BLAST Search Results

BLASTP 2.2.25+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Alejandro A. Schäffer, L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,229,318 sequences; 5,219,829,388 total letters Query= Rv1060 Length=157 Score E Sequences producing significant alignments: (Bits) Value gi|15608200|ref|NP_215576.1| hypothetical protein Rv1060 [Mycoba... 314 2e-84 gi|340626071|ref|YP_004744523.1| hypothetical protein MCAN_10661... 308 2e-82 gi|240170306|ref|ZP_04748965.1| hypothetical protein MkanA1_1341... 240 4e-62 gi|183984377|ref|YP_001852668.1| hypothetical protein MMAR_4406 ... 209 1e-52 gi|118616108|ref|YP_904440.1| hypothetical protein MUL_0221 [Myc... 206 1e-51 gi|167967663|ref|ZP_02549940.1| hypothetical protein MtubH3_0635... 200 6e-50 gi|120405641|ref|YP_955470.1| hypothetical protein Mvan_4689 [My... 191 2e-47 gi|289442487|ref|ZP_06432231.1| conserved hypothetical protein [... 190 5e-47 gi|145222616|ref|YP_001133294.1| hypothetical protein Mflv_2028 ... 187 4e-46 gi|315443081|ref|YP_004075960.1| polyketide cyclase / dehydrase ... 185 2e-45 gi|41407107|ref|NP_959943.1| hypothetical protein MAP1009 [Mycob... 181 3e-44 gi|254774070|ref|ZP_05215586.1| hypothetical protein MaviaA2_052... 180 6e-44 gi|118465043|ref|YP_880433.1| hypothetical protein MAV_1187 [Myc... 180 8e-44 gi|326332311|ref|ZP_08198591.1| hypothetical protein NBCG_03753 ... 157 5e-37 gi|84497519|ref|ZP_00996341.1| hypothetical protein JNB_15033 [J... 144 5e-33 gi|88855207|ref|ZP_01129872.1| hypothetical protein A20C1_04976 ... 78.2 4e-13 gi|284033767|ref|YP_003383698.1| hypothetical protein Kfla_5895 ... 68.9 2e-10 gi|149927007|ref|ZP_01915265.1| hypothetical protein LMED105_091... 50.1 1e-04 gi|345013238|ref|YP_004815592.1| polyketide cyclase/dehydrase [S... 48.9 2e-04 gi|29827975|ref|NP_822609.1| hypothetical protein SAV_1434 [Stre... 42.7 0.016 gi|291441151|ref|ZP_06580541.1| conserved hypothetical protein [... 41.6 0.044 gi|170747517|ref|YP_001753777.1| hypothetical protein Mrad2831_1... 40.8 0.076 gi|297197698|ref|ZP_06915095.1| conserved hypothetical protein [... 40.0 0.12 gi|116672328|ref|YP_833261.1| hypothetical protein Arth_3786 [Ar... 39.7 0.14 gi|119962006|ref|YP_949252.1| hypothetical protein AAur_3559 [Ar... 39.7 0.17 gi|304394011|ref|ZP_07375934.1| conserved hypothetical protein [... 39.3 0.19 gi|85710143|ref|ZP_01041208.1| hypothetical protein NAP1_14698 [... 38.9 0.24 gi|158314759|ref|YP_001507267.1| AMP-dependent synthetase and li... 38.9 0.24 gi|253999696|ref|YP_003051759.1| Bet v I allergen [Methylovorus ... 38.9 0.26 gi|302540789|ref|ZP_07293131.1| polyketide cyclase/dehydrase sup... 38.1 0.43 gi|114328071|ref|YP_745228.1| hypothetical protein GbCGDNIH1_140... 38.1 0.47 gi|254385383|ref|ZP_05000711.1| conserved hypothetical protein [... 37.4 0.67 gi|183983454|ref|YP_001851745.1| hypothetical protein MMAR_3471 ... 37.4 0.82 gi|124267605|ref|YP_001021609.1| MxaD protein [Methylibium petro... 37.0 0.93 gi|46204311|ref|ZP_00050185.2| hypothetical protein Magn03003934... 37.0 0.97 gi|182440339|ref|YP_001828058.1| hypothetical protein SGR_6546 [... 37.0 1.0 gi|326781006|ref|ZP_08240271.1| Polyketide cyclase/dehydrase [St... 37.0 1.0 gi|220914244|ref|YP_002489553.1| hypothetical protein Achl_3508 ... 36.6 1.1 gi|89055121|ref|YP_510572.1| hypothetical protein Jann_2630 [Jan... 36.2 1.6 gi|119898313|ref|YP_933526.1| hypothetical protein azo2022 [Azoa... 36.2 1.6 gi|256422597|ref|YP_003123250.1| Radical SAM domain protein [Chi... 36.2 1.6 gi|337270287|ref|YP_004614342.1| alcohol dehydrogenase zinc-bind... 35.8 2.2 gi|300788198|ref|YP_003768489.1| hypothetical protein AMED_6353 ... 35.4 2.9 gi|317407503|gb|EFV87457.1| radical SAM [Achromobacter xylosoxid... 35.4 3.0 gi|340529783|gb|AEK44988.1| hypothetical protein RAM_32575 [Amyc... 35.4 3.0 gi|311106993|ref|YP_003979846.1| radical SAM superfamily protein... 35.4 3.1 gi|253996147|ref|YP_003048211.1| hypothetical protein Mmol_0774 ... 34.7 4.8 gi|108802095|ref|YP_642292.1| hypothetical protein Mmcs_5132 [My... 34.7 5.0 gi|53803522|ref|YP_114797.1| MxaD gene product [Methylococcus ca... 34.7 5.1 gi|296128121|ref|YP_003635371.1| Polyketide cyclase/dehydrase [C... 33.9 7.3 >gi|15608200|ref|NP_215576.1| hypothetical protein Rv1060 [Mycobacterium tuberculosis H37Rv] gi|15840493|ref|NP_335530.1| hypothetical protein MT1090 [Mycobacterium tuberculosis CDC1551] gi|31792251|ref|NP_854744.1| hypothetical protein Mb1089 [Mycobacterium bovis AF2122/97] 75 more sequence titles Length=157 Score = 314 bits (805), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 157/157 (100%), Positives = 157/157 (100%), Gaps = 0/157 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR Sbjct 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW Sbjct 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG Sbjct 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 >gi|340626071|ref|YP_004744523.1| hypothetical protein MCAN_10661 [Mycobacterium canettii CIPT 140010059] gi|340004261|emb|CCC43402.1| hypothetical protein MCAN_10661 [Mycobacterium canettii CIPT 140010059] Length=157 Score = 308 bits (789), Expect = 2e-82, Method: Compositional matrix adjust. Identities = 154/157 (99%), Positives = 155/157 (99%), Gaps = 0/157 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQ R Sbjct 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQTR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 VITMVGGGRVREELTSVDPPRSFGYTLTDIKG LAPLVALVEGKWSFAPADTGTTVTWQW Sbjct 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGLLAPLVALVEGKWSFAPADTGTTVTWQW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 TIHPRSALAAPVLPVFARMW+GYARGVLEKLSALLVG Sbjct 121 TIHPRSALAAPVLPVFARMWQGYARGVLEKLSALLVG 157 >gi|240170306|ref|ZP_04748965.1| hypothetical protein MkanA1_13418 [Mycobacterium kansasii ATCC 12478] Length=152 Score = 240 bits (613), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 116/152 (77%), Positives = 130/152 (86%), Gaps = 0/152 (0%) Query 6 VVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQARVITMV 65 +VEQSRAIPV EDAF TL ALPVICS WYG+IPPIKEVRDQTG WD+ GQ+RVI MV Sbjct 1 MVEQSRAIPVAVEDAFSRTLPIALPVICSRWYGVIPPIKEVRDQTGDWDAAGQSRVIAMV 60 Query 66 GGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPR 125 GGG VRE LT+VDPPRSF YTLTDIKGPLAPLV+LVEGKWSF PA TGT V WQWT+HP+ Sbjct 61 GGGLVRETLTNVDPPRSFSYTLTDIKGPLAPLVSLVEGKWSFVPAGTGTRVAWQWTLHPK 120 Query 126 SALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 S ++AP+LP+F RMW+GYAR VLEKL+ LVG Sbjct 121 SGVSAPLLPLFGRMWKGYARIVLEKLAEQLVG 152 >gi|183984377|ref|YP_001852668.1| hypothetical protein MMAR_4406 [Mycobacterium marinum M] gi|183177703|gb|ACC42813.1| conserved hypothetical protein [Mycobacterium marinum M] Length=157 Score = 209 bits (532), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 103/155 (67%), Positives = 117/155 (76%), Gaps = 0/155 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MA +VVEQS IPV + AF GTL A LP + +HWYG IPPIKEVRDQTG WD+ GQ R Sbjct 1 MATPIVVEQSLVIPVPGDQAFRGTLPAPLPEVFNHWYGPIPPIKEVRDQTGDWDAAGQTR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 + MVGGG V EELTS+D PRSFGY L+DIKGP+A LV V G W F PAD GT +TW+W Sbjct 61 KLFMVGGGSVHEELTSLDSPRSFGYRLSDIKGPMALLVGQVVGAWIFTPADGGTEITWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALL 155 TIHP+SALAAP LPVF +W+GYAR L LSALL Sbjct 121 TIHPKSALAAPALPVFGMLWKGYARRALRNLSALL 155 >gi|118616108|ref|YP_904440.1| hypothetical protein MUL_0221 [Mycobacterium ulcerans Agy99] gi|118568218|gb|ABL02969.1| conserved hypothetical protein [Mycobacterium ulcerans Agy99] Length=157 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 102/155 (66%), Positives = 116/155 (75%), Gaps = 0/155 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MA +VVEQS IPV + AF GTL A LP + +HWYG IPPIKEVRDQTG WD+ GQ R Sbjct 1 MATPIVVEQSLVIPVPGDQAFRGTLPAPLPEVFNHWYGPIPPIKEVRDQTGDWDAAGQTR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 + MVGGG V EELTS+D PRSFGY L+DIKGP+A LV V G W F PAD GT +TW+W Sbjct 61 KLFMVGGGSVHEELTSLDSPRSFGYRLSDIKGPMALLVGQVVGAWIFTPADGGTEITWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALL 155 TIH +SALAAP LPVF +W+GYAR L LSALL Sbjct 121 TIHRKSALAAPALPVFGMLWKGYARRALRNLSALL 155 >gi|167967663|ref|ZP_02549940.1| hypothetical protein MtubH3_06351 [Mycobacterium tuberculosis H37Ra] Length=102 Score = 200 bits (508), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 100/102 (99%), Positives = 101/102 (99%), Gaps = 0/102 (0%) Query 56 VGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTT 115 +GQARVITMVGGGRVREELTSV PPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTT Sbjct 1 MGQARVITMVGGGRVREELTSVHPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTT 60 Query 116 VTWQWTIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 VTWQWTIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG Sbjct 61 VTWQWTIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 102 >gi|120405641|ref|YP_955470.1| hypothetical protein Mvan_4689 [Mycobacterium vanbaalenii PYR-1] gi|119958459|gb|ABM15464.1| conserved hypothetical protein [Mycobacterium vanbaalenii PYR-1] Length=162 Score = 191 bits (486), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 94/157 (60%), Positives = 118/157 (76%), Gaps = 0/157 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 M K+ ++EQSRAIPV E A+ T+ LP + S WYG I P+K VRDQTG W+SVGQ+R Sbjct 1 MPKAHLMEQSRAIPVDVETAYRRTVPMPLPTLFSRWYGPIAPVKAVRDQTGDWNSVGQSR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 + VGGG +REELT+VD P +FGYTL+ I G LAPLV +EG+W FAPA TGT VTW+W Sbjct 61 TVVQVGGGTMREELTAVDAPHAFGYTLSGITGALAPLVDHIEGQWLFAPAGTGTEVTWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 T++PRSA A V+P FAR+WRG+AR LE+LS L+G Sbjct 121 TVYPRSAAAGLVMPAFARLWRGFARQSLEQLSRELLG 157 >gi|289442487|ref|ZP_06432231.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] gi|289415406|gb|EFD12646.1| conserved hypothetical protein [Mycobacterium tuberculosis T46] Length=125 Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 95/95 (100%), Positives = 95/95 (100%), Gaps = 0/95 (0%) Query 63 TMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTI 122 TMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTI Sbjct 31 TMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTI 90 Query 123 HPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 HPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG Sbjct 91 HPRSALAAPVLPVFARMWRGYARGVLEKLSALLVG 125 >gi|145222616|ref|YP_001133294.1| hypothetical protein Mflv_2028 [Mycobacterium gilvum PYR-GCK] gi|145215102|gb|ABP44506.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK] Length=158 Score = 187 bits (475), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 89/156 (58%), Positives = 116/156 (75%), Gaps = 0/156 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 M + V+EQSRAIPV + AF TL LP + S WYG I P+K+VRDQTG W +VGQ R Sbjct 1 MPTAHVMEQSRAIPVDVDTAFRHTLPMPLPTLFSRWYGPISPVKQVRDQTGDWGTVGQTR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 + VGGG +REELT +DPPR+FGYTL+ + GPLAPLV ++G+W F+P TGT VTW+W Sbjct 61 TVVQVGGGSMREELTLLDPPRAFGYTLSGVTGPLAPLVDHIDGQWHFSPVGTGTEVTWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLV 156 T++PR+A+A +P FAR+WRG+AR LE+LS L+ Sbjct 121 TVYPRNAVAGLAMPGFARLWRGFARVSLEQLSNELL 156 >gi|315443081|ref|YP_004075960.1| polyketide cyclase / dehydrase and lipid transport [Mycobacterium sp. Spyr1] gi|315261384|gb|ADT98125.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium sp. Spyr1] Length=158 Score = 185 bits (470), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 89/156 (58%), Positives = 115/156 (74%), Gaps = 0/156 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 M + V+EQSRAIPV + AF TL LP + S WYG I P+K+VRDQTG W +VGQ R Sbjct 1 MPTAHVMEQSRAIPVDVDTAFRHTLPMPLPTLFSRWYGPISPVKQVRDQTGDWGTVGQTR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 + VGGG +REELT +DPPR+FGYTL+ + GPLAPLV ++G+W FAP TGT VTW+W Sbjct 61 TVVQVGGGSMREELTLLDPPRAFGYTLSGVTGPLAPLVDHIDGQWHFAPVGTGTEVTWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALLV 156 T++PR+A+A +P FAR+WRG+AR L +LS L+ Sbjct 121 TVYPRNAVAGLAMPGFARLWRGFARVSLGQLSNELL 156 >gi|41407107|ref|NP_959943.1| hypothetical protein MAP1009 [Mycobacterium avium subsp. paratuberculosis K-10] gi|41395458|gb|AAS03326.1| hypothetical protein MAP_1009 [Mycobacterium avium subsp. paratuberculosis K-10] gi|336461469|gb|EGO40339.1| Polyketide cyclase / dehydrase and lipid transport [Mycobacterium avium subsp. paratuberculosis S397] Length=157 Score = 181 bits (459), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 89/155 (58%), Positives = 108/155 (70%), Gaps = 0/155 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MA S+VV QS PV + DAFG TL LP + + WYG PPI+EVR QTG WD+ G+ R Sbjct 1 MADSLVVAQSVVAPVAASDAFGRTLPMPLPTLFNRWYGPFPPIREVRGQTGDWDAAGRQR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 ++ + GG +REELTSVDPPRSFGY L+ I GP+A LV V G+W F PA GT +TW+W Sbjct 61 IVHLAGGASMREELTSVDPPRSFGYRLSGITGPMALLVNHVLGEWVFTPAAGGTEITWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALL 155 IHPRS L A LP+ RMW+GYAR L+ L ALL Sbjct 121 DIHPRSPLTAWALPLLGRMWKGYARRALDNLVALL 155 >gi|254774070|ref|ZP_05215586.1| hypothetical protein MaviaA2_05273 [Mycobacterium avium subsp. avium ATCC 25291] Length=157 Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 89/155 (58%), Positives = 108/155 (70%), Gaps = 0/155 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MA S+VV QS PV + DAFG TL LP + + WYG PPI+EVR QTG WD+ G+ R Sbjct 1 MADSLVVAQSVVAPVAAPDAFGRTLPMPLPTLFNRWYGPFPPIREVRGQTGDWDAAGRQR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 ++ + GG +REELTSVDPPRSFGY L+ I GP+A LV V G+W F PA GT +TW+W Sbjct 61 IVHLAGGASMREELTSVDPPRSFGYRLSGITGPMALLVNHVLGEWVFTPAAGGTEITWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALL 155 IHPRS L A LP+ RMW+GYAR L+ L ALL Sbjct 121 DIHPRSPLTAWALPLLGRMWKGYARRALDNLVALL 155 >gi|118465043|ref|YP_880433.1| hypothetical protein MAV_1187 [Mycobacterium avium 104] gi|118166330|gb|ABK67227.1| conserved hypothetical protein [Mycobacterium avium 104] Length=157 Score = 180 bits (456), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 89/155 (58%), Positives = 108/155 (70%), Gaps = 0/155 (0%) Query 1 MAKSVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQAR 60 MA S+VV QS PV + DAFG TL LP + + WYG PPI+EVR QTG WD+ G+ R Sbjct 1 MADSLVVAQSVVAPVAAPDAFGRTLPMPLPTLFNRWYGPFPPIREVRGQTGDWDAAGRQR 60 Query 61 VITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQW 120 ++ + GG +REELTSVDPPRSFGY L+ I GP+A LV V G+W F PA GT +TW+W Sbjct 61 IVHLAGGASMREELTSVDPPRSFGYRLSGITGPMALLVNHVLGEWVFTPAAGGTEITWRW 120 Query 121 TIHPRSALAAPVLPVFARMWRGYARGVLEKLSALL 155 IHPRS L A LP+ RMW+GYAR L+ L ALL Sbjct 121 DIHPRSPLTAWALPLLGRMWQGYARRALDNLVALL 155 >gi|326332311|ref|ZP_08198591.1| hypothetical protein NBCG_03753 [Nocardioidaceae bacterium Broad-1] gi|325950017|gb|EGD42077.1| hypothetical protein NBCG_03753 [Nocardioidaceae bacterium Broad-1] Length=161 Score = 157 bits (397), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 81/151 (54%), Positives = 95/151 (63%), Gaps = 0/151 (0%) Query 7 VEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQARVITMVG 66 +E SRA+PV E A L A LP I H Y I PI EVRDQ G WDSVG+ R I + Sbjct 10 LESSRAVPVAYETALARVLPAPLPQIFGHRYAAIGPIAEVRDQAGGWDSVGETRTIVLSD 69 Query 67 GGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRS 126 G +RE LT +D P SF Y +T + GPL LV V G+WSFAPA TGT VTW W + P S Sbjct 70 GATMRETLTGIDAPSSFTYEITPLSGPLKLLVGHVAGRWSFAPAGTGTRVTWSWDVTPTS 129 Query 127 ALAAPVLPVFARMWRGYARGVLEKLSALLVG 157 + A+ +PVF MW+GYAR LE L LLVG Sbjct 130 SAASLAMPVFGWMWKGYARQSLEALEELLVG 160 >gi|84497519|ref|ZP_00996341.1| hypothetical protein JNB_15033 [Janibacter sp. HTCC2649] gi|84382407|gb|EAP98289.1| hypothetical protein JNB_15033 [Janibacter sp. HTCC2649] Length=155 Score = 144 bits (362), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/153 (50%), Positives = 96/153 (63%), Gaps = 1/153 (0%) Query 4 SVVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQARVIT 63 ++ + QSRA+PV E+AF L LP I IPPIKEVRDQ G W SVGQ R I Sbjct 3 TLKLSQSRAVPVPVEEAFDRVLPYPLPEIFRRRSVAIPPIKEVRDQVGEWGSVGQTRTIV 62 Query 64 MVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIH 123 GG +RE LTS+D P SFGYT++ + GP+ PL+A G+WSF A TGT +TW W I Sbjct 63 TTDGGTLRETLTSLDRPGSFGYTISPLSGPMKPLIASAIGRWSFDSAGTGTRITWAWDIT 122 Query 124 PRSALAAPVLPVFARMWRGYARGVLEKLSALLV 156 P +A ++P F MW YAR LE++ A+L+ Sbjct 123 PTTA-GRLLMPAFGAMWNSYARKALEEVEAILL 154 >gi|88855207|ref|ZP_01129872.1| hypothetical protein A20C1_04976 [marine actinobacterium PHSC20C1] gi|88815735|gb|EAR25592.1| hypothetical protein A20C1_04976 [marine actinobacterium PHSC20C1] Length=159 Score = 78.2 bits (191), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 41/119 (35%), Positives = 60/119 (51%), Gaps = 0/119 (0%) Query 30 PVICSHWYGLIPPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTD 89 P + +G +P + EVR+Q+G+WD+VG+ R + + GG V E +T P FGY L+D Sbjct 37 PTLFYPRFGPLPAVVEVRNQSGSWDTVGRTRTLMLSDGGHVVETITDAHSPLLFGYELSD 96 Query 90 IKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRSALAAPVLPVFARMWRGYARGVL 148 + LV+ +W F P +G V W +T R A V + W Y R VL Sbjct 97 FQKLFGTLVSGARAEWRFEPLRSGAIVQWTYTFFARPARGWIVRLIVRLWWARYMRKVL 155 >gi|284033767|ref|YP_003383698.1| hypothetical protein Kfla_5895 [Kribbella flavida DSM 17836] gi|283813060|gb|ADB34899.1| hypothetical protein Kfla_5895 [Kribbella flavida DSM 17836] Length=163 Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 51/157 (33%), Positives = 66/157 (43%), Gaps = 12/157 (7%) Query 5 VVVEQSRAIPVQSEDAFGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSVGQARVITM 64 V +SR P + AF + LP + P + V +QT AWD VG +R Sbjct 14 TVQRRSRLTPTE---AFDRIVPIDLPSVFQA-VRPFPGVARVDNQTEAWDHVGPSRNPVF 69 Query 65 VGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHP 124 G R E LT RSF Y LTD L L V G+W+F+ +GT V W + P Sbjct 70 DDGSRATETLTEYAEGRSFAYELTDFTNVLGRLAYGVRGEWTFSTDGSGTLVRWCYEFKP 129 Query 125 RSA----LAAPVLPVFARMWRGYARGVLEKLSALLVG 157 R LA P P W Y R L ++ + G Sbjct 130 RPGRRWILAGPFKP----FWTRYMRAALHRIVTVAEG 162 >gi|149927007|ref|ZP_01915265.1| hypothetical protein LMED105_09137 [Limnobacter sp. MED105] gi|149824228|gb|EDM83448.1| hypothetical protein LMED105_09137 [Limnobacter sp. MED105] Length=166 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 37/120 (31%), Positives = 55/120 (46%), Gaps = 4/120 (3%) Query 6 VVEQSRAIPVQSEDAFG-GTLAAALPVICSHWYGLIPPIKEVRD-QTGAWDSVGQARVIT 63 ++++S IPV D F T A I H LI PI + Q +++ VG + IT Sbjct 1 MIQRSCRIPVPLADCFALYTRLKADEYI--HSDALIAPITHIEMIQGKSFNEVGDVQRIT 58 Query 64 MVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIH 123 GG + EE+ + P R F Y T PL + +G + F GT VTW++ + Sbjct 59 FKGGAVIDEEVLAFVPNRQFVYRGTGFSQPLLSWLDHAKGSFEFEKDGDGTLVTWRYLFY 118 >gi|345013238|ref|YP_004815592.1| polyketide cyclase/dehydrase [Streptomyces violaceusniger Tu 4113] gi|344039587|gb|AEM85312.1| Polyketide cyclase/dehydrase [Streptomyces violaceusniger Tu 4113] Length=157 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 29/74 (40%), Positives = 40/74 (55%), Gaps = 8/74 (10%) Query 43 IKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVE 102 +KE R G G+ R I +VGGGR RE + +VDP + Y + + P L AL+E Sbjct 50 VKEARSTDG-----GKGRAIRLVGGGRFRETVMAVDPHERYAYRVDETNAP--GLRALLE 102 Query 103 GKWSFAPADTGTTV 116 +W+ P D G TV Sbjct 103 -EWTLRPTDGGGTV 115 >gi|29827975|ref|NP_822609.1| hypothetical protein SAV_1434 [Streptomyces avermitilis MA-4680] gi|29605076|dbj|BAC69144.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length=159 Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust. Identities = 26/87 (30%), Positives = 39/87 (45%), Gaps = 11/87 (12%) Query 34 SHWYGLIPPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGP 93 S W+G + + V D G R + + GG R RE + P + Y + + P Sbjct 45 SEWFGAVTSARPVED--------GAGREVRLKGGTRFRETVVVAKPAEVYAYRVDETNAP 96 Query 94 LAPLVALVEGKWSFAPADTGTTVTWQW 120 + AL+E +W PA TGT V W + Sbjct 97 --GMSALLE-EWRLTPAGTGTRVQWTF 120 >gi|291441151|ref|ZP_06580541.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] gi|291344046|gb|EFE71002.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672] Length=156 Score = 41.6 bits (96), Expect = 0.044, Method: Compositional matrix adjust. Identities = 27/87 (32%), Positives = 40/87 (46%), Gaps = 11/87 (12%) Query 34 SHWYGLIPPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGP 93 S W+G + P + + G R I + GG R RE + + + P+ + Y + P Sbjct 45 SEWFGAVTPARPL--------DGGAGREIRLRGGTRFRETILAAEEPQVYAYRVDVTNAP 96 Query 94 LAPLVALVEGKWSFAPADTGTTVTWQW 120 A AL E +W PA TGT V W + Sbjct 97 GA--RALAE-EWRLEPAGTGTRVRWTF 120 >gi|170747517|ref|YP_001753777.1| hypothetical protein Mrad2831_1085 [Methylobacterium radiotolerans JCM 2831] gi|170654039|gb|ACB23094.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length=161 Score = 40.8 bits (94), Expect = 0.076, Method: Compositional matrix adjust. Identities = 24/70 (35%), Positives = 39/70 (56%), Gaps = 3/70 (4%) Query 58 QARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVT 117 + R +++ GGG ++EE S D + YT T ++ PL V+ + S APA +G+ VT Sbjct 70 KVRTLSLKGGGTIKEEQVSRDD-KVMSYTYTILESPLP--VSDYKSTLSVAPAGSGSKVT 126 Query 118 WQWTIHPRSA 127 W T + + A Sbjct 127 WTGTFNAKGA 136 >gi|297197698|ref|ZP_06915095.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] gi|197717428|gb|EDY61462.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083] Length=159 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 6/100 (6%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R I + GGGR +E + + + P + Y + P A +A +W PA GT V Sbjct 60 GSTREIHLRGGGRFQETILTAEAPEVYAYRVDVANAPGARAIA---EEWRLTPAGPGTHV 116 Query 117 TWQWTIHPRSALAAPV---LPVFARMWRGYARGVLEKLSA 153 W + + +A A P R +R R + +L+A Sbjct 117 RWTFAVDGTAAFRAVARLGRPGLGRAFRDAVRRLDRRLAA 156 >gi|116672328|ref|YP_833261.1| hypothetical protein Arth_3786 [Arthrobacter sp. FB24] gi|116612437|gb|ABK05161.1| hypothetical protein Arth_3786 [Arthrobacter sp. FB24] Length=159 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 23/60 (39%), Positives = 29/60 (49%), Gaps = 4/60 (6%) Query 73 ELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRSALAAPV 132 + S PPR+ G T+ + GP A G W F PAD GT W++T R A PV Sbjct 66 QYVSYAPPRNVGMTM--VSGPW--FFANFGGGWRFTPADGGTRAVWKYTFSCRPAWLRPV 121 >gi|119962006|ref|YP_949252.1| hypothetical protein AAur_3559 [Arthrobacter aurescens TC1] gi|119948865|gb|ABM07776.1| hypothetical protein AAur_3559 [Arthrobacter aurescens TC1] Length=164 Score = 39.7 bits (91), Expect = 0.17, Method: Compositional matrix adjust. Identities = 23/66 (35%), Positives = 31/66 (47%), Gaps = 4/66 (6%) Query 67 GGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRS 126 G ++ E S PPR+ G T+ + GP G W F P D GT W++T R Sbjct 60 GLKMVSEYVSYTPPRNVGMTM--VSGPW--FFENFGGGWRFTPDDGGTRAVWKYTFSCRP 115 Query 127 ALAAPV 132 AL P+ Sbjct 116 ALVKPL 121 >gi|304394011|ref|ZP_07375934.1| conserved hypothetical protein [Ahrensia sp. R2A130] gi|303293451|gb|EFL87828.1| conserved hypothetical protein [Ahrensia sp. R2A130] Length=153 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/68 (36%), Positives = 32/68 (48%), Gaps = 5/68 (7%) Query 54 DSVGQARVITMVGGGRVREELTSV-DPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADT 112 D VG R T+ GG +RE+L ++ D +S+ Y L D PL V+ V P Sbjct 46 DRVGCVRRFTLADGGELREKLLTLSDLEQSYSYCLLDTPVPLFNYVSHVR----LLPVID 101 Query 113 GTTVTWQW 120 G WQW Sbjct 102 GNATFWQW 109 >gi|85710143|ref|ZP_01041208.1| hypothetical protein NAP1_14698 [Erythrobacter sp. NAP1] gi|85688853|gb|EAQ28857.1| hypothetical protein NAP1_14698 [Erythrobacter sp. NAP1] Length=151 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 23/115 (20%), Positives = 47/115 (41%), Gaps = 2/115 (1%) Query 45 EVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGK 104 +VR +G W G R + + G E + P F Y + + + + +G+ Sbjct 26 DVRVVSGNWPEKGSVRWVKLSDGHYTYERVLENRLPEHFSYQIWGLTSSASDHITYAKGQ 85 Query 105 WSFAP-ADTGTTVTWQWTIHPRSALAAPVLPVFARM-WRGYARGVLEKLSALLVG 157 W + D + TW +++ P S + P + F R + G +++++ G Sbjct 86 WDWREVEDDKSEFTWTYSLRPNSFIKRPFVSSFLESDMRPFMEGAIDRMTVKAEG 140 >gi|158314759|ref|YP_001507267.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec] gi|158110164|gb|ABW12361.1| AMP-dependent synthetase and ligase [Frankia sp. EAN1pec] Length=773 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 36/123 (30%), Positives = 57/123 (47%), Gaps = 11/123 (8%) Query 34 SHWYGLIPPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKG- 92 S W+ P + ++ G +G R++ M G +RE++T ++P R Y I G Sbjct 27 STWF---PGVAVALERPGVQGGIGAVRIVRMTGLS-IREQVTDIEPARRLAYRC--ISGH 80 Query 93 PLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRSALAAPVLPVFARMWRGYARGVLEKLS 152 PL G+ AP+ TGT++TW R L A +L AR++ E+ S Sbjct 81 PLRDY----RGEIFLAPSGTGTSLTWVLDTSTRFRLVAWLLVNQARLFAWSLARAAERSS 136 Query 153 ALL 155 AL+ Sbjct 137 ALI 139 >gi|253999696|ref|YP_003051759.1| Bet v I allergen [Methylovorus glucosetrophus SIP3-4] gi|313201744|ref|YP_004040402.1| bet v i allergen [Methylovorus sp. MP688] gi|253986375|gb|ACT51232.1| Bet v I allergen [Methylovorus glucosetrophus SIP3-4] gi|312441060|gb|ADQ85166.1| Bet v I allergen [Methylovorus sp. MP688] Length=166 Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust. Identities = 38/146 (27%), Positives = 63/146 (44%), Gaps = 18/146 (12%) Query 2 AKSVVVEQSRAIPVQSEDAFG-----GTLAAALPVICSHWYGLIPPIKEVRDQTGAWDSV 56 A S+ EQS I +++D + G L A W+ P + G + V Sbjct 22 AGSLKAEQSIEINAKADDVWATSSNFGDLGA--------WH---PAATKTEIVEGTNNQV 70 Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G RVIT+ GG+++E+L + D + Y+ T ++G L P+ A T V Sbjct 71 GAVRVITLPDGGKLKEKLEAYDAKKHT-YSYTILEGVL-PVSNYHSTYTVHAIGANKTKV 128 Query 117 TWQWTIHPRSALAAPVLPVFARMWRG 142 TW+ T + A A + +++G Sbjct 129 TWKGTFNAAGASNADAVKTINGVYKG 154 >gi|302540789|ref|ZP_07293131.1| polyketide cyclase/dehydrase superfamily protein [Streptomyces hygroscopicus ATCC 53653] gi|302458407|gb|EFL21500.1| polyketide cyclase/dehydrase superfamily protein [Streptomyces himastatinicus ATCC 53653] Length=156 Score = 38.1 bits (87), Expect = 0.43, Method: Compositional matrix adjust. Identities = 22/66 (34%), Positives = 34/66 (52%), Gaps = 3/66 (4%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R I +VGG R RE + + DP + Y + + P L AL+E +W P +GT V Sbjct 59 GTGREIRLVGGTRFRETVVAADPCERYAYRIDETNVP--GLRALLE-EWRLVPWHSGTVV 115 Query 117 TWQWTI 122 + + + Sbjct 116 RYTFAL 121 >gi|114328071|ref|YP_745228.1| hypothetical protein GbCGDNIH1_1407 [Granulibacter bethesdensis CGDNIH1] gi|114316245|gb|ABI62305.1| hypothetical protein GbCGDNIH1_1407 [Granulibacter bethesdensis CGDNIH1] Length=157 Score = 38.1 bits (87), Expect = 0.47, Method: Compositional matrix adjust. Identities = 29/107 (28%), Positives = 50/107 (47%), Gaps = 10/107 (9%) Query 45 EVRDQTGAWDSVGQARVITMVGGGR-VREELTSVDPPRSFGYTLTDIKGPLAPLVALVEG 103 E+ D GA + R +++ GGG V +++ D +S+ YT+ + P+A + + Sbjct 58 ELVDVAGA-----EQRTLSLKGGGTIVEQQVDRNDAKKSYTYTIQESPLPVANYKSTI-- 110 Query 104 KWSFAPADTGTTVTWQWTIHPRSALAAPVLPVFARMWRGYARGVLEK 150 S PA G+ VTW + A A V A ++ G G+ +K Sbjct 111 --SVTPAKGGSEVTWVGHFDAKGASDAEAAKVIAGIYEGGLAGIAKK 155 >gi|254385383|ref|ZP_05000711.1| conserved hypothetical protein [Streptomyces sp. Mg1] gi|194344256|gb|EDX25222.1| conserved hypothetical protein [Streptomyces sp. Mg1] Length=156 Score = 37.4 bits (85), Expect = 0.67, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 33/64 (52%), Gaps = 3/64 (4%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R I + GG R E + + DP + + Y + + P + AL+E +W P+ TGT V Sbjct 53 GAGREIRLAGGVRFHESVMAKDPGQRYAYRVDETNAP--GMRALLE-EWLLTPSGTGTRV 109 Query 117 TWQW 120 W + Sbjct 110 RWTF 113 >gi|183983454|ref|YP_001851745.1| hypothetical protein MMAR_3471 [Mycobacterium marinum M] gi|183176780|gb|ACC41890.1| conserved hypothetical protein [Mycobacterium marinum M] Length=144 Score = 37.4 bits (85), Expect = 0.82, Method: Compositional matrix adjust. Identities = 28/72 (39%), Positives = 37/72 (52%), Gaps = 6/72 (8%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R +T +G RE++T+VD PRS+ Y I PL+ G +F P+D GT V Sbjct 48 GAVREVTALGAW-FREQITAVDRPRSYSYL---ILRSFPPLIHQ-GGTLTFTPSDGGTHV 102 Query 117 TWQWT-IHPRSA 127 W T HP A Sbjct 103 DWLTTYTHPARA 114 >gi|124267605|ref|YP_001021609.1| MxaD protein [Methylibium petroleiphilum PM1] gi|124260380|gb|ABM95374.1| MxaD protein [Methylibium petroleiphilum PM1] Length=168 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/95 (29%), Positives = 42/95 (45%), Gaps = 5/95 (5%) Query 36 WYGLIPPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPR-SFGYTLTDIKGPL 94 W P I G ++ G RV+T G ++ EEL S S+ Y +TD P+ Sbjct 54 WQNWHPAIGGTEITKGKGNTKGTVRVLTTKDGAKITEELLSHSASSMSYKYRITDSPLPV 113 Query 95 APLVALVEGKWSFAPADTGTTVTWQWTIHPRSALA 129 V+ ++ A A G+TVTW T + ++ Sbjct 114 TDYVSTLK----VAKAKGGSTVTWSSTFKAKEGVS 144 >gi|46204311|ref|ZP_00050185.2| hypothetical protein Magn03003934 [Magnetospirillum magnetotacticum MS-1] Length=160 Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust. Identities = 25/92 (28%), Positives = 44/92 (48%), Gaps = 1/92 (1%) Query 60 RVITMVGGGRVREELTSVDPP-RSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTW 118 R +++ GGG + EE + D S+ YT+ D P+A V+ + + A G+ VTW Sbjct 67 RTLSLKGGGTLVEEQKARDEGGMSYTYTILDGPLPVANYVSTLTVTKEGSGAQAGSKVTW 126 Query 119 QWTIHPRSALAAPVLPVFARMWRGYARGVLEK 150 + + + A A V ++ +G+ EK Sbjct 127 RGSFEAKGAPDAKAQEVIGGIYEAGLKGIAEK 158 >gi|182440339|ref|YP_001828058.1| hypothetical protein SGR_6546 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468855|dbj|BAG23375.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length=159 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R + + GG R RE + + +P + Y + P L AL+E +W AP +GT V Sbjct 60 GAGREVRLRGGVRFRETIVAAEPDTCYAYRADESNAP--GLRALLE-EWRLAPEGSGTRV 116 Query 117 TWQW 120 W + Sbjct 117 QWTF 120 >gi|326781006|ref|ZP_08240271.1| Polyketide cyclase/dehydrase [Streptomyces cf. griseus XylebKG-1] gi|326661339|gb|EGE46185.1| Polyketide cyclase/dehydrase [Streptomyces griseus XylebKG-1] Length=159 Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust. Identities = 21/64 (33%), Positives = 32/64 (50%), Gaps = 3/64 (4%) Query 57 GQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTV 116 G R + + GG R RE + + +P + Y + P L AL+E +W AP +GT V Sbjct 60 GAGREVRLRGGVRFRETIVAAEPDTCYAYRADESNAP--GLRALLE-EWRLAPEGSGTRV 116 Query 117 TWQW 120 W + Sbjct 117 QWTF 120 >gi|220914244|ref|YP_002489553.1| hypothetical protein Achl_3508 [Arthrobacter chlorophenolicus A6] gi|219861122|gb|ACL41464.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6] Length=162 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/61 (35%), Positives = 28/61 (46%), Gaps = 4/61 (6%) Query 73 ELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTTVTWQWTIHPRSALAAPV 132 E S PPR+ G T+ + GP G W F D GT W++T R AL P+ Sbjct 66 EYVSYAPPRNVGMTM--VAGPW--FFGNFGGGWRFTADDGGTRAVWKYTFSCRPALLRPL 121 Query 133 L 133 + Sbjct 122 M 122 >gi|89055121|ref|YP_510572.1| hypothetical protein Jann_2630 [Jannaschia sp. CCS1] gi|88864670|gb|ABD55547.1| hypothetical protein Jann_2630 [Jannaschia sp. CCS1] Length=192 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/119 (27%), Positives = 48/119 (41%), Gaps = 6/119 (5%) Query 21 FGGTLAAALPVICSHWYGLIPPIKEVRDQTGAWDS-----VGQARVITMVGGGRVREELT 75 F + A LP + + P I EVR + VG R+ G + E L Sbjct 45 FDASPAEILPQLLTQVATYDPTISEVRFDHSRSSAPGEMGVGSVRICVFEDGRELHEPLL 104 Query 76 SVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADT-GTTVTWQWTIHPRSALAAPVL 133 DPP ++ YT+ L+ V+ + + FA + GT +T + PR PV+ Sbjct 105 VYDPPHAYAYTVDQDASTLSLPVSEIVLAYEFADNNAGGTDLTVRVFFDPRIPGTGPVI 163 >gi|119898313|ref|YP_933526.1| hypothetical protein azo2022 [Azoarcus sp. BH72] gi|119670726|emb|CAL94639.1| conserved hypothetical secreted protein [Azoarcus sp. BH72] Length=177 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 25/73 (35%), Positives = 37/73 (51%), Gaps = 5/73 (6%) Query 51 GAWDSVGQARVITMVGGGRVREELTSVDPPR-SFGYTLTDIKGPLAPLVALVEGKWSFAP 109 GA + VG R +T G R+ EEL + D R + Y +T+ P+ V+ + S AP Sbjct 72 GADNKVGAVRTVTTKDGARLVEELLAYDARRHAMTYRITESPLPVTHYVSTL----SVAP 127 Query 110 ADTGTTVTWQWTI 122 + G VTW+ T Sbjct 128 SGAGAVVTWKSTF 140 >gi|256422597|ref|YP_003123250.1| Radical SAM domain protein [Chitinophaga pinensis DSM 2588] gi|256037505|gb|ACU61049.1| Radical SAM domain protein [Chitinophaga pinensis DSM 2588] Length=732 Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 22/60 (37%), Positives = 28/60 (47%), Gaps = 4/60 (6%) Query 49 QTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGY----TLTDIKGPLAPLVALVEGK 104 + G W V +GGG EL S+ PR F + L D + PL LVA +EGK Sbjct 224 RCGQWIKANYPDVKIAMGGGFANTELRSLSDPRVFEFYDFIALDDGEAPLENLVAHIEGK 283 >gi|337270287|ref|YP_004614342.1| alcohol dehydrogenase zinc-binding domain-containing protein [Mesorhizobium opportunistum WSM2075] gi|336030597|gb|AEH90248.1| Alcohol dehydrogenase zinc-binding domain protein [Mesorhizobium opportunistum WSM2075] Length=504 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 24/74 (33%), Positives = 33/74 (45%), Gaps = 7/74 (9%) Query 54 DSVGQARVITMVGGGRVREELTSV-DPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADT 112 D+VG R + GG +RE+L ++ D R Y L + PL VA + K P Sbjct 46 DAVGSVRHFRLNDGGELREQLLALSDRDRRLSYCLLEAPLPLMGYVASLRLK----PVTD 101 Query 113 GTTVTWQWT--IHP 124 G W+W HP Sbjct 102 GNATFWEWNSEFHP 115 >gi|300788198|ref|YP_003768489.1| hypothetical protein AMED_6353 [Amycolatopsis mediterranei U32] gi|299797712|gb|ADJ48087.1| conserved hypothetical protein [Amycolatopsis mediterranei U32] Length=140 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 25/80 (32%), Positives = 38/80 (48%), Gaps = 6/80 (7%) Query 46 VRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKW 105 VR+ + +G R+ G R E + +++P R FGY L + PL VA V+ Sbjct 40 VREGEDEPEGLGAVRLFK-TNGVRSYERIVALEPGRRFGYAL-EHGLPLRDYVAYVD--- 94 Query 106 SFAPADTGTTVTWQWTIHPR 125 +P D GT + W T P+ Sbjct 95 -LSPRDGGTDIHWHSTFTPK 113 >gi|317407503|gb|EFV87457.1| radical SAM [Achromobacter xylosoxidans C54] Length=637 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 21/51 (42%), Positives = 29/51 (57%), Gaps = 4/51 (7%) Query 60 RVITMVGGGRVREELTSVDPPRSFGY----TLTDIKGPLAPLVALVEGKWS 106 R+IT++GGG V EL + PR F Y +L + PL L+ V+GK S Sbjct 248 RIITVLGGGFVNTELRELKDPRVFDYFDFVSLDAGERPLLALMEHVQGKRS 298 >gi|340529783|gb|AEK44988.1| hypothetical protein RAM_32575 [Amycolatopsis mediterranei S699] Length=134 Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust. Identities = 25/80 (32%), Positives = 38/80 (48%), Gaps = 6/80 (7%) Query 46 VRDQTGAWDSVGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKW 105 VR+ + +G R+ G R E + +++P R FGY L + PL VA V+ Sbjct 34 VREGEDEPEGLGAVRLFK-TNGVRSYERIVALEPGRRFGYAL-EHGLPLRDYVAYVD--- 88 Query 106 SFAPADTGTTVTWQWTIHPR 125 +P D GT + W T P+ Sbjct 89 -LSPRDGGTDIHWHSTFTPK 107 >gi|311106993|ref|YP_003979846.1| radical SAM superfamily protein 4 [Achromobacter xylosoxidans A8] gi|310761682|gb|ADP17131.1| radical SAM superfamily protein 4 [Achromobacter xylosoxidans A8] Length=630 Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust. Identities = 29/81 (36%), Positives = 38/81 (47%), Gaps = 13/81 (16%) Query 61 VITMVGGGRVREELTSVDPPRSFGY----TLTDIKGPLAPLVALVEGKWS--------FA 108 +IT++GGG V EL + PR F Y TL + PL L+ V+GK S Sbjct 242 IITVLGGGFVNTELRELKDPRVFDYFDYVTLDAGERPLLSLLEHVQGKRSRQRLVRTFLR 301 Query 109 PADTGTTVTWQWTIHPRSALA 129 ADTG V + + P A A Sbjct 302 EADTG-AVRYVNMVEPDIAFA 321 >gi|253996147|ref|YP_003048211.1| hypothetical protein Mmol_0774 [Methylotenera mobilis JLW8] gi|253982826|gb|ACT47684.1| conserved hypothetical protein; putative signal peptide [Methylotenera mobilis JLW8] Length=173 Score = 34.7 bits (78), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/79 (33%), Positives = 37/79 (47%), Gaps = 4/79 (5%) Query 41 PPIKEVRDQTGAWDSVGQARVITMVGGGRVREELTSVD-PPRSFGYTLTDIKGPLAPLVA 99 P I + G VG RV+T GG++ E LTS D ++ Y +T+ P+ A Sbjct 56 PAIAKTEITGGKATEVGATRVLTTQDGGKINEVLTSFDADAKTMKYEITESVLPVREYGA 115 Query 100 LVEGKWSFAPADTGTTVTW 118 ++ K A D TTV W Sbjct 116 TLKVK---ASTDGKTTVVW 131 >gi|108802095|ref|YP_642292.1| hypothetical protein Mmcs_5132 [Mycobacterium sp. MCS] gi|119871248|ref|YP_941200.1| hypothetical protein Mkms_5221 [Mycobacterium sp. KMS] gi|126438076|ref|YP_001073767.1| hypothetical protein Mjls_5513 [Mycobacterium sp. JLS] gi|108772514|gb|ABG11236.1| conserved hypothetical protein [Mycobacterium sp. MCS] gi|119697337|gb|ABL94410.1| conserved hypothetical protein [Mycobacterium sp. KMS] gi|126237876|gb|ABO01277.1| conserved hypothetical protein [Mycobacterium sp. JLS] Length=144 Score = 34.7 bits (78), Expect = 5.0, Method: Compositional matrix adjust. Identities = 29/87 (34%), Positives = 40/87 (46%), Gaps = 13/87 (14%) Query 56 VGQARVITMVGGGRVREELTSVDPPRSFGYTLTDIKGPLAPLVALVEGKWSFAPADTGTT 115 VG R + + G REE+T+ DPP S+ Y + P G +F P+ GT Sbjct 47 VGALRQV-IAAGMWFREEITAYDPPHSYSYRIVRS----VPAFDHEGGTITFTPSGDGTH 101 Query 116 VTWQWTI-HP-------RSALAAPVLP 134 V+W T HP AL+A +LP Sbjct 102 VSWTSTYSHPAYGGGKAMEALSARLLP 128 >gi|53803522|ref|YP_114797.1| MxaD gene product [Methylococcus capsulatus str. Bath] gi|53757283|gb|AAU91574.1| MxaD protein [Methylococcus capsulatus str. Bath] Length=175 Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust. Identities = 21/67 (32%), Positives = 32/67 (48%), Gaps = 2/67 (2%) Query 54 DSVGQARVITMVGGGRVREELTSVDPPR-SFGYTLTDIKGPLAPLVALVEGKWSFAPADT 112 + G R + + GG ++EEL S D + S+ Y +T++ P VA S PA Sbjct 67 NEKGATRELKLKSGGIIKEELKSYDAEKMSYSYKITEVDPKDLP-VANYSSTISVTPAGA 125 Query 113 GTTVTWQ 119 G+ V W Sbjct 126 GSVVEWN 132 >gi|296128121|ref|YP_003635371.1| Polyketide cyclase/dehydrase [Cellulomonas flavigena DSM 20109] gi|296019936|gb|ADG73172.1| Polyketide cyclase/dehydrase [Cellulomonas flavigena DSM 20109] Length=155 Score = 33.9 bits (76), Expect = 7.3, Method: Compositional matrix adjust. Identities = 30/94 (32%), Positives = 43/94 (46%), Gaps = 6/94 (6%) Query 41 PPIKEVRDQTGAWDSVGQARVITMVGGG-RVREELTSVDPPRSFGYTLTDIKGPLAPLVA 99 P I+ R GA R +T+ G R+ E S P + G + ++GP A Sbjct 32 PFIRRQRFLDGATVPAKGVRTLTLHRSGLRMVSEYVSYKLPTNVGMKM--VEGPW--FFA 87 Query 100 LVEGKWSFAPA-DTGTTVTWQWTIHPRSALAAPV 132 ++ G W FAP D GT W+++ R A APV Sbjct 88 VMAGGWRFAPLPDGGTRAVWRYSFTCRPAWLAPV 121 Lambda K H 0.320 0.135 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Effective search space used: 129486540748 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Sep 5, 2011 4:36 AM Number of letters in database: 5,219,829,388 Number of sequences in database: 15,229,318 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Neighboring words threshold: 11 Window for multiple hits: 40