAVAPDGRRAY 563 Query 188 VGANGPSG--GLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQA------AAGLRVVAT 239 V A P+G + VI + + + S P G Q +A + V++T Sbjct 564 VSAYPPTGPENEVAVIDVASATVIAEVPVGKHPYTLSVSPDGRQVYVPDHDSAEISVMST 623 Query 240 --------IDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIG 291 I + + V+ SPDG AYVA+ S+ V V+DT T +T S + Sbjct 624 DTNSVEGVIRVPRNPHSVSFSPDGQTAYVANHESNL---VSVVDTATRSVTGSIPVPPSP 680 Query 292 GLVTRVSVSGDADRAYLVSEDRVTV--LCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIA 348 T ++ D + S D TV + T + V+ T R G +PS V +PDG++ Y+ Sbjct 681 HSTT---ITPDGTEVLVASYDAGTVSTIDTGSKKVVATTRVGAKPSSVAIAPDGRHAYVV 737 Query 349 D 349 + Sbjct 738 N 738 Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/132 (33%), Positives = 69/132 (53%), Gaps = 17/132 (12%) Query 232 AGLRVVATIDIGSSVRDVALSPDGAIAYVASCG----SDFGAVVDVIDTRTHQITSSRAI 287 AG RVVA++ + + VA++PDG AYV++ + AV+DV S+ I Sbjct 536 AGGRVVASVFLKVPPQFVAVAPDGRRAYVSAYPPTGPENEVAVIDV--------ASATVI 587 Query 288 SEI--GGLVTRVSVSGDADRAYLVSED--RVTVLCTRTHDVIGTIRTGQ-PSCVVESPDG 342 +E+ G +SVS D + Y+ D ++V+ T T+ V G IR + P V SPDG Sbjct 588 AEVPVGKHPYTLSVSPDGRQVYVPDHDSAEISVMSTDTNSVEGVIRVPRNPHSVSFSPDG 647 Query 343 KYLYIADYSGTI 354 + Y+A++ + Sbjct 648 QTAYVANHESNL 659 Score = 41.2 bits (95), Expect = 0.28, Method: Compositional matrix adjust. Identities = 44/155 (29%), Positives = 74/155 (48%), Gaps = 17/155 (10%) Query 241 DIG-SSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSV 299 DIG ++ R VA++PDG A+V S + +V+DV R + + V+V Sbjct 502 DIGVAAPRGVAVTPDGRYAFVTSRNTSRVSVIDVAGGRVVASVFLKVPPQF------VAV 555 Query 300 SGDADRAYLVS------EDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYIADY-S 351 + D RAY+ + E+ V V+ + VI + G+ P + SPDG+ +Y+ D+ S Sbjct 556 APDGRRAYVSAYPPTGPENEVAVIDVASATVIAEVPVGKHPYTLSVSPDGRQVYVPDHDS 615 Query 352 GTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQ 386 I+ + + V G + + R FSP+ Q Sbjct 616 AEISVMSTDTNSVEGV--IRVPRNPHSVSFSPDGQ 648 >gi|294816555|ref|ZP_06775197.1| 40-residue YVTN family beta-propeller repeat protein [Streptomyces clavuligerus ATCC 27064] gi|326445476|ref|ZP_08220210.1| 40-residue YVTN family beta-propeller repeat-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294321370|gb|EFG03505.1| 40-residue YVTN family beta-propeller repeat protein [Streptomyces clavuligerus ATCC 27064] Length=474 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 85/252 (34%), Positives = 121/252 (49%), Gaps = 45/252 (17%) Query 104 DAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDV 163 D ++VID AT TV T P+ L SPD LYVS NG G V+V+DT TG +I Sbjct 64 DTVSVIDTATETVTSTFPVGDGPKGLAASPDGGRLYVS-NGNAGT-VSVVDTATGTVIAT 121 Query 164 VDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSS 223 V V+ +P + ++PDGS YV +G S L VI T A + Sbjct 122 VPVTGSP----NGIAVTPDGSRAYVVTSGNS--RLTVIDTAANT---------------- 159 Query 224 KPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITS 283 V TI +GS+ + VA+SPDGA AYV + V V+DT T+ +T Sbjct 160 ------------VTTTIAVGSAPQQVAVSPDGARAYVTNYNDRS---VSVVDTATNTVTG 204 Query 284 SRAISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIR-TGQPSCVVESP 340 + ++ G V+ + D+ RAY+ + V + T T+ V I T +P V SP Sbjct 205 TI---DVRGFPQGVAFTPDSGRAYVTRPYSNSVVAINTATNAVSANIPLTDRPYGVTASP 261 Query 341 DGKYLYIADYSG 352 DG +Y++ + G Sbjct 262 DGTRVYVSRHWG 273 Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 87/261 (34%), Positives = 115/261 (45%), Gaps = 29/261 (11%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 PV GP G+A S DG L V+N TVSVV T T V TV P IA+ + Sbjct 80 FPVGDGP-KGLAASPDGGRLYVSNGNAGTVSVVDTATGTVIATVPVTGSPNGIAV-TPDG 137 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVA 151 +RAYV V+S + VID A NTV T + + + +SPD YV+ R V+ Sbjct 138 SRAYV--VTSGNSRLTVIDTAANTVTTTIAVGSAPQQVAVSPDGARAYVTNYNDR--SVS 193 Query 152 VLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGR 211 V+DT T + +DV P Q V +PD YV P +V I T + Sbjct 194 VVDTATNTVTGTIDVRGFP----QGVAFTPDSGRAYV--TRPYSNSVVAINTATNAVSAN 247 Query 212 IGSRSRSRQKSSKPRGNQ--------------AAAGLRVVATIDIGSSVRDVALSPDGAI 257 I R ++ P G + A A V AT G++ +VA++PDG Sbjct 248 IPLTDRPYGVTASPDGTRVYVSRHWGATVATIATATNTVSATALAGNTPGEVAVTPDGGH 307 Query 258 AYVASCGSDFGAVVDVIDTRT 278 Y + S A V VIDT T Sbjct 308 VYATNGNS---ATVSVIDTAT 325 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 55/183 (31%), Positives = 89/183 (49%), Gaps = 10/183 (5%) Query 6 GREVARESRDAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVG 65 GR V TA G+ + +PV G P GIA++ DGS V +G ++V+ Sbjct 96 GRLYVSNGNAGTVSVVDTATGTVIATVPVTGSP-NGIAVTPDGSRAYVVTSGNSRLTVID 154 Query 66 TDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALS 125 T VT T+ + P +A+ + + RAYV+ + +++V+D ATNTV GT + Sbjct 155 TAANTVTTTIAVGSAPQQVAV-SPDGARAYVTNYND--RSVSVVDTATNTVTGTIDVRGF 211 Query 126 VSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSV 185 + +PD YV+R + V ++T T A+ + ++ P V SPDG+ Sbjct 212 PQGVAFTPDSGRAYVTRPYSN--SVVAINTATNAVSANIPLTDRP----YGVTASPDGTR 265 Query 186 LYV 188 +YV Sbjct 266 VYV 268 Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 46/136 (34%), Positives = 70/136 (52%), Gaps = 9/136 (6%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112 V N DTVSV+ T T VT T + P +A + + R YVS ++ ++V+D A Sbjct 58 VANYSDDTVSVIDTATETVTSTFPVGDGPKGLA-ASPDGGRLYVSNGNAG--TVSVVDTA 114 Query 113 TNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGT 172 T TV+ T P+ S + + ++PD YV +G + + V+DT + + V AP Sbjct 115 TGTVIATVPVTGSPNGIAVTPDGSRAYVVTSG--NSRLTVIDTAANTVTTTIAVGSAP-- 170 Query 173 TTQCVRMSPDGSVLYV 188 Q V +SPDG+ YV Sbjct 171 --QQVAVSPDGARAYV 184 >gi|258590983|emb|CBE67278.1| conserved hypothetical protein; putative quinoprotein amine dehydrogenase, beta chain-like [NC10 bacterium 'Dutch sediment'] Length=325 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 83/299 (28%), Positives = 147/299 (50%), Gaps = 50/299 (16%) Query 94 AYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVL 153 AYV+ S D ++VID +TNTV+ T + + +SPD +++Y++ NG D++++ Sbjct 34 AYVANEKS--DDVSVIDTSTNTVIRTIAVGKRPRGVAISPDRRHVYIA-NGNSD-DISII 89 Query 154 DTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIG 213 D G +++ + G + V +SPDG+ LY A +GG + VI T+ + Sbjct 90 DAEVGKVVE----TWPAGVDPEGVALSPDGTRLY--AVNENGGTVTVINTKTGT------ 137 Query 214 SRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDV 273 V+ATI++ +A+SPDG +AYV++ S+ + V Sbjct 138 ----------------------VIATIEVQVEPESIAVSPDGQVAYVSNETSN---TISV 172 Query 274 IDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVSED----RVTVLCTRTHDVIGTIR 329 IDT T ++ ++ +++ ++ S D AY+ SE ++V+ H VI +I Sbjct 173 IDTATLKVLTAIPVAKNP---RGIAFSPDGKYAYVTSEQVEPGVLSVIEVARHKVIKSIP 229 Query 330 TGQ-PSCVVESPDGKYLYIADYSGTITRTAVASTIVSGTEQLALQRRGSMQWFSPELQQ 387 G+ P VV S DG+ LY+A A T+ + T+Q+ + +R F+P+ Q+ Sbjct 230 VGERPVGVVVSRDGRTLYVAHGRSNAVYVVDARTL-TVTKQIPVGQRAWYLAFTPDEQR 287 Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 72/233 (31%), Positives = 104/233 (45%), Gaps = 37/233 (15%) Query 41 GIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVS 100 G+A+S DG+ L N TV+V+ T T V T+ EP +IA+ + + AYVS + Sbjct 108 GVALSPDGTRLYAVNENGGTVTVINTKTGTVIATIEVQVEPESIAV-SPDGQVAYVSNET 166 Query 101 SAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGAL 160 S + I+VID AT VL P+A + + SPD KY YV+ ++V++ + Sbjct 167 S--NTISVIDTATLKVLTAIPVAKNPRGIAFSPDGKYAYVTSEQVEPGVLSVIEVARHKV 224 Query 161 IDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQ 220 I + V + P V +S DG LYV A+G S + VV Sbjct 225 IKSIPVGERP----VGVVVSRDGRTLYV-AHGRSNAVYVV-------------------- 259 Query 221 KSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDV 273 A L V I +G +A +PD YVA SD +V+DV Sbjct 260 ---------DARTLTVTKQIPVGQRAWYLAFTPDEQRLYVACGRSDAVSVIDV 303 Score = 40.8 bits (94), Expect = 0.43, Method: Compositional matrix adjust. Identities = 33/91 (37%), Positives = 48/91 (53%), Gaps = 4/91 (4%) Query 32 IPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEA 91 IPV P+G + +SRDG L V + ++ V VV T VT+ + + +A E Sbjct 228 IPVGERPVG-VVVSRDGRTLYVAHGRSNAVYVVDARTLTVTKQIPVGQRAWYLAFTPDE- 285 Query 92 NRAYVSTVSSAYDAIAVIDVATNTVLGTHPL 122 R YV+ S DA++VIDVA V+ T P+ Sbjct 286 QRLYVACGRS--DAVSVIDVAAGKVIATVPV 314 >gi|296268098|ref|YP_003650730.1| 40-residue YVTN family beta-propeller repeat-containing protein [Thermobispora bispora DSM 43833] gi|296090885|gb|ADG86837.1| 40-residue YVTN family beta-propeller repeat protein [Thermobispora bispora DSM 43833] Length=354 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 97/328 (30%), Positives = 154/328 (47%), Gaps = 48/328 (14%) Query 7 REVARESR--DAQVFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVV 64 R+VA + D V A + + IPV P+G +A S G+ + VTNNG++TVSV+ Sbjct 62 RQVAYVTNLNDDTVSVIDVASNTTIATIPVGNAPLG-VAASPGGTRVYVTNNGSNTVSVI 120 Query 65 GTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLAL 124 T T V + P+ +A+ + RAYV+ + ++VID ATN V+ T P+ Sbjct 121 DTATNGVIAVIPVGALPYDVAV-SPGGTRAYVT--NQGAGTVSVIDTATNIVIATIPVGN 177 Query 125 SVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGS 184 + ++P YV+ G+ V+V+DT T +I + V P V ++P Sbjct 178 EPQGVAITPGGTRAYVANTGSN--TVSVIDTATNTVIATIPVGAQP----FGVAVTP--- 228 Query 185 VLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGS 244 GG V++T RA S I + + + V+ATI +G+ Sbjct 229 ----------GGTRVLVTNRANSTVSVIDTATNT-----------------VIATIPVGA 261 Query 245 SVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDAD 304 VA++P G AYVA+ G++ +V+DV R IT+ +G V+V+ Sbjct 262 QPFGVAVTPGGTRAYVANTGANNVSVIDV--ARNSVITT----VPVGTQPLGVAVTLGGT 315 Query 305 RAYLVSEDRVTVLCTRTHDVIGTIRTGQ 332 RAY V+ V+V+ T T+ V T+ G Sbjct 316 RAYAVNLTTVSVINTATNTVEATLGVGN 343 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 86/288 (30%), Positives = 135/288 (47%), Gaps = 53/288 (18%) Query 94 AYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVL 153 AYV+ ++ D ++VIDVA+NT + T P+ + + SP +YV+ NG+ V+V+ Sbjct 65 AYVTNLND--DTVSVIDVASNTTIATIPVGNAPLGVAASPGGTRVYVTNNGSN--TVSVI 120 Query 154 DTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIG 213 DT T +I V+ V P V +SP G+ YV G G + VI T Sbjct 121 DTATNGVIAVIPVGALP----YDVAVSPGGTRAYVTNQG--AGTVSVIDTATN------- 167 Query 214 SRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDV 273 V+ATI +G+ + VA++P G AYVA+ GS+ V V Sbjct 168 ---------------------IVIATIPVGNEPQGVAITPGGTRAYVANTGSN---TVSV 203 Query 274 IDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLV--SEDRVTVLCTRTHDVIGTIRTG 331 IDT T+ + ++ +G V+V+ R + + V+V+ T T+ VI TI G Sbjct 204 IDTATNTVIATI---PVGAQPFGVAVTPGGTRVLVTNRANSTVSVIDTATNTVIATIPVG 260 Query 332 -QPSCVVESPDGKYLYIADYSGT------ITRTAVASTIVSGTEQLAL 372 QP V +P G Y+A+ + R +V +T+ GT+ L + Sbjct 261 AQPFGVAVTPGGTRAYVANTGANNVSVIDVARNSVITTVPVGTQPLGV 308 >gi|229051556|ref|ZP_04195033.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus AH676] gi|228721798|gb|EEL73265.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus AH676] Length=407 Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 90/296 (31%), Positives = 141/296 (48%), Gaps = 52/296 (17%) Query 59 DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLG 118 DTVSV+ T T V T+T N P + + A RAYV+ + S D ++VID A+NTV+ Sbjct 123 DTVSVINTGTNIVVDTITVGNAPLEVTVSPNGA-RAYVTNIFS--DTVSVIDTASNTVIA 179 Query 119 THPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVR 178 T P+ + +SPD+ +YV +G V+V++ T A+I + V AP Q + Sbjct 180 TIPVGTDPIGVAVSPDNTTVYVGNHGNN--TVSVINAATNAVIATIPVGLAP----QGIT 233 Query 179 MSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVA 238 +SP+G+ YV AN S + V+ T A V+A Sbjct 234 VSPNGTFAYV-ANELSNTISVINT-----------------------------ATNAVIA 263 Query 239 TIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQI--TSSRAISEIGGLVTR 296 TI +G R + + DG AYV + S+ V VI+T T+ + T + I +G Sbjct 264 TIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNAVINTINVGIEPVG----- 315 Query 297 VSVSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIAD 349 + ++ + Y+V++ + V+V+ T+ VI TI G P V PDG Y+ + Sbjct 316 IDITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTN 371 Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 48/166 (29%), Positives = 84/166 (51%), Gaps = 10/166 (6%) Query 23 TAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPF 82 TA + + IPV PIG +A+S D + + V N+G +TVSV+ T V T+ P Sbjct 172 TASNTVIATIPVGTDPIG-VAVSPDNTTVYVGNHGNNTVSVINAATNAVIATIPVGLAPQ 230 Query 83 AIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSR 142 I + N + + + I+VI+ ATN V+ T P+ + + + D YV+ Sbjct 231 GITV---SPNGTFAYVANELSNTISVINTATNAVIATIPVGIRPRIIVFTLDGTRAYVTN 287 Query 143 NGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGSVLYV 188 + V+V++T T A+I+ ++V P + ++P G+++YV Sbjct 288 QNSN--TVSVINTATNAVINTINVGIEP----VGIDITPGGNLIYV 327 Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 63/239 (27%), Positives = 108/239 (46%), Gaps = 25/239 (10%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN +DTVSV+ T + V T+ +P +A+ + + YV + Sbjct 148 VTVSPNGARAYVTNIFSDTVSVIDTASNTVIATIPVGTDPIGVAV-SPDNTTVYVG--NH 204 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+ ATN V+ T P+ L+ +T+SP+ + YV+ + ++V++T T A+I Sbjct 205 GNNTVSVINAATNAVIATIPVGLAPQGITVSPNGTFAYVANELSN--TISVINTATNAVI 262 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + I Sbjct 263 ATIPVGIRP----RIIVFTLDGTRAYVTNQ--NSNTVSVINTATNAVINTINVGIEPVGI 316 Query 222 SSKPRGNQA--------------AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSD 266 P GN A V+ TI +G S V + PDG AYV + S+ Sbjct 317 DITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQASN 375 >gi|282163597|ref|YP_003355982.1| putative cell surface protein [Methanocella paludicola SANAE] gi|282155911|dbj|BAI60999.1| putative cell surface protein [Methanocella paludicola SANAE] Length=352 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 92/316 (30%), Positives = 151/316 (48%), Gaps = 54/316 (17%) Query 31 KIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAE 90 IPV PIG IAI+ +G+ V N G+ TVSV+ T T V ++ PF +A+ Sbjct 82 PIPVGNYPIG-IAITPNGARAYVANYGSGTVSVIDTSTNTVIGSIPVGRGPFGVAI-TPN 139 Query 91 ANRAYVSTVSSAYDAIAVIDVATNTVLGTH-PLALSVSDLTLSPDDKYLYVSRNGTRGAD 149 RAYV+ +S + ++VID +TNTV+G+ P+ + + +P+ YV+ + Sbjct 140 GTRAYVT--NSIDNTVSVIDTSTNTVIGSPIPVGNAPVSIAFTPNGTRAYVTNFNSN--T 195 Query 150 VAVLDTTTGALI-DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSD 208 V+V+DT+T +I + V P Q + ++PDG+ YV N SG + V+ Sbjct 196 VSVIDTSTNTVIGSPIPVGNGP----QNIAITPDGTRAYV-TNFNSGTVSVI-------- 242 Query 209 GGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFG 268 A + + I +G + ++PDG AYV + SD Sbjct 243 --------------------DTATNTVIGSPIPVGKGPYGIKITPDGTRAYVTNFNSD-- 280 Query 269 AVVDVIDTRTHQITSSRAISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIG 326 V VIDT T+ + + +G T ++++ D RAY+ + ++ V+V+ T T+ VI Sbjct 281 -TVSVIDTSTNTVIGTI---PVGNGPTGIAITTDGTRAYVTNSIDNTVSVIDTTTNTVI- 335 Query 327 TIRTGQPSCVVESPDG 342 G P V + P+G Sbjct 336 ----GSPITVGDYPEG 347 Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 99/335 (30%), Positives = 155/335 (47%), Gaps = 57/335 (17%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSV-NEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDV 111 VTN ++TVSV+ T T V + V N P IA+ RAYV+ S ++VID Sbjct 60 VTNFNSNTVSVIDTSTNTVIGSPIPVGNYPIGIAI-TPNGARAYVANYGSG--TVSVIDT 116 Query 112 ATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI-DVVDVSQAP 170 +TNTV+G+ P+ + ++P+ YV+ + V+V+DT+T +I + V AP Sbjct 117 STNTVIGSIPVGRGPFGVAITPNGTRAYVTN--SIDNTVSVIDTSTNTVIGSPIPVGNAP 174 Query 171 GTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQA 230 + +P+G+ YV N S + V+ T S IGS Sbjct 175 ----VSIAFTPNGTRAYV-TNFNSNTVSVIDT----STNTVIGSP--------------- 210 Query 231 AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEI 290 I +G+ +++A++PDG AYV + S V VIDT T+ + S + Sbjct 211 ---------IPVGNGPQNIAITPDGTRAYVTNFNS---GTVSVIDTATNTVIGSPI--PV 256 Query 291 GGLVTRVSVSGDADRAYL--VSEDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGKYLYI 347 G + ++ D RAY+ + D V+V+ T T+ VIGTI G P+ + + DG Y+ Sbjct 257 GKGPYGIKITPDGTRAYVTNFNSDTVSVIDTSTNTVIGTIPVGNGPTGIAITTDGTRAYV 316 Query 348 AD-------YSGTITRTAVASTIVSG--TEQLALQ 373 + T T T + S I G E +A+Q Sbjct 317 TNSIDNTVSVIDTTTNTVIGSPITVGDYPEGIAIQ 351 >gi|296268105|ref|YP_003650737.1| 40-residue YVTN family beta-propeller repeat-containing protein [Thermobispora bispora DSM 43833] gi|296090892|gb|ADG86844.1| 40-residue YVTN family beta-propeller repeat protein [Thermobispora bispora DSM 43833] Length=354 Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 99/331 (30%), Positives = 156/331 (48%), Gaps = 54/331 (16%) Query 7 REVARESRDAQ--VFEFGTAPGSAVVKIPVQGGPIGGIAISRDGSLLVVTNNGTDTVSVV 64 R+VA + +A V A + + IPV P G+A S G+ + V NN +TVSV+ Sbjct 60 RQVAYVTNNADNTVSAIDVASNTTIATIPVGAAP-DGVAASPGGTRVFVANNADNTVSVI 118 Query 65 GTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLGTHPLAL 124 T T V + P +A+ RAYV+ +S ++VID ATN V+ T P+ Sbjct 119 NTATNGVIAIIPVGAGPTGVAV-TPGGTRAYVA--NSGAGTVSVIDTATNGVIATIPVGT 175 Query 125 SVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVRMSPDGS 184 + +D+ ++PD YV+ NG+ V+V++T T +I + V AP V +SP G+ Sbjct 176 APTDVAVTPDGTRAYVTNNGSN--TVSVINTATNTVIATIPVGVAP----TGVGVSPGGT 229 Query 185 VLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVATIDIGS 244 + V + G + VI T + V+ATI +G+ Sbjct 230 RVLV--TNETDGTVSVINTATNT----------------------------VIATIPVGT 259 Query 245 SVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAI--SEIGGLVTRVSVSGD 302 + DVA SP+GA AYV + G V VI+T + ++ + + IG V+VS Sbjct 260 TPSDVAFSPNGARAYVTNSGD---GTVSVINTAGASLITTVTVGTTPIG-----VAVSLG 311 Query 303 ADRAYLVS--EDRVTVLCTRTHDVIGTIRTG 331 RAY+ + + V+V+ T T+ V T+ G Sbjct 312 GTRAYVANSGDGTVSVIDTATNTVEATLTVG 342 >gi|229178923|ref|ZP_04306282.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus 172560W] gi|228604576|gb|EEK62038.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus 172560W] Length=537 Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 86/296 (30%), Positives = 142/296 (48%), Gaps = 48/296 (16%) Query 59 DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLG 118 DTVSV+ T T V T+T N P + + A RAYV+ + S + ++VID ATNTV+ Sbjct 253 DTVSVINTGTNIVVDTITVGNAPLEVTVSPNGA-RAYVTNIFS--NTVSVIDTATNTVIA 309 Query 119 THPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVR 178 T P+ + + +SP++ +YV +G V+V++ T +I+ + V AP Q + Sbjct 310 TIPVGTNPIGVAVSPNNTTVYVGNHGNN--TVSVINAATNTVINTIPVGIAP----QGIT 363 Query 179 MSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVA 238 +SP+G+ YV AN S + V+ T A V+A Sbjct 364 VSPNGAFAYV-ANELSNTISVINT-----------------------------ATNTVIA 393 Query 239 TIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVS 298 TI +G R + + DG AYV + S+ V VI+T T+ + ++ +G + Sbjct 394 TIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNAVINTI---NVGTEPVGID 447 Query 299 VSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIADYS 351 ++ + Y+V++ + V+V+ T+ VI TI G P V PDG Y+ + + Sbjct 448 ITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQA 503 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 46/129 (36%), Positives = 67/129 (52%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ EP I + N YV V+ Sbjct 404 IVFTLDGTRAYVTNQNSNTVSVINTATNAVINTINVGTEPVGIDI-TPGGNLIYV--VNK 460 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+VATNTV+ T + LS +T+ PD YV+ + V+V+D T +I Sbjct 461 VSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQASN--TVSVIDIATNTVI 518 Query 162 DVVDVSQAP 170 V V AP Sbjct 519 TNVPVGVAP 527 Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/246 (27%), Positives = 111/246 (46%), Gaps = 25/246 (10%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN ++TVSV+ T T V T+ P +A+ N V + Sbjct 278 VTVSPNGARAYVTNIFSNTVSVIDTATNTVIATIPVGTNPIGVAV---SPNNTTVYVGNH 334 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+ ATNTV+ T P+ ++ +T+SP+ + YV+ + ++V++T T +I Sbjct 335 GNNTVSVINAATNTVINTIPVGIAPQGITVSPNGAFAYVANELSN--TISVINTATNTVI 392 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + I + Sbjct 393 ATIPVGIRP----RIIVFTLDGTRAYVTNQ--NSNTVSVINTATNAVINTINVGTEPVGI 446 Query 222 SSKPRGNQ--------------AAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDF 267 P GN A V+ TI +G S V + PDG AYV + S+ Sbjct 447 DITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQASNT 506 Query 268 GAVVDV 273 +V+D+ Sbjct 507 VSVIDI 512 >gi|229070103|ref|ZP_04203370.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus F65185] gi|228713017|gb|EEL64925.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus cereus F65185] Length=480 Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 86/294 (30%), Positives = 141/294 (48%), Gaps = 48/294 (16%) Query 59 DTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVATNTVLG 118 DTVSV+ T T V T+T N P + + A RAYV+ + S + ++VID ATNTV+ Sbjct 196 DTVSVINTGTNIVVDTITVGNAPLEVTVSPNGA-RAYVTNIFS--NTVSVIDTATNTVIA 252 Query 119 THPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVSQAPGTTTQCVR 178 T P+ + + +SP++ +YV +G V+V++ T +I+ + V AP Q + Sbjct 253 TIPVGTNPIGVAVSPNNTTVYVGNHGNN--TVSVINAATNTVINTIPVGIAP----QGIT 306 Query 179 MSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPRGNQAAAGLRVVA 238 +SP+G+ YV AN S + V+ T A V+A Sbjct 307 VSPNGAFAYV-ANELSNTISVINT-----------------------------ATNTVIA 336 Query 239 TIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRAISEIGGLVTRVS 298 TI +G R + + DG AYV + S+ V VI+T T+ + ++ +G + Sbjct 337 TIPVGIRPRIIVFTLDGTRAYVTNQNSN---TVSVINTATNAVINTI---NVGTEPVGID 390 Query 299 VSGDADRAYLVSE--DRVTVLCTRTHDVIGTIRTG-QPSCVVESPDGKYLYIAD 349 ++ + Y+V++ + V+V+ T+ VI TI G P V PDG Y+ + Sbjct 391 ITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTN 444 Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 64/246 (27%), Positives = 111/246 (46%), Gaps = 25/246 (10%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 + +S +G+ VTN ++TVSV+ T T V T+ P +A+ N V + Sbjct 221 VTVSPNGARAYVTNIFSNTVSVIDTATNTVIATIPVGTNPIGVAV---SPNNTTVYVGNH 277 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+ ATNTV+ T P+ ++ +T+SP+ + YV+ + ++V++T T +I Sbjct 278 GNNTVSVINAATNTVINTIPVGIAPQGITVSPNGAFAYVANELSN--TISVINTATNTVI 335 Query 162 DVVDVSQAPGTTTQCVRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQK 221 + V P + + + DG+ YV + + VI T + I + Sbjct 336 ATIPVGIRP----RIIVFTLDGTRAYV--TNQNSNTVSVINTATNAVINTINVGTEPVGI 389 Query 222 SSKPRGNQA--------------AAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDF 267 P GN A V+ TI +G S V + PDG AYV + S+ Sbjct 390 DITPGGNLIYVVNKVSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQASNT 449 Query 268 GAVVDV 273 +V+D+ Sbjct 450 VSVIDI 455 Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 46/129 (36%), Positives = 67/129 (52%), Gaps = 5/129 (3%) Query 42 IAISRDGSLLVVTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSS 101 I + DG+ VTN ++TVSV+ T T V T+ EP I + N YV V+ Sbjct 347 IVFTLDGTRAYVTNQNSNTVSVINTATNAVINTINVGTEPVGIDI-TPGGNLIYV--VNK 403 Query 102 AYDAIAVIDVATNTVLGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALI 161 + ++VI+VATNTV+ T + LS +T+ PD YV+ + V+V+D T +I Sbjct 404 VSNNVSVINVATNTVIDTISVGLSPDQVTIIPDGTRAYVTNQASN--TVSVIDIATNTVI 461 Query 162 DVVDVSQAP 170 V V AP Sbjct 462 TNVPVGVAP 470 >gi|73668352|ref|YP_304367.1| putative surface layer protein [Methanosarcina barkeri str. Fusaro] gi|72395514|gb|AAZ69787.1| putative surface layer protein [Methanosarcina barkeri str. Fusaro] Length=1094 Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 89/306 (30%), Positives = 147/306 (49%), Gaps = 62/306 (20%) Query 53 VTNNGTDTVSVVGTDTCRVTQTVTSVNEPFAIAMGNAEANRAYVSTVSSAYDAIAVIDVA 112 +TN+G+ TVSV+ T +VT T T P+ +A+ N + YVS S ++++VID A Sbjct 45 ITNSGSTTVSVIDITTNKVTATATVGKYPYGVAV-NPAGTKVYVSKERS--NSVSVIDTA 101 Query 113 TNTV-----LGTHPLALSVSDLTLSPDDKYLYVSRNGTRGADVAVLDTTTGALIDVVDVS 167 TN V +G HP ++V SPD +YV+ G++ V+V+DT + V V Sbjct 102 TNKVTATVKVGKHPWGVAV-----SPDGTRVYVANEGSK--TVSVIDTEKNKVTATVTVG 154 Query 168 QAPGTTTQC-VRMSPDGSVLYVGANGPSGGLLVVITTRAQSDGGRIGSRSRSRQKSSKPR 226 + P C V ++P G+ +YV N + + V+ T Sbjct 155 KYP-----CGVAVNPAGTKVYV-TNTLANTVSVIDT------------------------ 184 Query 227 GNQAAAGLRVVATIDIGSSVRDVALSPDGAIAYVASCGSDFGAVVDVIDTRTHQITSSRA 286 A +V ATI +G+ +A++P G YV +++ V VIDT +++T A Sbjct 185 -----ATNKVTATIKVGNLPTGIAVNPAGTRVYVT---NEYD--VSVIDTTKNKVT---A 231 Query 287 ISEIGGLVTRVSVSGDADRAYLVS--EDRVTVLCTRTHDVIGTIRTGQ-PSCVVESPDGK 343 ++G V+V+ + Y+ + +D ++V+ T T+ V T++ G P V SPDG Sbjct 232 RVKVGKYPWGVAVNPAGTKVYVANYGDDTISVINTATNKVTDTLKVGSCPFGVAFSPDGT 291 Query 344 YLYIAD 349 Y+A Sbjct 292 RAYVAK 297 Lambda K H 0.315 0.130 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 767373824232 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40